AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0357550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0357550 MtrunA17_Chr3g0095791 63.147 502 107 11 1 430 196 691 0.0 555
Msa0357550 MtrunA17_Chr2g0307191 55.976 502 143 12 1 430 197 692 2.25e-169 491
Msa0357550 MtrunA17_Chr2g0298581 82.246 276 49 0 1 276 197 472 9.63e-168 487
Msa0357550 MtrunA17_Chr2g0298581 66.667 180 52 2 253 430 519 692 1.26e-76 251
Msa0357550 MtrunA17_Chr3g0077511 76.087 276 66 0 1 276 197 472 4.11e-146 432
Msa0357550 MtrunA17_Chr3g0077511 62.637 182 58 3 253 430 519 694 1.23e-70 236
Msa0357550 MtrunA17_Chr4g0046401 46.415 265 132 2 17 274 230 491 1.12e-75 250
Msa0357550 MtrunA17_Chr4g0046401 34.043 141 92 1 289 428 572 712 5.74e-23 101
Msa0357550 MtrunA17_Chr1g0186381 46.591 264 128 5 19 274 232 490 2.85e-71 238
Msa0357550 MtrunA17_Chr1g0186381 33.854 192 119 3 238 428 527 711 5.53e-34 134
Msa0357550 MtrunA17_Chr2g0307231 77.451 102 23 0 112 213 1 102 3.61e-49 162
Msa0357550 MtrunA17_Chr4g0073711 32.692 312 154 5 18 276 470 778 4.75e-48 176
Msa0357550 MtrunA17_Chr8g0364641 34.797 296 152 5 20 276 426 719 1.70e-47 174
Msa0357550 MtrunA17_Chr8g0379241 29.577 355 186 6 20 317 417 764 2.34e-47 174
Msa0357550 MtrunA17_Chr3g0102531 36.929 241 138 3 34 274 257 483 3.14e-47 172
Msa0357550 MtrunA17_Chr3g0102531 26.250 160 115 2 272 428 547 706 1.68e-11 66.2
Msa0357550 MtrunA17_Chr3g0102541 36.290 248 130 4 34 274 258 484 2.61e-46 170
Msa0357550 MtrunA17_Chr3g0102541 26.994 163 113 2 272 428 548 710 3.00e-11 65.5
Msa0357550 MtrunA17_Chr2g0284211 31.132 318 156 5 20 276 402 717 3.72e-45 167
Msa0357550 MtrunA17_Chr3g0102551 36.515 241 134 2 34 274 268 489 1.32e-44 165
Msa0357550 MtrunA17_Chr4g0025201 35.206 267 161 6 19 274 227 492 1.80e-43 162
Msa0357550 MtrunA17_Chr2g0322371 34.043 282 175 5 20 292 227 506 8.31e-43 160
Msa0357550 MtrunA17_Chr1g0183381 31.148 305 160 5 20 276 344 646 1.25e-42 160
Msa0357550 MtrunA17_Chr2g0322351 34.701 268 162 3 20 274 229 496 1.33e-42 159
Msa0357550 MtrunA17_Chr2g0322361 32.632 285 178 5 20 292 234 516 1.49e-40 154
Msa0357550 MtrunA17_Chr5g0410641 30.100 299 152 4 34 276 567 864 5.71e-39 149
Msa0357550 MtrunA17_Chr2g0297351 30.847 295 152 5 33 276 474 767 7.52e-39 149
Msa0357550 MtrunA17_Chr4g0039801 31.310 313 158 6 20 276 574 885 8.70e-39 149
Msa0357550 MtrunA17_Chr1g0165411 30.897 301 158 6 24 276 548 846 8.74e-39 149
Msa0357550 MtrunA17_Chr1g0165421 30.091 329 164 7 10 276 550 874 5.10e-38 147
Msa0357550 MtrunA17_Chr1g0201731 40.764 157 84 2 18 165 510 666 4.19e-33 132
Msa0357550 MtrunA17_Chr1g0201731 35.514 107 67 1 170 276 734 838 8.71e-14 73.6
Msa0357550 MtrunA17_Chr8g0352231 39.744 156 86 1 18 165 490 645 1.29e-32 130
Msa0357550 MtrunA17_Chr8g0352231 36.792 106 65 1 171 276 715 818 2.13e-16 82.0
Msa0357550 MtrunA17_Chr2g0296991 39.216 153 85 1 18 162 441 593 2.09e-32 130
Msa0357550 MtrunA17_Chr2g0296991 34.615 104 66 1 173 276 684 785 4.30e-14 74.7
Msa0357550 MtrunA17_Chr7g0267731 40.541 148 80 1 18 157 402 549 5.18e-32 129
Msa0357550 MtrunA17_Chr7g0267731 37.624 101 61 1 176 276 628 726 7.25e-16 80.1
Msa0357550 MtrunA17_Chr3g0088821 40.411 146 79 1 20 157 492 637 5.21e-32 129
Msa0357550 MtrunA17_Chr3g0088821 36.449 107 66 1 170 276 714 818 4.43e-16 80.9
Msa0357550 MtrunA17_Chr7g0274751 30.314 287 145 5 20 252 362 647 1.57e-31 127
Msa0357550 MtrunA17_Chr8g0383701 38.854 157 87 3 18 165 508 664 2.45e-30 124
Msa0357550 MtrunA17_Chr8g0383701 24.545 330 172 9 170 429 733 1055 1.99e-20 94.4
Msa0357550 MtrunA17_Chr3g0137951 41.096 146 78 1 20 157 502 647 4.13e-29 120
Msa0357550 MtrunA17_Chr3g0137951 33.654 104 67 1 173 276 725 826 7.88e-13 70.9
Msa0357550 MtrunA17_Chr3g0078671 37.580 157 89 2 18 165 457 613 6.39e-29 120
Msa0357550 MtrunA17_Chr3g0078671 33.000 100 65 1 176 275 688 785 7.59e-12 67.8
Msa0357550 MtrunA17_Chr2g0322341 43.636 110 58 1 20 125 234 343 2.61e-26 108
Msa0357550 MtrunA17_Chr7g0269741 37.584 149 92 1 20 168 597 744 3.03e-26 112
Msa0357550 MtrunA17_Chr2g0322331 39.423 104 59 2 166 267 22 123 6.58e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0357550 AT4G24000.2 28.838 482 252 13 12 423 38 498 2.52e-61 207
Msa0357550 AT4G24000.1 28.838 482 252 13 12 423 230 690 3.28e-60 208
Msa0357550 AT4G24010.1 39.453 256 129 5 19 265 238 476 1.39e-52 188
Msa0357550 AT4G24010.1 32.237 152 99 3 277 426 554 703 2.25e-18 88.2
Msa0357550 AT4G23990.2 36.397 272 145 5 12 274 38 290 3.14e-52 184
Msa0357550 AT4G23990.1 38.603 272 139 7 12 274 252 504 5.73e-51 183
Msa0357550 AT4G23990.1 27.517 149 104 3 277 423 573 719 1.12e-12 70.5
Msa0357550 AT5G17420.1 32.692 312 155 4 18 276 457 766 1.19e-50 184
Msa0357550 AT2G21770.1 32.424 330 150 5 18 276 501 828 2.38e-49 181
Msa0357550 AT4G18780.1 32.087 321 152 5 20 276 405 723 6.25e-47 173
Msa0357550 AT1G55850.1 35.409 257 136 4 23 274 250 481 3.16e-46 170
Msa0357550 AT2G32620.2 35.018 277 153 7 19 274 229 499 1.71e-43 160
Msa0357550 AT2G32620.4 35.018 277 153 7 19 274 133 403 3.79e-43 160
Msa0357550 AT2G25540.1 30.887 327 154 5 20 276 476 800 4.12e-43 162
Msa0357550 AT2G32620.3 35.018 277 153 7 19 274 229 499 7.26e-43 159
Msa0357550 AT2G32620.1 35.018 277 153 7 19 274 229 499 1.07e-42 160
Msa0357550 AT2G32540.1 34.286 280 151 7 19 274 229 499 4.64e-42 158
Msa0357550 AT2G32530.1 34.296 277 155 7 19 274 229 499 2.82e-41 156
Msa0357550 AT4G15320.3 35.018 277 152 8 19 274 229 498 4.97e-41 155
Msa0357550 AT4G15320.5 35.018 277 152 8 19 274 229 498 5.59e-41 155
Msa0357550 AT4G15320.4 35.018 277 152 8 19 274 244 513 5.94e-41 155
Msa0357550 AT2G32610.1 33.574 277 157 6 19 274 230 500 1.06e-39 152
Msa0357550 AT4G38190.1 29.966 297 168 4 19 276 554 849 1.62e-39 152
Msa0357550 AT4G15290.1 34.296 277 154 7 19 274 229 498 2.04e-39 150
Msa0357550 AT1G02730.1 30.218 321 159 5 20 276 605 924 8.32e-38 147
Msa0357550 AT3G03050.1 30.097 309 159 6 24 276 581 888 2.39e-37 145
Msa0357550 AT5G16910.1 30.065 306 160 6 24 276 584 888 3.20e-37 145
Msa0357550 AT1G32180.1 29.966 297 153 5 34 276 428 723 1.54e-36 143
Msa0357550 AT1G32180.2 29.966 297 153 5 34 276 428 723 1.54e-36 143
Msa0357550 AT2G33100.2 28.477 302 157 5 33 276 481 781 2.39e-35 139
Msa0357550 AT2G33100.1 28.477 302 157 5 33 276 481 781 2.39e-35 139
Msa0357550 AT4G32410.1 28.308 325 165 4 20 276 496 820 5.23e-35 138
Msa0357550 AT5G09870.1 42.675 157 81 2 18 165 483 639 1.40e-34 137
Msa0357550 AT5G09870.1 23.939 330 174 8 170 429 706 1028 2.00e-18 88.6
Msa0357550 AT5G64740.1 42.038 157 82 2 18 165 495 651 3.17e-34 136
Msa0357550 AT5G64740.1 22.727 330 178 9 170 429 721 1043 8.17e-19 89.7
Msa0357550 AT4G15320.2 30.031 323 152 9 19 274 229 544 2.59e-33 133
Msa0357550 AT4G15320.1 30.945 307 145 8 28 274 288 587 4.72e-33 132
Msa0357550 AT4G39350.1 41.892 148 78 1 18 157 496 643 8.74e-33 132
Msa0357550 AT4G39350.1 24.924 329 172 8 170 429 720 1042 1.69e-17 85.9
Msa0357550 AT5G05170.1 38.961 154 86 1 20 165 480 633 4.67e-31 126
Msa0357550 AT5G05170.1 23.653 334 171 8 170 429 701 1024 2.05e-20 94.7
Msa0357550 AT5G44030.3 39.726 146 80 1 20 157 157 302 4.17e-30 123
Msa0357550 AT5G44030.3 36.792 106 65 1 171 276 406 509 2.13e-15 79.0
Msa0357550 AT5G44030.2 39.726 146 80 1 20 157 465 610 7.85e-30 123
Msa0357550 AT5G44030.2 36.792 106 65 1 171 276 714 817 2.75e-15 79.0
Msa0357550 AT5G44030.1 39.726 146 80 1 20 157 436 581 8.12e-30 123
Msa0357550 AT5G44030.1 36.792 106 65 1 171 276 685 788 2.98e-15 78.6

Find 88 sgRNAs with CRISPR-Local

Find 1039 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAACATTGTTTGCTTCTT+TGG 0.132316 3_1:-40877262 Msa0357550:CDS
TGATTACAGCTTAGGGTTTC+AGG 0.132827 3_1:-40892136 Msa0357550:intron
TTTGCTTCTTTGGTGGTTTA+TGG 0.157159 3_1:-40877252 Msa0357550:CDS
GCAAGATCTTTGGAGGTTTC+AGG 0.182973 3_1:+40892016 None:intergenic
TTGTTCATCCCACCAAATTC+TGG 0.226805 3_1:+40877483 None:intergenic
CAATCTAAGACAAGTAAATA+AGG 0.260314 3_1:+40892097 None:intergenic
CCAGTTTGTGTTACTTTCAT+AGG 0.261272 3_1:+40882644 None:intergenic
CTTATAATCCCCTCAATAAT+AGG 0.283744 3_1:+40877151 None:intergenic
AGTAGAAGTGCATTACTCTT+TGG 0.327163 3_1:-40891758 Msa0357550:CDS
TTGGACAAAAGCAAGATCTT+TGG 0.335103 3_1:+40892006 None:intergenic
TGTGGAACATTTGAGGGAAT+TGG 0.337598 3_1:+40891987 None:intergenic
AAACTTGAGAGTACCGTTAC+TGG 0.362985 3_1:-40878685 Msa0357550:CDS
GTGGTGGCTCCTCCAGAATT+TGG 0.369642 3_1:-40877495 Msa0357550:CDS
TGAAGGTGCAACATTGTTCA+TGG 0.370739 3_1:-40877308 Msa0357550:CDS
CTTAATGCCGAAACCAACTA+TGG 0.371003 3_1:-40882780 Msa0357550:CDS
TTTGGAAGTCCAAAACAAAA+AGG 0.371272 3_1:-40891740 Msa0357550:intron
