AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0760570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760570 MtrunA17_Chr5g0409311 88.925 307 17 3 1 300 1 297 0.0 532
Msa0760570 MtrunA17_Chr7g0251451 50.673 223 98 3 41 263 41 251 7.04e-73 226
Msa0760570 MtrunA17_Chr7g0270061 48.148 189 96 1 96 282 113 301 3.86e-57 186
Msa0760570 MtrunA17_Chr1g0194601 48.677 189 95 1 96 282 116 304 7.51e-57 185
Msa0760570 MtrunA17_Chr4g0038261 41.799 189 109 1 78 265 31 219 1.41e-47 159
Msa0760570 MtrunA17_Chr4g0034751 40.957 188 111 0 78 265 86 273 5.67e-47 159
Msa0760570 MtrunA17_Chr4g0056771 33.953 215 135 2 55 262 52 266 1.04e-37 135
Msa0760570 MtrunA17_Chr1g0207341 34.270 178 107 2 95 262 159 336 1.15e-28 113
Msa0760570 MtrunA17_Chr4g0055551 36.612 183 108 1 91 265 104 286 1.32e-27 108
Msa0760570 MtrunA17_Chr7g0272191 31.020 245 156 3 50 281 69 313 3.75e-27 108
Msa0760570 MtrunA17_Chr4g0015831 38.525 122 69 2 69 190 6 121 5.47e-24 94.4
Msa0760570 MtrunA17_CPg0492721 38.525 122 69 2 69 190 6 121 5.47e-24 94.4
Msa0760570 MtrunA17_Chr1g0184041 41.463 82 48 0 105 186 100 181 1.65e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760570 AT5G45390.1 80.531 226 40 1 79 300 67 292 3.89e-124 357
Msa0760570 AT1G66670.1 51.596 188 91 0 76 263 70 257 3.33e-65 207
Msa0760570 AT1G02560.1 52.096 167 80 0 96 262 119 285 2.92e-58 189
Msa0760570 AT1G11750.2 41.489 188 110 0 78 265 101 288 5.72e-48 162
Msa0760570 AT1G11750.1 42.458 179 103 0 87 265 92 270 7.62e-48 161
Msa0760570 AT5G23140.1 41.176 187 109 1 78 263 34 220 1.36e-47 160
Msa0760570 ATCG00670.1 41.860 172 99 1 91 261 22 193 5.17e-41 141
Msa0760570 AT1G12410.1 37.209 172 108 0 91 262 89 260 3.66e-39 139
Msa0760570 AT4G17040.1 40.437 183 101 1 91 265 105 287 1.65e-37 135
Msa0760570 AT1G09130.2 32.558 258 154 4 27 264 48 305 1.04e-30 118
Msa0760570 AT1G09130.1 32.558 258 154 4 27 264 48 305 1.04e-30 118
Msa0760570 AT1G49970.1 37.368 190 109 2 86 265 166 355 1.15e-30 119
Msa0760570 AT1G09130.3 32.558 258 154 4 27 264 48 305 2.26e-30 118

Find 102 sgRNAs with CRISPR-Local

Find 509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGGTTAAAGTTTGAATCTT+TGG 0.188035 5_2:-17094794 None:intergenic
TAACAAACTCTGAAAATTTC+AGG 0.194159 5_2:+17101142 Msa0760570:three_prime_UTR
TCAACAAATTTCTCCGTTAC+TGG 0.212003 5_2:-17101216 None:intergenic
TATGAGTCAGTTGTTGCTTT+TGG 0.243942 5_2:+17094972 Msa0760570:CDS
CCAATTGAAGCGGTGGAATA+TGG 0.280288 5_2:+17100880 Msa0760570:CDS
GAGGGAGAGGATTGTGTTCT+TGG 0.280653 5_2:+17094915 Msa0760570:CDS
AGGTGCTGAATCTGATACTA+TGG 0.292860 5_2:+17094882 Msa0760570:CDS
GTACCACTATCTGTCATTAA+AGG 0.292929 5_2:-17101039 None:intergenic
ACGATGCGGTGCAGCTTGTT+AGG 0.301821 5_2:+17100584 Msa0760570:CDS
GCAATCATGATTCGCGTATT+AGG 0.301951 5_2:-17100697 None:intergenic
GGCTAGTATATCTCATCATC+TGG 0.332567 5_2:-17101018 None:intergenic
CTTAAGATTCATCCCCTTGC+GGG 0.340468 5_2:+17101078 Msa0760570:three_prime_UTR
CCATATTCCACCGCTTCAAT+TGG 0.379663 5_2:-17100880 None:intergenic
TTGTGCGAAATTGTGGTTTA+GGG 0.389765 5_2:-17094729 None:intergenic
TTTAGGGTTGAAAGAGGAAA+TGG 0.398119 5_2:-17094713 None:intergenic
ATATGTGGGGTTAGGAAATT+CGG 0.399875 5_2:-17100994 None:intergenic
CATAGCTAGCCGCTTACCTT+TGG 0.404035 5_2:-17100674 None:intergenic
ATTCTCCCGGTGGTTCTCTC+AGG 0.405458 5_2:+17095034 Msa0760570:CDS
GTTGTGCGAAATTGTGGTTT+AGG 0.418001 5_2:-17094730 None:intergenic
ATCTCATCATCTGGGATATG+TGG 0.421816 5_2:-17101009 None:intergenic
AAAAGCTTGATATCTTTAGT+AGG 0.425124 5_2:-17095006 None:intergenic
AGGGAGAGGATTGTGTTCTT+GGG 0.433833 5_2:+17094916 Msa0760570:CDS
AGAGATGGAAGGGAAGTTGA+AGG 0.438406 5_2:-17094655 None:intergenic
TGGGGTTGTTGTTGAGGGAG+AGG 0.446163 5_2:+17094902 Msa0760570:CDS
TTCGCCACAGACTCCGGAAC+GGG 0.447320 5_2:+17094852 Msa0760570:CDS
CATCTGGGATATGTGGGGTT+AGG 0.459650 5_2:-17101002 None:intergenic
TTCTGAGATTGTGAGAGAAA+TGG 0.469386 5_2:-17094585 None:intergenic
AGACATTTGAAAGGTGATAG+TGG 0.471387 5_2:-17094830 None:intergenic
TACTATGGGGTTGTTGTTGA+GGG 0.476471 5_2:+17094897 Msa0760570:CDS
GTTGTGAGGACGCAGTTGAT+TGG 0.483491 5_2:-17094754 None:intergenic
CGATGCGGTGCAGCTTGTTA+GGG 0.488234 5_2:+17100585 Msa0760570:CDS
ATACTATGGGGTTGTTGTTG+AGG 0.489719 5_2:+17094896 Msa0760570:CDS
ATTGGAGTTGTGCGAAATTG+TGG 0.494089 5_2:-17094736 None:intergenic
TGGAATATGGAATTATTGAC+GGG 0.496102 5_2:+17100893 Msa0760570:CDS
TCTGAGATTGTGAGAGAAAT+GGG 0.498878 5_2:-17094584 None:intergenic
TCTCCTGCCAGTGCCAGAAA+AGG 0.502016 5_2:+17100942 Msa0760570:CDS
TTAGGGTTGAAAGAGGAAAT+GGG 0.503293 5_2:-17094712 None:intergenic
ATCATGATTGCTCAACCACC+TGG 0.504852 5_2:+17100709 Msa0760570:CDS
GTGGAATATGGAATTATTGA+CGG 0.506529 5_2:+17100892 Msa0760570:CDS
GACATTTGAAAGGTGATAGT+GGG 0.511184 5_2:-17094829 None:intergenic
TCTCATCATCTGGGATATGT+GGG 0.518650 5_2:-17101008 None:intergenic
TTCAAGTGAGCGGCCGGTGA+AGG 0.524114 5_2:-17100818 None:intergenic
TTGTGGTTTAGGGTTGAAAG+AGG 0.526746 5_2:-17094719 None:intergenic
GATGTATCCACAATTGCAAT+GGG 0.528030 5_2:+17100610 Msa0760570:CDS
GCTTGTCCACTAGCACCTCC+AGG 0.528362 5_2:-17100727 None:intergenic
TCATCCCCTTGCGGGGCTTG+CGG 0.529474 5_2:+17101086 Msa0760570:three_prime_UTR
AATGTCTTCGCCACAGACTC+CGG 0.530994 5_2:+17094846 Msa0760570:CDS
GGTGCTGAATCTGATACTAT+GGG 0.531087 5_2:+17094883 Msa0760570:CDS
ATCCTAGGTGGTGGCACCAA+AGG 0.533029 5_2:+17100658 Msa0760570:CDS
AGTTGAAGGATGAGAAAGAG+AGG 0.534319 5_2:-17094641 None:intergenic
TCAACAGCCTCAATTATCCT+AGG 0.535750 5_2:+17100643 Msa0760570:CDS
ATCTAACCTGAGAGAACCAC+CGG 0.535853 5_2:-17095040 None:intergenic
TGCAATGCCCATTGCAATTG+TGG 0.538622 5_2:-17100617 None:intergenic
GTTAAAGTTTGAATCTTTGG+AGG 0.539062 5_2:-17094791 None:intergenic
TAGCCTTTAATGACAGATAG+TGG 0.543326 5_2:+17101036 Msa0760570:exon
CAACCACCTGGAGGTGCTAG+TGG 0.544933 5_2:+17100721 Msa0760570:CDS
GGATGTATCCACAATTGCAA+TGG 0.545256 5_2:+17100609 Msa0760570:CDS
AACTTGTTCAAGTGAGCGGC+CGG 0.548501 5_2:-17100824 None:intergenic
CCTGCCAGTGCCAGAAAAGG+TGG 0.557724 5_2:+17100945 Msa0760570:CDS
AAGTTCTGAAAGATATCGAT+AGG 0.559233 5_2:+17100842 Msa0760570:CDS
AGAATCATATCTTCCTTCAC+CGG 0.560830 5_2:+17100805 Msa0760570:CDS
GCGTTGTGAGAGAGATGGAA+GGG 0.566049 5_2:-17094665 None:intergenic
GCCTCAATTATCCTAGGTGG+TGG 0.568197 5_2:+17100649 Msa0760570:CDS
GTATACCGCAAGCCCCGCAA+GGG 0.570638 5_2:-17101091 None:intergenic
