AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0802610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0802610 MtrunA17_Chr5g0410401 71.867 814 197 7 131 916 2 811 0.0 1124
Msa0802610 MtrunA17_Chr5g0410481 45.985 1096 522 26 1 1052 1 1070 0.0 786
Msa0802610 MtrunA17_Chr5g0410351 45.946 1110 515 32 9 1058 5 1089 0.0 770
Msa0802610 MtrunA17_Chr5g0410161 47.363 948 440 29 153 1058 308 1238 0.0 728
Msa0802610 MtrunA17_Chr5g0410161 36.232 276 139 15 29 278 28 292 9.12e-21 99.0
Msa0802610 MtrunA17_Chr5g0410261 41.978 1072 514 30 1 991 10 1054 0.0 670
Msa0802610 MtrunA17_Chr5g0410301 42.388 1005 473 30 5 944 1 964 0.0 636
Msa0802610 MtrunA17_Chr2g0316291 30.762 1115 625 42 25 1050 26 1082 1.54e-108 364
Msa0802610 MtrunA17_Chr6g0456131 31.483 991 513 36 147 1059 145 1047 1.38e-86 302
Msa0802610 MtrunA17_Chr7g0244231 27.768 1084 609 34 31 1050 28 1001 1.45e-86 301
Msa0802610 MtrunA17_Chr4g0009781 30.335 956 538 33 111 998 115 1010 2.71e-85 298
Msa0802610 MtrunA17_Chr5g0414311 27.586 1102 634 37 60 1056 64 1106 3.12e-85 299
Msa0802610 MtrunA17_Chr5g0430291 27.869 1037 633 32 6 984 13 992 5.71e-83 291
Msa0802610 MtrunA17_Chr6g0468021 29.859 1065 616 39 61 1050 61 1069 1.39e-82 291
Msa0802610 MtrunA17_Chr5g0415471 27.039 1091 650 34 61 1059 65 1101 5.63e-82 290
Msa0802610 MtrunA17_Chr6g0468151 28.174 1079 634 36 60 1050 60 1085 2.69e-81 288
Msa0802610 MtrunA17_Chr4g0010261 29.861 1008 583 33 60 998 61 1013 4.58e-81 286
Msa0802610 MtrunA17_Chr5g0431051 28.169 1065 603 34 20 1015 17 988 8.52e-81 284
Msa0802610 MtrunA17_Chr5g0431051 32.447 188 108 6 882 1050 797 984 4.09e-12 70.9
Msa0802610 MtrunA17_Chr6g0470011 27.451 1071 594 38 96 1061 105 1097 1.12e-80 286
Msa0802610 MtrunA17_Chr4g0010221 29.866 971 540 35 111 1008 115 1017 1.80e-80 284
Msa0802610 MtrunA17_Chr4g0010201 30.466 965 547 35 111 1010 115 1020 6.76e-80 284
Msa0802610 MtrunA17_Chr5g0430721 28.684 1011 597 38 60 1003 101 1054 1.16e-78 279
Msa0802610 MtrunA17_Chr6g0470081 27.923 992 590 32 147 1061 154 1097 1.76e-78 280
Msa0802610 MtrunA17_Chr4g0027251 27.341 1068 617 34 61 1055 61 1042 2.86e-78 278
Msa0802610 MtrunA17_Chr5g0430511 27.387 1110 615 38 20 1055 17 1009 9.90e-78 276
Msa0802610 MtrunA17_Chr6g0468451 27.087 1126 645 40 37 1050 34 1095 1.20e-77 277
Msa0802610 MtrunA17_Chr3g0082811 31.876 709 407 24 100 760 115 795 7.58e-77 270
Msa0802610 MtrunA17_Chr1g0155321 27.362 1016 600 35 60 1003 60 1009 4.34e-76 271
Msa0802610 MtrunA17_Chr6g0468271 27.802 1133 651 44 21 1050 19 1087 8.28e-76 272
Msa0802610 MtrunA17_Chr5g0430441 27.462 1056 576 35 60 1054 60 986 1.13e-75 270
Msa0802610 MtrunA17_Chr3g0087301 26.684 1158 655 38 9 1055 5 1079 2.88e-75 270
Msa0802610 MtrunA17_Chr6g0468121 27.924 1103 643 41 37 1050 34 1073 3.66e-75 270
Msa0802610 MtrunA17_Chr5g0429961 27.421 1105 586 40 20 1050 17 979 1.21e-74 266
Msa0802610 MtrunA17_Chr5g0430641 27.298 1099 630 35 20 1054 17 1010 1.95e-74 266
Msa0802610 MtrunA17_Chr8g0352861 27.003 1148 637 44 26 1033 33 1119 1.22e-73 266
Msa0802610 MtrunA17_Chr5g0430581 27.548 991 598 30 17 934 14 957 2.32e-73 263
Msa0802610 MtrunA17_Chr5g0430581 31.731 208 114 6 871 1050 768 975 1.12e-12 72.4
Msa0802610 MtrunA17_Chr5g0430621 27.345 1013 613 33 60 1013 60 1008 4.45e-73 262
Msa0802610 MtrunA17_Chr3g0085651 29.158 998 565 38 94 1032 107 1021 6.09e-73 265
Msa0802610 MtrunA17_Chr3g0085521 28.314 1109 636 46 61 1050 65 1133 2.08e-72 262
Msa0802610 MtrunA17_Chr3g0082881 32.794 680 366 26 149 762 161 815 3.42e-72 257
Msa0802610 MtrunA17_Chr3g0086221 27.739 1013 585 34 151 1052 159 1135 9.12e-72 260
Msa0802610 MtrunA17_Chr6g0456121 27.900 957 506 27 149 1052 154 979 9.45e-72 258
Msa0802610 MtrunA17_Chr3g0123111 27.875 1087 625 41 61 1050 61 1085 1.09e-71 259
Msa0802610 MtrunA17_Chr3g0089211 27.713 1115 636 44 4 1029 56 1089 2.99e-71 259
Msa0802610 MtrunA17_Chr3g0089471 26.263 1188 682 45 6 1045 11 1152 3.99e-71 259
Msa0802610 MtrunA17_Chr3g0082891 31.587 668 356 22 149 746 161 797 4.48e-71 254
Msa0802610 MtrunA17_Chr3g0113791 28.767 1022 567 39 124 1042 132 1095 7.24e-71 257
Msa0802610 MtrunA17_Chr3g0089591 26.156 1189 685 46 6 1045 11 1155 8.65e-71 258
Msa0802610 MtrunA17_Chr1g0155991 28.218 1010 599 34 44 989 45 992 8.95e-71 256
Msa0802610 MtrunA17_Chr3g0087541 27.965 1037 587 37 131 1050 158 1151 9.66e-71 257
Msa0802610 MtrunA17_Chr3g0089781 27.666 1041 605 43 6 955 11 994 1.23e-70 255
Msa0802610 MtrunA17_Chr5g0430141 27.149 1105 629 35 20 1054 17 1015 3.34e-70 254
Msa0802610 MtrunA17_Chr3g0090691 27.890 986 555 39 112 1029 145 1042 4.39e-70 256
Msa0802610 MtrunA17_Chr6g0470001 28.965 763 429 22 350 1061 4 704 6.44e-70 248
Msa0802610 MtrunA17_Chr3g0085501 29.064 1015 535 43 131 1008 158 1124 7.77e-70 254
Msa0802610 MtrunA17_Chr3g0086621 27.108 1103 655 41 61 1050 65 1131 9.01e-70 254
Msa0802610 MtrunA17_Chr3g0089811 27.867 1116 635 49 4 1029 9 1044 1.02e-69 254
Msa0802610 MtrunA17_Chr2g0282991 29.698 926 542 36 171 1018 192 1086 1.30e-69 254
Msa0802610 MtrunA17_Chr3g0091061 28.473 1015 581 42 112 1037 145 1103 1.47e-69 254
Msa0802610 MtrunA17_Chr3g0085931 27.480 1099 622 42 61 1050 61 1093 1.65e-69 253
Msa0802610 MtrunA17_Chr3g0085471 29.076 963 539 39 131 1018 158 1051 2.83e-69 253
Msa0802610 MtrunA17_Chr4g0010251 29.915 946 527 33 125 1005 137 1011 3.02e-69 251
Msa0802610 MtrunA17_Chr3g0089421 27.605 1123 644 47 4 1036 9 1052 3.48e-69 253
Msa0802610 MtrunA17_Chr6g0470021 28.901 910 522 36 134 990 34 871 4.33e-69 249
Msa0802610 MtrunA17_Chr3g0085091 27.909 1014 592 39 149 1050 158 1144 8.50e-69 251
Msa0802610 MtrunA17_Chr3g0089761 28.296 1039 596 46 61 1011 71 1048 1.18e-68 251
Msa0802610 MtrunA17_Chr3g0089251 27.428 1112 629 45 4 1004 38 1082 2.00e-68 251
Msa0802610 MtrunA17_Chr3g0091081 27.789 986 533 39 112 1028 145 1020 2.17e-68 250
Msa0802610 MtrunA17_Chr3g0083591 27.812 978 569 34 144 1045 131 1047 2.87e-68 249
Msa0802610 MtrunA17_Chr2g0309721 27.866 1073 632 42 23 1011 32 1046 3.60e-68 250
Msa0802610 MtrunA17_Chr3g0092241 26.732 1126 623 44 8 1029 16 1043 5.88e-68 248
Msa0802610 MtrunA17_Chr5g0414301 31.061 660 336 20 402 1051 15 565 6.44e-68 239
Msa0802610 MtrunA17_Chr3g0089871 27.462 1107 663 45 4 1016 9 1069 1.19e-67 248
Msa0802610 MtrunA17_Chr1g0169901 28.389 1018 616 36 61 1010 70 1042 1.60e-67 246
Msa0802610 MtrunA17_Chr5g0429951 28.300 1000 587 34 20 935 17 970 1.75e-67 246
Msa0802610 MtrunA17_Chr3g0090141 27.728 1118 633 49 61 1062 71 1129 1.80e-67 248
Msa0802610 MtrunA17_Chr3g0092261 27.126 1117 636 44 6 1029 56 1087 2.79e-67 247
Msa0802610 MtrunA17_Chr3g0087701 28.697 1021 575 44 149 1055 157 1138 9.62e-67 245
Msa0802610 MtrunA17_Chr5g0414181 30.303 858 485 38 149 954 167 963 1.06e-66 243
Msa0802610 MtrunA17_Chr3g0090371 28.543 1023 580 45 98 1026 126 1091 1.21e-66 245
Msa0802610 MtrunA17_Chr3g0089541 26.246 1124 669 45 4 1016 9 1083 2.28e-66 244
Msa0802610 MtrunA17_Chr2g0299151 28.345 1136 619 52 26 1033 32 1100 2.29e-66 244
Msa0802610 MtrunA17_Chr3g0086161 26.079 1112 656 41 61 1050 65 1132 2.46e-66 243
Msa0802610 MtrunA17_Chr3g0087581 29.325 948 528 42 151 1028 163 1038 2.71e-66 243
Msa0802610 MtrunA17_Chr3g0090651 29.172 785 444 30 112 834 145 879 3.60e-66 242
Msa0802610 MtrunA17_Chr3g0085331 28.780 959 490 41 131 1014 158 998 4.85e-66 243
Msa0802610 MtrunA17_Chr3g0090431 27.976 983 573 39 134 1026 26 963 5.69e-66 242
Msa0802610 MtrunA17_Chr7g0248531 29.314 846 478 39 61 834 69 866 6.29e-66 240
Msa0802610 MtrunA17_Chr3g0084051 27.435 1006 590 39 148 1050 172 1140 8.53e-66 242
Msa0802610 MtrunA17_Chr3g0083621 27.688 986 580 39 148 1045 159 1099 1.10e-65 242
Msa0802610 MtrunA17_Chr5g0414201 27.039 932 559 35 61 924 61 939 1.15e-65 239
Msa0802610 MtrunA17_Chr3g0085561 28.770 935 497 35 148 1013 141 975 1.88e-65 239
Msa0802610 MtrunA17_Chr3g0085131 28.051 1016 590 38 145 1052 150 1132 4.31e-65 239
Msa0802610 MtrunA17_Chr3g0086091 26.456 979 579 34 183 1052 1 947 1.09e-64 237
Msa0802610 MtrunA17_Chr3g0085171 26.608 1026 592 36 149 1050 141 1129 1.11e-64 238
Msa0802610 MtrunA17_Chr3g0085111 27.692 1040 558 39 149 1050 154 1137 3.98e-64 237
Msa0802610 MtrunA17_Chr3g0089961 27.133 914 540 35 6 834 11 883 4.17e-64 234
Msa0802610 MtrunA17_Chr4g0025391 26.493 1072 640 43 31 1029 45 1041 4.34e-64 237
Msa0802610 MtrunA17_Chr3g0089651 26.269 1123 648 43 4 1029 9 1048 5.55e-64 237
Msa0802610 MtrunA17_Chr3g0083681 27.197 1081 666 38 36 1045 34 1064 9.11e-64 236
Msa0802610 MtrunA17_Chr3g0085161 27.717 1003 600 35 145 1050 28 1002 1.82e-63 234