AGACTTGCCATAGTTGGTTT+CGG 0.383586 3_1:+40882773 None:intergenic
AGTTTGATTGTAAAATCAAT+TGG 0.395815 3_1:-40877457 Msa0357550:CDS
ATCTTCGTGTGGTGAATGAT+AGG 0.398588 3_1:-40892730 Msa0357550:CDS
CCTATGAAAGTAACACAAAC+TGG 0.407291 3_1:-40882644 Msa0357550:CDS
TATCTTTCTTGCTGAGGTTG+TGG 0.415505 3_1:+40891969 None:intergenic
CATAGCAGACTTGCCATAGT+TGG 0.435654 3_1:+40882767 None:intergenic
GAAAGATATATATGATAGTC+AGG 0.437126 3_1:-40891954 Msa0357550:CDS
GATTACAGCTTAGGGTTTCA+GGG 0.439711 3_1:-40892135 Msa0357550:intron
TCTAAGTTATCCTATTATTG+AGG 0.444182 3_1:-40877161 Msa0357550:CDS
TTGTATCTATGAGGAACATA+TGG 0.444562 3_1:+40892289 None:intergenic
ATTATGAGCAACACAATCAA+TGG 0.451362 3_1:+40877283 None:intergenic
ACCTCCATCCTCTGCAATGA+AGG 0.452138 3_1:+40878656 None:intergenic
AACATTGTTTGCTTCTTTGG+TGG 0.455728 3_1:-40877259 Msa0357550:CDS
CTAAGTTATCCTATTATTGA+GGG 0.461749 3_1:-40877160 Msa0357550:CDS
CTGAGGTTGTGGAACATTTG+AGG 0.465490 3_1:+40891980 None:intergenic
AATCTAAGACAAGTAAATAA+GGG 0.470736 3_1:+40892098 None:intergenic
GAAGATCATTAATGACGAAA+AGG 0.471278 3_1:-40892350 Msa0357550:intron
TAAGTATGAAACGCAAGGTT+GGG 0.483268 3_1:-40877132 Msa0357550:CDS
TAAGGTAAAGCAATATGAGC+AGG 0.488142 3_1:-40877344 Msa0357550:CDS
ACCTCCTTCATTGCAGAGGA+TGG 0.492040 3_1:-40878660 Msa0357550:CDS
GACAAAAGCAAGATCTTTGG+AGG 0.493169 3_1:+40892009 None:intergenic
TGATAGGCCTTCTCTTATTG+AGG 0.493986 3_1:-40892714 Msa0357550:intron
AATATAATGTTGAATTTGAG+TGG 0.511523 3_1:+40877531 None:intergenic
CATATATATCTTTCTTGCTG+AGG 0.513706 3_1:+40891963 None:intergenic
TGAGGTTGTGGAACATTTGA+GGG 0.514296 3_1:+40891981 None:intergenic
CAAAGCAGTTGACAAAGATA+AGG 0.514880 3_1:-40877362 Msa0357550:CDS
ATGGATGGATTAAGAGGTCC+AGG 0.518984 3_1:-40891806 Msa0357550:CDS
ACAAGGTGGAAAGGAATGGA+TGG 0.522363 3_1:-40891821 Msa0357550:CDS
TCAAATTCAACATTATATTG+AGG 0.524787 3_1:-40877527 Msa0357550:CDS
TTAAGAGGTCCAGGTCTCAC+TGG 0.525833 3_1:-40891797 Msa0357550:CDS
GCTCCTCCTTTGTATCTATG+AGG 0.526763 3_1:+40892280 None:intergenic
GGTCCAGGTCTCACTGGCAG+TGG 0.527591 3_1:-40891791 Msa0357550:CDS
AAAATGGTTTGGGTTGAACA+AGG 0.531329 3_1:-40877404 Msa0357550:CDS
GTGGCTCCTCCAGAATTTGG+TGG 0.535117 3_1:-40877492 Msa0357550:CDS
TTCTATTAGACAAGGTGGAA+AGG 0.538567 3_1:-40891830 Msa0357550:intron
TTAGACAAGGTGGAAAGGAA+TGG 0.550173 3_1:-40891825 Msa0357550:intron
CAATCCCTCTTTCATGTCAG+TGG 0.552279 3_1:+40878588 None:intergenic
TGTTACAGGTTACAGAACCT+TGG 0.553078 3_1:-40877582 Msa0357550:intron
ATAAGTATGAAACGCAAGGT+TGG 0.556954 3_1:-40877133 Msa0357550:CDS
AAATGGTTTGGGTTGAACAA+GGG 0.557787 3_1:-40877403 Msa0357550:CDS
TTTCCACTGCCAGTGAGACC+TGG 0.561449 3_1:+40891788 None:intergenic
GTCATTTCTATTAGACAAGG+TGG 0.561819 3_1:-40891835 Msa0357550:intron
ATTGAGGTAATTTCAAGTGG+TGG 0.566111 3_1:-40877511 Msa0357550:CDS
TGCACCCACTGACATGAAAG+AGG 0.566701 3_1:-40878593 Msa0357550:CDS
TATATTGAGGTAATTTCAAG+TGG 0.585743 3_1:-40877514 Msa0357550:CDS
ATGGAGACTACTCAATGTGA+AGG 0.587324 3_1:-40877233 Msa0357550:CDS
TAAGTTATCCTATTATTGAG+GGG 0.588766 3_1:-40877159 Msa0357550:CDS
TGGCTCCTCCAGAATTTGGT+GGG 0.594327 3_1:-40877491 Msa0357550:CDS
GAAAGAGGGATTGCTTCAGT+TGG 0.598558 3_1:-40878578 Msa0357550:intron
TTCATCCCACCAAATTCTGG+AGG 0.600177 3_1:+40877486 None:intergenic
AATCCCTCTTTCATGTCAGT+GGG 0.600324 3_1:+40878589 None:intergenic
TGACGAAAAGGAAATGCCAC+TGG 0.604632 3_1:-40892338 Msa0357550:CDS
GGCTACCTCCTTCATTGCAG+AGG 0.605797 3_1:-40878664 Msa0357550:CDS
TATGTTCCTCATAGATACAA+AGG 0.607561 3_1:-40892286 Msa0357550:CDS
AAAGGAATGGATGGATTAAG+AGG 0.618466 3_1:-40891812 Msa0357550:CDS
TTTACAAGAAGCGAGTGTAG+TGG 0.619981 3_1:-40882676 Msa0357550:CDS
ATGAAGGAGGTAGCCAGTAA+CGG 0.622292 3_1:+40878672 None:intergenic
AGGGGTACCTCAATAAGAGA+AGG 0.625818 3_1:+40892707 None:intergenic
ATATATATGATAGTCAGGCT+AGG 0.626693 3_1:-40891949 Msa0357550:CDS
AAGGTAAAGCAATATGAGCA+GGG 0.632419 3_1:-40877343 Msa0357550:CDS
TCCATCCTCTGCAATGAAGG+AGG 0.634394 3_1:+40878659 None:intergenic
GATTATAAGTATGAAACGCA+AGG 0.635785 3_1:-40877137 Msa0357550:CDS
AGGAGGAGCACTCAATACAT+TGG 0.635787 3_1:-40892266 Msa0357550:intron
GAGTCACTGAAAGCAATATG+TGG 0.636647 3_1:-40882738 Msa0357550:CDS
GTTTCAGGGCTAATCAGCAA+TGG 0.643883 3_1:-40892121 Msa0357550:CDS
TCCTTCATTGCAGAGGATGG+AGG 0.645824 3_1:-40878657 Msa0357550:CDS
GCACCCACTGACATGAAAGA+GGG 0.658795 3_1:-40878592 Msa0357550:CDS
ACTGTAAACACTATAAACCA+AGG 0.661029 3_1:+40877565 None:intergenic
CGAGACACATAAACAACCAG+TGG 0.668168 3_1:+40892322 None:intergenic
GGTGCACATCCTAAGAAACA+TGG 0.692331 3_1:+40878610 None:intergenic
TAACACAAACTGGAGTACTG+AGG 0.700667 3_1:-40882634 Msa0357550:intron
GTTCCTCATAGATACAAAGG+AGG 0.702078 3_1:-40892283 Msa0357550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAGTAATTATAAAATCA+TGG - chr3_1:40881655-40881674 Msa0357550:intron 10.0%
!!! ATTGTTTTTATCATATTTAT+TGG + chr3_1:40886870-40886889 None:intergenic 10.0%
!!! TTTTTTTTTTTAATTCATAG+TGG - chr3_1:40886950-40886969 Msa0357550:intron 10.0%
!!! TTTAATATTTTAGTTTTTGA+TGG - chr3_1:40887230-40887249 Msa0357550:intron 10.0%
!!! TATTGTTTTTTAAAATTGAA+AGG + chr3_1:40887544-40887563 None:intergenic 10.0%
!!! TTTCTCTAAAAAATAAAATA+AGG - chr3_1:40888019-40888038 Msa0357550:intron 10.0%
!!! ATGTTTTCAAATTAAAAAAT+AGG - chr3_1:40888128-40888147 Msa0357550:intron 10.0%
!!! TGTTTTCAAATTAAAAAATA+GGG - chr3_1:40888129-40888148 Msa0357550:intron 10.0%
!! AGTACATATTTAATTATTAA+GGG + chr3_1:40888481-40888500 None:intergenic 10.0%
!! TAGTACATATTTAATTATTA+AGG + chr3_1:40888482-40888501 None:intergenic 10.0%
!! CTTTATAATTTAAATATCAA+TGG - chr3_1:40888586-40888605 Msa0357550:intron 10.0%
!!! TTGTTTCATATTTTATAATA+GGG - chr3_1:40888719-40888738 Msa0357550:intron 10.0%
!! TTACAAAAAAAATAAGATAA+AGG + chr3_1:40889720-40889739 None:intergenic 10.0%
!!! TTATTTTTTTTGTAACAATT+TGG - chr3_1:40889725-40889744 Msa0357550:intron 10.0%
!! TAATAAAAAAAATGAGAAAA+AGG - chr3_1:40890504-40890523 Msa0357550:intron 10.0%
!!! CTATAAAAAAAAACAATTTT+AGG + chr3_1:40890675-40890694 None:intergenic 10.0%
!!! TTTAGAATGTATTTTTTATT+TGG + chr3_1:40890814-40890833 None:intergenic 10.0%
!! TAAAAAATACATTCTAAATA+TGG - chr3_1:40890816-40890835 Msa0357550:intron 10.0%
!! AAAAAATACATTCTAAATAT+GGG - chr3_1:40890817-40890836 Msa0357550:intron 10.0%
!!! ATAAAAAACTATTTTTGTAT+AGG - chr3_1:40891483-40891502 Msa0357550:intron 10.0%
!! TAAATTAATATACTTAATCA+AGG + chr3_1:40892161-40892180 None:intergenic 10.0%
!! TATTAATTTATTTATGTTAC+AGG - chr3_1:40892171-40892190 Msa0357550:intron 10.0%
!! TTAATTTAAAGAAAATTACG+AGG + chr3_1:40877559-40877578 None:intergenic 15.0%
!! AATAAACAGACATAAATTAA+TGG + chr3_1:40877891-40877910 None:intergenic 15.0%
!! AACTATCAAAGTTTAAAAAA+GGG + chr3_1:40878169-40878188 None:intergenic 15.0%
!! AAACTATCAAAGTTTAAAAA+AGG + chr3_1:40878170-40878189 None:intergenic 15.0%
!! TAATTACTAAATGTTAAGAT+AGG + chr3_1:40881647-40881666 None:intergenic 15.0%
!!! ATAGAATATTTTATGATGAT+GGG + chr3_1:40883289-40883308 None:intergenic 15.0%
!! AAGAGATATTTATATCATTT+GGG + chr3_1:40886437-40886456 None:intergenic 15.0%
!! TAAGAGATATTTATATCATT+TGG + chr3_1:40886438-40886457 None:intergenic 15.0%
!!! TATTTTTGAAAACTTTTTAC+AGG - chr3_1:40886703-40886722 Msa0357550:intron 15.0%
!!! TGATAAAAACAATTTTAATG+AGG - chr3_1:40886877-40886896 Msa0357550:intron 15.0%
!!! ATTTGAAGATCTTTTTATAA+AGG + chr3_1:40887287-40887306 None:intergenic 15.0%
!! TTATAAAAAGATCTTCAAAT+TGG - chr3_1:40887287-40887306 Msa0357550:intron 15.0%
!!! ATGTTTTTTTGTATGTTTTA+CGG - chr3_1:40887644-40887663 Msa0357550:intron 15.0%
!!! TTATTTGAATAACCATTTTA+TGG - chr3_1:40887725-40887744 Msa0357550:intron 15.0%
!!! TATTTGAATAACCATTTTAT+GGG - chr3_1:40887726-40887745 Msa0357550:intron 15.0%
!!! ATCTGAAATTTTTAAAATTG+AGG - chr3_1:40888101-40888120 Msa0357550:intron 15.0%
!! AAAAGTTAATCTTAATCATA+AGG - chr3_1:40888318-40888337 Msa0357550:intron 15.0%
!!! ATGTATATTTTAACATAAGA+GGG + chr3_1:40888393-40888412 None:intergenic 15.0%
!!! AATGTATATTTTAACATAAG+AGG + chr3_1:40888394-40888413 None:intergenic 15.0%
!!! GTGTAGATTTTATTTTTAAA+GGG + chr3_1:40888422-40888441 None:intergenic 15.0%
!!! AGTGTAGATTTTATTTTTAA+AGG + chr3_1:40888423-40888442 None:intergenic 15.0%
!! TATTTAATTATTAAGGGAAA+GGG + chr3_1:40888475-40888494 None:intergenic 15.0%
!! ATATTTAATTATTAAGGGAA+AGG + chr3_1:40888476-40888495 None:intergenic 15.0%
!!! ATGAATCTATTTTTCTTAAA+TGG + chr3_1:40888564-40888583 None:intergenic 15.0%
!! TTACTAAATACAGTAAAATA+TGG + chr3_1:40888677-40888696 None:intergenic 15.0%
!!! GTTGTTTCATATTTTATAAT+AGG - chr3_1:40888718-40888737 Msa0357550:intron 15.0%
!!! ACTTAAAAAAAAAAGTATTG+CGG + chr3_1:40888826-40888845 None:intergenic 15.0%