TGCGTTGTGAGAGAGATGGA+AGG 0.571466 5_2:-17094666 None:intergenic
TCAGAACTTGTTCAAGTGAG+CGG 0.571992 5_2:-17100828 None:intergenic
ATTTCAGGCTTATTGTGTGT+AGG 0.572108 5_2:+17101157 Msa0760570:three_prime_UTR
TTAAAGTTTGAATCTTTGGA+GGG 0.574541 5_2:-17094790 None:intergenic
GCTAGTATATCTCATCATCT+GGG 0.591085 5_2:-17101017 None:intergenic
TGCGGTGCAGCTTGTTAGGG+CGG 0.594116 5_2:+17100588 Msa0760570:CDS
GGTTAGGAAATTCGGATCAT+CGG 0.597525 5_2:-17100986 None:intergenic
TTAAGATTCATCCCCTTGCG+GGG 0.601335 5_2:+17101079 Msa0760570:three_prime_UTR
TCTGTCTCCAATTGAAGCGG+TGG 0.605778 5_2:+17100873 Msa0760570:CDS
TAGTAGTTAAGACAAAAGAA+AGG 0.610731 5_2:-17101259 None:intergenic
GCCACCACCTAGGATAATTG+AGG 0.619826 5_2:-17100650 None:intergenic
AGTTCTGAAAGATATCGATA+GGG 0.622080 5_2:+17100843 Msa0760570:CDS
CTTCGCCACAGACTCCGGAA+CGG 0.629055 5_2:+17094851 Msa0760570:CDS
ACTTAAGATTCATCCCCTTG+CGG 0.632344 5_2:+17101077 Msa0760570:three_prime_UTR
ATATCTGTCTCCAATTGAAG+CGG 0.641626 5_2:+17100870 Msa0760570:CDS
TTTCAACTGTGATCCAGTAA+CGG 0.642513 5_2:+17101203 Msa0760570:three_prime_UTR
AAAGACAAATAAAACTGCCA+CGG 0.646339 5_2:-17101183 None:intergenic
ACTCCGGAACGGGCTATGAG+AGG 0.646659 5_2:+17094862 Msa0760570:CDS
GGAATGCGTTGTGAGAGAGA+TGG 0.647598 5_2:-17094670 None:intergenic
TATACCGCAAGCCCCGCAAG+GGG 0.649933 5_2:-17101090 None:intergenic
CTGTGGCGAAGACATTTGAA+AGG 0.650019 5_2:-17094839 None:intergenic
TTTAATGACAGATAGTGGTA+CGG 0.652645 5_2:+17101041 Msa0760570:three_prime_UTR
CACCGCATCGTAGATAGCCA+TGG 0.659168 5_2:-17100572 None:intergenic
CATGCACAACAAGAATAATG+TGG 0.660731 5_2:+17100780 Msa0760570:CDS
TACCTTTGGTGCCACCACCT+AGG 0.667716 5_2:-17100660 None:intergenic
GGGTTGAAAGAGGAAATGGG+TGG 0.670632 5_2:-17094709 None:intergenic
CTCATCATCTGGGATATGTG+GGG 0.671388 5_2:-17101007 None:intergenic
ACAGCCTCAATTATCCTAGG+TGG 0.682148 5_2:+17100646 Msa0760570:CDS
AAGCACCACAACTCTCACAA+TGG 0.683599 5_2:+17094606 Msa0760570:exon
TAAATCCATTGTGAGAGTTG+TGG 0.688461 5_2:-17094611 None:intergenic
TTATTGTGTGTAGGATGCCG+TGG 0.690230 5_2:+17101166 Msa0760570:three_prime_UTR
ATGATTGCTCAACCACCTGG+AGG 0.694109 5_2:+17100712 Msa0760570:CDS
TACCATGGCTATCTACGATG+CGG 0.697296 5_2:+17100570 Msa0760570:CDS
GTGGTGGCACCAAAGGTAAG+CGG 0.702250 5_2:+17100665 Msa0760570:CDS
TGTCCACTAGCACCTCCAGG+TGG 0.704733 5_2:-17100724 None:intergenic
TCTAACCTGAGAGAACCACC+GGG 0.719517 5_2:-17095039 None:intergenic
GGAATATGGAATTATTGACG+GGG 0.741752 5_2:+17100894 Msa0760570:CDS
GTGCTGAATCTGATACTATG+GGG 0.761004 5_2:+17094884 Msa0760570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATAAAATTAATTGATTATT+TGG - chr5_2:17095329-17095348 None:intergenic 10.0%
!! CAAATTATAATTATAAGAAA+AGG - chr5_2:17095445-17095464 None:intergenic 10.0%
!! ATATTTCAAAAAAAGTTAAA+TGG + chr5_2:17095995-17096014 Msa0760570:intron 10.0%
!! TATTTCAAAAAAAGTTAAAT+GGG + chr5_2:17095996-17096015 Msa0760570:intron 10.0%
!!! TATCGTTATTAATTTTTTTT+TGG + chr5_2:17096647-17096666 Msa0760570:intron 10.0%
!!! ATCGTTATTAATTTTTTTTT+GGG + chr5_2:17096648-17096667 Msa0760570:intron 10.0%
!!! ATATTATTTTAGGAATTAAA+TGG + chr5_2:17096909-17096928 Msa0760570:intron 10.0%
!!! ATTAGCTTTTTATATTTATA+GGG - chr5_2:17099106-17099125 None:intergenic 10.0%
!!! TATTAGCTTTTTATATTTAT+AGG - chr5_2:17099107-17099126 None:intergenic 10.0%
!!! TTTTATCTTTTATATAAAAC+CGG + chr5_2:17100142-17100161 Msa0760570:intron 10.0%
!! TAAAGGTTTATGAAAATTAT+TGG + chr5_2:17095131-17095150 Msa0760570:intron 15.0%
!! TAACAAATAACAAACAAATA+AGG - chr5_2:17095488-17095507 None:intergenic 15.0%
!! ATTTCAAAAAAAGTTAAATG+GGG + chr5_2:17095997-17096016 Msa0760570:intron 15.0%
!! TTAATAACGATAACATAAAA+AGG - chr5_2:17096639-17096658 None:intergenic 15.0%
!!! TCGTTATTAATTTTTTTTTG+GGG + chr5_2:17096649-17096668 Msa0760570:intron 15.0%
!!! TTAATATGGGATATTATTTT+AGG + chr5_2:17096899-17096918 Msa0760570:intron 15.0%
!! AATATAATAGTATAAAATGC+TGG - chr5_2:17097372-17097391 None:intergenic 15.0%
!!! TTATATTTTATTCAATGTGA+TGG + chr5_2:17097385-17097404 Msa0760570:intron 15.0%
!!! CTTTTAAAGAATTTTTTTAG+AGG - chr5_2:17097818-17097837 None:intergenic 15.0%
!! TTTAAAAGTAAAATTGAAGT+AGG + chr5_2:17097830-17097849 Msa0760570:intron 15.0%
!! TGGTAATATATTAATACAAA+TGG - chr5_2:17097944-17097963 None:intergenic 15.0%
!! TTTGATATTACAAATCATTT+GGG - chr5_2:17098810-17098829 None:intergenic 15.0%
!! ATTTGATATTACAAATCATT+TGG - chr5_2:17098811-17098830 None:intergenic 15.0%
!! AATATAAAAAGCTAATAGAA+AGG + chr5_2:17099110-17099129 Msa0760570:intron 15.0%
!! TAATACAACATAAAAATAAC+AGG + chr5_2:17099917-17099936 Msa0760570:intron 15.0%
!! AATACAACATAAAAATAACA+GGG + chr5_2:17099918-17099937 Msa0760570:intron 15.0%
!! ATTAATAACAAGTTAACAAA+AGG - chr5_2:17100438-17100457 None:intergenic 15.0%
!! GAGACTAATGAAAAATTAAA+GGG - chr5_2:17095358-17095377 None:intergenic 20.0%
!! AGAGACTAATGAAAAATTAA+AGG - chr5_2:17095359-17095378 None:intergenic 20.0%
!! TATCAACACAAGTTTAATAT+CGG - chr5_2:17095548-17095567 None:intergenic 20.0%
!! AAAAAAAAACGTTAACAGAA+AGG + chr5_2:17095604-17095623 Msa0760570:intron 20.0%
!! TAGTAACGAAACAAAAAATA+GGG + chr5_2:17095635-17095654 Msa0760570:intron 20.0%
!!! AACTATAATTTGTACCAATT+TGG - chr5_2:17095746-17095765 None:intergenic 20.0%
!! AATTGGTACAAATTATAGTT+AGG + chr5_2:17095746-17095765 Msa0760570:intron 20.0%
!! CTTAATTGATTGTCTTAATT+TGG - chr5_2:17095776-17095795 None:intergenic 20.0%
!! TAAGACAATCAATTAAGTTA+AGG + chr5_2:17095779-17095798 Msa0760570:intron 20.0%
!! AAGACAATCAATTAAGTTAA+GGG + chr5_2:17095780-17095799 Msa0760570:intron 20.0%
!!! CGTTATTAATTTTTTTTTGG+GGG + chr5_2:17096650-17096669 Msa0760570:intron 20.0%
!! TTGCTAAGAAAATACTTAAT+TGG + chr5_2:17096764-17096783 Msa0760570:intron 20.0%
!!! TCGTAGATATTTTTAAATTG+CGG - chr5_2:17097010-17097029 None:intergenic 20.0%
!! TTAATATATTACCAAACCTT+AGG + chr5_2:17097950-17097969 Msa0760570:intron 20.0%
!! ATTATTGGATGAATTTCATT+TGG - chr5_2:17098165-17098184 None:intergenic 20.0%
!! AATCGTTATAGAGAAAAATT+AGG + chr5_2:17098253-17098272 Msa0760570:intron 20.0%
!!! AATGACTAATGTTTTTTTCT+TGG + chr5_2:17098378-17098397 Msa0760570:intron 20.0%
!! AAGGTAAAAAAACATAGAAA+TGG - chr5_2:17098583-17098602 None:intergenic 20.0%
!! GATAGTAATAATAAAGTTTG+TGG + chr5_2:17099066-17099085 Msa0760570:intron 20.0%
!! ATAACAATATCTCAACAATA+TGG + chr5_2:17099167-17099186 Msa0760570:intron 20.0%