Msa0802610 MtrunA17_Chr3g0087841 26.684 1128 637 44 61 1050 71 1146 6.49e-63 233
Msa0802610 MtrunA17_Chr3g0083751 27.518 963 576 35 165 1045 172 1094 6.67e-63 233
Msa0802610 MtrunA17_Chr8g0348931 27.110 1114 651 47 6 1032 11 1050 6.79e-63 233
Msa0802610 MtrunA17_Chr3g0089991 26.523 1116 647 41 4 1036 9 1034 8.48e-63 233
Msa0802610 MtrunA17_Chr1g0164611 27.373 1001 571 38 81 988 115 1052 1.31e-62 232
Msa0802610 MtrunA17_Chr8g0356251 26.820 1003 554 39 148 1018 175 1129 1.47e-62 233
Msa0802610 MtrunA17_Chr3g0085451 27.934 963 553 39 110 978 109 1024 1.64e-62 231
Msa0802610 MtrunA17_Chr3g0083641 26.581 1091 659 39 37 1045 35 1065 1.94e-62 232
Msa0802610 MtrunA17_Chr8g0352831 26.944 1106 632 44 42 1018 53 1111 4.10e-62 231
Msa0802610 MtrunA17_Chr3g0086151 28.485 825 489 33 61 811 65 862 6.55e-62 228
Msa0802610 MtrunA17_Chr3g0089501 27.551 882 523 36 6 807 9 854 6.57e-62 228
Msa0802610 MtrunA17_Chr6g0468101 26.131 1083 612 35 61 1050 61 1048 9.61e-62 229
Msa0802610 MtrunA17_Chr3g0085751 26.558 1107 664 41 61 1050 62 1136 1.90e-61 229
Msa0802610 MtrunA17_Chr3g0082871 30.115 694 377 27 31 655 34 688 2.06e-61 223
Msa0802610 MtrunA17_Chr3g0082791 27.633 883 496 33 146 935 170 1002 3.86e-61 227
Msa0802610 MtrunA17_Chr3g0082131 26.043 1175 642 39 61 1050 69 1201 3.92e-61 228
Msa0802610 MtrunA17_Chr3g0089601 27.551 882 523 36 6 807 9 854 4.16e-61 226
Msa0802610 MtrunA17_Chr3g0086181 28.624 814 490 30 61 806 65 855 1.13e-60 224
Msa0802610 MtrunA17_Chr4g0008461 27.192 1129 664 45 4 1045 13 1070 5.78e-60 224
Msa0802610 MtrunA17_Chr3g0084971 26.917 1174 674 48 6 1047 11 1132 1.00e-59 224
Msa0802610 MtrunA17_Chr3g0084081 27.014 1018 583 43 148 1050 172 1144 1.05e-59 223
Msa0802610 MtrunA17_Chr3g0090401 27.073 1001 534 41 77 1012 325 1194 2.44e-59 223
Msa0802610 MtrunA17_Chr5g0446611 27.816 870 533 32 6 823 44 870 6.87e-59 218
Msa0802610 MtrunA17_Chr6g0468201 30.109 734 423 29 347 1050 1 674 8.11e-59 216
Msa0802610 MtrunA17_Chr3g0084031 26.938 1006 601 39 148 1050 174 1148 2.35e-58 219
Msa0802610 MtrunA17_Chr3g0087731 27.138 947 552 38 183 1056 1 882 3.07e-58 216
Msa0802610 MtrunA17_Chr3g0080871 27.244 936 580 33 171 1045 179 1074 4.71e-58 218
Msa0802610 MtrunA17_Chr3g0084061 27.044 1113 652 44 61 1050 70 1145 5.62e-58 218
Msa0802610 MtrunA17_Chr2g0299101 29.403 704 397 26 171 807 188 858 6.86e-58 215
Msa0802610 MtrunA17_Chr7g0221481 27.873 818 489 33 60 808 64 849 1.09e-57 214
Msa0802610 MtrunA17_Chr1g0164581 27.529 959 569 32 168 1045 166 1079 2.25e-57 216
Msa0802610 MtrunA17_Chr3g0085801 25.293 1024 558 36 114 1052 143 1044 2.74e-57 215
Msa0802610 MtrunA17_Chr2g0299121 29.443 754 425 31 149 834 168 882 2.88e-57 215
Msa0802610 MtrunA17_Chr8g0346831 27.129 951 457 30 145 1032 164 941 3.41e-57 214
Msa0802610 MtrunA17_Chr3g0091011 28.513 733 454 26 149 834 156 865 4.28e-57 214
Msa0802610 MtrunA17_Chr6g0467961 28.385 842 485 33 61 839 61 847 1.05e-56 212
Msa0802610 MtrunA17_Chr2g0299091 27.717 920 489 37 171 1016 162 979 1.28e-56 213
Msa0802610 MtrunA17_Chr1g0147141 25.725 1104 666 43 6 1019 24 1063 3.87e-56 212
Msa0802610 MtrunA17_Chr8g0352211 27.150 965 474 34 145 1050 1162 1956 1.75e-55 211
Msa0802610 MtrunA17_Chr3g0083721 27.918 831 517 31 146 928 119 915 2.52e-55 208
Msa0802610 MtrunA17_Chr5g0430951 26.517 890 545 26 20 845 17 861 3.51e-55 207
Msa0802610 MtrunA17_Chr3g0082311 25.949 1106 641 43 34 1019 40 1087 3.52e-55 209
Msa0802610 MtrunA17_Chr3g0085551 28.302 742 443 27 133 805 31 752 3.71e-55 206
Msa0802610 MtrunA17_Chr1g0164391 25.554 1084 674 42 34 1029 40 1078 4.04e-55 209
Msa0802610 MtrunA17_Chr3g0082101 27.778 810 443 30 81 834 115 838 5.75e-55 207
Msa0802610 MtrunA17_Chr3g0086741 29.958 711 425 26 148 807 180 868 1.60e-54 205
Msa0802610 MtrunA17_Chr3g0113781 29.420 741 439 30 228 934 52 742 2.16e-54 203
Msa0802610 MtrunA17_Chr5g0417251 28.073 659 410 23 229 862 35 654 2.18e-54 201
Msa0802610 MtrunA17_Chr3g0084811 27.214 926 574 36 103 963 277 1167 5.38e-54 206
Msa0802610 MtrunA17_Chr6g0467911 27.842 783 456 30 29 742 30 772 3.11e-53 200
Msa0802610 MtrunA17_Chr1g0168901 28.554 823 480 35 149 914 145 916 1.44e-52 200
Msa0802610 MtrunA17_Chr6g0484551 27.372 917 524 40 4 841 9 862 1.92e-52 199
Msa0802610 MtrunA17_Chr3g0082351 26.231 995 608 37 108 1026 137 1081 4.93e-52 199
Msa0802610 MtrunA17_Chr3g0082391 27.522 803 473 32 34 757 40 812 1.54e-51 195
Msa0802610 MtrunA17_Chr5g0415551 27.008 722 424 27 133 793 15 694 1.53e-50 191
Msa0802610 MtrunA17_Chr8g0355411 27.719 754 431 27 61 746 67 774 2.51e-50 192
Msa0802610 MtrunA17_Chr8g0355411 38.217 157 88 3 899 1051 686 837 3.61e-18 90.1
Msa0802610 MtrunA17_Chr5g0413811 28.399 662 390 25 210 834 31 645 3.14e-50 189
Msa0802610 MtrunA17_Chr5g0413811 39.416 137 80 2 920 1056 536 669 1.49e-14 78.2
Msa0802610 MtrunA17_Chr3g0091971 26.220 1045 608 44 69 1045 78 1027 1.09e-49 192
Msa0802610 MtrunA17_Chr3g0113481 29.474 665 389 22 124 736 132 768 4.60e-49 187
Msa0802610 MtrunA17_Chr3g0082321 26.427 806 459 30 34 776 40 774 1.73e-48 186
Msa0802610 MtrunA17_Chr5g0430341 27.864 646 336 17 417 1056 11 532 2.55e-48 181
Msa0802610 MtrunA17_Chr3g0091121 28.994 676 428 25 355 1017 28 664 1.55e-46 178
Msa0802610 MtrunA17_Chr1g0164631 25.382 851 498 32 61 805 70 889 4.76e-46 180
Msa0802610 MtrunA17_Chr8g0351811 29.431 598 318 20 516 1050 58 614 3.18e-45 174
Msa0802610 MtrunA17_Chr3g0086071 28.507 663 385 27 350 987 15 613 1.55e-42 166
Msa0802610 MtrunA17_Chr5g0414211 31.068 412 255 13 645 1052 2 388 3.57e-42 160
Msa0802610 MtrunA17_Chr5g0415481 32.468 385 231 11 383 759 6 369 1.14e-41 159
Msa0802610 MtrunA17_Chr3g0089911 26.187 695 396 26 6 618 11 670 2.95e-41 162
Msa0802610 MtrunA17_Chr4g0071011 28.873 568 309 20 494 1050 14 497 1.08e-40 157
Msa0802610 MtrunA17_Chr3g0085711 27.709 729 438 26 389 1050 2 708 1.57e-39 157
Msa0802610 MtrunA17_Chr6g0468361 28.721 477 278 17 347 806 1 432 1.13e-38 150
Msa0802610 MtrunA17_Chr5g0414161 34.957 349 193 16 524 864 55 377 2.79e-38 148
Msa0802610 MtrunA17_Chr3g0082371 30.394 431 253 16 355 776 40 432 1.77e-37 147
Msa0802610 MtrunA17_Chr8g0338671 29.167 504 293 20 145 601 46 532 6.45e-37 148
Msa0802610 MtrunA17_Chr4g0020501 25.086 877 449 36 151 936 130 889 1.26e-36 149
Msa0802610 MtrunA17_Chr3g0089441 30.058 519 297 19 525 1029 84 550 1.36e-36 149
Msa0802610 MtrunA17_Chr6g0468111 26.538 569 329 20 101 640 1 509 1.96e-36 145
Msa0802610 MtrunA17_Chr8g0337891 28.151 611 349 23 61 606 65 650 1.97e-36 148
Msa0802610 MtrunA17_Chr7g0257541 26.221 614 360 23 61 598 67 663 1.45e-35 146
Msa0802610 MtrunA17_Chr7g0257541 31.278 227 140 5 831 1052 644 859 5.05e-14 77.0
Msa0802610 MtrunA17_Chr6g0468381 30.905 453 249 17 638 1050 76 504 8.14e-35 141
Msa0802610 MtrunA17_Chr7g0218941 24.492 1033 556 35 83 1061 109 971 9.54e-35 144
Msa0802610 MtrunA17_Chr7g0257221 27.886 563 319 21 107 600 122 666 2.65e-34 142
Msa0802610 MtrunA17_Chr7g0257221 31.875 160 106 2 898 1056 705 862 5.25e-12 70.5
Msa0802610 MtrunA17_Chr5g0409991 27.273 693 406 27 171 805 181 833 1.77e-33 139
Msa0802610 MtrunA17_Chr5g0430901 32.181 376 213 11 603 976 526 861 3.98e-33 138
Msa0802610 MtrunA17_Chr7g0257191 27.611 565 315 22 107 598 122 665 4.40e-33 138
Msa0802610 MtrunA17_Chr1g0189551 27.768 551 318 22 106 600 145 671 4.90e-33 138
Msa0802610 MtrunA17_Chr5g0404741 27.581 649 375 26 174 759 191 807 1.08e-32 137
Msa0802610 MtrunA17_Chr5g0410001 23.972 851 495 31 60 806 59 861 2.08e-32 136
Msa0802610 MtrunA17_Chr7g0257201 26.235 648 349 25 61 625 65 666 2.37e-32 135
Msa0802610 MtrunA17_Chr6g0471941 24.515 979 525 37 60 931 64 935 2.66e-30 129
Msa0802610 MtrunA17_Chr6g0471941 29.917 361 183 11 705 1050 653 958 2.04e-27 120
Msa0802610 MtrunA17_Chr8g0338861 27.344 512 230 16 565 1050 271 666 4.20e-30 127
Msa0802610 MtrunA17_Chr8g0338861 26.818 660 374 25 256 838 1 628 1.43e-26 116
Msa0802610 MtrunA17_Chr6g0468251 28.795 448 264 12 631 1050 13 433 1.26e-29 124
Msa0802610 MtrunA17_Chr5g0410021 24.850 833 482 33 60 805 60 835 1.68e-29 127
Msa0802610 MtrunA17_Chr6g0468341 27.542 472 242 16 638 1050 468 898 1.95e-29 126
Msa0802610 MtrunA17_Chr6g0468341 23.753 421 252 13 61 424 61 469 1.22e-18 92.0
Msa0802610 MtrunA17_Chr4g0037421 23.980 809 459 31 107 807 153 913 2.26e-29 126
Msa0802610 MtrunA17_Chr5g0433771 26.889 569 316 25 100 598 116 654 3.48e-29 125
Msa0802610 MtrunA17_Chr5g0433771 35.032 157 99 2 896 1051 695 849 3.33e-12 70.9
Msa0802610 MtrunA17_Chr2g0299001 24.944 890 486 38 61 838 61 880 3.66e-29 125
Msa0802610 MtrunA17_Chr8g0338261 29.775 356 186 9 705 1052 631 930 4.25e-29 125