!! ACAAAATTGAACAATAAAAA+TGG - chr3_1:40889539-40889558 Msa0357550:intron 15.0%
!! CAAAATTGAACAATAAAAAT+GGG - chr3_1:40889540-40889559 Msa0357550:intron 15.0%
!! TAACATTAATTCATGATATT+TGG - chr3_1:40890328-40890347 Msa0357550:intron 15.0%
!!! CTTATTTATTTGTAACATTT+TGG + chr3_1:40890590-40890609 None:intergenic 15.0%
!! AATCAAAATGTAATATACAT+TGG + chr3_1:40890733-40890752 None:intergenic 15.0%
!!! AATGTATATTACATTTTGAT+TGG - chr3_1:40890732-40890751 Msa0357550:intron 15.0%
!! ATATCAATCAAGTTAATAAT+GGG + chr3_1:40891035-40891054 None:intergenic 15.0%
!! TAATTATGCAATAAAAAGAG+CGG + chr3_1:40877275-40877294 None:intergenic 20.0%
!! TAAAATCCTCTTAAAAAGTT+TGG - chr3_1:40877345-40877364 Msa0357550:CDS 20.0%
!! AAAATCCTCTTAAAAAGTTT+GGG - chr3_1:40877346-40877365 Msa0357550:CDS 20.0%
!!! AATCTAAGACAAGTAAATAA+GGG + chr3_1:40877672-40877691 None:intergenic 20.0%
!!! AAGGTGAAGATTTTAAATTT+TGG + chr3_1:40877864-40877883 None:intergenic 20.0%
!! GTACATATAGCATTATTATA+GGG - chr3_1:40878049-40878068 Msa0357550:intron 20.0%
!!! TTTAAACTTTGATAGTTTTG+AGG - chr3_1:40878172-40878191 Msa0357550:intron 20.0%
!!! TTAAACTTTGATAGTTTTGA+GGG - chr3_1:40878173-40878192 Msa0357550:intron 20.0%
!!! AATTTCATCTTACTTGTTAT+AGG - chr3_1:40878746-40878765 Msa0357550:intron 20.0%
!!! CATTATCTTGATTCATTTTA+TGG - chr3_1:40879020-40879039 Msa0357550:intron 20.0%
!! AGAGATAATATGATAAGAAT+CGG + chr3_1:40879508-40879527 None:intergenic 20.0%
!!! AATATCATTTTTAAGAGTTC+TGG + chr3_1:40879821-40879840 None:intergenic 20.0%
!! GAGTATAATATGAAAACTTA+GGG + chr3_1:40879988-40880007 None:intergenic 20.0%
!! TGAGTATAATATGAAAACTT+AGG + chr3_1:40879989-40880008 None:intergenic 20.0%
!! AAGAGATATTTAGATCATTT+GGG + chr3_1:40880612-40880631 None:intergenic 20.0%
!! TAAGAGATATTTAGATCATT+TGG + chr3_1:40880613-40880632 None:intergenic 20.0%
!! TTCAAGAAATTTCTAATCAT+TGG - chr3_1:40881378-40881397 Msa0357550:intron 20.0%
!! CATATGTTTACTTGATTAAA+AGG - chr3_1:40881418-40881437 Msa0357550:intron 20.0%
!! AAATGTTAAGATAGGTATTA+AGG + chr3_1:40881639-40881658 None:intergenic 20.0%
!! CAGTGTATTTATATATATAG+TGG + chr3_1:40882560-40882579 None:intergenic 20.0%
!! TATATAAATACACTGAATCT+AGG - chr3_1:40882565-40882584 Msa0357550:intron 20.0%
!!! CCTAAAGTTTATATGATTTT+AGG + chr3_1:40882762-40882781 None:intergenic 20.0%
!! CCTAAAATCATATAAACTTT+AGG - chr3_1:40882759-40882778 Msa0357550:CDS 20.0%
!!! GATAGAATATTTTATGATGA+TGG + chr3_1:40883290-40883309 None:intergenic 20.0%
!! TATTTCAAACTCTTTACTTA+CGG - chr3_1:40883670-40883689 Msa0357550:intron 20.0%
!!! AATTTCATCTTACTTGTTAT+AGG - chr3_1:40878746-40878765 Msa0357550:intron 20.0%
!!! CATTATCTTGATTCATTTTA+TGG - chr3_1:40879020-40879039 Msa0357550:intron 20.0%
!!! TAATATTAGTCTTAACATCA+TGG - chr3_1:40884999-40885018 Msa0357550:intron 20.0%
!!! AATATCATTTTTAAGAGTTC+TGG + chr3_1:40879821-40879840 None:intergenic 20.0%
!! GAGTATAATATGAAAACTTA+GGG + chr3_1:40879988-40880007 None:intergenic 20.0%
!! TGAGTATAATATGAAAACTT+AGG + chr3_1:40879989-40880008 None:intergenic 20.0%
!! AGAGATATTTATATCATTTG+GGG + chr3_1:40886436-40886455 None:intergenic 20.0%
!!! AAAGTTTTCAAAAATAGCAT+TGG + chr3_1:40886699-40886718 None:intergenic 20.0%
!!! GTTTTTATCATATTTATTGG+TGG + chr3_1:40886867-40886886 None:intergenic 20.0%
!!! TTAATTAATTTGTCTCTCAA+AGG + chr3_1:40886928-40886947 None:intergenic 20.0%
!!! ACTTTGATGATAATAAATAG+AGG - chr3_1:40887698-40887717 Msa0357550:intron 20.0%
!! ACTAACAAGAGAAAATAAAA+AGG - chr3_1:40888169-40888188 Msa0357550:intron 20.0%
!!! TATGCATATTACATTTTGAT+TGG + chr3_1:40888251-40888270 None:intergenic 20.0%
!!! TGTATATTTTAACATAAGAG+GGG + chr3_1:40888392-40888411 None:intergenic 20.0%
!!! AATCTATTTTTCTTAAATGG+TGG + chr3_1:40888561-40888580 None:intergenic 20.0%
!!! CTTAAAAAAAAAAGTATTGC+GGG + chr3_1:40888825-40888844 None:intergenic 20.0%
!! CAAAATTGAACAATCAAAAT+GGG + chr3_1:40889064-40889083 None:intergenic 20.0%
!! ACAAAATTGAACAATCAAAA+TGG + chr3_1:40889065-40889084 None:intergenic 20.0%
!!! ATCGTGACTTTTTTTTATTT+AGG - chr3_1:40889151-40889170 Msa0357550:intron 20.0%
!!! CTTTTTGATTTGATTTTTCT+TGG + chr3_1:40889400-40889419 None:intergenic 20.0%
!! TGAACACCTAAATATAATTA+AGG - chr3_1:40889676-40889695 Msa0357550:intron 20.0%
!! ATCTTGCCTTAATTATATTT+AGG + chr3_1:40889685-40889704 None:intergenic 20.0%
!!! ATCTTTATTTTTTCTCGTTT+AGG - chr3_1:40889754-40889773 Msa0357550:intron 20.0%
!! TAACATTAATTCACGATATT+TGG + chr3_1:40889984-40890003 None:intergenic 20.0%
!! TTGCAACATTTATGAAATTA+AGG + chr3_1:40890046-40890065 None:intergenic 20.0%
!! TTAATTTCATAAATGTTGCA+AGG - chr3_1:40890045-40890064 Msa0357550:intron 20.0%
!!! AAACTAAATCTCTTTTCTAT+AGG - chr3_1:40890265-40890284 Msa0357550:intron 20.0%
!!! AACTAAATCTCTTTTCTATA+GGG - chr3_1:40890266-40890285 Msa0357550:intron 20.0%
!!! ATCTTTATTTTTTTCCGTTT+AGG + chr3_1:40890561-40890580 None:intergenic 20.0%
!! ACGGAAAAAAATAAAGATAA+AGG - chr3_1:40890563-40890582 Msa0357550:intron 20.0%
!! TATAGACAAGATTACATTAT+AGG + chr3_1:40890621-40890640 None:intergenic 20.0%
!! ATTCTAAATATGGGTAATTA+AGG - chr3_1:40890826-40890845 Msa0357550:intron 20.0%
!! GATATCAATCAAGTTAATAA+TGG + chr3_1:40891036-40891055 None:intergenic 20.0%
!! CATGAAAAATATTAGTTGAT+AGG + chr3_1:40891607-40891626 None:intergenic 20.0%
!! TGCAAAATGACATAAAAAAA+TGG + chr3_1:40892117-40892136 None:intergenic 20.0%
!! AATATAATGTTGAATTTGAG+TGG + chr3_1:40892239-40892258 None:intergenic 20.0%
!! TCAAATTCAACATTATATTG+AGG - chr3_1:40892240-40892259 Msa0357550:intron 20.0%
!! AGTTTGATTGTAAAATCAAT+TGG - chr3_1:40892310-40892329 Msa0357550:CDS 20.0%
!!! AAGGATTTTAATGAAATGTT+TGG - chr3_1:40892553-40892572 Msa0357550:intron 20.0%
!!! TTTTTCCCAAACTTTTTAAG+AGG + chr3_1:40877354-40877373 None:intergenic 25.0%
! ATCTTCAAAGAATGATAAGA+AGG + chr3_1:40877403-40877422 None:intergenic 25.0%
!! CAATCTAAGACAAGTAAATA+AGG + chr3_1:40877673-40877692 None:intergenic 25.0%
! GAAAGATATATATGATAGTC+AGG - chr3_1:40877813-40877832 Msa0357550:intron 25.0%
!! GACATAAATTAATGGATAGA+AGG + chr3_1:40877883-40877902 None:intergenic 25.0%
!! ATTGTCATTTCTATTAGACA+AGG - chr3_1:40877929-40877948 Msa0357550:intron 25.0%
!!! CTATATGTACCTTTTTGTTT+TGG + chr3_1:40878039-40878058 None:intergenic 25.0%
! GGTACATATAGCATTATTAT+AGG - chr3_1:40878048-40878067 Msa0357550:intron 25.0%
!! AAAAGGCTTAATTGTAGTTT+TGG - chr3_1:40878110-40878129 Msa0357550:intron 25.0%
!! TTTTCACCATTTTGTAGAAT+TGG - chr3_1:40878140-40878159 Msa0357550:intron 25.0%
!! TATCTGAAACAAATAAGGAT+TGG - chr3_1:40878562-40878581 Msa0357550:intron 25.0%
!! ATCTGAAACAAATAAGGATT+GGG - chr3_1:40878563-40878582 Msa0357550:intron 25.0%
! CAAGTAAGATGAAATTAAGA+CGG + chr3_1:40878742-40878761 None:intergenic 25.0%
!!! TAATCTTAGTCTTAACATCA+TGG - chr3_1:40879217-40879236 Msa0357550:intron 25.0%
! TTCATATTCATACTTGATCA+TGG - chr3_1:40879306-40879325 Msa0357550:intron 25.0%
! TGTTATAACTTACTTGTTCA+TGG - chr3_1:40879367-40879386 Msa0357550:intron 25.0%
! GTTATAACTTACTTGTTCAT+GGG - chr3_1:40879368-40879387 Msa0357550:intron 25.0%
! GAGATAATATGATAAGAATC+GGG + chr3_1:40879507-40879526 None:intergenic 25.0%
!!! ATACATGATTTGAGGTTTTT+GGG + chr3_1:40879849-40879868 None:intergenic 25.0%
!! TCATGTATCTCTAAGTATTT+TGG - chr3_1:40879861-40879880 Msa0357550:intron 25.0%
!! AATCTTGTGTAACTTTGTTT+GGG + chr3_1:40880062-40880081 None:intergenic 25.0%
!!! AAGATTTTGGAAAGAATTGT+TGG - chr3_1:40880481-40880500 Msa0357550:intron 25.0%
!! AGTGAGAAATGAAGATATTT+TGG - chr3_1:40880585-40880604 Msa0357550:intron 25.0%
! AGAGATATTTAGATCATTTG+GGG + chr3_1:40880611-40880630 None:intergenic 25.0%
! TCAGTAGAACTTTAAATTGA+AGG + chr3_1:40880897-40880916 None:intergenic 25.0%
! AAGGGATTATAGAATTATCA+AGG + chr3_1:40881028-40881047 None:intergenic 25.0%
!!! TAAGAGTATTTAAGTGCAAA+TGG + chr3_1:40881217-40881236 None:intergenic 25.0%
! ATTTCTAATCATTGGTACAT+AGG - chr3_1:40881386-40881405 Msa0357550:intron 25.0%
!!! CAACTTGTTTTAGTCAATTT+GGG + chr3_1:40881529-40881548 None:intergenic 25.0%
!! TGATTAAGGTAAAAGTATAC+AGG + chr3_1:40881901-40881920 None:intergenic 25.0%
!! TATACGGTCAATATTGATTA+AGG + chr3_1:40881915-40881934 None:intergenic 25.0%
! TCAAGAAGATATTAATGAGA+TGG + chr3_1:40882176-40882195 None:intergenic 25.0%
! ATGATAAGTTTGATCTTACA+AGG + chr3_1:40882256-40882275 None:intergenic 25.0%
! TTGATTAAGCAAAACATAGT+TGG + chr3_1:40882458-40882477 None:intergenic 25.0%
! AAATTTCGTAAATTAGCACA+TGG - chr3_1:40882512-40882531 Msa0357550:intron 25.0%
! AATTTCGTAAATTAGCACAT+GGG - chr3_1:40882513-40882532 Msa0357550:intron 25.0%
! TTAGGAATATATTCGCATAT+GGG + chr3_1:40882744-40882763 None:intergenic 25.0%
! TTTAGGAATATATTCGCATA+TGG + chr3_1:40882745-40882764 None:intergenic 25.0%