!! TAACAATATCTCAACAATAT+GGG + chr5_2:17099168-17099187 Msa0760570:intron 20.0%
!!! CTTTAATTTTAGGAGATTTT+AGG + chr5_2:17099199-17099218 Msa0760570:intron 20.0%
!! GATATTCTATTGAATAACAT+GGG + chr5_2:17099235-17099254 Msa0760570:intron 20.0%
!!! GTTTGCTGTTATTTATTATT+TGG + chr5_2:17099282-17099301 Msa0760570:intron 20.0%
!! TTCATCTAATAATGATTACT+CGG + chr5_2:17099372-17099391 Msa0760570:intron 20.0%
!!! AAAAAAACTTTTCATCTAAC+TGG - chr5_2:17099427-17099446 None:intergenic 20.0%
!! AAAAACAAAAAAACAGCTAA+AGG - chr5_2:17099454-17099473 None:intergenic 20.0%
!!! AAGTGAAAAATGAAATTTTC+TGG + chr5_2:17100118-17100137 Msa0760570:intron 20.0%
!!! AGTGAAAAATGAAATTTTCT+GGG + chr5_2:17100119-17100138 Msa0760570:intron 20.0%
! TTAAAGTTTGAATCTTTGGA+GGG - chr5_2:17094793-17094812 None:intergenic 25.0%
! AAAAGCTTGATATCTTTAGT+AGG - chr5_2:17095009-17095028 None:intergenic 25.0%
! TATTGGAATTGTATGTGATA+AGG + chr5_2:17095148-17095167 Msa0760570:intron 25.0%
!!! TTATTTGGTTTGATGAAACA+AGG - chr5_2:17095314-17095333 None:intergenic 25.0%
! CTAATGAAAAATTAAAGGGA+AGG - chr5_2:17095354-17095373 None:intergenic 25.0%
!! ATTTGTTAACTATAGTAACG+TGG + chr5_2:17095500-17095519 Msa0760570:intron 25.0%
! TTTGTTAACTATAGTAACGT+GGG + chr5_2:17095501-17095520 Msa0760570:intron 25.0%
!!! TGTTGATAGTGATAACTTTA+TGG + chr5_2:17095560-17095579 Msa0760570:intron 25.0%
! CTAGTAACGAAACAAAAAAT+AGG + chr5_2:17095634-17095653 Msa0760570:intron 25.0%
! AAAGTGAAAAAATATCAGCA+AGG - chr5_2:17095882-17095901 None:intergenic 25.0%
! ATCATCTCTCTATATAAGTA+AGG - chr5_2:17095948-17095967 None:intergenic 25.0%
! AACTATATATGACTTAGAGT+TGG + chr5_2:17096533-17096552 Msa0760570:intron 25.0%
! ATTGTGAAGATAAGGTTAAA+GGG + chr5_2:17096580-17096599 Msa0760570:intron 25.0%
! AAAGGATTGTGTGTTTAATA+TGG + chr5_2:17096885-17096904 Msa0760570:intron 25.0%
! AAGGATTGTGTGTTTAATAT+GGG + chr5_2:17096886-17096905 Msa0760570:intron 25.0%
! TATCAGAATCAATATGAAAC+AGG - chr5_2:17097112-17097131 None:intergenic 25.0%
! ATTCATTAGATTGTTAGTGA+TGG + chr5_2:17097322-17097341 Msa0760570:intron 25.0%
! TAATAGTATAAAATGCTGGA+GGG - chr5_2:17097368-17097387 None:intergenic 25.0%
! ATAATAGTATAAAATGCTGG+AGG - chr5_2:17097369-17097388 None:intergenic 25.0%
!!! GTCCTTTTTGAAGTATTTTA+CGG + chr5_2:17097500-17097519 Msa0760570:intron 25.0%
!!! TCCTTTTTGAAGTATTTTAC+GGG + chr5_2:17097501-17097520 Msa0760570:intron 25.0%
! AATTGAAGTAGGAAAATATG+TGG + chr5_2:17097841-17097860 Msa0760570:intron 25.0%
! ATTGAAGTAGGAAAATATGT+GGG + chr5_2:17097842-17097861 Msa0760570:intron 25.0%
! ATGACATGTATTAGAACAAA+AGG + chr5_2:17098031-17098050 Msa0760570:intron 25.0%
! TTCATCCAATAATAGTGTTA+AGG + chr5_2:17098172-17098191 Msa0760570:intron 25.0%
! ATATTCTACCATCTCTATAA+TGG - chr5_2:17098285-17098304 None:intergenic 25.0%
!! TGGTAGAATATCTTTTTACA+TGG + chr5_2:17098294-17098313 Msa0760570:intron 25.0%
!!! AGAATAGTTTTAGCAAGTTA+AGG - chr5_2:17098602-17098621 None:intergenic 25.0%
! TAAGTCATAGATTGTAAATC+AGG + chr5_2:17098918-17098937 Msa0760570:intron 25.0%
!!! GGAACTCTAACTTTAATTTT+AGG + chr5_2:17099189-17099208 Msa0760570:intron 25.0%
! GGATATTCTATTGAATAACA+TGG + chr5_2:17099234-17099253 Msa0760570:intron 25.0%
! AAGGAAATGAAACAGATATA+TGG - chr5_2:17099536-17099555 None:intergenic 25.0%
! ACTAGCTCAAAATGAAATTA+AGG - chr5_2:17099555-17099574 None:intergenic 25.0%
! AACATAAAAATAACAGGGTA+TGG + chr5_2:17099923-17099942 Msa0760570:intron 25.0%
! ACATAAAAATAACAGGGTAT+GGG + chr5_2:17099924-17099943 Msa0760570:intron 25.0%
!! AAACACAAAAACAGAGTATT+AGG + chr5_2:17099957-17099976 Msa0760570:intron 25.0%
! AAATAAGTCAGTTGTGAAAA+AGG - chr5_2:17100526-17100545 None:intergenic 25.0%
!! TAACAAACTCTGAAAATTTC+AGG + chr5_2:17101142-17101161 Msa0760570:three_prime_UTR 25.0%
! TAGTAGTTAAGACAAAAGAA+AGG - chr5_2:17101262-17101281 None:intergenic 25.0%
GTTAAAGTTTGAATCTTTGG+AGG - chr5_2:17094794-17094813 None:intergenic 30.0%
! AAGCTTTTTATCAATTCTCC+CGG + chr5_2:17095021-17095040 Msa0760570:CDS 30.0%
AATGTGTAAAATATGTGCCT+TGG + chr5_2:17095101-17095120 Msa0760570:intron 30.0%
TAAAATATGTGCCTTGGAAT+TGG + chr5_2:17095107-17095126 Msa0760570:intron 30.0%
TAAACCTTTATCCAATTCCA+AGG - chr5_2:17095121-17095140 None:intergenic 30.0%
TTGTATGTGATAAGGTAGAT+TGG + chr5_2:17095156-17095175 Msa0760570:intron 30.0%
TGTATGTGATAAGGTAGATT+GGG + chr5_2:17095157-17095176 Msa0760570:intron 30.0%
! ATTTCCCAAAAATTTTGTGC+AGG - chr5_2:17095232-17095251 None:intergenic 30.0%
! TAGGGTATTTCAGTATACAT+AGG - chr5_2:17095275-17095294 None:intergenic 30.0%
ACTTAAAAGATCACCAATAG+AGG - chr5_2:17095415-17095434 None:intergenic 30.0%
!! TCTATTGGTGATCTTTTAAG+TGG + chr5_2:17095414-17095433 Msa0760570:intron 30.0%
ACAAAAAATAGGGACCAAAT+TGG + chr5_2:17095645-17095664 Msa0760570:intron 30.0%
CGTTAACTTATGTACCAATT+TGG - chr5_2:17095662-17095681 None:intergenic 30.0%
TTTGAGAGAAACTAACAGAA+AGG + chr5_2:17095687-17095706 Msa0760570:intron 30.0%
AGTAACAAAGCAAAACATAG+AGG + chr5_2:17095719-17095738 Msa0760570:intron 30.0%
CAAACGCTAACAATAAAGTT+AGG - chr5_2:17095824-17095843 None:intergenic 30.0%
!! AGCGTTTGATAGTGTTTATT+TGG + chr5_2:17095836-17095855 Msa0760570:intron 30.0%
!! GCGTTTGATAGTGTTTATTT+GGG + chr5_2:17095837-17095856 Msa0760570:intron 30.0%
! GACTACTATTTTCTCATTCA+GGG - chr5_2:17096039-17096058 None:intergenic 30.0%
! TGACTACTATTTTCTCATTC+AGG - chr5_2:17096040-17096059 None:intergenic 30.0%
TTTGCAATTTATCTGCATTC+AGG + chr5_2:17096229-17096248 Msa0760570:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG + chr5_2:17096230-17096249 Msa0760570:intron 30.0%
TTAATCCCTGAATAGGAAAT+GGG - chr5_2:17096269-17096288 None:intergenic 30.0%
TTTAATCCCTGAATAGGAAA+TGG - chr5_2:17096270-17096289 None:intergenic 30.0%
AATCTCCTAAAGATAAACTG+TGG + chr5_2:17096296-17096315 Msa0760570:intron 30.0%
ATATGACTTAGAGTTGGATA+AGG + chr5_2:17096539-17096558 Msa0760570:intron 30.0%
TATGACTTAGAGTTGGATAA+GGG + chr5_2:17096540-17096559 Msa0760570:intron 30.0%
GATTGTGAAGATAAGGTTAA+AGG + chr5_2:17096579-17096598 Msa0760570:intron 30.0%
!! TTGGTAATGAAATAGAGAAG+AGG + chr5_2:17096603-17096622 Msa0760570:intron 30.0%
! TGGTAATGAAATAGAGAAGA+GGG + chr5_2:17096604-17096623 Msa0760570:intron 30.0%
GGGAAAATAAGTATATGAGA+AGG + chr5_2:17096670-17096689 Msa0760570:intron 30.0%
! AAGGATAACTGACCAATTTT+GGG + chr5_2:17096689-17096708 Msa0760570:intron 30.0%