Msa0802610 MtrunA17_Chr8g0338261 25.800 531 303 20 107 576 124 624 5.80e-27 119
Msa0802610 MtrunA17_Chr6g0468131 29.086 361 214 8 715 1050 3 346 5.62e-29 119
Msa0802610 MtrunA17_Chr5g0410031 23.975 805 456 35 60 762 60 810 7.67e-29 125
Msa0802610 MtrunA17_Chr8g0338391 26.121 647 365 25 60 610 64 693 1.01e-28 124
Msa0802610 MtrunA17_Chr8g0338391 28.198 383 177 13 705 1062 652 961 9.38e-16 82.4
Msa0802610 MtrunA17_Chr6g0475491 27.811 507 287 21 149 601 168 649 1.10e-28 124
Msa0802610 MtrunA17_Chr6g0475491 35.417 144 71 3 725 856 696 829 3.75e-14 77.4
Msa0802610 MtrunA17_Chr8g0338431 25.037 683 336 22 386 1052 1 523 1.16e-28 122
Msa0802610 MtrunA17_Chr8g0338361 28.286 350 196 10 145 446 28 370 1.25e-28 121
Msa0802610 MtrunA17_Chr3g0101321 25.072 694 418 31 168 805 187 834 1.99e-28 123
Msa0802610 MtrunA17_Chr3g0100961 23.968 872 438 36 61 806 66 838 4.04e-28 122
Msa0802610 MtrunA17_Chr1g0169951 26.809 608 330 24 107 646 122 682 4.63e-28 122
Msa0802610 MtrunA17_Chr2g0299141 29.665 418 235 19 257 638 20 414 6.67e-28 117
Msa0802610 MtrunA17_Chr7g0248221 26.471 510 291 21 149 600 167 650 1.00e-27 121
Msa0802610 MtrunA17_Chr8g0392511 30.110 362 224 14 383 731 1 346 1.11e-27 115
Msa0802610 MtrunA17_Chr3g0091041 27.957 372 205 14 112 446 145 490 1.39e-27 118
Msa0802610 MtrunA17_Chr3g0081211 21.889 667 385 20 153 736 181 794 1.52e-27 120
Msa0802610 MtrunA17_Chr3g0091961 30.245 367 214 16 309 654 39 384 1.98e-27 116
Msa0802610 MtrunA17_Chr3g0112511 23.077 832 491 32 61 804 61 831 3.27e-27 119
Msa0802610 MtrunA17_Chr5g0415511 26.908 524 296 23 147 591 165 680 3.65e-27 119
Msa0802610 MtrunA17_Chr5g0415511 38.971 136 80 1 920 1055 565 697 3.11e-16 84.0
Msa0802610 MtrunA17_Chr4g0051651 25.581 645 361 28 28 575 48 670 4.59e-27 118
Msa0802610 MtrunA17_Chr3g0081391 23.678 832 486 32 92 838 111 878 4.69e-27 119
Msa0802610 MtrunA17_Chr8g0338621 27.184 515 301 20 145 612 164 651 6.08e-27 117
Msa0802610 MtrunA17_Chr2g0309151 28.398 412 250 16 210 598 43 432 8.24e-27 115
Msa0802610 MtrunA17_Chr3g0101221 23.752 741 454 25 161 838 187 879 1.40e-26 117
Msa0802610 MtrunA17_Chr3g0101251 22.691 758 461 30 153 861 182 863 2.98e-26 116
Msa0802610 MtrunA17_Chr3g0081361 23.740 754 426 29 119 774 163 865 3.16e-26 116
Msa0802610 MtrunA17_Chr3g0101011 23.629 711 392 27 146 760 177 832 3.28e-26 116
Msa0802610 MtrunA17_Chr5g0409971 25.516 678 387 25 161 762 175 810 1.32e-25 114
Msa0802610 MtrunA17_Chr3g0100971 22.546 754 428 25 1 647 1 705 1.38e-25 114
Msa0802610 MtrunA17_Chr3g0085431 27.647 510 283 21 350 834 47 495 1.39e-25 112
Msa0802610 MtrunA17_Chr1g0197241 24.289 774 447 27 148 838 798 1515 2.42e-25 114
Msa0802610 MtrunA17_Chr8g0344071 23.810 525 328 17 101 576 395 896 5.64e-25 112
Msa0802610 MtrunA17_Chr3g0101181 24.110 730 419 29 153 804 190 862 1.52e-24 110
Msa0802610 MtrunA17_Chr3g0081341 22.893 795 462 29 88 774 172 923 1.69e-24 110
Msa0802610 MtrunA17_Chr3g0080791 23.295 777 449 30 61 736 65 795 2.52e-24 110
Msa0802610 MtrunA17_Chr3g0094301 24.341 645 369 23 169 736 194 796 3.41e-24 110
Msa0802610 MtrunA17_Chr7g0229761 24.341 645 369 23 169 736 194 796 3.41e-24 110
Msa0802610 MtrunA17_Chr3g0101201 23.498 749 450 27 153 838 188 876 3.60e-24 109
Msa0802610 MtrunA17_Chr3g0101231 24.465 748 449 29 153 838 191 884 4.39e-24 109
Msa0802610 MtrunA17_Chr8g0338251 27.027 481 292 15 141 576 145 611 8.47e-24 108
Msa0802610 MtrunA17_Chr8g0338251 33.835 133 71 2 716 841 626 748 1.02e-11 69.3
Msa0802610 MtrunA17_Chr3g0081191 22.252 755 435 28 119 774 154 855 8.60e-24 108
Msa0802610 MtrunA17_Chr3g0080771 22.687 670 396 25 142 736 173 795 9.99e-24 108
Msa0802610 MtrunA17_Chr3g0101241 24.534 697 405 25 173 804 174 814 1.15e-23 108
Msa0802610 MtrunA17_Chr3g0101271 24.534 697 405 25 173 804 174 814 1.26e-23 108
Msa0802610 MtrunA17_Chr3g0100761 23.230 551 319 16 168 647 148 665 1.48e-23 107
Msa0802610 MtrunA17_Chr1g0189351 23.227 818 475 30 108 834 124 879 2.17e-23 107
Msa0802610 MtrunA17_Chr3g0080731 23.184 647 376 23 168 736 193 796 3.41e-23 106
Msa0802610 MtrunA17_Chr3g0080751 22.606 637 393 21 168 736 193 797 3.95e-23 106
Msa0802610 MtrunA17_Chr3g0081181 22.761 536 334 17 108 576 124 646 6.58e-23 105
Msa0802610 MtrunA17_Chr3g0080741 23.484 643 379 21 168 736 195 798 8.84e-23 105
Msa0802610 MtrunA17_Chr5g0414231 23.904 502 305 18 9 442 5 497 4.39e-22 101
Msa0802610 MtrunA17_Chr3g0100801 22.507 742 432 27 60 736 63 726 8.83e-22 101
Msa0802610 MtrunA17_Chr3g0085701 25.651 499 304 17 609 1050 457 945 1.04e-21 102
Msa0802610 MtrunA17_Chr3g0085701 22.137 393 240 12 56 392 55 437 8.27e-17 85.9
Msa0802610 MtrunA17_Chr6g0468331 24.144 613 372 25 61 603 61 650 1.60e-21 100
Msa0802610 MtrunA17_Chr6g0468331 32.222 180 117 2 871 1050 497 671 3.87e-17 86.7
Msa0802610 MtrunA17_Chr3g0081371 23.803 710 416 24 154 774 192 865 3.15e-21 100
Msa0802610 MtrunA17_Chr5g0417301 23.322 596 342 19 44 589 45 575 3.32e-21 99.4
Msa0802610 MtrunA17_Chr7g0219851 24.501 551 305 23 174 630 182 715 3.51e-21 100
Msa0802610 MtrunA17_Chr3g0089431 23.414 457 270 15 6 392 11 457 5.03e-21 97.8
Msa0802610 MtrunA17_Chr3g0080601 24.309 543 303 17 168 616 192 720 7.06e-21 99.4
Msa0802610 MtrunA17_Chr3g0100731 24.486 584 355 21 226 766 33 573 1.01e-20 98.2
Msa0802610 MtrunA17_Chr3g0100681 24.319 551 311 19 168 647 4 519 1.47e-20 97.4
Msa0802610 MtrunA17_Chr3g0089931 26.243 503 294 21 23 470 32 512 1.78e-20 96.7
Msa0802610 MtrunA17_Chr6g0467921 28.197 305 152 7 790 1050 20 301 2.95e-20 93.6
Msa0802610 MtrunA17_Chr1g0151481 23.462 699 407 26 153 775 183 829 5.73e-20 96.3
Msa0802610 MtrunA17_Chr3g0080721 27.053 414 258 14 355 754 168 551 6.26e-20 95.5
Msa0802610 MtrunA17_Chr3g0100831 22.727 792 482 31 61 766 66 813 1.31e-19 95.1
Msa0802610 MtrunA17_Chr1g0197201 22.914 755 450 29 174 838 615 1327 3.74e-19 94.0
Msa0802610 MtrunA17_Chr3g0100851 22.070 657 399 23 137 736 60 660 4.45e-19 93.2
Msa0802610 MtrunA17_Chr2g0282891 32.540 252 157 7 381 630 110 350 5.30e-19 90.1
Msa0802610 MtrunA17_Chr3g0080631 21.932 766 429 29 61 736 65 751 7.41e-19 92.4
Msa0802610 MtrunA17_Chr6g0468261 30.471 361 199 11 721 1052 3 340 1.47e-18 89.0
Msa0802610 MtrunA17_Chr4g0071021 25.618 445 247 17 20 404 17 437 2.07e-18 89.4
Msa0802610 MtrunA17_Chr7g0255751 37.725 167 100 4 537 701 50 214 5.92e-18 84.3
Msa0802610 MtrunA17_Chr1g0159111 23.086 849 470 37 109 853 114 883 6.25e-18 89.7
Msa0802610 MtrunA17_Chr3g0078361 24.615 455 261 17 181 568 2 441 1.54e-17 86.7
Msa0802610 MtrunA17_Chr3g0084351 23.496 532 304 17 108 566 54 555 1.61e-17 87.4
Msa0802610 MtrunA17_Chr3g0080651 25.490 408 234 14 355 736 348 711 5.91e-16 83.2
Msa0802610 MtrunA17_Chr8g0355071 30.342 234 137 9 216 427 72 301 1.40e-14 75.9
Msa0802610 MtrunA17_Chr7g0248431 24.868 378 218 16 149 470 167 534 1.97e-13 74.3
Msa0802610 MtrunA17_Chr5g0417291 26.829 205 124 5 620 820 11 193 2.35e-13 70.1
Msa0802610 MtrunA17_Chr4g0010491 27.660 423 246 19 10 378 10 426 2.40e-13 73.6
Msa0802610 MtrunA17_Chr4g0010481 29.891 184 99 5 433 613 25 181 2.84e-13 69.3
Msa0802610 MtrunA17_Chr8g0338681 30.481 187 107 6 226 392 44 227 3.01e-13 70.9
Msa0802610 MtrunA17_Chr3g0089921 28.840 319 198 14 702 1011 2 300 6.70e-13 72.8
Msa0802610 MtrunA17_Chr2g0308491 26.744 258 145 11 161 376 3 258 8.11e-13 69.7
Msa0802610 MtrunA17_Chr3g0101211 22.295 305 189 6 181 441 2 302 1.51e-12 70.9
Msa0802610 MtrunA17_Chr5g0414221 37.273 110 64 3 516 625 43 147 1.54e-12 66.2
Msa0802610 MtrunA17_Chr3g0100701 24.775 444 256 20 381 806 284 667 2.10e-12 71.6
Msa0802610 MtrunA17_Chr3g0089941 29.878 164 104 4 673 834 14 168 5.40e-12 66.6
Msa0802610 MtrunA17_Chr2g0313491 21.533 1096 613 45 61 1011 71 1064 1.30e-11 69.3
Msa0802610 MtrunA17_Chr6g0482351 28.438 320 176 13 730 1029 717 1003 1.76e-11 68.9
Msa0802610 MtrunA17_Chr5g0416571 23.256 301 176 9 31 296 28 308 4.74e-11 65.5
Msa0802610 MtrunA17_Chr3g0092291 29.091 220 136 8 389 602 2 207 6.99e-11 65.5
Msa0802610 MtrunA17_Chr8g0382411 25.212 353 192 12 719 1026 41 366 8.45e-11 65.5
Msa0802610 MtrunA17_Chr1g0169941 25.484 310 191 12 210 496 35 327 9.19e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0802610 AT3G14470.1 27.892 925 527 41 94 936 123 989 1.21e-64 238
Msa0802610 AT3G14470.2 27.892 925 527 41 94 936 123 989 1.21e-64 238
Msa0802610 AT3G14460.1 29.167 720 425 26 170 834 191 880 2.97e-58 220
Msa0802610 AT3G50950.2 22.843 788 480 29 20 725 17 758 3.72e-27 119
Msa0802610 AT3G50950.1 22.843 788 480 29 20 725 17 758 3.72e-27 119
Msa0802610 AT3G46530.1 26.033 484 267 17 174 598 187 638 3.20e-24 110