! GAGTTAATTAAGCAAAACAT+AGG - chr3_1:40882807-40882826 Msa0357550:intron 25.0%
! AATCATTAACGAAATCGATT+CGG + chr3_1:40883018-40883037 None:intergenic 25.0%
!! AGAGTTTGAAATATATGAGT+AGG + chr3_1:40883663-40883682 None:intergenic 25.0%
! ATTTCAAACTCTTTACTTAC+GGG - chr3_1:40883671-40883690 Msa0357550:intron 25.0%
!! TATCTGAAACAAATAAGGAT+TGG - chr3_1:40878562-40878581 Msa0357550:intron 25.0%
!! ATCTGAAACAAATAAGGATT+GGG - chr3_1:40878563-40878582 Msa0357550:intron 25.0%
! CAAGTAAGATGAAATTAAGA+CGG + chr3_1:40878742-40878761 None:intergenic 25.0%
! TTCATATTCATACTTGATCA+TGG - chr3_1:40879306-40879325 Msa0357550:intron 25.0%
! TGTTATAACTTACTTGTTCA+TGG - chr3_1:40879367-40879386 Msa0357550:intron 25.0%
! AGAGATAATACGATAAGAAT+CGG + chr3_1:40885290-40885309 None:intergenic 25.0%
!!! ATACATGATTTGAGGTTTTT+GGG + chr3_1:40879849-40879868 None:intergenic 25.0%
!! TCATGTATCTCTAAGTATTT+TGG - chr3_1:40879861-40879880 Msa0357550:intron 25.0%
!!! AAGATTTTGGAAAGAATTGT+TGG - chr3_1:40880481-40880500 Msa0357550:intron 25.0%
!! AGTGAGAAATGAAGATATTT+TGG - chr3_1:40880585-40880604 Msa0357550:intron 25.0%
!!! AAAAATAGCATTGGTTATGT+TGG + chr3_1:40886690-40886709 None:intergenic 25.0%
!! TATTCTCAACCGATATTTTT+AGG - chr3_1:40886798-40886817 Msa0357550:intron 25.0%
! TTTATCATATTTATTGGTGG+AGG + chr3_1:40886864-40886883 None:intergenic 25.0%
!!! TTTTTTTAATTCATAGTGGC+AGG - chr3_1:40886954-40886973 Msa0357550:intron 25.0%
!!! TTTTTTAATTCATAGTGGCA+GGG - chr3_1:40886955-40886974 Msa0357550:intron 25.0%
! AAAAGTTGAAATTGTAGCAA+TGG + chr3_1:40887197-40887216 None:intergenic 25.0%
!! TTTTTGAATTATGAGATGAG+AGG + chr3_1:40887516-40887535 None:intergenic 25.0%
!!! AGTATTGTTTTGAAAAGAAC+TGG + chr3_1:40887681-40887700 None:intergenic 25.0%
! CTACATTTCTTTGTATATCT+TGG + chr3_1:40887756-40887775 None:intergenic 25.0%
! CAAGATATACAAAGAAATGT+AGG - chr3_1:40887754-40887773 Msa0357550:intron 25.0%
!!! TTATTTTTAGCAATGTACTG+TGG + chr3_1:40888054-40888073 None:intergenic 25.0%
! ATAAGTCCTAAATTCTGTAA+TGG - chr3_1:40888070-40888089 Msa0357550:intron 25.0%
!! TTTTCTCCATTACAGAATTT+AGG + chr3_1:40888079-40888098 None:intergenic 25.0%
! TGTAATTCAAGCATCTTATA+GGG + chr3_1:40888451-40888470 None:intergenic 25.0%
! TTGTAATTCAAGCATCTTAT+AGG + chr3_1:40888452-40888471 None:intergenic 25.0%
! TACATCAAATTTCTTTCATC+TGG - chr3_1:40888897-40888916 Msa0357550:intron 25.0%
! GAATGTAAGTGATGAATTTA+AGG + chr3_1:40888927-40888946 None:intergenic 25.0%
! GAAACAAGAATTGATCAATA+GGG + chr3_1:40889027-40889046 None:intergenic 25.0%
! TGAAACAAGAATTGATCAAT+AGG + chr3_1:40889028-40889047 None:intergenic 25.0%
!! GTTAGCATATTTTATTAGGT+TGG + chr3_1:40889180-40889199 None:intergenic 25.0%
! AAGTCATCTGTTATACTTTA+AGG + chr3_1:40889347-40889366 None:intergenic 25.0%
! GAATGTAACCGATAAATTTA+AGG - chr3_1:40889578-40889597 Msa0357550:intron 25.0%
! CTGAATGTCCTTAAATTTAT+CGG + chr3_1:40889589-40889608 None:intergenic 25.0%
! AATTAAGGCAAGATTACATT+AGG - chr3_1:40889691-40889710 Msa0357550:intron 25.0%
! ATTAAGGCAAGATTACATTA+GGG - chr3_1:40889692-40889711 Msa0357550:intron 25.0%
! TGTGTTTAAAAGAAGATTTG+AGG + chr3_1:40890299-40890318 None:intergenic 25.0%
! TACAAAAGTTAAGATTGTTC+TGG - chr3_1:40890109-40890128 Msa0357550:intron 25.0%
! TGTGTTTAAAAGAAGATTTG+AGG - chr3_1:40890299-40890318 Msa0357550:intron 25.0%
!! TTTTTCTGATTCAATGAAGA+TGG - chr3_1:40890370-40890389 Msa0357550:intron 25.0%
!!! TGGTATTTTTGGATAAAGAT+AGG + chr3_1:40891140-40891159 None:intergenic 25.0%
! AAGGTTAGACAATGAATAAT+GGG + chr3_1:40891289-40891308 None:intergenic 25.0%
! AAAGGTTAGACAATGAATAA+TGG + chr3_1:40891290-40891309 None:intergenic 25.0%
! TTAATCGTAGTAATTACCTT+TGG + chr3_1:40891406-40891425 None:intergenic 25.0%
! TATACATAAACACTTATGCA+AGG + chr3_1:40891436-40891455 None:intergenic 25.0%
! TTGCATAAGTGTTTATGTAT+AGG - chr3_1:40891435-40891454 Msa0357550:intron 25.0%
! ATCAACTATAGTTAGTTGAT+AGG - chr3_1:40891554-40891573 Msa0357550:intron 25.0%
! TATATTGAGGTAATTTCAAG+TGG - chr3_1:40892253-40892272 Msa0357550:intron 25.0%
! TTATAGAAGCAGCAAAAAAA+TGG - chr3_1:40892347-40892366 Msa0357550:CDS 25.0%
! ATAAACATTGTTTGCTTCTT+TGG - chr3_1:40892505-40892524 Msa0357550:intron 25.0%
! TCTAAGTTATCCTATTATTG+AGG - chr3_1:40892606-40892625 Msa0357550:intron 25.0%
! CTAAGTTATCCTATTATTGA+GGG - chr3_1:40892607-40892626 Msa0357550:intron 25.0%
! TAAGTTATCCTATTATTGAG+GGG - chr3_1:40892608-40892627 Msa0357550:intron 25.0%
!!! TGAGAGGATAATCTTATTTT+TGG - chr3_1:40892745-40892764 Msa0357550:CDS 25.0%
TCAGTCCTTATCCATTATTA+GGG + chr3_1:40877082-40877101 None:intergenic 30.0%
ATCAGTCCTTATCCATTATT+AGG + chr3_1:40877083-40877102 None:intergenic 30.0%
GAAGATCATTAATGACGAAA+AGG - chr3_1:40877417-40877436 Msa0357550:CDS 30.0%
TTGTATCTATGAGGAACATA+TGG + chr3_1:40877481-40877500 None:intergenic 30.0%
TATGTTCCTCATAGATACAA+AGG - chr3_1:40877481-40877500 Msa0357550:CDS 30.0%
ATCAAATGTGATTACAGCTT+AGG - chr3_1:40877623-40877642 Msa0357550:intron 30.0%
TCAAATGTGATTACAGCTTA+GGG - chr3_1:40877624-40877643 Msa0357550:intron 30.0%
! AAAAAAGCACATGGATTGTT+TGG + chr3_1:40877725-40877744 None:intergenic 30.0%
CATATATATCTTTCTTGCTG+AGG + chr3_1:40877807-40877826 None:intergenic 30.0%
ATATATATGATAGTCAGGCT+AGG - chr3_1:40877818-40877837 Msa0357550:intron 30.0%
TTTGGAAGTCCAAAACAAAA+AGG - chr3_1:40878027-40878046 Msa0357550:intron 30.0%
! ACTTGTTAGGAAAGTTCAAA+AGG - chr3_1:40878093-40878112 Msa0357550:intron 30.0%
TAAGCCAAGACAAAATTAGT+AGG - chr3_1:40878210-40878229 Msa0357550:intron 30.0%
! GAAACCTACTAATTTTGTCT+TGG + chr3_1:40878217-40878236 None:intergenic 30.0%
!! TCACTTTTCATCAATTTCCA+AGG - chr3_1:40878278-40878297 Msa0357550:intron 30.0%
TTTCTAGATACGTCTAGTAT+GGG + chr3_1:40878318-40878337 None:intergenic 30.0%
TATTTGTTTCAGATATCAGG+TGG + chr3_1:40878557-40878576 None:intergenic 30.0%
! CCTTATTTGTTTCAGATATC+AGG + chr3_1:40878560-40878579 None:intergenic 30.0%
! CCTGATATCTGAAACAAATA+AGG - chr3_1:40878557-40878576 Msa0357550:intron 30.0%
TACTATAATCTTGTGTGTCA+TGG - chr3_1:40878771-40878790 Msa0357550:intron 30.0%
ATATTCATACTTGATCATGG+TGG - chr3_1:40879309-40879328 Msa0357550:intron 30.0%
AGATTAACTAATCATTCCTC+AGG - chr3_1:40879334-40879353 Msa0357550:intron 30.0%
ATAACAAACATGTTAACCTG+AGG + chr3_1:40879353-40879372 None:intergenic 30.0%
!!! ACATTTTAAAACCTATGCCT+TGG - chr3_1:40879579-40879598 Msa0357550:intron 30.0%
!! GATACATGATTTGAGGTTTT+TGG + chr3_1:40879850-40879869 None:intergenic 30.0%
ACTTAGAGATACATGATTTG+AGG + chr3_1:40879857-40879876 None:intergenic 30.0%
AAATCATAACACAAACCCAA+AGG - chr3_1:40880010-40880029 Msa0357550:intron 30.0%
GAATCTTGTGTAACTTTGTT+TGG + chr3_1:40880063-40880082 None:intergenic 30.0%
AGAAAGAATAGCAAGTTTGA+AGG + chr3_1:40880142-40880161 None:intergenic 30.0%
TTCTTCATAGTCAAGAACTA+TGG + chr3_1:40880178-40880197 None:intergenic 30.0%
TGAATTCATCTTGAGGTTTA+GGG + chr3_1:40880241-40880260 None:intergenic 30.0%
ATGAATTCATCTTGAGGTTT+AGG + chr3_1:40880242-40880261 None:intergenic 30.0%
ATGAAGATGAATTCATCTTG+AGG + chr3_1:40880248-40880267 None:intergenic 30.0%
TCAAGATGAATTCATCTTCA+TGG - chr3_1:40880247-40880266 Msa0357550:intron 30.0%
! TTGGGCATATTTTATGGAAT+TGG + chr3_1:40880292-40880311 None:intergenic 30.0%
ATGAAGAGATTCAAAAGTTG+GGG + chr3_1:40880367-40880386 None:intergenic 30.0%
CATGAAGAGATTCAAAAGTT+GGG + chr3_1:40880368-40880387 None:intergenic 30.0%
TCATGAAGAGATTCAAAAGT+TGG + chr3_1:40880369-40880388 None:intergenic 30.0%
! CTTTTGAATCTCTTCATGAA+AGG - chr3_1:40880370-40880389 Msa0357550:intron 30.0%
!! TTTTTGATTATGTCTCCTCA+AGG + chr3_1:40880444-40880463 None:intergenic 30.0%
ATTAAACACGCTTAACAGAA+GGG + chr3_1:40880656-40880675 None:intergenic 30.0%
CAGACGATTAATATTTCGAA+AGG + chr3_1:40880741-40880760 None:intergenic 30.0%
!! AGGATGAAATTCTTTTAAGG+GGG + chr3_1:40880817-40880836 None:intergenic 30.0%
! GAGGATGAAATTCTTTTAAG+GGG + chr3_1:40880818-40880837 None:intergenic 30.0%
! CGAGGATGAAATTCTTTTAA+GGG + chr3_1:40880819-40880838 None:intergenic 30.0%
! TCGAGGATGAAATTCTTTTA+AGG + chr3_1:40880820-40880839 None:intergenic 30.0%
GAGATAAAACTCGTATTCTT+TGG - chr3_1:40880866-40880885 Msa0357550:intron 30.0%
TGCAGACATTATCTTTCTTA+AGG - chr3_1:40880966-40880985 Msa0357550:intron 30.0%
AGGTAAGTTACATAAGTAAG+AGG + chr3_1:40881008-40881027 None:intergenic 30.0%
GGTTTCTTAAGACTCAAAAA+GGG + chr3_1:40881046-40881065 None:intergenic 30.0%
AGGTTTCTTAAGACTCAAAA+AGG + chr3_1:40881047-40881066 None:intergenic 30.0%
TTCTCCAAGATAAGATATGT+GGG + chr3_1:40881113-40881132 None:intergenic 30.0%
CTAATATCATACGAGATACA+CGG + chr3_1:40881248-40881267 None:intergenic 30.0%
! TATGGAGATGTGATTTTAAG+AGG + chr3_1:40881293-40881312 None:intergenic 30.0%