CATGAATAACAAGTTGTGAT+TGG + chr5_2:17096857-17096876 Msa0760570:intron 30.0%
ATAACAAGTTGTGATTGGAT+AGG + chr5_2:17096862-17096881 Msa0760570:intron 30.0%
! GAAACATTATTAGCTCTCAT+TGG - chr5_2:17096967-17096986 None:intergenic 30.0%
TTAAATTGCGGTTACAAAGT+GGG - chr5_2:17096998-17097017 None:intergenic 30.0%
TTTAAATTGCGGTTACAAAG+TGG - chr5_2:17096999-17097018 None:intergenic 30.0%
!! GTTTTCCTCTAGTTTAATTC+AGG + chr5_2:17097432-17097451 Msa0760570:intron 30.0%
CATTTCCTGAATTAAACTAG+AGG - chr5_2:17097440-17097459 None:intergenic 30.0%
TCCCGTAAAATACTTCAAAA+AGG - chr5_2:17097505-17097524 None:intergenic 30.0%
!!! TTTTTGAAGTATTTTACGGG+AGG + chr5_2:17097504-17097523 Msa0760570:intron 30.0%
AGATATAAGTTCCTGATAAG+TGG - chr5_2:17097539-17097558 None:intergenic 30.0%
! ATGTGCTATTCTTTCAAAGA+TGG - chr5_2:17097636-17097655 None:intergenic 30.0%
TGATTTCTCTTATACTCTTG+AGG + chr5_2:17097720-17097739 Msa0760570:intron 30.0%
GATTTCTCTTATACTCTTGA+GGG + chr5_2:17097721-17097740 Msa0760570:intron 30.0%
TTGAAGTAGGAAAATATGTG+GGG + chr5_2:17097843-17097862 Msa0760570:intron 30.0%
! AAATGGATTTGTACTTGCAT+TGG - chr5_2:17097927-17097946 None:intergenic 30.0%
TTTAAGAATGTGTGCTTCAA+AGG - chr5_2:17097992-17098011 None:intergenic 30.0%
! TTTGAAGCACACATTCTTAA+AGG + chr5_2:17097991-17098010 Msa0760570:intron 30.0%
ATACATGTCATATACAAGCA+AGG - chr5_2:17098022-17098041 None:intergenic 30.0%
AAAGGATTATGCATTTAGTC+TGG + chr5_2:17098049-17098068 Msa0760570:intron 30.0%
TCCAATAATAGTGTTAAGGA+TGG + chr5_2:17098176-17098195 Msa0760570:intron 30.0%
ACCATCCTTAACACTATTAT+TGG - chr5_2:17098180-17098199 None:intergenic 30.0%
TGGTTTAAACATGTATAGAG+TGG + chr5_2:17098314-17098333 Msa0760570:intron 30.0%
AATAATTACTAGCAGTAGCA+TGG - chr5_2:17098659-17098678 None:intergenic 30.0%
ACTGCTAGTAATTATTGCTT+TGG + chr5_2:17098663-17098682 Msa0760570:intron 30.0%
ACAAAAAGACAGAACGAAAA+TGG - chr5_2:17098732-17098751 None:intergenic 30.0%
! GAAGTATGCACTTGATATTT+TGG + chr5_2:17098889-17098908 Msa0760570:intron 30.0%
TCTAAACTGAAATGTGGTTA+GGG + chr5_2:17098947-17098966 Msa0760570:intron 30.0%
! AAAACTTTTCATCTAACTGG+AGG - chr5_2:17099424-17099443 None:intergenic 30.0%
!! CTTGGTTTTCATTACTAGAA+TGG - chr5_2:17099498-17099517 None:intergenic 30.0%
CATTCTAGTAATGAAAACCA+AGG + chr5_2:17099496-17099515 Msa0760570:intron 30.0%
AAAACCAAGGTCATATTGAA+AGG + chr5_2:17099509-17099528 Msa0760570:intron 30.0%
AAACCAAGGTCATATTGAAA+GGG + chr5_2:17099510-17099529 Msa0760570:intron 30.0%
! TAGTGTCTATTCTTTTTGAC+TGG + chr5_2:17099571-17099590 Msa0760570:intron 30.0%
GAGAACATATCTATCTATGT+TGG - chr5_2:17099612-17099631 None:intergenic 30.0%
! TCATTCGTGTTCTTTAAGTT+TGG + chr5_2:17099630-17099649 Msa0760570:intron 30.0%
ATATGATTGTGTGTGTGTAT+GGG - chr5_2:17099809-17099828 None:intergenic 30.0%
TATATGATTGTGTGTGTGTA+TGG - chr5_2:17099810-17099829 None:intergenic 30.0%
! ACAAAAACAGAGTATTAGGT+GGG + chr5_2:17099961-17099980 Msa0760570:intron 30.0%
AACTAAACAGATGACTGTTT+AGG + chr5_2:17100383-17100402 Msa0760570:intron 30.0%
!!! TTTTTTGTTTAGTGCTACCA+TGG + chr5_2:17100555-17100574 Msa0760570:intron 30.0%
!! AAGTTCTGAAAGATATCGAT+AGG + chr5_2:17100842-17100861 Msa0760570:CDS 30.0%
!! AGTTCTGAAAGATATCGATA+GGG + chr5_2:17100843-17100862 Msa0760570:CDS 30.0%
GTGGAATATGGAATTATTGA+CGG + chr5_2:17100892-17100911 Msa0760570:CDS 30.0%
TGGAATATGGAATTATTGAC+GGG + chr5_2:17100893-17100912 Msa0760570:CDS 30.0%
! TTTAATGACAGATAGTGGTA+CGG + chr5_2:17101041-17101060 Msa0760570:three_prime_UTR 30.0%
! TACCACATTTTAGGCAAAAA+AGG + chr5_2:17101111-17101130 Msa0760570:three_prime_UTR 30.0%
AAAGACAAATAAAACTGCCA+CGG - chr5_2:17101186-17101205 None:intergenic 30.0%
! TCTGAGATTGTGAGAGAAAT+GGG - chr5_2:17094587-17094606 None:intergenic 35.0%
!! TTCTGAGATTGTGAGAGAAA+TGG - chr5_2:17094588-17094607 None:intergenic 35.0%
TAAATCCATTGTGAGAGTTG+TGG - chr5_2:17094614-17094633 None:intergenic 35.0%
!!! AATGGGTGGTTTTGAAAAGA+GGG - chr5_2:17094698-17094717 None:intergenic 35.0%
!!! AAATGGGTGGTTTTGAAAAG+AGG - chr5_2:17094699-17094718 None:intergenic 35.0%
TTAGGGTTGAAAGAGGAAAT+GGG - chr5_2:17094715-17094734 None:intergenic 35.0%
! TTTAGGGTTGAAAGAGGAAA+TGG - chr5_2:17094716-17094735 None:intergenic 35.0%
TTGTGCGAAATTGTGGTTTA+GGG - chr5_2:17094732-17094751 None:intergenic 35.0%
GGGGTTAAAGTTTGAATCTT+TGG - chr5_2:17094797-17094816 None:intergenic 35.0%
!!! ATAGTGGGTTTTTGAAGTTG+GGG - chr5_2:17094817-17094836 None:intergenic 35.0%
!!! GATAGTGGGTTTTTGAAGTT+GGG - chr5_2:17094818-17094837 None:intergenic 35.0%
!!! TGATAGTGGGTTTTTGAAGT+TGG - chr5_2:17094819-17094838 None:intergenic 35.0%
GACATTTGAAAGGTGATAGT+GGG - chr5_2:17094832-17094851 None:intergenic 35.0%
AGACATTTGAAAGGTGATAG+TGG - chr5_2:17094833-17094852 None:intergenic 35.0%
!!! TATGAGTCAGTTGTTGCTTT+TGG + chr5_2:17094972-17094991 Msa0760570:CDS 35.0%
TTTGATGAAACAAGGAGGAA+GGG - chr5_2:17095306-17095325 None:intergenic 35.0%
!! TTTGGTTTGATGAAACAAGG+AGG - chr5_2:17095311-17095330 None:intergenic 35.0%
GGAATGAAGAGAAGAATGAA+GGG - chr5_2:17095394-17095413 None:intergenic 35.0%
AGGAATGAAGAGAAGAATGA+AGG - chr5_2:17095395-17095414 None:intergenic 35.0%
TCTTCTCTTCATTCCTCTAT+TGG + chr5_2:17095399-17095418 Msa0760570:intron 35.0%
ACACAAGTTTAATATCGGCA+AGG - chr5_2:17095543-17095562 None:intergenic 35.0%
CAAAACATAGAGGACCAAAT+TGG + chr5_2:17095729-17095748 Msa0760570:intron 35.0%
GTTAGGCTTATTCAATCACT+CGG - chr5_2:17095807-17095826 None:intergenic 35.0%
TTGCAATTTCTCTGCATTCA+GGG - chr5_2:17096070-17096089 None:intergenic 35.0%
TTTGCAATTTCTCTGCATTC+AGG - chr5_2:17096071-17096090 None:intergenic 35.0%
! AGACTCTGTTGGTAAATTTC+AGG + chr5_2:17096106-17096125 Msa0760570:intron 35.0%
! GACTCTGTTGGTAAATTTCA+GGG + chr5_2:17096107-17096126 Msa0760570:intron 35.0%
ACTAACAGAGTCTACATTCA+GGG + chr5_2:17096202-17096221 Msa0760570:intron 35.0%
! AGTCACTTTAATCCCTGAAT+AGG - chr5_2:17096276-17096295 None:intergenic 35.0%
GTTCTCCACAGTTTATCTTT+AGG - chr5_2:17096304-17096323 None:intergenic 35.0%
AGCCAGAAAAATTGGATAGT+GGG - chr5_2:17096411-17096430 None:intergenic 35.0%
TACTGATAAGACTAAAGGGT+TGG + chr5_2:17096435-17096454 Msa0760570:intron 35.0%
TAAGGGTTTATGAGAGTTGT+TGG + chr5_2:17096557-17096576 Msa0760570:intron 35.0%
GTTGTTGGATTGTGAAGATA+AGG + chr5_2:17096572-17096591 Msa0760570:intron 35.0%
TGAAGATAAGGTTAAAGGGT+TGG + chr5_2:17096584-17096603 Msa0760570:intron 35.0%