Msa0802610 AT3G46710.1 24.252 635 397 19 27 598 25 638 2.65e-22 103
Msa0802610 AT3G07040.1 24.303 502 299 14 153 598 179 655 1.39e-21 102
Msa0802610 AT3G46730.1 24.017 483 294 12 149 577 162 625 3.42e-20 97.4
Msa0802610 AT1G12280.1 23.264 576 349 22 61 576 75 617 3.34e-18 90.9
Msa0802610 AT1G58410.1 24.432 528 332 17 174 646 184 699 8.79e-18 89.7
Msa0802610 AT1G58410.4 24.432 528 332 17 174 646 184 699 8.79e-18 89.7
Msa0802610 AT1G58410.2 24.432 528 332 17 174 646 184 699 8.79e-18 89.7
Msa0802610 AT1G58390.1 24.449 544 322 22 172 646 183 706 6.52e-17 86.7
Msa0802610 AT1G58390.2 24.449 544 322 22 172 646 183 706 6.52e-17 86.7
Msa0802610 AT4G27220.1 25.042 591 347 24 105 635 73 627 3.41e-16 84.3
Msa0802610 AT4G27220.2 25.042 591 347 24 105 635 81 635 3.61e-16 84.3
Msa0802610 AT1G50180.1 25.049 507 282 19 168 601 181 662 1.60e-15 82.0
Msa0802610 AT1G53350.1 23.387 620 371 24 99 646 110 697 9.42e-15 79.7
Msa0802610 AT3G44480.2 35.556 135 84 2 898 1032 738 869 3.71e-14 77.8
Msa0802610 AT3G44480.3 35.556 135 84 2 898 1032 738 869 3.92e-14 77.8
Msa0802610 AT3G44480.5 35.556 135 84 2 898 1032 738 869 3.92e-14 77.8
Msa0802610 AT3G44480.4 35.556 135 84 2 898 1032 738 869 4.14e-14 77.8
Msa0802610 AT3G44480.1 35.556 135 84 2 898 1032 738 869 4.14e-14 77.8
Msa0802610 AT4G27190.1 24.242 528 307 24 171 634 163 661 4.84e-14 77.4
Msa0802610 AT1G69550.1 26.157 562 333 19 535 1040 682 1217 1.11e-13 76.6
Msa0802610 AT1G69550.1 26.288 563 295 18 524 1044 765 1249 6.31e-13 73.9
Msa0802610 AT4G26090.1 21.476 759 442 28 173 825 176 886 1.54e-13 75.9
Msa0802610 AT1G12290.4 24.398 623 374 27 41 600 12 600 5.23e-13 73.9
Msa0802610 AT1G12290.3 24.398 623 374 27 41 600 12 600 5.23e-13 73.9
Msa0802610 AT1G12290.2 24.398 623 374 27 41 600 12 600 5.23e-13 73.9
Msa0802610 AT1G12290.1 23.756 623 378 25 41 600 54 642 5.80e-13 73.9
Msa0802610 AT3G04220.1 34.307 137 88 2 898 1034 716 850 5.22e-12 70.9
Msa0802610 AT3G04220.3 34.307 137 88 2 898 1034 745 879 6.18e-12 70.5
Msa0802610 AT1G10920.1 22.296 453 283 17 172 564 60 503 1.98e-11 68.9
Msa0802610 AT1G10920.2 22.296 453 283 17 172 564 60 503 1.98e-11 68.9
Msa0802610 AT1G10920.4 22.296 453 283 17 172 564 60 503 1.98e-11 68.9
Msa0802610 AT5G17680.2 24.781 343 222 8 705 1024 580 909 4.03e-11 68.2
Msa0802610 AT5G17680.1 24.781 343 222 8 705 1024 579 908 4.28e-11 68.2
Msa0802610 AT4G16890.3 24.521 522 291 21 525 1028 570 1006 8.46e-11 67.0
Msa0802610 AT1G51480.1 22.998 487 297 17 171 600 172 637 8.98e-11 66.6

Find 218 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACTATGGCTTGCAAATT+TGG 0.078811 5_3:-17135626 Msa0802610:CDS
TCTGCATACTTTGATCATTT+TGG 0.099646 5_3:-17133046 Msa0802610:CDS
CCTCAAATCACTTGAGAAAT+TGG 0.148004 5_3:-17133127 Msa0802610:CDS
TTCATATCCCCAATAGATTT+TGG 0.161551 5_3:+17134491 None:intergenic
TTCACCTCTCAAGTATTAAA+TGG 0.168667 5_3:-17133299 Msa0802610:CDS
TCGTGCTAGGTCGTGCATTA+AGG 0.206665 5_3:+17134799 None:intergenic
TTTCATCAATGGTTTCTTTC+AGG 0.208590 5_3:+17136216 None:intergenic
GTAACTTGTCTACAGTATTA+AGG 0.211065 5_3:+17134444 None:intergenic
TCAAATTTCTCGAACTTCTA+AGG 0.219802 5_3:-17133845 Msa0802610:CDS
GTTAGCTTGATAATGGAATT+TGG 0.230372 5_3:+17134422 None:intergenic
TCTTCCATGTCTTTGAAAAT+AGG 0.235746 5_3:+17134860 None:intergenic
CAAATTGGTTAGCTTGATAA+TGG 0.245130 5_3:+17134415 None:intergenic
CAATTTCAACGTTTGCAAAT+TGG 0.248837 5_3:+17134400 None:intergenic
GCAGTTTAGTTGAAACTTCT+TGG 0.256600 5_3:+17135880 None:intergenic
ACTACTGGTGGTAGTGTTCT+TGG 0.300362 5_3:+17135857 None:intergenic
GAAAACTAATCCATACATTT+AGG 0.301458 5_3:-17132938 None:intergenic
GAGTTGGCCCCATCTATAAT+TGG 0.303790 5_3:-17135795 Msa0802610:CDS
AGCTAAGGGCCATTCTCTTT+TGG 0.305619 5_3:-17134637 Msa0802610:CDS
AAGACATTGCCAAAATCTAT+TGG 0.308999 5_3:-17134500 Msa0802610:CDS
AATTAGTTCATCAATGTTCT+TGG 0.326875 5_3:+17134349 None:intergenic
TGACGAGGTGCTTGGTGATT+TGG 0.329280 5_3:-17135493 Msa0802610:CDS
TAAAATCAAAAGAAGCTCTT+AGG 0.336697 5_3:+17134711 None:intergenic
AAGTGATTTGAGGTTGTCTA+TGG 0.340838 5_3:+17133137 None:intergenic
AGACATTGCCAAAATCTATT+GGG 0.344472 5_3:-17134499 Msa0802610:CDS
TCCGTATTGGTTTCCTTACA+TGG 0.361783 5_3:-17133943 Msa0802610:CDS
TGCAGTTTACTTTCCATCCT+TGG 0.363517 5_3:-17133748 Msa0802610:CDS
GATCATTGACAGCAGTCTTA+AGG 0.370063 5_3:+17136039 None:intergenic
TCCACCTTCTTTGTTTCAAA+AGG 0.375359 5_3:-17134666 Msa0802610:CDS
ATTGTTGGATTCGCAGGAAT+CGG 0.377799 5_3:-17135696 Msa0802610:CDS
TTCTCGAAGTCCTAAATGTA+TGG 0.379935 5_3:+17132928 None:intergenic
AAAAGGCAACCTTGTTATAC+TGG 0.380267 5_3:-17135541 Msa0802610:CDS
AGTTCGAGAAATTTGAGGTT+TGG 0.383699 5_3:+17133852 None:intergenic
GTTTCTGTGGTTACCATTGT+TGG 0.386204 5_3:-17135711 Msa0802610:CDS
ACCTGCGTTCTTTAACCATA+AGG 0.387328 5_3:-17133263 Msa0802610:CDS
AGAAACTTGTCATTAAAGAT+TGG 0.389105 5_3:-17133407 Msa0802610:CDS
CCAATTTCTCAAGTGATTTG+AGG 0.391994 5_3:+17133127 None:intergenic
CCTTGCAAGGATTTCATCAA+TGG 0.393769 5_3:+17136205 None:intergenic
TAACTTGTCTACAGTATTAA+GGG 0.394196 5_3:+17134445 None:intergenic
ACAAACGCTTTCTCTCTTTG+TGG 0.395110 5_3:-17134246 Msa0802610:CDS
AGTATTTCAACGACTTTGTT+GGG 0.401770 5_3:-17134886 Msa0802610:CDS
GGCCAATCATCACCGGTATC+TGG 0.407360 5_3:+17132994 None:intergenic
TTTGAATATTTGACTATAAG+TGG 0.409909 5_3:+17134571 None:intergenic
CCTGCGTTCTTTAACCATAA+GGG 0.410194 5_3:-17133262 Msa0802610:CDS
GAGTATTTCAACGACTTTGT+TGG 0.413847 5_3:-17134887 Msa0802610:CDS
TGTCAATGATCTGAATGATT+TGG 0.417302 5_3:-17136027 Msa0802610:intron
TTGAAGCATCTTGAGCTAGA+TGG 0.418670 5_3:-17134323 Msa0802610:CDS
CCGGTATCTGGCTGACATCT+TGG 0.419547 5_3:+17133006 None:intergenic
GAGCAAATCAAAGATAACTA+TGG 0.421006 5_3:-17135639 Msa0802610:CDS
GTCAAAAGGTTCCTCCAGTC+TGG 0.421453 5_3:-17136070 Msa0802610:CDS
GTCAGATGATCGAAACCTTT+GGG 0.424915 5_3:+17133366 None:intergenic
AACAGAAAATTATGATGGAT+TGG 0.425339 5_3:-17135171 Msa0802610:CDS
CATTCGGAGAGTGGTCTTGA+AGG 0.428256 5_3:+17134547 None:intergenic
GTCTTCTCCGATACTTCTTT+AGG 0.429690 5_3:+17135831 None:intergenic
TTAGAAGTTCGAGAAATTTG+AGG 0.430073 5_3:+17133847 None:intergenic
AAGATATTAATGACATCTAA+TGG 0.432337 5_3:-17135468 Msa0802610:CDS
AAGTCATCTACTTCCGTTGA+AGG 0.435170 5_3:-17135564 Msa0802610:CDS
CGTGCTAGGTCGTGCATTAA+GGG 0.436710 5_3:+17134800 None:intergenic
ATTAGTTCATCAATGTTCTT+GGG 0.437052 5_3:+17134350 None:intergenic
ATCTTGTTCAACACAAATCC+TGG 0.438987 5_3:-17135744 Msa0802610:CDS
TCTCTCTTTGTGGTTAGTGA+GGG 0.439088 5_3:-17134236 Msa0802610:CDS
AGTTATGAAGCTGAAGATCT+TGG 0.439168 5_3:+17133187 None:intergenic
TTAACAAGCGATTCCATGTA+AGG 0.441569 5_3:+17133930 None:intergenic
TAGGTAAAACACTTCCGTAT+TGG 0.442432 5_3:-17133956 Msa0802610:CDS
GGTCAGATGATCGAAACCTT+TGG 0.444140 5_3:+17133365 None:intergenic
ATTTCTCGAACTTCTAAGGT+TGG 0.444278 5_3:-17133841 Msa0802610:CDS
CTGAGAGCAATTTCTATTGT+GGG 0.450475 5_3:-17133984 Msa0802610:CDS
TTCAGGGTCTTACGTTAAGA+TGG 0.456854 5_3:-17134085 Msa0802610:CDS
AGCCAGATACCGGTGATGAT+TGG 0.460501 5_3:-17132996 Msa0802610:CDS
GTGTGCAGCACGGTCTTTGA+GGG 0.460648 5_3:+17135587 None:intergenic
AAAACTGAAGACTCTTCCAT+TGG 0.462781 5_3:-17133232 Msa0802610:CDS
CAAGACCACTCTCCGAATGC+TGG 0.463628 5_3:-17134543 Msa0802610:CDS
ATTTCTATTGTGGGGTACAT+AGG 0.463843 5_3:-17133975 Msa0802610:CDS
TGTGTGCAGCACGGTCTTTG+AGG 0.464204 5_3:+17135586 None:intergenic
CTACTGGTGGTAGTGTTCTT+GGG 0.466679 5_3:+17135858 None:intergenic
CAACCTAACAGTAATATTGT+TGG 0.466957 5_3:+17135404 None:intergenic
AATTGAACAGAAAATTATGA+TGG 0.468562 5_3:-17135176 Msa0802610:CDS
TGCTTAATGAAGTGGAATCT+TGG 0.468745 5_3:-17135255 Msa0802610:CDS
TTGTTGGATTCGCAGGAATC+GGG 0.472197 5_3:-17135695 Msa0802610:CDS
GGAGTTTCTAGAATATCTTA+AGG 0.474508 5_3:-17135074 Msa0802610:CDS
GTCGATCACCACCAGAGTAT+TGG 0.476687 5_3:-17133452 Msa0802610:CDS
ATCATCATCGTCGTCCAAGC+TGG 0.479449 5_3:+17134133 None:intergenic
TCACCTCTCAAGTATTAAAT+GGG 0.481515 5_3:-17133298 Msa0802610:CDS
TCTACTTCCGTTGAAGGAAA+AGG 0.484283 5_3:-17135558 Msa0802610:CDS
GAACCACGTCCCAGGTCAAA+AGG 0.485420 5_3:-17136084 Msa0802610:CDS
CTTTCCCGTGCTTAATGAAG+TGG 0.486762 5_3:-17135263 Msa0802610:CDS
GTTACCATTGTTGGATTCGC+AGG 0.487055 5_3:-17135702 Msa0802610:CDS
AGTTGGCCCCATCTATAATT+GGG 0.489979 5_3:-17135794 Msa0802610:CDS
TCGAGAGATTAATTCATCTC+TGG 0.490659 5_3:-17134967 Msa0802610:CDS
ACTCGCCCGTCTCATCTTCG+AGG 0.491317 5_3:-17135664 Msa0802610:CDS
TTCCACCATTTCCTGAGGTT+AGG 0.492472 5_3:+17133702 None:intergenic
AATACGTCATGGCAGGAGAA+AGG 0.493715 5_3:-17133526 Msa0802610:CDS
ATTGTCCTAACCTCAGGAAA+TGG 0.495171 5_3:-17133707 Msa0802610:CDS
TTCAAAAGGCAAAGAAGCTA+AGG 0.496303 5_3:-17134652 Msa0802610:CDS