CGATATTAACTAACAAGAAG+CGG + chr3_1:40881337-40881356 None:intergenic 30.0%
AAATATAGAAACTCGTCTTG+CGG + chr3_1:40881485-40881504 None:intergenic 30.0%
!!! CCAACTTGTTTTAGTCAATT+TGG + chr3_1:40881530-40881549 None:intergenic 30.0%
CCAAATTGACTAAAACAAGT+TGG - chr3_1:40881527-40881546 Msa0357550:intron 30.0%
TTAACAAGTTTGGTATAGGA+GGG - chr3_1:40881710-40881729 Msa0357550:intron 30.0%
AGTTTCCACAATGAAGTAAT+CGG + chr3_1:40881843-40881862 None:intergenic 30.0%
TCTTTCTCGTCTTACTTAAA+TGG - chr3_1:40881867-40881886 Msa0357550:intron 30.0%
AGTAAGGATTGATGCTTATA+CGG + chr3_1:40881931-40881950 None:intergenic 30.0%
AGTTCTCAGTATGATAAGTA+AGG + chr3_1:40881947-40881966 None:intergenic 30.0%
GTCTCAACATATTAGGATAT+TGG + chr3_1:40882129-40882148 None:intergenic 30.0%
TACTCATGATACTTTACTTG+AGG - chr3_1:40882277-40882296 Msa0357550:intron 30.0%
AAGTATGTTACGTATACATC+AGG + chr3_1:40882337-40882356 None:intergenic 30.0%
GATACAAGGTTAGATACTTA+AGG + chr3_1:40882423-40882442 None:intergenic 30.0%
AAGTATCTAACCTTGTATCT+CGG - chr3_1:40882424-40882443 Msa0357550:intron 30.0%
!!! CTCGTTAGTTTTTCTTTCTA+AGG - chr3_1:40882489-40882508 Msa0357550:intron 30.0%
!! ATGATTTTAGAGAAACGACT+GGG + chr3_1:40882592-40882611 None:intergenic 30.0%
!! TATGATTTTAGAGAAACGAC+TGG + chr3_1:40882593-40882612 None:intergenic 30.0%
TAGGAATATATTCGCATATG+GGG + chr3_1:40882743-40882762 None:intergenic 30.0%
!! AAGAGTTTTATGAGATCACA+AGG + chr3_1:40882869-40882888 None:intergenic 30.0%
ACATGAAGTAAGAAGTTAAG+TGG + chr3_1:40882894-40882913 None:intergenic 30.0%
! ATTCGGTTTAAGGTAACTTA+GGG + chr3_1:40883001-40883020 None:intergenic 30.0%
!!! CTAAGGTTTTGAAAGGAAAA+AGG + chr3_1:40883048-40883067 None:intergenic 30.0%
!!! TCACATTCTAAGGTTTTGAA+AGG + chr3_1:40883055-40883074 None:intergenic 30.0%
AAATTGTCAATTCGTCTCTA+GGG + chr3_1:40883158-40883177 None:intergenic 30.0%
AAAATTGTCAATTCGTCTCT+AGG + chr3_1:40883159-40883178 None:intergenic 30.0%
! AGAGACGAATTGACAATTTT+CGG - chr3_1:40883159-40883178 Msa0357550:intron 30.0%
TAAGGAGAAGTCTATATATG+TGG + chr3_1:40883553-40883572 None:intergenic 30.0%
TAAACTCAGAAGTAAGAACT+CGG + chr3_1:40883841-40883860 None:intergenic 30.0%
TTAGCAATCGATGATTAGAA+CGG + chr3_1:40883926-40883945 None:intergenic 30.0%
!! ATTGCTAAATTGAGTTGATC+AGG - chr3_1:40883938-40883957 Msa0357550:intron 30.0%
TAAGTTACAACAAAGGTAGT+GGG + chr3_1:40884010-40884029 None:intergenic 30.0%
TTAAGTTACAACAAAGGTAG+TGG + chr3_1:40884011-40884030 None:intergenic 30.0%
TTTCTAGATACGTCTAGTAT+GGG + chr3_1:40878318-40878337 None:intergenic 30.0%
CATGTGCATTAATTCAATAC+TGG - chr3_1:40884110-40884129 Msa0357550:intron 30.0%
TATTTGTTTCAGATATCAGG+TGG + chr3_1:40878557-40878576 None:intergenic 30.0%
! CCTTATTTGTTTCAGATATC+AGG + chr3_1:40878560-40878579 None:intergenic 30.0%
! CCTGATATCTGAAACAAATA+AGG - chr3_1:40878557-40878576 Msa0357550:intron 30.0%
TACTATAATCTTGTGTGTCA+TGG - chr3_1:40878771-40878790 Msa0357550:intron 30.0%
ATATTCATACTTGATCATGG+TGG - chr3_1:40879309-40879328 Msa0357550:intron 30.0%
AGATTAACTAATCATTCCTC+AGG - chr3_1:40879334-40879353 Msa0357550:intron 30.0%
ATAACAAACATGTTAACCTG+AGG + chr3_1:40879353-40879372 None:intergenic 30.0%
GAGATAATACGATAAGAATC+GGG + chr3_1:40885289-40885308 None:intergenic 30.0%
!!! ACATTTTAAAACCTATGCCT+TGG - chr3_1:40879579-40879598 Msa0357550:intron 30.0%
!! GATACATGATTTGAGGTTTT+TGG + chr3_1:40879850-40879869 None:intergenic 30.0%
ACTTAGAGATACATGATTTG+AGG + chr3_1:40879857-40879876 None:intergenic 30.0%
! AATCTTGTGCAACTTTGTTT+GGG + chr3_1:40885887-40885906 None:intergenic 30.0%
AGAAAGAATAGCAAGTTTGA+AGG + chr3_1:40880142-40880161 None:intergenic 30.0%
TTCTTCATAGTCAAGAACTA+TGG + chr3_1:40880178-40880197 None:intergenic 30.0%
TGAATTCATCTTGAGGTTTA+GGG + chr3_1:40880241-40880260 None:intergenic 30.0%
ATGAATTCATCTTGAGGTTT+AGG + chr3_1:40880242-40880261 None:intergenic 30.0%
ATGAAGATGAATTCATCTTG+AGG + chr3_1:40880248-40880267 None:intergenic 30.0%
TCAAGATGAATTCATCTTCA+TGG - chr3_1:40880247-40880266 Msa0357550:intron 30.0%
! TTGGGCATATTTTATGGAAT+TGG + chr3_1:40880292-40880311 None:intergenic 30.0%
ATGAAGAGATTCAAAAGTTG+GGG + chr3_1:40880367-40880386 None:intergenic 30.0%
CATGAAGAGATTCAAAAGTT+GGG + chr3_1:40880368-40880387 None:intergenic 30.0%
TCATGAAGAGATTCAAAAGT+TGG + chr3_1:40880369-40880388 None:intergenic 30.0%
! CTTTTGAATCTCTTCATGAA+AGG - chr3_1:40880370-40880389 Msa0357550:intron 30.0%
! TAAGCTAAAGGAAGTTTGTT+TGG + chr3_1:40886241-40886260 None:intergenic 30.0%
!! TTTTTGATTATGTCTCCTCA+AGG + chr3_1:40880444-40880463 None:intergenic 30.0%
ATTAAACACGCTTAACACAA+GGG + chr3_1:40886481-40886500 None:intergenic 30.0%
TATTTCGAAAGGAAGTTTGA+CGG + chr3_1:40886555-40886574 None:intergenic 30.0%
CAGACGATTAATATTTCGAA+AGG + chr3_1:40880741-40880760 None:intergenic 30.0%
AACGAGTGTCCTAAAAATAT+CGG + chr3_1:40886810-40886829 None:intergenic 30.0%
!! TTTTTAATTCATAGTGGCAG+GGG - chr3_1:40886956-40886975 Msa0357550:intron 30.0%
TTTAATCAGTCAATGAACGT+TGG + chr3_1:40887366-40887385 None:intergenic 30.0%
CCATTCAAACAAACTTTCAT+TGG + chr3_1:40887416-40887435 None:intergenic 30.0%
! CCAATGAAAGTTTGTTTGAA+TGG - chr3_1:40887413-40887432 Msa0357550:intron 30.0%
ATTTGAATTCACACCTTATG+AGG + chr3_1:40887456-40887475 None:intergenic 30.0%
ATCTTGGTTATCCCATAAAA+TGG + chr3_1:40887740-40887759 None:intergenic 30.0%
!!! TATTTTAACATAAGAGGGGA+GGG + chr3_1:40888388-40888407 None:intergenic 30.0%
!!! ATATTTTAACATAAGAGGGG+AGG + chr3_1:40888389-40888408 None:intergenic 30.0%
! GCGTGTTAGCATATTTTATT+AGG + chr3_1:40889184-40889203 None:intergenic 30.0%
TTGTTTGGACTTAAAAGCTT+TGG + chr3_1:40889228-40889247 None:intergenic 30.0%
!!! GAGTTTGCTAGCATTTTTTT+CGG + chr3_1:40889290-40889309 None:intergenic 30.0%
! TTGATTTTTCTTGGTTGTGA+GGG + chr3_1:40889391-40889410 None:intergenic 30.0%
!! TTTGATTTTTCTTGGTTGTG+AGG + chr3_1:40889392-40889411 None:intergenic 30.0%
CTCACGAAAATTGAAAAATG+CGG - chr3_1:40889504-40889523 Msa0357550:intron 30.0%
TTAAGGCAAGATTACATTAG+GGG - chr3_1:40889693-40889712 Msa0357550:intron 30.0%
!! TGTGCTTTTAAGAGAGATAA+AGG + chr3_1:40889781-40889800 None:intergenic 30.0%
GAACATCTTCATCATATTTC+TGG + chr3_1:40890424-40890443 None:intergenic 30.0%
AGAAGATGATGAAGATTCAA+AGG + chr3_1:40889928-40889947 None:intergenic 30.0%
ATTTCATAAATGTTGCAAGG+CGG - chr3_1:40890048-40890067 Msa0357550:intron 30.0%
TCTAACTCAATATTCCAACA+CGG + chr3_1:40890188-40890207 None:intergenic 30.0%
GAACATCTTCATCATATTTC+TGG - chr3_1:40890424-40890443 Msa0357550:intron 30.0%
TGAGAGATAAAAGACCTAAA+CGG - chr3_1:40890544-40890563 Msa0357550:intron 30.0%
AAATACCCTCTAAACAAGAT+AGG - chr3_1:40890773-40890792 Msa0357550:intron 30.0%
AATACCCTCTAAACAAGATA+GGG - chr3_1:40890774-40890793 Msa0357550:intron 30.0%
! ATTACCCTATCTTGTTTAGA+GGG + chr3_1:40890781-40890800 None:intergenic 30.0%
AATATGGGTAATTAAGGATC+AGG - chr3_1:40890832-40890851 Msa0357550:intron 30.0%
! TTAACTTGATTGATATCCAC+AGG - chr3_1:40891039-40891058 Msa0357550:intron 30.0%
! CCTAAGAAACATGGTATTTT+TGG + chr3_1:40891151-40891170 None:intergenic 30.0%
CCAAAAATACCATGTTTCTT+AGG - chr3_1:40891148-40891167 Msa0357550:intron 30.0%
AAATATAGCCCATTCACTTA+CGG - chr3_1:40891250-40891269 Msa0357550:intron 30.0%
TGTGTAGGCAATAGTATATT+GGG + chr3_1:40891332-40891351 None:intergenic 30.0%
AATGATTCCATATAGTGTGT+AGG + chr3_1:40891347-40891366 None:intergenic 30.0%
AGGAATTTCTGTATTTCCAA+AGG - chr3_1:40891387-40891406 Msa0357550:intron 30.0%
!! TTTTAGAGATGCAACTCAAA+AGG + chr3_1:40891676-40891695 None:intergenic 30.0%
GAAACAACTTATGTTACAAG+TGG - chr3_1:40891996-40892015 Msa0357550:CDS 30.0%
ACTGTAAACACTATAAACCA+AGG + chr3_1:40892205-40892224 None:intergenic 30.0%
AAGCAGCAAAAAAATGGTTT+GGG - chr3_1:40892353-40892372 Msa0357550:intron 30.0%
!! CAGGGTAAGTTTAATTTTGA+AGG - chr3_1:40892442-40892461 Msa0357550:intron 30.0%
ATTATGAGCAACACAATCAA+TGG + chr3_1:40892487-40892506 None:intergenic 30.0%
CTTATAATCCCCTCAATAAT+AGG + chr3_1:40892619-40892638 None:intergenic 30.0%
GATTATAAGTATGAAACGCA+AGG - chr3_1:40892630-40892649 Msa0357550:intron 30.0%
! TAAGCTTAGATGATTTTGAG+AGG - chr3_1:40892729-40892748 Msa0357550:CDS 30.0%
! TATTGAGGTACCCCTAATAA+TGG - chr3_1:40877068-40877087 Msa0357550:three_prime_UTR 35.0%
CAGTCCTTATCCATTATTAG+GGG + chr3_1:40877081-40877100 None:intergenic 35.0%
TGTGTAAACTAGCGAAAAGA+AGG - chr3_1:40877229-40877248 Msa0357550:CDS 35.0%
GTGTAAACTAGCGAAAAGAA+GGG - chr3_1:40877230-40877249 Msa0357550:CDS 35.0%
AATAAAAAGAGCGGAAAGAC+GGG + chr3_1:40877266-40877285 None:intergenic 35.0%
CAATAAAAAGAGCGGAAAGA+CGG + chr3_1:40877267-40877286 None:intergenic 35.0%
! AGGATCAAGAAAAAAGCACA+TGG + chr3_1:40877734-40877753 None:intergenic 35.0%