GGTAATGAAATAGAGAAGAG+GGG + chr5_2:17096605-17096624 Msa0760570:intron 35.0%
! GAAGGATAACTGACCAATTT+TGG + chr5_2:17096688-17096707 Msa0760570:intron 35.0%
! AGGATAACTGACCAATTTTG+GGG + chr5_2:17096690-17096709 Msa0760570:intron 35.0%
AACGGACATGTAACGTAAAA+AGG + chr5_2:17096827-17096846 Msa0760570:intron 35.0%
AAGTTGTGATTGGATAGGAA+AGG + chr5_2:17096867-17096886 Msa0760570:intron 35.0%
ATTAAATGGAGATGCACTGT+CGG + chr5_2:17096923-17096942 Msa0760570:intron 35.0%
CTCTCATTGGATGTCTTATA+TGG - chr5_2:17096954-17096973 None:intergenic 35.0%
ACTAGAGGAAAACTGTAATG+TGG - chr5_2:17097425-17097444 None:intergenic 35.0%
! GGATATTTTGTCCACTTATC+AGG + chr5_2:17097525-17097544 Msa0760570:intron 35.0%
TGTGTGTCTTTCATAAGAAG+AGG - chr5_2:17097576-17097595 None:intergenic 35.0%
TTGACTAAGTTACTTGAGAG+CGG + chr5_2:17097655-17097674 Msa0760570:intron 35.0%
TCAGTATTTGTGTTCGTTGT+TGG + chr5_2:17097755-17097774 Msa0760570:intron 35.0%
TGAAGTAGGAAAATATGTGG+GGG + chr5_2:17097844-17097863 Msa0760570:intron 35.0%
TCCATAACACAATCTACTGT+TGG + chr5_2:17098094-17098113 Msa0760570:intron 35.0%
CCATAACACAATCTACTGTT+GGG + chr5_2:17098095-17098114 Msa0760570:intron 35.0%
!!! ACTGTTGGGTTGAATTTTAC+AGG + chr5_2:17098109-17098128 Msa0760570:intron 35.0%
!!! CTGTTGGGTTGAATTTTACA+GGG + chr5_2:17098110-17098129 Msa0760570:intron 35.0%
!! GCAACTGACTCTTTTTGTAT+GGG - chr5_2:17098138-17098157 None:intergenic 35.0%
!! TGCAACTGACTCTTTTTGTA+TGG - chr5_2:17098139-17098158 None:intergenic 35.0%
TGTTAAGGATGGTCTAAACA+TGG + chr5_2:17098187-17098206 Msa0760570:intron 35.0%
GCTAGTAATTATTGCTTTGG+TGG + chr5_2:17098666-17098685 Msa0760570:intron 35.0%
! TTTGGTGGTTTGAATGAAAG+CGG + chr5_2:17098681-17098700 Msa0760570:intron 35.0%
AAATCATTTGGGAAACTCTG+GGG - chr5_2:17098799-17098818 None:intergenic 35.0%
CAAATCATTTGGGAAACTCT+GGG - chr5_2:17098800-17098819 None:intergenic 35.0%
ACAAATCATTTGGGAAACTC+TGG - chr5_2:17098801-17098820 None:intergenic 35.0%
TCATAAGATTTCGTGGATAC+AGG - chr5_2:17098834-17098853 None:intergenic 35.0%
TCCACGAAATCTTATGAAAG+CGG + chr5_2:17098837-17098856 Msa0760570:intron 35.0%
CTTGTATTGCTATCTCTCAA+AGG + chr5_2:17098867-17098886 Msa0760570:intron 35.0%
!! GTATGCACTTGATATTTTGG+AGG + chr5_2:17098892-17098911 Msa0760570:intron 35.0%
TCAGAGTCTAAACTGAAATG+TGG + chr5_2:17098941-17098960 Msa0760570:intron 35.0%
GTCTAAACTGAAATGTGGTT+AGG + chr5_2:17098946-17098965 Msa0760570:intron 35.0%
TCAAGTAGATATCATAACCC+TGG - chr5_2:17099024-17099043 None:intergenic 35.0%
AAGCTAATAGAAAGGAGAGA+AGG + chr5_2:17099118-17099137 Msa0760570:intron 35.0%
!!! TTTAGGAGATTTTAGGACGT+TGG + chr5_2:17099206-17099225 Msa0760570:intron 35.0%
! ATAACATGGGAAAGACCTTT+TGG + chr5_2:17099248-17099267 Msa0760570:intron 35.0%
AAACATAGCACACAACCAAA+AGG - chr5_2:17099266-17099285 None:intergenic 35.0%
!! TATTATTTGGTGCCCATAGT+TGG + chr5_2:17099295-17099314 Msa0760570:intron 35.0%
GTCTCGTACATATAAACCAA+AGG - chr5_2:17099402-17099421 None:intergenic 35.0%
! CGTGTTCTTTAAGTTTGGAT+TGG + chr5_2:17099635-17099654 Msa0760570:intron 35.0%
TAATGATCCTCTATGCTGTT+AGG + chr5_2:17099660-17099679 Msa0760570:intron 35.0%
ATTCGTAAGAATCCACTCAA+CGG + chr5_2:17099769-17099788 Msa0760570:intron 35.0%
! ATTACAATTTTGCCGTTGAG+TGG - chr5_2:17099784-17099803 None:intergenic 35.0%
AAAATAACAGGGTATGGGTA+TGG + chr5_2:17099929-17099948 Msa0760570:intron 35.0%
! CACAAAAACAGAGTATTAGG+TGG + chr5_2:17099960-17099979 Msa0760570:intron 35.0%
! CAAAAACAGAGTATTAGGTG+GGG + chr5_2:17099962-17099981 Msa0760570:intron 35.0%
ACGTAACAAAAAAACGAGCT+GGG - chr5_2:17100221-17100240 None:intergenic 35.0%
AACGTAACAAAAAAACGAGC+TGG - chr5_2:17100222-17100241 None:intergenic 35.0%
!!! TTTTTTCCATGTTTGGAGTC+AGG - chr5_2:17100264-17100283 None:intergenic 35.0%
!!! TGGTTCGTTTTTTCCATGTT+TGG - chr5_2:17100271-17100290 None:intergenic 35.0%
GATGTATCCACAATTGCAAT+GGG + chr5_2:17100610-17100629 Msa0760570:CDS 35.0%
CATGCACAACAAGAATAATG+TGG + chr5_2:17100780-17100799 Msa0760570:CDS 35.0%
AGAATCATATCTTCCTTCAC+CGG + chr5_2:17100805-17100824 Msa0760570:CDS 35.0%
ATATCTGTCTCCAATTGAAG+CGG + chr5_2:17100870-17100889 Msa0760570:CDS 35.0%
GGAATATGGAATTATTGACG+GGG + chr5_2:17100894-17100913 Msa0760570:CDS 35.0%
ATATGTGGGGTTAGGAAATT+CGG - chr5_2:17100997-17101016 None:intergenic 35.0%
GCTAGTATATCTCATCATCT+GGG - chr5_2:17101020-17101039 None:intergenic 35.0%
TAGCCTTTAATGACAGATAG+TGG + chr5_2:17101036-17101055 Msa0760570:exon 35.0%
GTACCACTATCTGTCATTAA+AGG - chr5_2:17101042-17101061 None:intergenic 35.0%
!!! CACCTTTTTTGCCTAAAATG+TGG - chr5_2:17101116-17101135 None:intergenic 35.0%
ATTTCAGGCTTATTGTGTGT+AGG + chr5_2:17101157-17101176 Msa0760570:three_prime_UTR 35.0%
TTTCAACTGTGATCCAGTAA+CGG + chr5_2:17101203-17101222 Msa0760570:three_prime_UTR 35.0%
TCAACAAATTTCTCCGTTAC+TGG - chr5_2:17101219-17101238 None:intergenic 35.0%
AGTTGAAGGATGAGAAAGAG+AGG - chr5_2:17094644-17094663 None:intergenic 40.0%
! TTGTGGTTTAGGGTTGAAAG+AGG - chr5_2:17094722-17094741 None:intergenic 40.0%
GTTGTGCGAAATTGTGGTTT+AGG - chr5_2:17094733-17094752 None:intergenic 40.0%
ATTGGAGTTGTGCGAAATTG+TGG - chr5_2:17094739-17094758 None:intergenic 40.0%
!! GTTTTGTTGATGGAGTTGTG+AGG - chr5_2:17094771-17094790 None:intergenic 40.0%
!!! TCTTTGGAGGGTTTTGTTGA+TGG - chr5_2:17094781-17094800 None:intergenic 40.0%
!!! TAGTGGGTTTTTGAAGTTGG+GGG - chr5_2:17094816-17094835 None:intergenic 40.0%
!! AGGTGCTGAATCTGATACTA+TGG + chr5_2:17094882-17094901 Msa0760570:CDS 40.0%
! GGTGCTGAATCTGATACTAT+GGG + chr5_2:17094883-17094902 Msa0760570:CDS 40.0%
GTGCTGAATCTGATACTATG+GGG + chr5_2:17094884-17094903 Msa0760570:CDS 40.0%
! ATACTATGGGGTTGTTGTTG+AGG + chr5_2:17094896-17094915 Msa0760570:CDS 40.0%
! TACTATGGGGTTGTTGTTGA+GGG + chr5_2:17094897-17094916 Msa0760570:CDS 40.0%
! CTTTTTATCAATTCTCCCGG+TGG + chr5_2:17095024-17095043 Msa0760570:CDS 40.0%
TGGTTCTCTCAGGTTAGATA+AGG + chr5_2:17095044-17095063 Msa0760570:intron 40.0%
TGTGCCTTGGAATTGGATAA+AGG + chr5_2:17095114-17095133 Msa0760570:intron 40.0%
AGATTGGGAAGATAAGACTC+AGG + chr5_2:17095172-17095191 Msa0760570:intron 40.0%
GATTGGGAAGATAAGACTCA+GGG + chr5_2:17095173-17095192 Msa0760570:intron 40.0%
ATTGGGAAGATAAGACTCAG+GGG + chr5_2:17095174-17095193 Msa0760570:intron 40.0%
! TCCTGCCTGCACAAAATTTT+TGG + chr5_2:17095224-17095243 Msa0760570:intron 40.0%
! CCTGCCTGCACAAAATTTTT+GGG + chr5_2:17095225-17095244 Msa0760570:intron 40.0%