TTGCATCTTCCAAAAGAGAA+TGG 0.496813 5_3:+17134628 None:intergenic
TTCTCTCTTTGTGGTTAGTG+AGG 0.496960 5_3:-17134237 Msa0802610:CDS
TTTCAGGACAACTATATCCA+TGG 0.498985 5_3:+17136232 None:intergenic
TCAGACAAAGAAGTCATTTG+AGG 0.499703 5_3:+17133162 None:intergenic
AGTGGCATGCAAGTTAGGTC+AGG 0.500455 5_3:+17133612 None:intergenic
TATTTCAAAGTTTGATGTGA+AGG 0.501610 5_3:-17135203 Msa0802610:CDS
ACGATTCGTATCAGATCAAA+TGG 0.502035 5_3:-17134780 Msa0802610:CDS
GCAAATTTGGATTGATGATG+TGG 0.505143 5_3:-17135613 Msa0802610:CDS
TTGGGGATATGAATAATTTG+AGG 0.505521 5_3:-17134481 Msa0802610:CDS
GCTGTGAATGATATCAAGAA+AGG 0.506664 5_3:+17135139 None:intergenic
ACATCTTGAAAGATCCAGCT+TGG 0.508258 5_3:-17134147 Msa0802610:CDS
CTCTCTTTGTGGTTAGTGAG+GGG 0.508659 5_3:-17134235 Msa0802610:CDS
TACTTCTTTAGGCGGACTAC+TGG 0.508896 5_3:+17135842 None:intergenic
TTCAAAGTTTGATGTGAAGG+AGG 0.509916 5_3:-17135200 Msa0802610:CDS
CCAAGATGTCAGCCAGATAC+CGG 0.520727 5_3:-17133006 Msa0802610:CDS
AGAAATTGCTCTCAGTTCAG+AGG 0.521665 5_3:+17133992 None:intergenic
AGATCAAATGGAGAATGTTA+CGG 0.524841 5_3:-17134768 Msa0802610:CDS
GTGCTCGTGTTCATGTCCTT+CGG 0.527122 5_3:+17134596 None:intergenic
TGACGTATTGTTTCAAGTAG+TGG 0.527468 5_3:+17133540 None:intergenic
ACTGAGAGCAATTTCTATTG+TGG 0.527505 5_3:-17133985 Msa0802610:CDS
ATTCATCTCTGGACAGCAGA+AGG 0.529104 5_3:-17134956 Msa0802610:CDS
CAAGGGAAGGTATCCTTGCA+AGG 0.529125 5_3:+17136192 None:intergenic
TCCATGTAAGGAAACCAATA+CGG 0.529805 5_3:+17133942 None:intergenic
TGTCATGGAGATCCAGCATT+CGG 0.530245 5_3:+17134531 None:intergenic
CAACAACTTACGAGGCCACT+TGG 0.532721 5_3:-17134177 Msa0802610:CDS
AAACTGAAGACTCTTCCATT+GGG 0.533705 5_3:-17133231 Msa0802610:CDS
ATACGTCATGGCAGGAGAAA+GGG 0.534502 5_3:-17133525 Msa0802610:CDS
TTAAGGTTTCGCAGCCAGAC+TGG 0.536990 5_3:+17136056 None:intergenic
TATTTCTGAATGTGACAAGT+TGG 0.538780 5_3:-17133103 Msa0802610:CDS
GCCTCGCAAACTATACAAGC+TGG 0.538871 5_3:-17134279 Msa0802610:CDS
CAAATTTGGATTGATGATGT+GGG 0.541844 5_3:-17135612 Msa0802610:CDS
AGTATCGGAGAAGACGGAGG+TGG 0.547669 5_3:-17135823 Msa0802610:CDS
ATGTCTTGATTCCCATGTCA+TGG 0.547762 5_3:+17134516 None:intergenic
TACAGCGTGGGTGACCTTAG+CGG 0.548282 5_3:-17134212 Msa0802610:CDS
TCTCAGATTGTCCTAACCTC+AGG 0.548532 5_3:-17133713 Msa0802610:CDS
ACTTGTCATTAAAGATTGGA+AGG 0.551634 5_3:-17133403 Msa0802610:CDS
TTGGAAGTTCATCAAGGTGT+GGG 0.552641 5_3:+17133871 None:intergenic
AGTTTACTTTCCATCCTTGG+AGG 0.552984 5_3:-17133745 Msa0802610:CDS
TGATGAAGAGCTAGTTCTCA+CGG 0.553439 5_3:-17133577 Msa0802610:CDS
CTTCCCATTTAATACTTGAG+AGG 0.555515 5_3:+17133295 None:intergenic
TGAGGTTTGGAAGTTCATCA+AGG 0.556164 5_3:+17133865 None:intergenic
AAGTATTTGATCCAATACTC+TGG 0.557850 5_3:+17133441 None:intergenic
CTCATCCTCGAAGATGAGAC+GGG 0.559868 5_3:+17135659 None:intergenic
AAAATTATGATGGATTGGAA+TGG 0.560417 5_3:-17135166 Msa0802610:CDS
GATGATGATAATTATCTCAC+AGG 0.562644 5_3:-17134119 Msa0802610:CDS
TCTTGAGCTAGATGGATGCT+TGG 0.563577 5_3:-17134315 Msa0802610:CDS
AGATTCCACTTCATTAAGCA+CGG 0.565582 5_3:+17135258 None:intergenic
CCCTTATGGTTAAAGAACGC+AGG 0.567696 5_3:+17133262 None:intergenic
GATCTGATACGAATCGTGCT+AGG 0.568993 5_3:+17134786 None:intergenic
GAGGCGACTATTATGATGAC+TGG 0.572702 5_3:+17135944 None:intergenic
GCGGTCAAGAACCACGTCCC+AGG 0.573482 5_3:-17136092 Msa0802610:CDS
ATGAGGCGTGGCATAATCCT+CGG 0.573713 5_3:+17135992 None:intergenic
AATTTGTGGCCAATCATCAC+CGG 0.573804 5_3:+17132987 None:intergenic
TTCAACACAAATCCTGGACC+TGG 0.574575 5_3:-17135738 Msa0802610:CDS
GAGATCCAGCATTCGGAGAG+TGG 0.580697 5_3:+17134538 None:intergenic
TTTAGCTTGGATGTTTCACA+TGG 0.581515 5_3:-17134692 Msa0802610:CDS
GATTCCACTTCATTAAGCAC+GGG 0.581791 5_3:+17135259 None:intergenic
TTCTTTAGGCGGACTACTGG+TGG 0.584540 5_3:+17135845 None:intergenic
TGAGCCTTGCAAGTCCGCTA+AGG 0.584673 5_3:+17134198 None:intergenic
TGTCGTTAAAGATCTGACTA+AGG 0.585465 5_3:-17135098 Msa0802610:CDS
GAAATTGCTCTCAGTTCAGA+GGG 0.585740 5_3:+17133993 None:intergenic
TTGAAACAATACGTCATGGC+AGG 0.586971 5_3:-17133533 Msa0802610:CDS
GATGAAGAGCTAGTTCTCAC+GGG 0.588263 5_3:-17133576 Msa0802610:CDS
TTTGGAAGTTCATCAAGGTG+TGG 0.588280 5_3:+17133870 None:intergenic
TGATCGACTGTCCTCGATGT+TGG 0.591251 5_3:+17133467 None:intergenic
GACGGAGGTGGAGACAGAGT+TGG 0.591910 5_3:-17135811 Msa0802610:CDS
CTCTCAAGTATTAAATGGGA+AGG 0.592425 5_3:-17133294 Msa0802610:CDS
ACTAGCTCTTCATCAAGACC+AGG 0.592526 5_3:+17133585 None:intergenic
AATGTTACGGTGGATCCAGA+AGG 0.594146 5_3:-17134755 Msa0802610:CDS
GTCTCAATGTTATCTACTCG+AGG 0.594774 5_3:-17134378 Msa0802610:CDS
TAGTCCGCCTAAAGAAGTAT+CGG 0.595143 5_3:-17135838 Msa0802610:CDS
ATGTTACGGTGGATCCAGAA+GGG 0.599741 5_3:-17134754 Msa0802610:CDS
TCCAGCTTGTATAGTTTGCG+AGG 0.599868 5_3:+17134278 None:intergenic
GCTCATCCTCGAAGATGAGA+CGG 0.600722 5_3:+17135658 None:intergenic
GTTGCTTTGTAAACACCCAA+TGG 0.601308 5_3:+17133216 None:intergenic
ATTGTGAGTTCCTCCAAGGA+TGG 0.601538 5_3:+17133735 None:intergenic
GTTAGTGAGGGGTACAGCGT+GGG 0.602673 5_3:-17134224 Msa0802610:CDS
GATCTAAAGTCTCTTCCCAA+AGG 0.603953 5_3:-17133381 Msa0802610:CDS
GATGCAAACGTTGCTTCCGA+AGG 0.603963 5_3:-17134612 Msa0802610:CDS
AAAGAGAGACCACTTCTATG+AGG 0.604241 5_3:+17135975 None:intergenic
GTGACCTTAGCGGACTTGCA+AGG 0.609906 5_3:-17134202 Msa0802610:CDS
TAAAGAAGTATCGGAGAAGA+CGG 0.610552 5_3:-17135829 Msa0802610:CDS
AATGCTGGATCTCCATGACA+TGG 0.611290 5_3:-17134528 Msa0802610:CDS
GACATTGCCAAAATCTATTG+GGG 0.613168 5_3:-17134498 Msa0802610:CDS
GATACTACAACGAACTTCCG+AGG 0.615407 5_3:-17135048 Msa0802610:CDS
AATGTTAAGACTTTGGAGTG+AGG 0.617364 5_3:+17133344 None:intergenic
CTGACATCTTGGCAACAACA+AGG 0.618756 5_3:+17133017 None:intergenic
ATAGTTACTGACGAGGTGCT+TGG 0.619116 5_3:-17135501 Msa0802610:CDS
GTCCTAACCTCAGGAAATGG+TGG 0.620127 5_3:-17133704 Msa0802610:CDS
TCAAAAGGCAAAGAAGCTAA+GGG 0.620319 5_3:-17134651 Msa0802610:CDS
TCAAATTGTCCAGTATAACA+AGG 0.621576 5_3:+17135532 None:intergenic
TTCTCCGATACTTCTTTAGG+CGG 0.622098 5_3:+17135834 None:intergenic
GTGGCATGCAAGTTAGGTCA+GGG 0.622596 5_3:+17133613 None:intergenic
CAAGATGTGAAATTTCCAAG+TGG 0.623582 5_3:+17134162 None:intergenic
TGAGATTGTGAGTTCCTCCA+AGG 0.624958 5_3:+17133731 None:intergenic
TGAGAGCAATTTCTATTGTG+GGG 0.625554 5_3:-17133983 Msa0802610:CDS
CGTTAAAGATCTGACTAAGG+AGG 0.631875 5_3:-17135095 Msa0802610:CDS
CGAGGATGACTATGATGAGG+AGG 0.632296 5_3:-17134057 Msa0802610:CDS
TGGACCTGGAAAAGTTTCTG+TGG 0.635973 5_3:-17135724 Msa0802610:CDS
CCATTGATGAAATCCTTGCA+AGG 0.637486 5_3:-17136205 Msa0802610:CDS
TATGCCACGCCTCATAGAAG+TGG 0.638991 5_3:-17135984 Msa0802610:CDS
CTACTTGAAACAATACGTCA+TGG 0.639906 5_3:-17133537 Msa0802610:CDS
GAAGGGGAAAATGTTCGTGA+AGG 0.645580 5_3:-17134737 Msa0802610:CDS
ATTGCTCTCAGTTCAGAGGG+AGG 0.647126 5_3:+17133996 None:intergenic
ACATCGATCAAATGATCTCG+AGG 0.648619 5_3:+17134989 None:intergenic
ATGCTGGATCTCCATGACAT+GGG 0.651730 5_3:-17134527 Msa0802610:CDS
AGGTTTCGCAGCCAGACTGG+AGG 0.655000 5_3:+17136059 None:intergenic
GGTTAGTGAGGGGTACAGCG+TGG 0.660923 5_3:-17134225 Msa0802610:CDS
GAGACCACTTCTATGAGGCG+TGG 0.669006 5_3:+17135980 None:intergenic
GATTCCTGCGAATCCAACAA+TGG 0.669255 5_3:+17135698 None:intergenic
TGTTACGGTGGATCCAGAAG+GGG 0.669734 5_3:-17134753 Msa0802610:CDS
CCACGAGGATGACTATGATG+AGG 0.670399 5_3:-17134060 Msa0802610:CDS
TAGATGACTTGTGTGCAGCA+CGG 0.671274 5_3:+17135577 None:intergenic
TATTTGATCCAATACTCTGG+TGG 0.673052 5_3:+17133444 None:intergenic
TGGGACGTGGTTCTTGACCG+CGG 0.678147 5_3:+17136094 None:intergenic
TTAAGCACGGGAAAGACATG+TGG 0.694240 5_3:+17135271 None:intergenic
AGAAGTATCGGAGAAGACGG+AGG 0.700284 5_3:-17135826 Msa0802610:CDS
AACTGAGATAGTTACTGACG+AGG 0.703945 5_3:-17135508 Msa0802610:CDS
TCAAATGGAGAATGTTACGG+TGG 0.704464 5_3:-17134765 Msa0802610:CDS
GCAAGGCTCAACAACTTACG+AGG 0.705490 5_3:-17134185 Msa0802610:CDS
GACATGGAAGAAGACGAATG+TGG 0.712607 5_3:-17134848 Msa0802610:CDS
AATGAAAATTGCCAACATCG+AGG 0.719995 5_3:-17133478 Msa0802610:CDS
TTTGGTGGAGGAACTCTCCG+AGG 0.722909 5_3:-17136009 Msa0802610:intron
CCTCATCATAGTCATCCTCG+TGG 0.737107 5_3:+17134060 None:intergenic
TACGTTAAGATGGAACCACG+AGG 0.812885 5_3:-17134075 Msa0802610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATTTTTAAGTTGA+CGG + chr5_3:17133255-17133274 None:intergenic 10.0%
!! AAAAATAAAAAATGTCATAG+AGG - chr5_3:17133262-17133281 Msa0802610:CDS 15.0%
!! AAAATAAAAAATGTCATAGA+GGG - chr5_3:17133263-17133282 Msa0802610:CDS 15.0%
!!! TTTTTTATATGCTTAATTTG+TGG + chr5_3:17136199-17136218 None:intergenic 15.0%
!! TAAGCATATAAAAAATAAAC+AGG - chr5_3:17136204-17136223 Msa0802610:CDS 15.0%
!! AAGATATTAATGACATCTAA+TGG - chr5_3:17133701-17133720 Msa0802610:CDS 20.0%