TTGGACAAAAGCAAGATCTT+TGG + chr3_1:40877764-40877783 None:intergenic 35.0%
GTCATTTCTATTAGACAAGG+TGG - chr3_1:40877932-40877951 Msa0357550:intron 35.0%
TTCTATTAGACAAGGTGGAA+AGG - chr3_1:40877937-40877956 Msa0357550:intron 35.0%
!! AAAGGAATGGATGGATTAAG+AGG - chr3_1:40877955-40877974 Msa0357550:intron 35.0%
! AGTAGAAGTGCATTACTCTT+TGG - chr3_1:40878009-40878028 Msa0357550:intron 35.0%
ATAAGTGTCCAACACTTGTT+AGG - chr3_1:40878080-40878099 Msa0357550:intron 35.0%
TGAACTTTCCTAACAAGTGT+TGG + chr3_1:40878091-40878110 None:intergenic 35.0%
CTACAAAATGGTGAAAACAG+AGG + chr3_1:40878137-40878156 None:intergenic 35.0%
! GGGTGTTACAAATATTACCT+TGG + chr3_1:40878298-40878317 None:intergenic 35.0%
CTTTCTAGATACGTCTAGTA+TGG + chr3_1:40878319-40878338 None:intergenic 35.0%
CATGTGCATTAATTCAGTAC+TGG - chr3_1:40878344-40878363 Msa0357550:intron 35.0%
! TGGATGATGTGGATTTTTCA+AGG + chr3_1:40878477-40878496 None:intergenic 35.0%
TGCCTATAGCTTAGGATTTA+GGG + chr3_1:40878615-40878634 None:intergenic 35.0%
TTGCCTATAGCTTAGGATTT+AGG + chr3_1:40878616-40878635 None:intergenic 35.0%
TATAATCTTGTGTGTCATGG+CGG - chr3_1:40878774-40878793 Msa0357550:intron 35.0%
! ATTCATTTTATGGAGAGTCC+CGG - chr3_1:40879030-40879049 Msa0357550:intron 35.0%
CTAAGATTATAACCGCATGT+CGG + chr3_1:40879206-40879225 None:intergenic 35.0%
!! GGTAAGCTTTAAGCATGATT+AGG + chr3_1:40879252-40879271 None:intergenic 35.0%
TATGAACACTTACCGCTAAT+CGG + chr3_1:40879292-40879311 None:intergenic 35.0%
!!! TCTAGTTTTTCCCTTGCTTA+AGG - chr3_1:40879469-40879488 Msa0357550:intron 35.0%
GCAAGATAATCCTTAAGCAA+GGG + chr3_1:40879482-40879501 None:intergenic 35.0%
AGCAAGATAATCCTTAAGCA+AGG + chr3_1:40879483-40879502 None:intergenic 35.0%
TTGGCAAGTATAGTAAAGCA+TGG + chr3_1:40879537-40879556 None:intergenic 35.0%
CTTGAGAGTAAGCAAGTATT+TGG + chr3_1:40879556-40879575 None:intergenic 35.0%
ACTCTTGTAAAACGTCCATA+AGG - chr3_1:40879902-40879921 Msa0357550:intron 35.0%
ATAACACAAACCCAAAGGTA+AGG - chr3_1:40880015-40880034 Msa0357550:intron 35.0%
GCTAGTATTTCCTTACCTTT+GGG + chr3_1:40880028-40880047 None:intergenic 35.0%
AGCTAGTATTTCCTTACCTT+TGG + chr3_1:40880029-40880048 None:intergenic 35.0%
AGGTAAGGAAATACTAGCTA+TGG - chr3_1:40880030-40880049 Msa0357550:intron 35.0%
AAGCAATTAACCAAGAGCTA+GGG + chr3_1:40880106-40880125 None:intergenic 35.0%
AAAGCAATTAACCAAGAGCT+AGG + chr3_1:40880107-40880126 None:intergenic 35.0%
TCGAAAGATGTTTCAAGCTA+GGG + chr3_1:40880202-40880221 None:intergenic 35.0%
! CTTGTGTTGGGCATATTTTA+TGG + chr3_1:40880298-40880317 None:intergenic 35.0%
AAGGCTTTGCATTGTTGATA+TGG + chr3_1:40880323-40880342 None:intergenic 35.0%
ATATCAACAATGCAAAGCCT+TGG - chr3_1:40880322-40880341 Msa0357550:intron 35.0%
TGGATTTGAATAAGAAGCCA+AGG + chr3_1:40880342-40880361 None:intergenic 35.0%
! TAAGCTAAAGGAAGCTTGTT+TGG + chr3_1:40880416-40880435 None:intergenic 35.0%
AATCAAAAAGCTTGCCATGA+AGG - chr3_1:40880455-40880474 Msa0357550:intron 35.0%
TCCAAAATCTTCTTCCTTCA+TGG + chr3_1:40880472-40880491 None:intergenic 35.0%
TTTGGAAAGAATTGTTGGAG+AGG - chr3_1:40880486-40880505 Msa0357550:intron 35.0%
AAGAATTGTTGGAGAGGAAT+AGG - chr3_1:40880492-40880511 Msa0357550:intron 35.0%
AGAATTGTTGGAGAGGAATA+GGG - chr3_1:40880493-40880512 Msa0357550:intron 35.0%
CACTTGTCTTTCTATCTCTA+GGG + chr3_1:40880569-40880588 None:intergenic 35.0%
TCACTTGTCTTTCTATCTCT+AGG + chr3_1:40880570-40880589 None:intergenic 35.0%
GATTAAACACGCTTAACAGA+AGG + chr3_1:40880657-40880676 None:intergenic 35.0%
TACGAGTTAAGTATCAGAGT+TGG + chr3_1:40880679-40880698 None:intergenic 35.0%
! TATTTCGAAAGGAAGTGTGA+CGG + chr3_1:40880730-40880749 None:intergenic 35.0%
GGTAATATTCTGATACTGAC+AGG - chr3_1:40880773-40880792 Msa0357550:intron 35.0%
AATATTCTGATACTGACAGG+CGG - chr3_1:40880776-40880795 Msa0357550:intron 35.0%
!! GGATGAAATTCTTTTAAGGG+GGG + chr3_1:40880816-40880835 None:intergenic 35.0%
TAGATGGTTTCTGAATTTCG+AGG + chr3_1:40880837-40880856 None:intergenic 35.0%
TTATCTCAGAGATTGGTAGA+TGG + chr3_1:40880853-40880872 None:intergenic 35.0%
!! ACGAGTTTTATCTCAGAGAT+TGG + chr3_1:40880860-40880879 None:intergenic 35.0%
GAGATTGTGAAGAGATAGAA+AGG + chr3_1:40881067-40881086 None:intergenic 35.0%
GTAACCCACATATCTTATCT+TGG - chr3_1:40881106-40881125 Msa0357550:intron 35.0%
CTTCTCCAAGATAAGATATG+TGG + chr3_1:40881114-40881133 None:intergenic 35.0%
TATTTAAGTGCAAATGGACG+TGG + chr3_1:40881211-40881230 None:intergenic 35.0%
! TTGGAAGTATGCAAGTACTA+TGG + chr3_1:40881311-40881330 None:intergenic 35.0%
AACTAACAAGAAGCGGTATT+TGG + chr3_1:40881330-40881349 None:intergenic 35.0%
GTTAATATCGATACTCGTTC+TGG - chr3_1:40881347-40881366 Msa0357550:intron 35.0%
ATCATTGGTACATAGGTTCT+TGG - chr3_1:40881393-40881412 Msa0357550:intron 35.0%
!!! TCTCATTTTGAAACCAAGTC+TGG - chr3_1:40881444-40881463 Msa0357550:intron 35.0%
GTACATTGTTGAAACCAATG+AGG + chr3_1:40881599-40881618 None:intergenic 35.0%
TCGTTACCACTTAACAAGTT+TGG - chr3_1:40881700-40881719 Msa0357550:intron 35.0%
!! CCTATACCAAACTTGTTAAG+TGG + chr3_1:40881709-40881728 None:intergenic 35.0%
CCACTTAACAAGTTTGGTAT+AGG - chr3_1:40881706-40881725 Msa0357550:intron 35.0%
CTTAACAAGTTTGGTATAGG+AGG - chr3_1:40881709-40881728 Msa0357550:intron 35.0%
AAGAGTAAGTGCTACGATTA+GGG + chr3_1:40881771-40881790 None:intergenic 35.0%
!! AGAAGAGCTTTTGATTAGTC+CGG + chr3_1:40881794-40881813 None:intergenic 35.0%
GTTTCCACAATGAAGTAATC+GGG + chr3_1:40881842-40881861 None:intergenic 35.0%
CTTATCATACTGAGAACTCA+TGG - chr3_1:40881949-40881968 Msa0357550:intron 35.0%
AAAGTTGTGAACAGTAACCA+TGG + chr3_1:40882057-40882076 None:intergenic 35.0%
TTCACTCGTCTCAACATATT+AGG + chr3_1:40882136-40882155 None:intergenic 35.0%
!! ACAAGGCATTGGTAAATGTA+AGG + chr3_1:40882239-40882258 None:intergenic 35.0%
AGTTTGATCTTACAAGGCAT+TGG + chr3_1:40882250-40882269 None:intergenic 35.0%
! GATAAACCTTACGTTTTTGC+TGG - chr3_1:40882299-40882318 Msa0357550:intron 35.0%
CATGGGAATATGAGATTACT+AGG + chr3_1:40882370-40882389 None:intergenic 35.0%
CAAGGTTAGATACTTAAGGA+AGG + chr3_1:40882419-40882438 None:intergenic 35.0%
AAAAACTAACGAGCAAGCAT+AGG + chr3_1:40882482-40882501 None:intergenic 35.0%
!! TGATTTTAGAGAAACGACTG+GGG + chr3_1:40882591-40882610 None:intergenic 35.0%
AGGAATATATTCGCATATGG+GGG + chr3_1:40882742-40882761 None:intergenic 35.0%
TTAAGCAAAACATAGGTTCG+AGG - chr3_1:40882814-40882833 Msa0357550:intron 35.0%
TAAGCAAAACATAGGTTCGA+GGG - chr3_1:40882815-40882834 Msa0357550:intron 35.0%
TTATGAGATCACAAGGTTCT+TGG + chr3_1:40882862-40882881 None:intergenic 35.0%
AGTTTAGACCAAGAGATTAG+AGG + chr3_1:40882952-40882971 None:intergenic 35.0%
TAATGTGGCAAGAGTTAAGA+AGG + chr3_1:40882975-40882994 None:intergenic 35.0%
GGTAACTTAGGGAATTAATG+TGG + chr3_1:40882990-40883009 None:intergenic 35.0%
! GATTCGGTTTAAGGTAACTT+AGG + chr3_1:40883002-40883021 None:intergenic 35.0%
!! AACGAAATCGATTCGGTTTA+AGG + chr3_1:40883011-40883030 None:intergenic 35.0%
CGAATGCATATCACATTCTA+AGG + chr3_1:40883065-40883084 None:intergenic 35.0%
TAGGGTCTGTGGTAATTATT+GGG + chr3_1:40883140-40883159 None:intergenic 35.0%
AGTTTCTTCAGCTCAATTTC+TGG - chr3_1:40883219-40883238 Msa0357550:intron 35.0%
AATATTCTATCACCTATGCC+TGG - chr3_1:40883299-40883318 Msa0357550:intron 35.0%
AAGCTAAGGATTTAAGTGGA+GGG + chr3_1:40883393-40883412 None:intergenic 35.0%
ATGAACTTGTATGTTCAGAG+TGG + chr3_1:40883485-40883504 None:intergenic 35.0%
GAGAAGTCTATATATGTGGA+CGG + chr3_1:40883549-40883568 None:intergenic 35.0%
AAATGCAAGGCTACAAGTTA+AGG + chr3_1:40883571-40883590 None:intergenic 35.0%
AATTCCAGAGTGTAAATGCA+AGG + chr3_1:40883584-40883603 None:intergenic 35.0%
AGTAAGAGTCATTGTTGGAA+CGG + chr3_1:40883628-40883647 None:intergenic 35.0%
GCTTTAGTAAGAGTCATTGT+TGG + chr3_1:40883633-40883652 None:intergenic 35.0%
AGGTAAGACAATGCTAAGAA+GGG + chr3_1:40883740-40883759 None:intergenic 35.0%
AAGGTAAGACAATGCTAAGA+AGG + chr3_1:40883741-40883760 None:intergenic 35.0%
AAGTATGAGATGAAGAAGCA+CGG + chr3_1:40883869-40883888 None:intergenic 35.0%
CAACAACTAGAACATTTACC+CGG - chr3_1:40883973-40883992 Msa0357550:intron 35.0%
GGGTCATTAAGTTACAACAA+AGG + chr3_1:40884017-40884036 None:intergenic 35.0%
TGTTGTAACTTAATGACCCA+AGG - chr3_1:40884018-40884037 Msa0357550:intron 35.0%
TTACAATTTGGTATCAGAGC+AGG + chr3_1:40884059-40884078 None:intergenic 35.0%
! CTAGTATGGGTGTTACAATT+TGG + chr3_1:40884071-40884090 None:intergenic 35.0%
CTTTCTAGATACGTCTAGTA+TGG + chr3_1:40878319-40878338 None:intergenic 35.0%
! TGGATGATGTGGATTTTTCA+AGG + chr3_1:40878477-40878496 None:intergenic 35.0%
TGCCTATAGCTTAGGATTTA+GGG + chr3_1:40878615-40878634 None:intergenic 35.0%
TTGCCTATAGCTTAGGATTT+AGG + chr3_1:40878616-40878635 None:intergenic 35.0%