GTTTGATGAAACAAGGAGGA+AGG - chr5_2:17095307-17095326 None:intergenic 40.0%
ACCAACAGAGTCTACTTTCA+GGG - chr5_2:17096099-17096118 None:intergenic 40.0%
TACCAACAGAGTCTACTTTC+AGG - chr5_2:17096100-17096119 None:intergenic 40.0%
TCAGGGACTAAAGTGACTAA+CGG + chr5_2:17096124-17096143 Msa0760570:intron 40.0%
ACTAACGGGGTCTATATTCA+GGG + chr5_2:17096139-17096158 Msa0760570:intron 40.0%
TTCAGGGACTAAATTGACCA+AGG + chr5_2:17096155-17096174 Msa0760570:intron 40.0%
GACTAACAGAGTCTACATTC+AGG + chr5_2:17096201-17096220 Msa0760570:intron 40.0%
! CCAGAAAAATTGGATAGTGG+GGG - chr5_2:17096409-17096428 None:intergenic 40.0%
GCCAGAAAAATTGGATAGTG+GGG - chr5_2:17096410-17096429 None:intergenic 40.0%
GAGCCAGAAAAATTGGATAG+TGG - chr5_2:17096412-17096431 None:intergenic 40.0%
TCCGCTACTGATAAGACTAA+AGG + chr5_2:17096430-17096449 Msa0760570:intron 40.0%
!! CCCTTTAGTCTTATCAGTAG+CGG - chr5_2:17096434-17096453 None:intergenic 40.0%
CCGCTACTGATAAGACTAAA+GGG + chr5_2:17096431-17096450 Msa0760570:intron 40.0%
! GGATAACTGACCAATTTTGG+GGG + chr5_2:17096691-17096710 Msa0760570:intron 40.0%
TACCTGAAACTCTGAGTGAA+CGG + chr5_2:17096809-17096828 Msa0760570:intron 40.0%
CATGCACTGTCAATGTAAAC+TGG - chr5_2:17097066-17097085 None:intergenic 40.0%
AGTTACGTAACCACTAGTGT+CGG + chr5_2:17097220-17097239 Msa0760570:intron 40.0%
AAAGACACACACAGCATGAA+TGG + chr5_2:17097585-17097604 Msa0760570:intron 40.0%
TGACTAAGTTACTTGAGAGC+GGG + chr5_2:17097656-17097675 Msa0760570:intron 40.0%
AAATCATTAGTGCAGAGAGC+AGG - chr5_2:17097706-17097725 None:intergenic 40.0%
ATGAATGGCTACCTAAGGTT+TGG - chr5_2:17097964-17097983 None:intergenic 40.0%
TGCAAATGAATGGCTACCTA+AGG - chr5_2:17097969-17097988 None:intergenic 40.0%
! GCTTCAAAGGTGCAAATGAA+TGG - chr5_2:17097979-17097998 None:intergenic 40.0%
! GTGTTATGGAAAGAGTGTGT+TGG - chr5_2:17098084-17098103 None:intergenic 40.0%
CCCAACAGTAGATTGTGTTA+TGG - chr5_2:17098098-17098117 None:intergenic 40.0%
TACTGCGCTTGATTAAAGAG+AGG + chr5_2:17098219-17098238 Msa0760570:intron 40.0%
GGTAGCTTCCATTATAGAGA+TGG + chr5_2:17098274-17098293 Msa0760570:intron 40.0%
! GGGCATGCTGTTTACTAATT+GGG - chr5_2:17098778-17098797 None:intergenic 40.0%
AATCATTTGGGAAACTCTGG+GGG - chr5_2:17098798-17098817 None:intergenic 40.0%
ACCGCTTTCATAAGATTTCG+TGG - chr5_2:17098841-17098860 None:intergenic 40.0%
!!! GATTTTAGGACGTTGGAACA+TGG + chr5_2:17099213-17099232 Msa0760570:intron 40.0%
TAGCATTCCTCTCCAACTAT+GGG - chr5_2:17099310-17099329 None:intergenic 40.0%
GAGGAATGCTAGAACTTTCA+AGG + chr5_2:17099319-17099338 Msa0760570:intron 40.0%
AGAACTTTCAAGGACAGCTA+TGG + chr5_2:17099329-17099348 Msa0760570:intron 40.0%
GAACTTTCAAGGACAGCTAT+GGG + chr5_2:17099330-17099349 Msa0760570:intron 40.0%
CATCTAGGAACAATGTAGTC+AGG + chr5_2:17099683-17099702 Msa0760570:intron 40.0%
AGTTTCTACGTAGGTTCGAT+TGG + chr5_2:17099710-17099729 Msa0760570:intron 40.0%
ACGGAAAACACGTTTAGATG+AGG + chr5_2:17100002-17100021 Msa0760570:intron 40.0%
CGGAAAACACGTTTAGATGA+GGG + chr5_2:17100003-17100022 Msa0760570:intron 40.0%
GTCGGGTCAAAAGAAAATTC+CGG - chr5_2:17100164-17100183 None:intergenic 40.0%
! AATTTTCTTTTGACCCGACC+CGG + chr5_2:17100165-17100184 Msa0760570:intron 40.0%
! GGCTTTGGCTTAATTGGTTT+GGG - chr5_2:17100200-17100219 None:intergenic 40.0%
! TTTTGTTACGTTCCTGCATC+AGG + chr5_2:17100230-17100249 Msa0760570:intron 40.0%
GGAAAAAACGAACCAAAGCA+AGG + chr5_2:17100276-17100295 Msa0760570:intron 40.0%
!!! CTGTTTAGTTTTCCTAGCCA+AGG - chr5_2:17100373-17100392 None:intergenic 40.0%
! GATGACTGTTTAGGTTTGCT+TGG + chr5_2:17100392-17100411 Msa0760570:intron 40.0%
GGATGTATCCACAATTGCAA+TGG + chr5_2:17100609-17100628 Msa0760570:CDS 40.0%
TCAACAGCCTCAATTATCCT+AGG + chr5_2:17100643-17100662 Msa0760570:CDS 40.0%
GCAATCATGATTCGCGTATT+AGG - chr5_2:17100700-17100719 None:intergenic 40.0%
! TCAGAACTTGTTCAAGTGAG+CGG - chr5_2:17100831-17100850 None:intergenic 40.0%
GGTTAGGAAATTCGGATCAT+CGG - chr5_2:17100989-17101008 None:intergenic 40.0%
! TCTCATCATCTGGGATATGT+GGG - chr5_2:17101011-17101030 None:intergenic 40.0%
! ATCTCATCATCTGGGATATG+TGG - chr5_2:17101012-17101031 None:intergenic 40.0%
GGCTAGTATATCTCATCATC+TGG - chr5_2:17101021-17101040 None:intergenic 40.0%
ACTTAAGATTCATCCCCTTG+CGG + chr5_2:17101077-17101096 Msa0760570:three_prime_UTR 40.0%
! CTTGCGGTATACCACATTTT+AGG + chr5_2:17101102-17101121 Msa0760570:three_prime_UTR 40.0%
AAGCACCACAACTCTCACAA+TGG + chr5_2:17094606-17094625 Msa0760570:exon 45.0%
AGAGATGGAAGGGAAGTTGA+AGG - chr5_2:17094658-17094677 None:intergenic 45.0%
!!! GGTGGTTTTGAAAAGAGGGT+GGG - chr5_2:17094694-17094713 None:intergenic 45.0%
CTGTGGCGAAGACATTTGAA+AGG - chr5_2:17094842-17094861 None:intergenic 45.0%
AGGGAGAGGATTGTGTTCTT+GGG + chr5_2:17094916-17094935 Msa0760570:CDS 45.0%
ATCTAACCTGAGAGAACCAC+CGG - chr5_2:17095043-17095062 None:intergenic 45.0%
! CCCAAAAATTTTGTGCAGGC+AGG - chr5_2:17095228-17095247 None:intergenic 45.0%
!! GGAGGAAGGGTATTTCAGTA+GGG - chr5_2:17095293-17095312 None:intergenic 45.0%
!! AGGAGGAAGGGTATTTCAGT+AGG - chr5_2:17095294-17095313 None:intergenic 45.0%
TCCCTGAAAGTAGACTCTGT+TGG + chr5_2:17096095-17096114 Msa0760570:intron 45.0%
CAGGGACTAAAGTGACTAAC+GGG + chr5_2:17096125-17096144 Msa0760570:intron 45.0%
AGGGACTAAAGTGACTAACG+GGG + chr5_2:17096126-17096145 Msa0760570:intron 45.0%
GACTAACGGGGTCTATATTC+AGG + chr5_2:17096138-17096157 Msa0760570:intron 45.0%
GACGACCCATTTCCTATTCA+GGG + chr5_2:17096261-17096280 Msa0760570:intron 45.0%
! CCCCCACTATCCAATTTTTC+TGG + chr5_2:17096406-17096425 Msa0760570:intron 45.0%
! AGTAGCGGAGCCAGAAAAAT+TGG - chr5_2:17096419-17096438 None:intergenic 45.0%
AATAGAGAAGAGGGGCTTTG+TGG + chr5_2:17096613-17096632 Msa0760570:intron 45.0%
!! TAACTGACCAATTTTGGGGG+TGG + chr5_2:17096694-17096713 Msa0760570:intron 45.0%
GATCTATGATGCACAGACAC+CGG + chr5_2:17097141-17097160 Msa0760570:intron 45.0%
! TGGATCACGTGACAAGCTTT+TGG - chr5_2:17097616-17097635 None:intergenic 45.0%
AATCAAGCGCAGTATTGCGT+AGG - chr5_2:17098213-17098232 None:intergenic 45.0%
! TGTGCAAAAAGCACACACGT+GGG - chr5_2:17098466-17098485 None:intergenic 45.0%
! GGGGCATGCTGTTTACTAAT+TGG - chr5_2:17098779-17098798 None:intergenic 45.0%
ATAACCCTGGTTCCAATCGT+GGG - chr5_2:17099011-17099030 None:intergenic 45.0%
CTAGCATTCCTCTCCAACTA+TGG - chr5_2:17099311-17099330 None:intergenic 45.0%
! ATGATTACTCGGAGTGCCTT+TGG + chr5_2:17099383-17099402 Msa0760570:intron 45.0%