!! AATTGAACAGAAAATTATGA+TGG - chr5_3:17133993-17134012 Msa0802610:CDS 20.0%
!! TTTGAATATTTGACTATAAG+TGG + chr5_3:17134601-17134620 None:intergenic 20.0%
!!! AATATACATGAAGTTTTGAA+AGG + chr5_3:17135532-17135551 None:intergenic 20.0%
!!! TTTTTATGAGAGGAGTATTA+AGG + chr5_3:17133049-17133068 None:intergenic 25.0%
!! TCATTGTTTTCAAAAATTCG+TGG - chr5_3:17133937-17133956 Msa0802610:CDS 25.0%
! TATTTCAAAGTTTGATGTGA+AGG - chr5_3:17133966-17133985 Msa0802610:CDS 25.0%
!!! AACAGAAAATTATGATGGAT+TGG - chr5_3:17133998-17134017 Msa0802610:CDS 25.0%
!!! AAAATTATGATGGATTGGAA+TGG - chr5_3:17134003-17134022 Msa0802610:CDS 25.0%
! TAAAATCAAAAGAAGCTCTT+AGG + chr5_3:17134461-17134480 None:intergenic 25.0%
!! TAACTTGTCTACAGTATTAA+GGG + chr5_3:17134727-17134746 None:intergenic 25.0%
! ATTAGTTCATCAATGTTCTT+GGG + chr5_3:17134822-17134841 None:intergenic 25.0%
! AATTAGTTCATCAATGTTCT+TGG + chr5_3:17134823-17134842 None:intergenic 25.0%
! TATATTGCTGATGAAAAAGA+TGG - chr5_3:17135362-17135381 Msa0802610:intron 25.0%
! TAAAACCGAAAAAGATTTAC+CGG - chr5_3:17135496-17135515 Msa0802610:CDS 25.0%
!! AAAAACCGGTAAATCTTTTT+CGG + chr5_3:17135504-17135523 None:intergenic 25.0%
! AGAAACTTGTCATTAAAGAT+TGG - chr5_3:17135762-17135781 Msa0802610:CDS 25.0%
!! AGTTTTCAATGTTAAGACTT+TGG + chr5_3:17135835-17135854 None:intergenic 25.0%
!!! TCCTAAAGCATTGAAAAATT+TGG - chr5_3:17136096-17136115 Msa0802610:CDS 25.0%
!!! TCCAAATTTTTCAATGCTTT+AGG + chr5_3:17136100-17136119 None:intergenic 25.0%
!!! TAAAGCATTGAAAAATTTGG+AGG - chr5_3:17136099-17136118 Msa0802610:CDS 25.0%
TTTCATCAATGGTTTCTTTC+AGG + chr5_3:17132956-17132975 None:intergenic 30.0%
TCTCATAAAAATTCAAACCG+CGG - chr5_3:17133058-17133077 Msa0802610:CDS 30.0%
TGTCAATGATCTGAATGATT+TGG - chr5_3:17133142-17133161 Msa0802610:CDS 30.0%
! TTTTCTCCCAATTATAGATG+GGG + chr5_3:17133384-17133403 None:intergenic 30.0%
! CTTTTCTCCCAATTATAGAT+GGG + chr5_3:17133385-17133404 None:intergenic 30.0%
! TCTTTTCTCCCAATTATAGA+TGG + chr5_3:17133386-17133405 None:intergenic 30.0%
GAGCAAATCAAAGATAACTA+TGG - chr5_3:17133530-17133549 Msa0802610:CDS 30.0%
! ATAACTATGGCTTGCAAATT+TGG - chr5_3:17133543-17133562 Msa0802610:CDS 30.0%
!! CAAATTTGGATTGATGATGT+GGG - chr5_3:17133557-17133576 Msa0802610:CDS 30.0%
TCAAATTGTCCAGTATAACA+AGG + chr5_3:17133640-17133659 None:intergenic 30.0%
TTGCCAACAATATTACTGTT+AGG - chr5_3:17133762-17133781 Msa0802610:CDS 30.0%
CAACCTAACAGTAATATTGT+TGG + chr5_3:17133768-17133787 None:intergenic 30.0%
AACGTGGTAAAAATAGTATC+TGG + chr5_3:17133874-17133893 None:intergenic 30.0%
!! GGAGTTTCTAGAATATCTTA+AGG - chr5_3:17134095-17134114 Msa0802610:CDS 30.0%
!! AAACACAACTTTTGATTCCT+CGG + chr5_3:17134141-17134160 None:intergenic 30.0%
AGTATTTCAACGACTTTGTT+GGG - chr5_3:17134283-17134302 Msa0802610:CDS 30.0%
! TCTTCCATGTCTTTGAAAAT+AGG + chr5_3:17134312-17134331 None:intergenic 30.0%
AGATCAAATGGAGAATGTTA+CGG - chr5_3:17134401-17134420 Msa0802610:CDS 30.0%
!!! AGCTTCTTTTGATTTTAGCT+TGG - chr5_3:17134464-17134483 Msa0802610:CDS 30.0%
!!! TTTGCCTTTTGAAACAAAGA+AGG + chr5_3:17134510-17134529 None:intergenic 30.0%
AAGACATTGCCAAAATCTAT+TGG - chr5_3:17134669-17134688 Msa0802610:CDS 30.0%
AGACATTGCCAAAATCTATT+GGG - chr5_3:17134670-17134689 Msa0802610:CDS 30.0%
! TTCATATCCCCAATAGATTT+TGG + chr5_3:17134681-17134700 None:intergenic 30.0%
TTGGGGATATGAATAATTTG+AGG - chr5_3:17134688-17134707 Msa0802610:CDS 30.0%
! GTAACTTGTCTACAGTATTA+AGG + chr5_3:17134728-17134747 None:intergenic 30.0%
!! GTTAGCTTGATAATGGAATT+TGG + chr5_3:17134750-17134769 None:intergenic 30.0%
!! CAAATTGGTTAGCTTGATAA+TGG + chr5_3:17134757-17134776 None:intergenic 30.0%
CAATTTCAACGTTTGCAAAT+TGG + chr5_3:17134772-17134791 None:intergenic 30.0%
GATGATGATAATTATCTCAC+AGG - chr5_3:17135050-17135069 Msa0802610:CDS 30.0%
ACAGGTAAAAATCAACTTCA+GGG - chr5_3:17135068-17135087 Msa0802610:CDS 30.0%
TTAGAAGTTCGAGAAATTTG+AGG + chr5_3:17135325-17135344 None:intergenic 30.0%
TCAAATTTCTCGAACTTCTA+AGG - chr5_3:17135324-17135343 Msa0802610:intron 30.0%
AAGTATTTGATCCAATACTC+TGG + chr5_3:17135731-17135750 None:intergenic 30.0%
ACTTGTCATTAAAGATTGGA+AGG - chr5_3:17135766-17135785 Msa0802610:CDS 30.0%
TTCACCTCTCAAGTATTAAA+TGG - chr5_3:17135870-17135889 Msa0802610:CDS 30.0%
TCACCTCTCAAGTATTAAAT+GGG - chr5_3:17135871-17135890 Msa0802610:CDS 30.0%
!!! CAGTTTTGAATTTTCCCTTA+TGG + chr5_3:17135924-17135943 None:intergenic 30.0%
! TATTTCTGAATGTGACAAGT+TGG - chr5_3:17136066-17136085 Msa0802610:CDS 30.0%
! TCTGCATACTTTGATCATTT+TGG - chr5_3:17136123-17136142 Msa0802610:CDS 30.0%
!! GAGTTTTTCTTTTCAAGGGA+AGG + chr5_3:17132993-17133012 None:intergenic 35.0%
! GCGGTTTGAATTTTTATGAG+AGG + chr5_3:17133059-17133078 None:intergenic 35.0%
! CAATGATCTGAATGATTTGG+TGG - chr5_3:17133145-17133164 Msa0802610:CDS 35.0%
!!! TTTTTAAGTTGACGGCTTTG+AGG + chr5_3:17133247-17133266 None:intergenic 35.0%
GCAGTTTAGTTGAAACTTCT+TGG + chr5_3:17133292-17133311 None:intergenic 35.0%
!! TAAAGAAGTATCGGAGAAGA+CGG - chr5_3:17133340-17133359 Msa0802610:CDS 35.0%
ATCTTGTTCAACACAAATCC+TGG - chr5_3:17133425-17133444 Msa0802610:CDS 35.0%
!! GCAAATTTGGATTGATGATG+TGG - chr5_3:17133556-17133575 Msa0802610:CDS 35.0%
! AAAAGGCAACCTTGTTATAC+TGG - chr5_3:17133628-17133647 Msa0802610:CDS 35.0%
!!! GTGGTGTTTTTTGGAAGTTA+AGG + chr5_3:17133801-17133820 None:intergenic 35.0%
!! TGTTGTTTCAGTTTCATGCA+TGG + chr5_3:17133851-17133870 None:intergenic 35.0%
AGATTCCACTTCATTAAGCA+CGG + chr5_3:17133914-17133933 None:intergenic 35.0%
TGCTTAATGAAGTGGAATCT+TGG - chr5_3:17133914-17133933 Msa0802610:CDS 35.0%
TTCAAAGTTTGATGTGAAGG+AGG - chr5_3:17133969-17133988 Msa0802610:CDS 35.0%
GCTGTGAATGATATCAAGAA+AGG + chr5_3:17134033-17134052 None:intergenic 35.0%
TGTCGTTAAAGATCTGACTA+AGG - chr5_3:17134071-17134090 Msa0802610:CDS 35.0%
TCGAGAGATTAATTCATCTC+TGG - chr5_3:17134202-17134221 Msa0802610:CDS 35.0%
GAGTATTTCAACGACTTTGT+TGG - chr5_3:17134282-17134301 Msa0802610:CDS 35.0%
! GATGCCTATTTTCAAAGACA+TGG - chr5_3:17134305-17134324 Msa0802610:CDS 35.0%
ACGATTCGTATCAGATCAAA+TGG - chr5_3:17134389-17134408 Msa0802610:CDS 35.0%
!! TTTAGCTTGGATGTTTCACA+TGG - chr5_3:17134477-17134496 Msa0802610:CDS 35.0%
! TCCACCTTCTTTGTTTCAAA+AGG - chr5_3:17134503-17134522 Msa0802610:CDS 35.0%
TTCAAAAGGCAAAGAAGCTA+AGG - chr5_3:17134517-17134536 Msa0802610:CDS 35.0%
TCAAAAGGCAAAGAAGCTAA+GGG - chr5_3:17134518-17134537 Msa0802610:CDS 35.0%
TTGCATCTTCCAAAAGAGAA+TGG + chr5_3:17134544-17134563 None:intergenic 35.0%
GACATTGCCAAAATCTATTG+GGG - chr5_3:17134671-17134690 Msa0802610:CDS 35.0%
CAAGATGTGAAATTTCCAAG+TGG + chr5_3:17135010-17135029 None:intergenic 35.0%
CACAGGTAAAAATCAACTTC+AGG - chr5_3:17135067-17135086 Msa0802610:CDS 35.0%
ACTGAGAGCAATTTCTATTG+TGG - chr5_3:17135184-17135203 Msa0802610:CDS 35.0%
CTGAGAGCAATTTCTATTGT+GGG - chr5_3:17135185-17135204 Msa0802610:CDS 35.0%
TGAGAGCAATTTCTATTGTG+GGG - chr5_3:17135186-17135205 Msa0802610:CDS 35.0%
ATTTCTATTGTGGGGTACAT+AGG - chr5_3:17135194-17135213 Msa0802610:CDS 35.0%
TAGGTAAAACACTTCCGTAT+TGG - chr5_3:17135213-17135232 Msa0802610:CDS 35.0%
TCCATGTAAGGAAACCAATA+CGG + chr5_3:17135230-17135249 None:intergenic 35.0%
TTAACAAGCGATTCCATGTA+AGG + chr5_3:17135242-17135261 None:intergenic 35.0%
! AGTTCGAGAAATTTGAGGTT+TGG + chr5_3:17135320-17135339 None:intergenic 35.0%
!! ATTTCTCGAACTTCTAAGGT+TGG - chr5_3:17135328-17135347 Msa0802610:intron 35.0%
TTTGAAAGGCAAGCAAAAAC+CGG + chr5_3:17135518-17135537 None:intergenic 35.0%
! TGACGTATTGTTTCAAGTAG+TGG + chr5_3:17135632-17135651 None:intergenic 35.0%
CTACTTGAAACAATACGTCA+TGG - chr5_3:17135632-17135651 Msa0802610:CDS 35.0%
AATGAAAATTGCCAACATCG+AGG - chr5_3:17135691-17135710 Msa0802610:CDS 35.0%
TATTTGATCCAATACTCTGG+TGG + chr5_3:17135728-17135747 None:intergenic 35.0%
!! AATGTTAAGACTTTGGAGTG+AGG + chr5_3:17135828-17135847 None:intergenic 35.0%
CTTCCCATTTAATACTTGAG+AGG + chr5_3:17135877-17135896 None:intergenic 35.0%
CTCTCAAGTATTAAATGGGA+AGG - chr5_3:17135875-17135894 Msa0802610:CDS 35.0%
AAAACTGAAGACTCTTCCAT+TGG - chr5_3:17135937-17135956 Msa0802610:CDS 35.0%
AAACTGAAGACTCTTCCATT+GGG - chr5_3:17135938-17135957 Msa0802610:CDS 35.0%
AGTTATGAAGCTGAAGATCT+TGG + chr5_3:17135985-17136004 None:intergenic 35.0%
TCAGACAAAGAAGTCATTTG+AGG + chr5_3:17136010-17136029 None:intergenic 35.0%
! AAGTGATTTGAGGTTGTCTA+TGG + chr5_3:17136035-17136054 None:intergenic 35.0%
CCAATTTCTCAAGTGATTTG+AGG + chr5_3:17136045-17136064 None:intergenic 35.0%
CCTCAAATCACTTGAGAAAT+TGG - chr5_3:17136042-17136061 Msa0802610:CDS 35.0%
CCTTGCAAGGATTTCATCAA+TGG + chr5_3:17132967-17132986 None:intergenic 40.0%
CCATTGATGAAATCCTTGCA+AGG - chr5_3:17132964-17132983 Msa0802610:CDS 40.0%