TATAATCTTGTGTGTCATGG+CGG - chr3_1:40878774-40878793 Msa0357550:intron 35.0%
! ATTCATTTTATGGAGAGTCC+CGG - chr3_1:40879030-40879049 Msa0357550:intron 35.0%
!! GGTAAGCTTTAAGCATGATT+AGG + chr3_1:40879252-40879271 None:intergenic 35.0%
TATGAACACTTACCGCTAAT+CGG + chr3_1:40879292-40879311 None:intergenic 35.0%
!!! TCTAGTTTTTCCCTTGCTTA+AGG - chr3_1:40879469-40879488 Msa0357550:intron 35.0%
GCAAGATAATCCTTAAGCAA+GGG + chr3_1:40879482-40879501 None:intergenic 35.0%
AGCAAGATAATCCTTAAGCA+AGG + chr3_1:40879483-40879502 None:intergenic 35.0%
CTTGAGAGTAAGCTAGTATT+TGG + chr3_1:40885338-40885357 None:intergenic 35.0%
ACTCTTGTAAAACGTCCATA+AGG - chr3_1:40879902-40879921 Msa0357550:intron 35.0%
ATAACACAAACCCAAACGTA+AGG - chr3_1:40885840-40885859 Msa0357550:intron 35.0%
GCTAGTATTTCCTTACGTTT+GGG + chr3_1:40885853-40885872 None:intergenic 35.0%
AGCTAGTATTTCCTTACGTT+TGG + chr3_1:40885854-40885873 None:intergenic 35.0%
ACGTAAGGAAATACTAGCTA+TGG - chr3_1:40885855-40885874 Msa0357550:intron 35.0%
GAATCTTGTGCAACTTTGTT+TGG + chr3_1:40885888-40885907 None:intergenic 35.0%
AAGCAATTAACCAAGAGCTA+GGG + chr3_1:40880106-40880125 None:intergenic 35.0%
AAAGCAATTAACCAAGAGCT+AGG + chr3_1:40880107-40880126 None:intergenic 35.0%
TTGGAAGATGTTTCAAGCTA+GGG + chr3_1:40886027-40886046 None:intergenic 35.0%
! CTTGTGTTGGGCATATTTTA+TGG + chr3_1:40880298-40880317 None:intergenic 35.0%
!! AAGGCTTTGGATTGTTGATT+TGG + chr3_1:40886148-40886167 None:intergenic 35.0%
AAATCAACAATCCAAAGCCT+TGG - chr3_1:40886147-40886166 Msa0357550:intron 35.0%
TGGATTTGAATAAGAAGCCA+AGG + chr3_1:40880342-40880361 None:intergenic 35.0%
AATCAAAAAGCTTGCCATGA+AGG - chr3_1:40880455-40880474 Msa0357550:intron 35.0%
TCCAAAATCTTCTTCCTTCA+TGG + chr3_1:40880472-40880491 None:intergenic 35.0%
TTTGGAAAGAATTGTTGGAG+AGG - chr3_1:40880486-40880505 Msa0357550:intron 35.0%
AAGAATTGTTGGAGAGGAAT+AGG - chr3_1:40880492-40880511 Msa0357550:intron 35.0%
AGAATTGTTGGAGAGGAATA+GGG - chr3_1:40880493-40880512 Msa0357550:intron 35.0%
GATTAAACACGCTTAACACA+AGG + chr3_1:40886482-40886501 None:intergenic 35.0%
TACGAGTTAAGTATCAGAGT+TGG + chr3_1:40880679-40880698 None:intergenic 35.0%
GTCTCTCAAAGGCAATATAA+TGG + chr3_1:40886917-40886936 None:intergenic 35.0%
!! CCAGTTTGTGTTACTTTCAT+AGG + chr3_1:40887126-40887145 None:intergenic 35.0%
CCTATGAAAGTAACACAAAC+TGG - chr3_1:40887123-40887142 Msa0357550:intron 35.0%
GATGTCAATCATACCTCATA+AGG - chr3_1:40887440-40887459 Msa0357550:intron 35.0%
! AGATGAGAGGTATGATTGAA+AGG + chr3_1:40887503-40887522 None:intergenic 35.0%
!! TGATTGGTTGATAACAAGAG+AGG + chr3_1:40888235-40888254 None:intergenic 35.0%
!! ATTTTAACATAAGAGGGGAG+GGG + chr3_1:40888387-40888406 None:intergenic 35.0%
!! ATGTTTTTGTTCTCACGTTC+GGG + chr3_1:40888974-40888993 None:intergenic 35.0%
!! GATGTTTTTGTTCTCACGTT+CGG + chr3_1:40888975-40888994 None:intergenic 35.0%
! AATTTGAAACTGCAGCAGTT+TGG + chr3_1:40889092-40889111 None:intergenic 35.0%
! GAGGCTTTTGTTCTTTTGTT+TGG + chr3_1:40889243-40889262 None:intergenic 35.0%
! ATACTTTAAGGATTGCTAGC+AGG + chr3_1:40889335-40889354 None:intergenic 35.0%
ACGGTAATTCTCACGATATT+TGG - chr3_1:40889459-40889478 Msa0357550:intron 35.0%
GAAGCTTCAAAGAAAGAAGA+TGG - chr3_1:40890394-40890413 Msa0357550:intron 35.0%
! TGATTGGTTGATATCATGAG+AGG - chr3_1:40890748-40890767 Msa0357550:intron 35.0%
! GATTGGTTGATATCATGAGA+GGG - chr3_1:40890749-40890768 Msa0357550:intron 35.0%
! GATTACCCTATCTTGTTTAG+AGG + chr3_1:40890782-40890801 None:intergenic 35.0%
AATATAGCCCATTCACTTAC+GGG - chr3_1:40891251-40891270 Msa0357550:intron 35.0%
TTGAAATCCCGTAAGTGAAT+GGG + chr3_1:40891261-40891280 None:intergenic 35.0%
GTGTGTAGGCAATAGTATAT+TGG + chr3_1:40891333-40891352 None:intergenic 35.0%
ACTATTGCCTACACACTATA+TGG - chr3_1:40891337-40891356 Msa0357550:intron 35.0%
! ATTGAGGTAATTTCAAGTGG+TGG - chr3_1:40892256-40892275 Msa0357550:intron 35.0%
GAAGCAGCAAAAAAATGGTT+TGG - chr3_1:40892352-40892371 Msa0357550:intron 35.0%
!! AAAATGGTTTGGGTTGAACA+AGG - chr3_1:40892363-40892382 Msa0357550:intron 35.0%
!! AAATGGTTTGGGTTGAACAA+GGG - chr3_1:40892364-40892383 Msa0357550:intron 35.0%
CAAAGCAGTTGACAAAGATA+AGG - chr3_1:40892405-40892424 Msa0357550:intron 35.0%
TAAGGTAAAGCAATATGAGC+AGG - chr3_1:40892423-40892442 Msa0357550:intron 35.0%
AAGGTAAAGCAATATGAGCA+GGG - chr3_1:40892424-40892443 Msa0357550:intron 35.0%
AACATTGTTTGCTTCTTTGG+TGG - chr3_1:40892508-40892527 Msa0357550:intron 35.0%
! TTTGCTTCTTTGGTGGTTTA+TGG - chr3_1:40892515-40892534 Msa0357550:intron 35.0%
GATAGCTAACGAGAAAAAGT+TGG + chr3_1:40892579-40892598 None:intergenic 35.0%
ATAAGTATGAAACGCAAGGT+TGG - chr3_1:40892634-40892653 Msa0357550:intron 35.0%
TAAGTATGAAACGCAAGGTT+GGG - chr3_1:40892635-40892654 Msa0357550:intron 35.0%
! ACGTACTCATATGCTTTTCA+TGG + chr3_1:40892676-40892695 None:intergenic 35.0%
ATCTTCGTGTGGTGAATGAT+AGG - chr3_1:40877037-40877056 Msa0357550:three_prime_UTR 40.0%
TGATAGGCCTTCTCTTATTG+AGG - chr3_1:40877053-40877072 Msa0357550:three_prime_UTR 40.0%
!! GGTACCCCTAATAATGGATA+AGG - chr3_1:40877074-40877093 Msa0357550:three_prime_UTR 40.0%
GTTCCTCATAGATACAAAGG+AGG - chr3_1:40877484-40877503 Msa0357550:CDS 40.0%
TGATTACAGCTTAGGGTTTC+AGG - chr3_1:40877631-40877650 Msa0357550:intron 40.0%
GATTACAGCTTAGGGTTTCA+GGG - chr3_1:40877632-40877651 Msa0357550:intron 40.0%
GACAAAAGCAAGATCTTTGG+AGG + chr3_1:40877761-40877780 None:intergenic 40.0%
TGTGGAACATTTGAGGGAAT+TGG + chr3_1:40877783-40877802 None:intergenic 40.0%
TGAGGTTGTGGAACATTTGA+GGG + chr3_1:40877789-40877808 None:intergenic 40.0%
TATCTTTCTTGCTGAGGTTG+TGG + chr3_1:40877801-40877820 None:intergenic 40.0%
! TCAGGCTAGGAATGCTTTTA+TGG - chr3_1:40877831-40877850 Msa0357550:intron 40.0%
TTAGACAAGGTGGAAAGGAA+TGG - chr3_1:40877942-40877961 Msa0357550:intron 40.0%
GGGAGACCAATTCTACAAAA+TGG + chr3_1:40878149-40878168 None:intergenic 40.0%
AAATCCACATCATCCAGCAT+CGG - chr3_1:40878481-40878500 Msa0357550:intron 40.0%
TCCCCTAAATCCTAAGCTAT+AGG - chr3_1:40878610-40878629 Msa0357550:CDS 40.0%
GCCTATAGCTTAGGATTTAG+GGG + chr3_1:40878614-40878633 None:intergenic 40.0%
TCCTAAGCTATAGGCAACAA+CGG - chr3_1:40878619-40878638 Msa0357550:CDS 40.0%
TATCTTGGCATAGTGGTCTT+AGG + chr3_1:40878809-40878828 None:intergenic 40.0%
AAGACCACTATGCCAAGATA+CGG - chr3_1:40878809-40878828 Msa0357550:intron 40.0%
TTTACCGTATCTTGGCATAG+TGG + chr3_1:40878816-40878835 None:intergenic 40.0%
TTCATGACACAATCCTAAGC+CGG - chr3_1:40878861-40878880 Msa0357550:intron 40.0%
! TTCATTTTATGGAGAGTCCC+GGG - chr3_1:40879031-40879050 Msa0357550:intron 40.0%
! TCATGATGGGATTGTACTCA+GGG + chr3_1:40879065-40879084 None:intergenic 40.0%
CTTCGCGACTTATCATTCTA+AGG - chr3_1:40879404-40879423 Msa0357550:intron 40.0%
CATAGTAGTCGAGAACTAGA+AGG + chr3_1:40879442-40879461 None:intergenic 40.0%
AAGACTGCTCGAAGAAAAAC+TGG - chr3_1:40879633-40879652 Msa0357550:intron 40.0%
AACGTCCATAAGGCAAGTAT+TGG - chr3_1:40879912-40879931 Msa0357550:intron 40.0%
ACTTGCCAATACTTGCCTTA+TGG + chr3_1:40879920-40879939 None:intergenic 40.0%
!! AAGGCAAGTATTGGCAAGTT+TGG - chr3_1:40879921-40879940 Msa0357550:intron 40.0%
ATTGGCAAGTTTGGTAAGCA+AGG - chr3_1:40879930-40879949 Msa0357550:intron 40.0%
TTGGTAAGCAAGGCAAGAAA+AGG - chr3_1:40879940-40879959 Msa0357550:intron 40.0%
TGGTAAGCAAGGCAAGAAAA+GGG - chr3_1:40879941-40879960 Msa0357550:intron 40.0%
! TTAACCAAGAGCTAGGGTTT+TGG + chr3_1:40880100-40880119 None:intergenic 40.0%
TAGTCAAGAACTATGGTGCT+TGG + chr3_1:40880171-40880190 None:intergenic 40.0%
GTCGAAAGATGTTTCAAGCT+AGG + chr3_1:40880203-40880222 None:intergenic 40.0%
GTTGATATGGAGCTTGTGTT+GGG + chr3_1:40880310-40880329 None:intergenic 40.0%
TGTTGATATGGAGCTTGTGT+TGG + chr3_1:40880311-40880330 None:intergenic 40.0%
GAGATTCAAAAGTTGGGGTT+TGG + chr3_1:40880362-40880381 None:intergenic 40.0%
CTCAAGGTCTCTTAAGCTAA+AGG + chr3_1:40880428-40880447 None:intergenic 40.0%
! CTTTAGCTTAAGAGACCTTG+AGG - chr3_1:40880426-40880445 Msa0357550:intron 40.0%
! GCCATGAAGGAAGAAGATTT+TGG - chr3_1:40880468-40880487 Msa0357550:intron 40.0%
ATATTCTGATACTGACAGGC+GGG - chr3_1:40880777-40880796 Msa0357550:intron 40.0%
AGTGCTACGATTAGGGAATA+AGG + chr3_1:40881764-40881783 None:intergenic 40.0%
GAAGAGTAAGTGCTACGATT+AGG + chr3_1:40881772-40881791 None:intergenic 40.0%
AATCGTAGCACTTACTCTTC+CGG - chr3_1:40881772-40881791 Msa0357550:intron 40.0%
TAACCATGGAACATGGAATC+TGG + chr3_1:40882043-40882062 None:intergenic 40.0%
TGAACAGTAACCATGGAACA+TGG + chr3_1:40882050-40882069 None:intergenic 40.0%
! AACCTTACGTTTTTGCTGGT+TGG - chr3_1:40882303-40882322 Msa0357550:intron 40.0%
!! ACCTTACGTTTTTGCTGGTT+GGG - chr3_1:40882304-40882323 Msa0357550:intron 40.0%
GACTAAACTCACTAGAACCA+AGG + chr3_1:40882648-40882667 None:intergenic 40.0%