TGGCCCTTTCAATATGACCT+TGG - chr5_2:17099516-17099535 None:intergenic 45.0%
CTAGATGCCTAACAGCATAG+AGG - chr5_2:17099670-17099689 None:intergenic 45.0%
CTCTATGCTGTTAGGCATCT+AGG + chr5_2:17099668-17099687 Msa0760570:intron 45.0%
TCAGGAACGAGTTTCTACGT+AGG + chr5_2:17099701-17099720 Msa0760570:intron 45.0%
! CCTACAGCTAGCACAGTTTT+TGG - chr5_2:17100057-17100076 None:intergenic 45.0%
CCAAAAACTGTGCTAGCTGT+AGG + chr5_2:17100054-17100073 Msa0760570:intron 45.0%
!! TTGGTTTGGGCTAAACGAAC+CGG - chr5_2:17100187-17100206 None:intergenic 45.0%
! GGGCTTTGGCTTAATTGGTT+TGG - chr5_2:17100201-17100220 None:intergenic 45.0%
CAAAAAAACGAGCTGGGCTT+TGG - chr5_2:17100215-17100234 None:intergenic 45.0%
CTTGTTCCTGACTCCAAACA+TGG + chr5_2:17100255-17100274 Msa0760570:intron 45.0%
! TTTTCCTAGCCAAGGTAGAC+AGG - chr5_2:17100365-17100384 None:intergenic 45.0%
TACCATGGCTATCTACGATG+CGG + chr5_2:17100570-17100589 Msa0760570:CDS 45.0%
TGCAATGCCCATTGCAATTG+TGG - chr5_2:17100620-17100639 None:intergenic 45.0%
ACAGCCTCAATTATCCTAGG+TGG + chr5_2:17100646-17100665 Msa0760570:CDS 45.0%
ATCATGATTGCTCAACCACC+TGG + chr5_2:17100709-17100728 Msa0760570:CDS 45.0%
CCATATTCCACCGCTTCAAT+TGG - chr5_2:17100883-17100902 None:intergenic 45.0%
CCAATTGAAGCGGTGGAATA+TGG + chr5_2:17100880-17100899 Msa0760570:CDS 45.0%
! GTTGCTTCTTCCACCTTTTC+TGG - chr5_2:17100958-17100977 None:intergenic 45.0%
! CTCATCATCTGGGATATGTG+GGG - chr5_2:17101010-17101029 None:intergenic 45.0%
CTTAAGATTCATCCCCTTGC+GGG + chr5_2:17101078-17101097 Msa0760570:three_prime_UTR 45.0%
TTAAGATTCATCCCCTTGCG+GGG + chr5_2:17101079-17101098 Msa0760570:three_prime_UTR 45.0%
TTATTGTGTGTAGGATGCCG+TGG + chr5_2:17101166-17101185 Msa0760570:three_prime_UTR 45.0%
!! AAATTATAATTATAAGAAAA+GGG - chr5_2:17095444-17095463 None:intergenic 5.0%
!! TGTAAAAAAAAAAAAAAAAA+AGG + chr5_2:17096467-17096486 Msa0760570:intron 5.0%
GCGTTGTGAGAGAGATGGAA+GGG - chr5_2:17094668-17094687 None:intergenic 50.0%
TGCGTTGTGAGAGAGATGGA+AGG - chr5_2:17094669-17094688 None:intergenic 50.0%
GGAATGCGTTGTGAGAGAGA+TGG - chr5_2:17094673-17094692 None:intergenic 50.0%
!!! GGGTGGTTTTGAAAAGAGGG+TGG - chr5_2:17094695-17094714 None:intergenic 50.0%
GGGTTGAAAGAGGAAATGGG+TGG - chr5_2:17094712-17094731 None:intergenic 50.0%
GTTGTGAGGACGCAGTTGAT+TGG - chr5_2:17094757-17094776 None:intergenic 50.0%
AATGTCTTCGCCACAGACTC+CGG + chr5_2:17094846-17094865 Msa0760570:CDS 50.0%
GAGGGAGAGGATTGTGTTCT+TGG + chr5_2:17094915-17094934 Msa0760570:CDS 50.0%
TCTAACCTGAGAGAACCACC+GGG - chr5_2:17095042-17095061 None:intergenic 50.0%
AGCCACACACAAGGTTGTGT+GGG + chr5_2:17095200-17095219 Msa0760570:intron 50.0%
GACCAAGGAGTCTGCATTCA+AGG + chr5_2:17096170-17096189 Msa0760570:intron 50.0%
CTCCTTGAATGCAGACTCCT+TGG - chr5_2:17096175-17096194 None:intergenic 50.0%
CGACGACCCATTTCCTATTC+AGG + chr5_2:17096260-17096279 Msa0760570:intron 50.0%
AACCAAGCCACCCCCAAAAT+TGG - chr5_2:17096704-17096723 None:intergenic 50.0%
GTCCGTTCACTCAGAGTTTC+AGG - chr5_2:17096814-17096833 None:intergenic 50.0%
AACGTTGACGTGTTCGTGTC+CGG - chr5_2:17097163-17097182 None:intergenic 50.0%
!! GTAACCACTAGTGTCGGTGT+TGG + chr5_2:17097226-17097245 Msa0760570:intron 50.0%
ACACGACACATGTCGAACAC+CGG + chr5_2:17097249-17097268 Msa0760570:intron 50.0%
! AACACTTTGAAGGCGTGTCC+CGG - chr5_2:17097271-17097290 None:intergenic 50.0%
ACGTCGCACCAACACTTTGA+AGG - chr5_2:17097281-17097300 None:intergenic 50.0%
! GTGTGCAAAAAGCACACACG+TGG - chr5_2:17098467-17098486 None:intergenic 50.0%
GCAGTAGCATGGTGACTAGA+TGG - chr5_2:17098648-17098667 None:intergenic 50.0%
GGTGGTTTGAATGAAAGCGG+TGG + chr5_2:17098684-17098703 Msa0760570:intron 50.0%
CATAACCCTGGTTCCAATCG+TGG - chr5_2:17099012-17099031 None:intergenic 50.0%
!! TTTGGTGCCCATAGTTGGAG+AGG + chr5_2:17099300-17099319 Msa0760570:intron 50.0%
! TAGGTTCGATTGGCCAGTGA+AGG + chr5_2:17099720-17099739 Msa0760570:intron 50.0%
! AGGTTCGATTGGCCAGTGAA+GGG + chr5_2:17099721-17099740 Msa0760570:intron 50.0%
CCAGTGAAGGGACGTAAAGT+CGG + chr5_2:17099733-17099752 Msa0760570:intron 50.0%
CAGTGAAGGGACGTAAAGTC+GGG + chr5_2:17099734-17099753 Msa0760570:intron 50.0%
AGTGAAGGGACGTAAAGTCG+GGG + chr5_2:17099735-17099754 Msa0760570:intron 50.0%
GGTAGAGAGAGAGAGAACGA+CGG + chr5_2:17099983-17100002 Msa0760570:intron 50.0%
TGAGGGTAGAGAGAGAACGA+CGG + chr5_2:17100020-17100039 Msa0760570:intron 50.0%
AACTGTGCTAGCTGTAGGTG+AGG + chr5_2:17100059-17100078 Msa0760570:intron 50.0%
!! AGGAAGTACCGTTCGCGTTT+AGG + chr5_2:17100079-17100098 Msa0760570:intron 50.0%
!! GGAAGTACCGTTCGCGTTTA+GGG + chr5_2:17100080-17100099 Msa0760570:intron 50.0%
! TACCGTTCGCGTTTAGGGTT+TGG + chr5_2:17100085-17100104 Msa0760570:intron 50.0%
! ACCGTTCGCGTTTAGGGTTT+GGG + chr5_2:17100086-17100105 Msa0760570:intron 50.0%
ACCCAAACCCTAAACGCGAA+CGG - chr5_2:17100090-17100109 None:intergenic 50.0%
! TGGTTTGGGCTAAACGAACC+GGG - chr5_2:17100186-17100205 None:intergenic 50.0%
! GAGCTGGGCTTTGGCTTAAT+TGG - chr5_2:17100206-17100225 None:intergenic 50.0%
CAGGAACAAGTTCCTGATGC+AGG - chr5_2:17100245-17100264 None:intergenic 50.0%
AACGAACCAAAGCAAGGACG+AGG + chr5_2:17100282-17100301 Msa0760570:intron 50.0%
GCTTGGAGTCATGTGTCTGA+TGG + chr5_2:17100409-17100428 Msa0760570:intron 50.0%
GCCTCAATTATCCTAGGTGG+TGG + chr5_2:17100649-17100668 Msa0760570:CDS 50.0%
GCCACCACCTAGGATAATTG+AGG - chr5_2:17100653-17100672 None:intergenic 50.0%
CATAGCTAGCCGCTTACCTT+TGG - chr5_2:17100677-17100696 None:intergenic 50.0%
ATGATTGCTCAACCACCTGG+AGG + chr5_2:17100712-17100731 Msa0760570:CDS 50.0%
! AACTTGTTCAAGTGAGCGGC+CGG - chr5_2:17100827-17100846 None:intergenic 50.0%
TCTGTCTCCAATTGAAGCGG+TGG + chr5_2:17100873-17100892 Msa0760570:CDS 50.0%
!! TCTTCCACCTTTTCTGGCAC+TGG - chr5_2:17100952-17100971 None:intergenic 50.0%
! CATCTGGGATATGTGGGGTT+AGG - chr5_2:17101005-17101024 None:intergenic 50.0%
! TGGGGTTGTTGTTGAGGGAG+AGG + chr5_2:17094902-17094921 Msa0760570:CDS 55.0%
ATTCTCCCGGTGGTTCTCTC+AGG + chr5_2:17095034-17095053 Msa0760570:CDS 55.0%
GGGAAGATAAGACTCAGGGG+CGG + chr5_2:17095177-17095196 Msa0760570:intron 55.0%
GAGCCACACACAAGGTTGTG+TGG + chr5_2:17095199-17095218 Msa0760570:intron 55.0%
AGCCCACACAACCTTGTGTG+TGG - chr5_2:17095205-17095224 None:intergenic 55.0%
!! GACCAATTTTGGGGGTGGCT+TGG + chr5_2:17096699-17096718 Msa0760570:intron 55.0%
GTGTCCAACACCGACACTAG+TGG - chr5_2:17097233-17097252 None:intergenic 55.0%