! GCGGGAGTTTTTCTTTTCAA+GGG + chr5_3:17132997-17133016 None:intergenic 40.0%
! TGCGGGAGTTTTTCTTTTCA+AGG + chr5_3:17132998-17133017 None:intergenic 40.0%
GAAAAGAAAAACTCCCGCAT+CGG - chr5_3:17132999-17133018 Msa0802610:CDS 40.0%
AAAAGAAAAACTCCCGCATC+GGG - chr5_3:17133000-17133019 Msa0802610:CDS 40.0%
GATCATTGACAGCAGTCTTA+AGG + chr5_3:17133133-17133152 None:intergenic 40.0%
!! TGATCTGAATGATTTGGTGG+AGG - chr5_3:17133148-17133167 Msa0802610:CDS 40.0%
AAAGAGAGACCACTTCTATG+AGG + chr5_3:17133197-17133216 None:intergenic 40.0%
! TAGTCCGCCTAAAGAAGTAT+CGG - chr5_3:17133331-17133350 Msa0802610:CDS 40.0%
TTCTCCGATACTTCTTTAGG+CGG + chr5_3:17133338-17133357 None:intergenic 40.0%
GTCTTCTCCGATACTTCTTT+AGG + chr5_3:17133341-17133360 None:intergenic 40.0%
AGTTGGCCCCATCTATAATT+GGG - chr5_3:17133375-17133394 Msa0802610:CDS 40.0%
! GTAACCACAGAAACTTTTCC+AGG + chr5_3:17133452-17133471 None:intergenic 40.0%
GTTTCTGTGGTTACCATTGT+TGG - chr5_3:17133458-17133477 Msa0802610:CDS 40.0%
ATTGTTGGATTCGCAGGAAT+CGG - chr5_3:17133473-17133492 Msa0802610:CDS 40.0%
AAGTCATCTACTTCCGTTGA+AGG - chr5_3:17133605-17133624 Msa0802610:CDS 40.0%
TCTACTTCCGTTGAAGGAAA+AGG - chr5_3:17133611-17133630 Msa0802610:CDS 40.0%
! AAGGTTGCCTTTTCCTTCAA+CGG + chr5_3:17133621-17133640 None:intergenic 40.0%
AACTGAGATAGTTACTGACG+AGG - chr5_3:17133661-17133680 Msa0802610:CDS 40.0%
! GGCAAGAATTTTACTACGTG+TGG + chr5_3:17133747-17133766 None:intergenic 40.0%
GAAGAAGAAGAAGCAGACAA+GGG + chr5_3:17133829-17133848 None:intergenic 40.0%
GATTCCACTTCATTAAGCAC+GGG + chr5_3:17133913-17133932 None:intergenic 40.0%
CGTTAAAGATCTGACTAAGG+AGG - chr5_3:17134074-17134093 Msa0802610:CDS 40.0%
ACATCGATCAAATGATCTCG+AGG + chr5_3:17134183-17134202 None:intergenic 40.0%
TCAAATGGAGAATGTTACGG+TGG - chr5_3:17134404-17134423 Msa0802610:CDS 40.0%
!!! GCCTTTTGAAACAAAGAAGG+TGG + chr5_3:17134507-17134526 None:intergenic 40.0%
ATGTCTTGATTCCCATGTCA+TGG + chr5_3:17134656-17134675 None:intergenic 40.0%
GTCTCAATGTTATCTACTCG+AGG - chr5_3:17134791-17134810 Msa0802610:CDS 40.0%
! TTGAAGCATCTTGAGCTAGA+TGG - chr5_3:17134846-17134865 Msa0802610:CDS 40.0%
ACAAACGCTTTCTCTCTTTG+TGG - chr5_3:17134923-17134942 Msa0802610:CDS 40.0%
TTCTCTCTTTGTGGTTAGTG+AGG - chr5_3:17134932-17134951 Msa0802610:CDS 40.0%
TCTCTCTTTGTGGTTAGTGA+GGG - chr5_3:17134933-17134952 Msa0802610:CDS 40.0%
ACATCTTGAAAGATCCAGCT+TGG - chr5_3:17135022-17135041 Msa0802610:CDS 40.0%
TTCAGGGTCTTACGTTAAGA+TGG - chr5_3:17135084-17135103 Msa0802610:CDS 40.0%
GAAATTGCTCTCAGTTCAGA+GGG + chr5_3:17135179-17135198 None:intergenic 40.0%
AGAAATTGCTCTCAGTTCAG+AGG + chr5_3:17135180-17135199 None:intergenic 40.0%
!! TCCGTATTGGTTTCCTTACA+TGG - chr5_3:17135226-17135245 Msa0802610:CDS 40.0%
TTGGAAGTTCATCAAGGTGT+GGG + chr5_3:17135301-17135320 None:intergenic 40.0%
TTTGGAAGTTCATCAAGGTG+TGG + chr5_3:17135302-17135321 None:intergenic 40.0%
TGAGGTTTGGAAGTTCATCA+AGG + chr5_3:17135307-17135326 None:intergenic 40.0%
TGCAGTTTACTTTCCATCCT+TGG - chr5_3:17135421-17135440 Msa0802610:CDS 40.0%
AGTTTACTTTCCATCCTTGG+AGG - chr5_3:17135424-17135443 Msa0802610:CDS 40.0%
ATTGTCCTAACCTCAGGAAA+TGG - chr5_3:17135462-17135481 Msa0802610:CDS 40.0%
GAAAAAGTGGCATGCAAGTT+AGG + chr5_3:17135565-17135584 None:intergenic 40.0%
TCATCAAGACCAGGAAAAAG+TGG + chr5_3:17135578-17135597 None:intergenic 40.0%
! TGATGAAGAGCTAGTTCTCA+CGG - chr5_3:17135592-17135611 Msa0802610:CDS 40.0%
TTGAAACAATACGTCATGGC+AGG - chr5_3:17135636-17135655 Msa0802610:CDS 40.0%
! GATCTAAAGTCTCTTCCCAA+AGG - chr5_3:17135788-17135807 Msa0802610:CDS 40.0%
GTCAGATGATCGAAACCTTT+GGG + chr5_3:17135806-17135825 None:intergenic 40.0%
ACCTGCGTTCTTTAACCATA+AGG - chr5_3:17135906-17135925 Msa0802610:CDS 40.0%
CCTGCGTTCTTTAACCATAA+GGG - chr5_3:17135907-17135926 Msa0802610:CDS 40.0%
! GTTGCTTTGTAAACACCCAA+TGG + chr5_3:17135956-17135975 None:intergenic 40.0%
AATTTGTGGCCAATCATCAC+CGG + chr5_3:17136185-17136204 None:intergenic 40.0%
GAGGCGACTATTATGATGAC+TGG + chr5_3:17133228-17133247 None:intergenic 45.0%
! CTACTGGTGGTAGTGTTCTT+GGG + chr5_3:17133314-17133333 None:intergenic 45.0%
! ACTACTGGTGGTAGTGTTCT+TGG + chr5_3:17133315-17133334 None:intergenic 45.0%
!! TACTTCTTTAGGCGGACTAC+TGG + chr5_3:17133330-17133349 None:intergenic 45.0%
GAGTTGGCCCCATCTATAAT+TGG - chr5_3:17133374-17133393 Msa0802610:CDS 45.0%
TTCAACACAAATCCTGGACC+TGG - chr5_3:17133431-17133450 Msa0802610:CDS 45.0%
! ACAGAAACTTTTCCAGGTCC+AGG + chr5_3:17133446-17133465 None:intergenic 45.0%
TGGACCTGGAAAAGTTTCTG+TGG - chr5_3:17133445-17133464 Msa0802610:CDS 45.0%
GTTACCATTGTTGGATTCGC+AGG - chr5_3:17133467-17133486 Msa0802610:CDS 45.0%
GATTCCTGCGAATCCAACAA+TGG + chr5_3:17133474-17133493 None:intergenic 45.0%
TTGTTGGATTCGCAGGAATC+GGG - chr5_3:17133474-17133493 Msa0802610:CDS 45.0%
! TAGATGACTTGTGTGCAGCA+CGG + chr5_3:17133595-17133614 None:intergenic 45.0%
! ATAGTTACTGACGAGGTGCT+TGG - chr5_3:17133668-17133687 Msa0802610:CDS 45.0%
!!! AGGGTTGTGGTGGTGTTTTT+TGG + chr5_3:17133810-17133829 None:intergenic 45.0%
GGAAGAAGAAGAAGCAGACA+AGG + chr5_3:17133830-17133849 None:intergenic 45.0%
AAAGACATGTGGCTGAAACG+TGG + chr5_3:17133890-17133909 None:intergenic 45.0%
TTAAGCACGGGAAAGACATG+TGG + chr5_3:17133901-17133920 None:intergenic 45.0%
CTTTCCCGTGCTTAATGAAG+TGG - chr5_3:17133906-17133925 Msa0802610:CDS 45.0%
GATACTACAACGAACTTCCG+AGG - chr5_3:17134121-17134140 Msa0802610:CDS 45.0%
ATTCATCTCTGGACAGCAGA+AGG - chr5_3:17134213-17134232 Msa0802610:CDS 45.0%
! CTCGCGTAAGTTTTCTTCTG+TGG + chr5_3:17134265-17134284 None:intergenic 45.0%
GACATGGAAGAAGACGAATG+TGG - chr5_3:17134321-17134340 Msa0802610:CDS 45.0%
GATCTGATACGAATCGTGCT+AGG + chr5_3:17134386-17134405 None:intergenic 45.0%
AATGTTACGGTGGATCCAGA+AGG - chr5_3:17134414-17134433 Msa0802610:CDS 45.0%
ATGTTACGGTGGATCCAGAA+GGG - chr5_3:17134415-17134434 Msa0802610:CDS 45.0%
! TCACGAACATTTTCCCCTTC+TGG + chr5_3:17134432-17134451 None:intergenic 45.0%
GAAGGGGAAAATGTTCGTGA+AGG - chr5_3:17134432-17134451 Msa0802610:CDS 45.0%
! AGCTAAGGGCCATTCTCTTT+TGG - chr5_3:17134532-17134551 Msa0802610:CDS 45.0%
TGTCATGGAGATCCAGCATT+CGG + chr5_3:17134641-17134660 None:intergenic 45.0%
AATGCTGGATCTCCATGACA+TGG - chr5_3:17134641-17134660 Msa0802610:CDS 45.0%
ATGCTGGATCTCCATGACAT+GGG - chr5_3:17134642-17134661 Msa0802610:CDS 45.0%
TCTTGAGCTAGATGGATGCT+TGG - chr5_3:17134854-17134873 Msa0802610:CDS 45.0%
! TCCAGCTTGTATAGTTTGCG+AGG + chr5_3:17134894-17134913 None:intergenic 45.0%
CTCTCTTTGTGGTTAGTGAG+GGG - chr5_3:17134934-17134953 Msa0802610:CDS 45.0%
TACGTTAAGATGGAACCACG+AGG - chr5_3:17135094-17135113 Msa0802610:CDS 45.0%
ATTGTGAGTTCCTCCAAGGA+TGG + chr5_3:17135437-17135456 None:intergenic 45.0%
TGAGATTGTGAGTTCCTCCA+AGG + chr5_3:17135441-17135460 None:intergenic 45.0%
TCTCAGATTGTCCTAACCTC+AGG - chr5_3:17135456-17135475 Msa0802610:CDS 45.0%
TTCCACCATTTCCTGAGGTT+AGG + chr5_3:17135470-17135489 None:intergenic 45.0%
! GCATTTTCCACCATTTCCTG+AGG + chr5_3:17135475-17135494 None:intergenic 45.0%
!!! ACTTGCATGCCACTTTTTCC+TGG - chr5_3:17135566-17135585 Msa0802610:CDS 45.0%
! ACTAGCTCTTCATCAAGACC+AGG + chr5_3:17135587-17135606 None:intergenic 45.0%
! GATGAAGAGCTAGTTCTCAC+GGG - chr5_3:17135593-17135612 Msa0802610:CDS 45.0%
AATACGTCATGGCAGGAGAA+AGG - chr5_3:17135643-17135662 Msa0802610:CDS 45.0%
ATACGTCATGGCAGGAGAAA+GGG - chr5_3:17135644-17135663 Msa0802610:CDS 45.0%
GGTCAGATGATCGAAACCTT+TGG + chr5_3:17135807-17135826 None:intergenic 45.0%
CCCTTATGGTTAAAGAACGC+AGG + chr5_3:17135910-17135929 None:intergenic 45.0%
CTGACATCTTGGCAACAACA+AGG + chr5_3:17136155-17136174 None:intergenic 45.0%
!! CAAGGGAAGGTATCCTTGCA+AGG + chr5_3:17132980-17132999 None:intergenic 50.0%
! CTGGAGGAACCTTTTGACCT+GGG + chr5_3:17133097-17133116 None:intergenic 50.0%
! ACTGGAGGAACCTTTTGACC+TGG + chr5_3:17133098-17133117 None:intergenic 50.0%
GTCAAAAGGTTCCTCCAGTC+TGG - chr5_3:17133099-17133118 Msa0802610:CDS 50.0%
TTAAGGTTTCGCAGCCAGAC+TGG + chr5_3:17133116-17133135 None:intergenic 50.0%
ATGAGGCGTGGCATAATCCT+CGG + chr5_3:17133180-17133199 None:intergenic 50.0%
TATGCCACGCCTCATAGAAG+TGG - chr5_3:17133185-17133204 Msa0802610:CDS 50.0%
!! TTCTTTAGGCGGACTACTGG+TGG + chr5_3:17133327-17133346 None:intergenic 50.0%
!! AGAAGTATCGGAGAAGACGG+AGG - chr5_3:17133343-17133362 Msa0802610:CDS 50.0%
CTCATCCTCGAAGATGAGAC+GGG + chr5_3:17133513-17133532 None:intergenic 50.0%
GCTCATCCTCGAAGATGAGA+CGG + chr5_3:17133514-17133533 None:intergenic 50.0%
! TGACGAGGTGCTTGGTGATT+TGG - chr5_3:17133676-17133695 Msa0802610:CDS 50.0%
GAAGAAGCAGACAAGGGTTG+TGG + chr5_3:17133823-17133842 None:intergenic 50.0%