CACGACACATGTCGAACACC+GGG + chr5_2:17097250-17097269 Msa0760570:intron 55.0%
GGGACACGCCTTCAAAGTGT+TGG + chr5_2:17097270-17097289 Msa0760570:intron 55.0%
!! GTTAGGGTTAGCCTTGACCG+CGG + chr5_2:17098963-17098982 Msa0760570:intron 55.0%
! CTAGTCTTTGGGTTCAGCCG+CGG - chr5_2:17098983-17099002 None:intergenic 55.0%
GCGGCTGAACCCAAAGACTA+GGG + chr5_2:17098982-17099001 Msa0760570:intron 55.0%
! CGTGGGACTCCCTAGTCTTT+GGG - chr5_2:17098994-17099013 None:intergenic 55.0%
! TCGTGGGACTCCCTAGTCTT+TGG - chr5_2:17098995-17099014 None:intergenic 55.0%
AGACTAGGGAGTCCCACGAT+TGG + chr5_2:17098996-17099015 Msa0760570:intron 55.0%
GAGTCCCACGATTGGAACCA+GGG + chr5_2:17099004-17099023 Msa0760570:intron 55.0%
CCGACTTTACGTCCCTTCAC+TGG - chr5_2:17099736-17099755 None:intergenic 55.0%
! TCGCGTTTAGGGTTTGGGTG+AGG + chr5_2:17100091-17100110 Msa0760570:intron 55.0%
TTGGGCTAAACGAACCGGGT+CGG - chr5_2:17100182-17100201 None:intergenic 55.0%
AACGTGCCTCGTCCTTGCTT+TGG - chr5_2:17100291-17100310 None:intergenic 55.0%
AAGCAAGGACGAGGCACGTT+TGG + chr5_2:17100291-17100310 Msa0760570:intron 55.0%
AGCAAGGACGAGGCACGTTT+GGG + chr5_2:17100292-17100311 Msa0760570:intron 55.0%
! TTTGGGTGTGGGAAGCACGT+AGG + chr5_2:17100309-17100328 Msa0760570:intron 55.0%
AGGTAGACAGGAACGAGTCC+CGG - chr5_2:17100353-17100372 None:intergenic 55.0%
GGACTCGTTCCTGTCTACCT+TGG + chr5_2:17100353-17100372 Msa0760570:intron 55.0%
CGTTCCTGTCTACCTTGGCT+AGG + chr5_2:17100358-17100377 Msa0760570:intron 55.0%
CACCGCATCGTAGATAGCCA+TGG - chr5_2:17100575-17100594 None:intergenic 55.0%
! ACGATGCGGTGCAGCTTGTT+AGG + chr5_2:17100584-17100603 Msa0760570:CDS 55.0%
!! CGATGCGGTGCAGCTTGTTA+GGG + chr5_2:17100585-17100604 Msa0760570:CDS 55.0%
! ATCCTAGGTGGTGGCACCAA+AGG + chr5_2:17100658-17100677 Msa0760570:CDS 55.0%
!! TACCTTTGGTGCCACCACCT+AGG - chr5_2:17100663-17100682 None:intergenic 55.0%
GTGGTGGCACCAAAGGTAAG+CGG + chr5_2:17100665-17100684 Msa0760570:CDS 55.0%
!!! TTTTCTGGCACTGGCAGGAG+AGG - chr5_2:17100943-17100962 None:intergenic 55.0%
TCTCCTGCCAGTGCCAGAAA+AGG + chr5_2:17100942-17100961 Msa0760570:CDS 55.0%
CTTCGCCACAGACTCCGGAA+CGG + chr5_2:17094851-17094870 Msa0760570:CDS 60.0%
TTCGCCACAGACTCCGGAAC+GGG + chr5_2:17094852-17094871 Msa0760570:CDS 60.0%
ATAGCCCGTTCCGGAGTCTG+TGG - chr5_2:17094859-17094878 None:intergenic 60.0%
!! ACTCCGGAACGGGCTATGAG+AGG + chr5_2:17094862-17094881 Msa0760570:CDS 60.0%
GCACCTCTCATAGCCCGTTC+CGG - chr5_2:17094868-17094887 None:intergenic 60.0%
! TTTGGGTTCAGCCGCGGTCA+AGG - chr5_2:17098977-17098996 None:intergenic 60.0%
CGCGGCTGAACCCAAAGACT+AGG + chr5_2:17098981-17099000 Msa0760570:intron 60.0%
GGAGTCCCACGATTGGAACC+AGG + chr5_2:17099003-17099022 Msa0760570:intron 60.0%
TGGGCTAAACGAACCGGGTC+GGG - chr5_2:17100181-17100200 None:intergenic 60.0%
GACGAGGCACGTTTGGGTGT+GGG + chr5_2:17100298-17100317 Msa0760570:intron 60.0%
! GTGTGGGAAGCACGTAGGAG+CGG + chr5_2:17100314-17100333 Msa0760570:intron 60.0%
!! TGCGGTGCAGCTTGTTAGGG+CGG + chr5_2:17100588-17100607 Msa0760570:CDS 60.0%
!! CAACCACCTGGAGGTGCTAG+TGG + chr5_2:17100721-17100740 Msa0760570:CDS 60.0%
TGTCCACTAGCACCTCCAGG+TGG - chr5_2:17100727-17100746 None:intergenic 60.0%
GCTTGTCCACTAGCACCTCC+AGG - chr5_2:17100730-17100749 None:intergenic 60.0%
TTCAAGTGAGCGGCCGGTGA+AGG - chr5_2:17100821-17100840 None:intergenic 60.0%
!!! CCACCTTTTCTGGCACTGGC+AGG - chr5_2:17100948-17100967 None:intergenic 60.0%
CCTGCCAGTGCCAGAAAAGG+TGG + chr5_2:17100945-17100964 Msa0760570:CDS 60.0%
TATACCGCAAGCCCCGCAAG+GGG - chr5_2:17101093-17101112 None:intergenic 60.0%
GTATACCGCAAGCCCCGCAA+GGG - chr5_2:17101094-17101113 None:intergenic 60.0%
GGACGAGGCACGTTTGGGTG+TGG + chr5_2:17100297-17100316 Msa0760570:intron 65.0%
GAGCGGACGATCCTTCGTGC+CGG + chr5_2:17100331-17100350 Msa0760570:intron 65.0%
AGCGGACGATCCTTCGTGCC+GGG + chr5_2:17100332-17100351 Msa0760570:intron 65.0%
AGGAACGAGTCCCGGCACGA+AGG - chr5_2:17100345-17100364 None:intergenic 65.0%
TCATCCCCTTGCGGGGCTTG+CGG + chr5_2:17101086-17101105 Msa0760570:three_prime_UTR 65.0%
GGTATACCGCAAGCCCCGCA+AGG - chr5_2:17101095-17101114 None:intergenic 65.0%
CAGGGGCGGAGCCACACACA+AGG + chr5_2:17095191-17095210 Msa0760570:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 17094559 17101282 17094559 ID=Msa0760570;Name=Msa0760570
chr5_2 mRNA 17094559 17101282 17094559 ID=Msa0760570-mRNA-1;Parent=Msa0760570;Name=Msa0760570-mRNA-1;_AED=0.03;_eAED=0.03;_QI=66|1|1|1|1|1|2|244|300
chr5_2 exon 17094559 17095055 17094559 ID=Msa0760570-mRNA-1:exon:7609;Parent=Msa0760570-mRNA-1
chr5_2 exon 17100567 17101282 17100567 ID=Msa0760570-mRNA-1:exon:7610;Parent=Msa0760570-mRNA-1
chr5_2 five_prime_UTR 17094559 17094624 17094559 ID=Msa0760570-mRNA-1:five_prime_utr;Parent=Msa0760570-mRNA-1
chr5_2 CDS 17094625 17095055 17094625 ID=Msa0760570-mRNA-1:cds;Parent=Msa0760570-mRNA-1
chr5_2 CDS 17100567 17101038 17100567 ID=Msa0760570-mRNA-1:cds;Parent=Msa0760570-mRNA-1
chr5_2 three_prime_UTR 17101039 17101282 17101039 ID=Msa0760570-mRNA-1:three_prime_utr;Parent=Msa0760570-mRNA-1
Gene Sequence

>Msa0760570

ATGGATTTACTCACAACCTCTCTTTCTCATCCTTCAACTTCCCTTCCATCTCTCTCACAACGCATTCCCACCCTCTTTTCAAAACCACCCATTTCCTCTTTCAACCCTAAACCACAATTTCGCACAACTCCAATCAACTGCGTCCTCACAACTCCATCAACAAAACCCTCCAAAGATTCAAACTTTAACCCCCAACTTCAAAAACCCACTATCACCTTTCAAATGTCTTCGCCACAGACTCCGGAACGGGCTATGAGAGGTGCTGAATCTGATACTATGGGGTTGTTGTTGAGGGAGAGGATTGTGTTCTTGGGTAGTGAAATTGATGATTTTGTTGCTGATGCTATTATGAGTCAGTTGTTGCTTTTGGATGCTCAAGATCCTACTAAAGATATCAAGCTTTTTATCAATTCTCCCGGTGGTTCTCTCAGTGCTACCATGGCTATCTACGATGCGGTGCAGCTTGTTAGGGCGGATGTATCCACAATTGCAATGGGCATTGCAGCATCAACAGCCTCAATTATCCTAGGTGGTGGCACCAAAGGTAAGCGGCTAGCTATGCCTAATACGCGAATCATGATTGCTCAACCACCTGGAGGTGCTAGTGGACAAGCTATAGATGTAGAAATTCAAGCTAAAGAACTCATGCACAACAAGAATAATGTGGTCAGAATCATATCTTCCTTCACCGGCCGCTCACTTGAACAAGTTCTGAAAGATATCGATAGGGATAGATATCTGTCTCCAATTGAAGCGGTGGAATATGGAATTATTGACGGGGTAATCGATAGAGAAATGATTATTCCTCTCCTGCCAGTGCCAGAAAAGGTGGAAGAAGCAACACTAAACACCGATGATCCGAATTTCCTAACCCCACATATCCCAGATGATGAGATATACTAG
Protein sequence

>Msa0760570

MDLLTTSLSHPSTSLPSLSQRIPTLFSKPPISSFNPKPQFRTTPINCVLTTPSTKPSKDSNFNPQLQKPTITFQMSSPQTPERAMRGAESDTMGLLLRERIVFLGSEIDDFVADAIMSQLLLLDAQDPTKDIKLFINSPGGSLSATMAIYDAVQLVRADVSTIAMGIAASTASIILGGGTKGKRLAMPNTRIMIAQPPGGASGQAIDVEIQAKELMHNKNNVVRIISSFTGRSLEQVLKDIDRDRYLSPIEAVEYGIIDGVIDREMIIPLLPVPEKVEEATLNTDDPNFLTPHIPDDEIY*