CGTGCTAGGTCGTGCATTAA+GGG + chr5_3:17134372-17134391 None:intergenic 50.0%
TCGTGCTAGGTCGTGCATTA+AGG + chr5_3:17134373-17134392 None:intergenic 50.0%
TGTTACGGTGGATCCAGAAG+GGG - chr5_3:17134416-17134435 Msa0802610:CDS 50.0%
GATGCAAACGTTGCTTCCGA+AGG - chr5_3:17134557-17134576 Msa0802610:CDS 50.0%
GTGCTCGTGTTCATGTCCTT+CGG + chr5_3:17134576-17134595 None:intergenic 50.0%
! CATTCGGAGAGTGGTCTTGA+AGG + chr5_3:17134625-17134644 None:intergenic 50.0%
GCCTCGCAAACTATACAAGC+TGG - chr5_3:17134890-17134909 Msa0802610:CDS 50.0%
GCAAGGCTCAACAACTTACG+AGG - chr5_3:17134984-17135003 Msa0802610:CDS 50.0%
CAACAACTTACGAGGCCACT+TGG - chr5_3:17134992-17135011 Msa0802610:CDS 50.0%
ATCATCATCGTCGTCCAAGC+TGG + chr5_3:17135039-17135058 None:intergenic 50.0%
CCTCATCATAGTCATCCTCG+TGG + chr5_3:17135112-17135131 None:intergenic 50.0%
CCACGAGGATGACTATGATG+AGG - chr5_3:17135109-17135128 Msa0802610:CDS 50.0%
CGAGGATGACTATGATGAGG+AGG - chr5_3:17135112-17135131 Msa0802610:CDS 50.0%
ATTGCTCTCAGTTCAGAGGG+AGG + chr5_3:17135176-17135195 None:intergenic 50.0%
GTCCTAACCTCAGGAAATGG+TGG - chr5_3:17135465-17135484 Msa0802610:CDS 50.0%
GTGGCATGCAAGTTAGGTCA+GGG + chr5_3:17135559-17135578 None:intergenic 50.0%
AGTGGCATGCAAGTTAGGTC+AGG + chr5_3:17135560-17135579 None:intergenic 50.0%
TGATCGACTGTCCTCGATGT+TGG + chr5_3:17135705-17135724 None:intergenic 50.0%
GTCGATCACCACCAGAGTAT+TGG - chr5_3:17135717-17135736 Msa0802610:CDS 50.0%
CCAAGATGTCAGCCAGATAC+CGG - chr5_3:17136163-17136182 Msa0802610:CDS 50.0%
AGCCAGATACCGGTGATGAT+TGG - chr5_3:17136173-17136192 Msa0802610:CDS 50.0%
! AGTTTTCGACAGCCCGATGC+GGG + chr5_3:17133015-17133034 None:intergenic 55.0%
! CAGTTTTCGACAGCCCGATG+CGG + chr5_3:17133016-17133035 None:intergenic 55.0%
GAACCACGTCCCAGGTCAAA+AGG - chr5_3:17133085-17133104 Msa0802610:CDS 55.0%
! GAACCTTTTGACCTGGGACG+TGG + chr5_3:17133091-17133110 None:intergenic 55.0%
TTTGGTGGAGGAACTCTCCG+AGG - chr5_3:17133160-17133179 Msa0802610:CDS 55.0%
GAGACCACTTCTATGAGGCG+TGG + chr5_3:17133192-17133211 None:intergenic 55.0%
! AGTATCGGAGAAGACGGAGG+TGG - chr5_3:17133346-17133365 Msa0802610:CDS 55.0%
GTGTGCAGCACGGTCTTTGA+GGG + chr5_3:17133585-17133604 None:intergenic 55.0%
TGTGTGCAGCACGGTCTTTG+AGG + chr5_3:17133586-17133605 None:intergenic 55.0%
GAAGCAGACAAGGGTTGTGG+TGG + chr5_3:17133820-17133839 None:intergenic 55.0%
CAAGACCACTCTCCGAATGC+TGG - chr5_3:17134626-17134645 Msa0802610:CDS 55.0%
GAGATCCAGCATTCGGAGAG+TGG + chr5_3:17134634-17134653 None:intergenic 55.0%
! GTTAGTGAGGGGTACAGCGT+GGG - chr5_3:17134945-17134964 Msa0802610:CDS 55.0%
TACAGCGTGGGTGACCTTAG+CGG - chr5_3:17134957-17134976 Msa0802610:CDS 55.0%
!! GTGACCTTAGCGGACTTGCA+AGG - chr5_3:17134967-17134986 Msa0802610:CDS 55.0%
TGAGCCTTGCAAGTCCGCTA+AGG + chr5_3:17134974-17134993 None:intergenic 55.0%
CCGGTATCTGGCTGACATCT+TGG + chr5_3:17136166-17136185 None:intergenic 55.0%
GGCCAATCATCACCGGTATC+TGG + chr5_3:17136178-17136197 None:intergenic 55.0%
TGGGACGTGGTTCTTGACCG+CGG + chr5_3:17133078-17133097 None:intergenic 60.0%
AGGTTTCGCAGCCAGACTGG+AGG + chr5_3:17133113-17133132 None:intergenic 60.0%
GACGGAGGTGGAGACAGAGT+TGG - chr5_3:17133358-17133377 Msa0802610:CDS 60.0%
ACTCGCCCGTCTCATCTTCG+AGG - chr5_3:17133505-17133524 Msa0802610:CDS 60.0%
! GGTTAGTGAGGGGTACAGCG+TGG - chr5_3:17134944-17134963 Msa0802610:CDS 60.0%
GCGGTCAAGAACCACGTCCC+AGG - chr5_3:17133077-17133096 Msa0802610:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 17132939 17136252 17132939 ID=Msa0802610;Name=Msa0802610
chr5_3 mRNA 17132939 17136252 17132939 ID=Msa0802610-mRNA-1;Parent=Msa0802610;Name=Msa0802610-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|0.5|0.33|3|0|1062
chr5_3 exon 17136028 17136252 17136028 ID=Msa0802610-mRNA-1:exon:7139;Parent=Msa0802610-mRNA-1
chr5_3 exon 17135413 17136021 17135413 ID=Msa0802610-mRNA-1:exon:7138;Parent=Msa0802610-mRNA-1
chr5_3 exon 17132939 17135293 17132939 ID=Msa0802610-mRNA-1:exon:7137;Parent=Msa0802610-mRNA-1
chr5_3 CDS 17136028 17136252 17136028 ID=Msa0802610-mRNA-1:cds;Parent=Msa0802610-mRNA-1
chr5_3 CDS 17135413 17136021 17135413 ID=Msa0802610-mRNA-1:cds;Parent=Msa0802610-mRNA-1
chr5_3 CDS 17132939 17135293 17132939 ID=Msa0802610-mRNA-1:cds;Parent=Msa0802610-mRNA-1
Gene Sequence

>Msa0802610

ATGGATATAGTTGTCCTGAAAGAAACCATTGATGAAATCCTTGCAAGGATACCTTCCCTTGAAAAGAAAAACTCCCGCATCGGGCTGTCGAAAACTGACATCAACAACCTTAATACTCCTCTCATAAAAATTCAAACCGCGGTCAAGAACCACGTCCCAGGTCAAAAGGTTCCTCCAGTCTGGCTGCGAAACCTTAAGACTGCTGTCAATGATCTGAATGATTTGGAACTCTCCGAGGATTATGCCACGCCTCATAGAAGTGGTCTCTCTTTCTTAAAGACCAGTCATCATAATAGTCGCCTCAAAGCCGTCAACTTAAAAATAAAAAATGTCATAGAGGGCATCCAAGAAGTTTCAACTAAACTGCCCAAGAACACTACCACCAGTAGTCCGCCTAAAGAAGTATCGGAGAAGACGGAGGTGGAGACAGAGTTGGCCCCATCTATAATTGGGAGAAAAGATGAAATCATAGATCAACTTATCTTGTTCAACACAAATCCTGGACCTGGAAAAGTTTCTGTGGTTACCATTGTTGGATTCGCAGGAATCGGGAAGACAAAACTCGCCCGTCTCATCTTCGAGGATGAGCAAATCAAAGATAACTATGGCTTGCAAATTTGGATTGATGATGTGGGAACCCTCAAAGACCGTGCTGCACACAAGTCATCTACTTCCGTTGAAGGAAAAGGCAACCTTGTTATACTGGACAATTTGAAAACTGAGATAGTTACTGACGAGGTGCTTGGTGATTTGGACAAGATATTAATGACATCTAATGGTTCAAGTGCAATACTCATAACCACACGTAGTAAAATTCTTGCCAACAATATTACTCCACATGTCTTTCCCGTGCTTAATGAAGTGGAATCTTGGTCATTGTTTTCAAAAATTCGTGGAGAAAGTATTTCAAAGTTTGATGTGAAGGAGGAAATTGAACAGAAAATTATGATGGATTGGAATGGAGTTCCTTTCTTGATATCATTCACAGCAATGTTTCTGAACAATCGTGTCGTTAAAGATCTGACTAAGGAGGAGTTTCTAGAATATCTTAAGGTTAGATACTACAACGAACTTCCGAGGAATCAAAAGTTGTGTTTTTCATTTTGTTCATTGTTTCCTCGAGATCATTTGATCGATGTCGAGAGATTAATTCATCTCTGGACAGCAGAAGGATTTCAATTGAATTTAGAAAACTCAACCACAGAAGAAAACTTACGCGAGTATTTCAACGACTTTGTTGGGATGCCTATTTTCAAAGACATGGAAGAAGACGAATGTGGCGCTGTAAGAAGATGTAGAATGCAACCCTTAATGCACGACCTAGCACGATTCGTATCAGATCAAATGGAGAATGTTACGGTGGATCCAGAAGGGGAAAATGTTCGTGAAGGAGTCCTAAGAGCTTCTTTTGATTTTAGCTTGGATGTTTCACATGGAATTCCACCTTCTTTGTTTCAAAAGGCAAAGAAGCTAAGGGCCATTCTCTTTTGGAAGATGCAAACGTTGCTTCCGAAGGACATGAACACGAGCACTTCCACTTATAGTCAAATATTCAAAACCTTCAAGACCACTCTCCGAATGCTGGATCTCCATGACATGGGAATCAAGACATTGCCAAAATCTATTGGGGATATGAATAATTTGAGGTATATTGACTTGTCCCTTAATACTGTAGACAAGTTACCAAATTCCATTATCAAGCTAACCAATTTGCAAACGTTGAAATTGTCTCAATGTTATCTACTCGAGGAATTACCCAAGAACATTGATGAACTAATTAACTTGAAGCATCTTGAGCTAGATGGATGCTTGGCTCTCATTCACATGCCTCGCAAACTATACAAGCTGGAAAATTCTCTACAAACGCTTTCTCTCTTTGTGGTTAGTGAGGGGTACAGCGTGGGTGACCTTAGCGGACTTGCAAGGCTCAACAACTTACGAGGCCACTTGGAAATTTCACATCTTGAAAGATCCAGCTTGGACGACGATGATGATAATTATCTCACAGGTAAAAATCAACTTCAGGGTCTTACGTTAAGATGGAACCACGAGGATGACTATGATGAGGAGGAAGAGAATGCAGACGAATATACACTTGCTTGTCTTGCTCCTCCCTCTGAACTGAGAGCAATTTCTATTGTGGGGTACATAGGTAAAACACTTCCGTATTGGTTTCCTTACATGGAATCGCTTGTTAAGCTTAGCTTGTATGACTGTACAAGTTGCATATTTCTCCCACACCTTGATGAACTTCCAAACCTCAAATTTCTCGAACTTCTAAGGTTGGAGAAACTGCAATATATTGCTGATGAAAAAGATGGCGACAATGAAAACGACAATGACAATTTACAAGATGCTGCAGTTTACTTTCCATCCTTGGAGGAACTCACAATCTCAGATTGTCCTAACCTCAGGAAATGGTGGAAAATGCATAAAACCGAAAAAGATTTACCGGTTTTTGCTTGCCTTTCAAAACTTCATGTATATTACTGCCCTGACCTAACTTGCATGCCACTTTTTCCTGGTCTTGATGAAGAGCTAGTTCTCACGGGTTCAAGTGTGCAGCCACTACTTGAAACAATACGTCATGGCAGGAGAAAGGGTAATAAGTTTTCTAAACTCAAGTCAATGAAAATTGCCAACATCGAGGACAGTCGATCACCACCAGAGTATTGGATCAAATACTTCAATTCTCTTGAGAAACTTGTCATTAAAGATTGGAAGGATCTAAAGTCTCTTCCCAAAGGTTTCGATCATCTGACCTCACTCCAAAGTCTTAACATTGAAAACTGTCAAGAACTTGATCTTCACCTCTCAAGTATTAAATGGGAAGGTCTGAAAAACCTGCGTTCTTTAACCATAAGGGAAAATTCAAAACTGAAGACTCTTCCATTGGGTGTTTACAAAGCAACATCTCTCCAAGATCTTCAGCTTCATAACTGTCCTCAAATGACTTCTTTGTCTGAAACCATAGACAACCTCAAATCACTTGAGAAATTGGTTATTTCTGAATGTGACAAGTTGGCTTCGCTTCCTAAAGCATTGAAAAATTTGGAGGATCTGCATACTTTGATCATTTTGGATTGTACCTTGTTGTTGCCAAGATGTCAGCCAGATACCGGTGATGATTGGCCACAAATTAAGCATATAAAAAATAAACAGGTCATGAAAACTAATCCATACATTTAG
Protein sequence

>Msa0802610

MDIVVLKETIDEILARIPSLEKKNSRIGLSKTDINNLNTPLIKIQTAVKNHVPGQKVPPVWLRNLKTAVNDLNDLELSEDYATPHRSGLSFLKTSHHNSRLKAVNLKIKNVIEGIQEVSTKLPKNTTTSSPPKEVSEKTEVETELAPSIIGRKDEIIDQLILFNTNPGPGKVSVVTIVGFAGIGKTKLARLIFEDEQIKDNYGLQIWIDDVGTLKDRAAHKSSTSVEGKGNLVILDNLKTEIVTDEVLGDLDKILMTSNGSSAILITTRSKILANNITPHVFPVLNEVESWSLFSKIRGESISKFDVKEEIEQKIMMDWNGVPFLISFTAMFLNNRVVKDLTKEEFLEYLKVRYYNELPRNQKLCFSFCSLFPRDHLIDVERLIHLWTAEGFQLNLENSTTEENLREYFNDFVGMPIFKDMEEDECGAVRRCRMQPLMHDLARFVSDQMENVTVDPEGENVREGVLRASFDFSLDVSHGIPPSLFQKAKKLRAILFWKMQTLLPKDMNTSTSTYSQIFKTFKTTLRMLDLHDMGIKTLPKSIGDMNNLRYIDLSLNTVDKLPNSIIKLTNLQTLKLSQCYLLEELPKNIDELINLKHLELDGCLALIHMPRKLYKLENSLQTLSLFVVSEGYSVGDLSGLARLNNLRGHLEISHLERSSLDDDDDNYLTGKNQLQGLTLRWNHEDDYDEEEENADEYTLACLAPPSELRAISIVGYIGKTLPYWFPYMESLVKLSLYDCTSCIFLPHLDELPNLKFLELLRLEKLQYIADEKDGDNENDNDNLQDAAVYFPSLEELTISDCPNLRKWWKMHKTEKDLPVFACLSKLHVYYCPDLTCMPLFPGLDEELVLTGSSVQPLLETIRHGRRKGNKFSKLKSMKIANIEDSRSPPEYWIKYFNSLEKLVIKDWKDLKSLPKGFDHLTSLQSLNIENCQELDLHLSSIKWEGLKNLRSLTIRENSKLKTLPLGVYKATSLQDLQLHNCPQMTSLSETIDNLKSLEKLVISECDKLASLPKALKNLEDLHTLIILDCTLLLPRCQPDTGDDWPQIKHIKNKQVMKTNPYI*