AAGCAAAACATAGGTTCGAG+GGG - chr3_1:40882816-40882835 Msa0357550:intron 40.0%
TTCGTCACTCGATGTCATAA+AGG - chr3_1:40883081-40883100 Msa0357550:intron 40.0%
AGGGTCTGTGGTAATTATTG+GGG + chr3_1:40883139-40883158 None:intergenic 40.0%
CTAGGGTCTGTGGTAATTAT+TGG + chr3_1:40883141-40883160 None:intergenic 40.0%
TGGGAATGAATGATGTGCAT+TGG + chr3_1:40883270-40883289 None:intergenic 40.0%
!! GAATTAAGTTGATGCTTGCC+AGG + chr3_1:40883320-40883339 None:intergenic 40.0%
CAATACAATTCTCTGCACGT+CGG - chr3_1:40883339-40883358 Msa0357550:intron 40.0%
AAGTGGAGGGTTATGGTATT+AGG + chr3_1:40883380-40883399 None:intergenic 40.0%
AGGATTTAAGTGGAGGGTTA+TGG + chr3_1:40883387-40883406 None:intergenic 40.0%
GAAGCTAAGGATTTAAGTGG+AGG + chr3_1:40883394-40883413 None:intergenic 40.0%
GAGGAAGCTAAGGATTTAAG+TGG + chr3_1:40883397-40883416 None:intergenic 40.0%
TTGTATGTTCAGAGTGGACA+AGG + chr3_1:40883479-40883498 None:intergenic 40.0%
TATATGTGGACGGAGTTAGT+AGG + chr3_1:40883539-40883558 None:intergenic 40.0%
GTAAGAGTCATTGTTGGAAC+GGG + chr3_1:40883627-40883646 None:intergenic 40.0%
! GATGTATGAATCCTCTGAGA+AGG + chr3_1:40883760-40883779 None:intergenic 40.0%
CATCTACTTACTTAGTTCCC+CGG - chr3_1:40883776-40883795 Msa0357550:intron 40.0%
! AAGAAGATGATAGTGCCAGT+AGG + chr3_1:40883805-40883824 None:intergenic 40.0%
AAATCCACATCATCCAGCAT+CGG - chr3_1:40878481-40878500 Msa0357550:intron 40.0%
TCCCCTAAATCCTAAGCTAT+AGG - chr3_1:40878610-40878629 Msa0357550:CDS 40.0%
GCCTATAGCTTAGGATTTAG+GGG + chr3_1:40878614-40878633 None:intergenic 40.0%
TATCTTGGCATAGTGGTCTT+AGG + chr3_1:40878809-40878828 None:intergenic 40.0%
AAGACCACTATGCCAAGATA+CGG - chr3_1:40878809-40878828 Msa0357550:intron 40.0%
TTTACCGTATCTTGGCATAG+TGG + chr3_1:40878816-40878835 None:intergenic 40.0%
TTCATGACACAATCCTAAGC+AGG - chr3_1:40878861-40878880 Msa0357550:intron 40.0%
AATCCTAAGCAGGACGATTA+GGG - chr3_1:40884637-40884656 Msa0357550:intron 40.0%
! TTCATTTTATGGAGAGTCCC+GGG - chr3_1:40879031-40879050 Msa0357550:intron 40.0%
! TCTCTTGTTATCCATGTCAG+GGG + chr3_1:40884957-40884976 None:intergenic 40.0%
! GTCTCTTGTTATCCATGTCA+GGG + chr3_1:40884958-40884977 None:intergenic 40.0%
! TGTCTCTTGTTATCCATGTC+AGG + chr3_1:40884959-40884978 None:intergenic 40.0%
CTTCGCGACTTATCATTCTA+AGG - chr3_1:40879404-40879423 Msa0357550:intron 40.0%
CATAGTAGTCGAGAACTAGA+AGG + chr3_1:40879442-40879461 None:intergenic 40.0%
TTGGCAAGCATAGTAAAGCA+TGG + chr3_1:40885319-40885338 None:intergenic 40.0%
AAGACAGCTCGAAGAAAAAC+TGG - chr3_1:40885415-40885434 Msa0357550:intron 40.0%
AACGTCCATAAGGCAAGTAT+TGG - chr3_1:40879912-40879931 Msa0357550:intron 40.0%
ACTTGCCAATACTTGCCTTA+TGG + chr3_1:40879920-40879939 None:intergenic 40.0%
!! AAGGCAAGTATTGGCAAGTT+TGG - chr3_1:40879921-40879940 Msa0357550:intron 40.0%
ATTGGCAAGTTTGGTAAGCA+AGG - chr3_1:40879930-40879949 Msa0357550:intron 40.0%
TTGGTAAGCAAGGCAAGAAA+AGG - chr3_1:40879940-40879959 Msa0357550:intron 40.0%
TGGTAAGCAAGGCAAGAAAA+GGG - chr3_1:40879941-40879960 Msa0357550:intron 40.0%
! TTAACCAAGAGCTAGGGTTT+TGG + chr3_1:40880100-40880119 None:intergenic 40.0%
TAGTCAAGAACTATGGTGCT+TGG + chr3_1:40880171-40880190 None:intergenic 40.0%
GTTGGAAGATGTTTCAAGCT+AGG + chr3_1:40886028-40886047 None:intergenic 40.0%
!! GTTGATTTGGAGCTTGTGTT+GGG + chr3_1:40886135-40886154 None:intergenic 40.0%
!! TGTTGATTTGGAGCTTGTGT+TGG + chr3_1:40886136-40886155 None:intergenic 40.0%
TGAATAAGAAGCCAAGGCTT+TGG + chr3_1:40880336-40880355 None:intergenic 40.0%
GAGATTCAAAAGTTGGGGTT+TGG + chr3_1:40880362-40880381 None:intergenic 40.0%
CTCAAGGTCTCTTAAGCTAA+AGG + chr3_1:40880428-40880447 None:intergenic 40.0%
! CTTTAGCTTAAGAGACCTTG+AGG - chr3_1:40880426-40880445 Msa0357550:intron 40.0%
! GCCATGAAGGAAGAAGATTT+TGG - chr3_1:40880468-40880487 Msa0357550:intron 40.0%
CACTTGTCTTTCTCTCTCTA+GGG + chr3_1:40886394-40886413 None:intergenic 40.0%
TCACTTGTCTTTCTCTCTCT+AGG + chr3_1:40886395-40886414 None:intergenic 40.0%
GGTAATATTCCGATACTGAC+AGG - chr3_1:40886598-40886617 Msa0357550:intron 40.0%
ATATTCCGATACTGACAGGT+CGG - chr3_1:40886602-40886621 Msa0357550:intron 40.0%
AATATCCGACCTGTCAGTAT+CGG + chr3_1:40886610-40886629 None:intergenic 40.0%
CTTAATGCCGAAACCAACTA+TGG - chr3_1:40886987-40887006 Msa0357550:intron 40.0%
! AGACTTGCCATAGTTGGTTT+CGG + chr3_1:40886997-40887016 None:intergenic 40.0%
GAGTCACTGAAAGCAATATG+TGG - chr3_1:40887029-40887048 Msa0357550:intron 40.0%
TTTACAAGAAGCGAGTGTAG+TGG - chr3_1:40887091-40887110 Msa0357550:intron 40.0%
!! TAACACAAACTGGAGTACTG+AGG - chr3_1:40887133-40887152 Msa0357550:intron 40.0%
! TACGTTACCCTCTCTTGTTT+AGG - chr3_1:40888199-40888218 Msa0357550:intron 40.0%
! ACGTTACCCTCTCTTGTTTA+GGG - chr3_1:40888200-40888219 Msa0357550:intron 40.0%
TTCAAGCATCTTATAGGGAG+AGG + chr3_1:40888446-40888465 None:intergenic 40.0%
!! TGTTTTTGTTCTCACGTTCG+GGG + chr3_1:40888973-40888992 None:intergenic 40.0%
! AAAAGCTTTGGCTGATAGTG+AGG + chr3_1:40889216-40889235 None:intergenic 40.0%
GCTGAAATGGTTATGTCATG+AGG + chr3_1:40889262-40889281 None:intergenic 40.0%
!! TTTTTCGGTTGCTGCTGAAA+TGG + chr3_1:40889275-40889294 None:intergenic 40.0%
AAACTCCCAAAACATCACAG+CGG - chr3_1:40889304-40889323 Msa0357550:intron 40.0%
!! TGACGTGGTTCTGGAAATAA+CGG - chr3_1:40889440-40889459 Msa0357550:intron 40.0%
! TGCAAAGCTGCTCTCAATTT+TGG - chr3_1:40890149-40890168 Msa0357550:intron 40.0%
! GCAAAGCTGCTCTCAATTTT+GGG - chr3_1:40890150-40890169 Msa0357550:intron 40.0%
! CAAAGCTGCTCTCAATTTTG+GGG - chr3_1:40890151-40890170 Msa0357550:intron 40.0%
!!! GGGTTATTTTTATGCCGTGT+TGG - chr3_1:40890171-40890190 Msa0357550:intron 40.0%
CAATGGACGACTTAAGTGAT+TGG - chr3_1:40890957-40890976 Msa0357550:intron 40.0%
GACGACTTAAGTGATTGGAA+TGG - chr3_1:40890962-40890981 Msa0357550:intron 40.0%
ACTTGATTGATATCCACAGG+TGG - chr3_1:40891042-40891061 Msa0357550:intron 40.0%
CTTGATTGATATCCACAGGT+GGG - chr3_1:40891043-40891062 Msa0357550:intron 40.0%
!! AAACTTGAGAGTACCGTTAC+TGG - chr3_1:40891082-40891101 Msa0357550:intron 40.0%
AATCCCTCTTTCATGTCAGT+GGG + chr3_1:40891181-40891200 None:intergenic 40.0%
!! GATTGCTTCAGTTGGTAAAG+TGG - chr3_1:40891197-40891216 Msa0357550:intron 40.0%
ACATCTGAACTTCTCTTGCT+TGG - chr3_1:40891220-40891239 Msa0357550:intron 40.0%
CTTGAAATCCCGTAAGTGAA+TGG + chr3_1:40891262-40891281 None:intergenic 40.0%
TGTGGTTGTGAAGTAGCAAA+AGG + chr3_1:40891308-40891327 None:intergenic 40.0%
! GGCAATAGTATATTGGGTTG+TGG + chr3_1:40891326-40891345 None:intergenic 40.0%
CCTTTCAAGAAGCAAATCTG+AGG + chr3_1:40891370-40891389 None:intergenic 40.0%
! CCTCAGATTTGCTTCTTGAA+AGG - chr3_1:40891367-40891386 Msa0357550:intron 40.0%
TGTTACAGGTTACAGAACCT+TGG - chr3_1:40892185-40892204 Msa0357550:intron 40.0%
TTGTTCATCCCACCAAATTC+TGG + chr3_1:40892287-40892306 None:intergenic 40.0%
! TGAAGGTGCAACATTGTTCA+TGG - chr3_1:40892459-40892478 Msa0357550:intron 40.0%
ATGGAGACTACTCAATGTGA+AGG - chr3_1:40892534-40892553 Msa0357550:intron 40.0%
CGACGACAAAAATCTTCGTG+TGG - chr3_1:40877026-40877045 Msa0357550:three_prime_UTR 45.0%
!! AGGGGTACCTCAATAAGAGA+AGG + chr3_1:40877063-40877082 None:intergenic 45.0%
TGACGAAAAGGAAATGCCAC+TGG - chr3_1:40877429-40877448 Msa0357550:CDS 45.0%
CGAGACACATAAACAACCAG+TGG + chr3_1:40877448-40877467 None:intergenic 45.0%
GCTCCTCCTTTGTATCTATG+AGG + chr3_1:40877490-40877509 None:intergenic 45.0%
!! AGGAGGAGCACTCAATACAT+TGG - chr3_1:40877501-40877520 Msa0357550:CDS 45.0%
GTTTCAGGGCTAATCAGCAA+TGG - chr3_1:40877646-40877665 Msa0357550:intron 45.0%
! GCAAGATCTTTGGAGGTTTC+AGG + chr3_1:40877754-40877773 None:intergenic 45.0%
CTGAGGTTGTGGAACATTTG+AGG + chr3_1:40877790-40877809 None:intergenic 45.0%
ACAAGGTGGAAAGGAATGGA+TGG - chr3_1:40877946-40877965 Msa0357550:intron 45.0%
!! ATGGATGGATTAAGAGGTCC+AGG - chr3_1:40877961-40877980 Msa0357550:intron 45.0%
AATCCACATCATCCAGCATC+GGG - chr3_1:40878482-40878501 Msa0357550:intron 45.0%
CACTTGTCGCATCATCCATT+CGG - chr3_1:40878515-40878534 Msa0357550:intron 45.0%
TTAGCAAGCTAGTAGCCGAA+TGG + chr3_1:40878533-40878552 None:intergenic 45.0%
CCTAAGCTATAGGCAACAAC+GGG - chr3_1:40878620-40878639 Msa0357550:CDS 45.0%
CTAAGCTATAGGCAACAACG+GGG - chr3_1:40878621-40878640 Msa0357550:CDS 45.0%
TAAGCTATAGGCAACAACGG+GGG - chr3_1:40878622-40878641 Msa0357550:CDS 45.0%
CAGGTTGTATTGTAGACACG+TGG + chr3_1:40878662-40878681 None:intergenic 45.0%
GTGTCTACAATACAACCTGC+CGG - chr3_1:40878663-40878682 Msa0357550:CDS 45.0%
CCCACACACGTATAATCAAC+CGG + chr3_1:40878685-40878704 None:intergenic 45.0%
CCGGTTGATTATACGTGTGT+GGG - chr3_1:40878682-40878701 Msa0357550:CDS 45.0%
CGGTTGATTATACGTGTGTG+GGG - chr3_1:40878683-40878702 Msa0357550:CDS 45.0%
CTTAGACGGTTGTGCATACT+AGG - chr3_1:40878715-40878734 Msa0357550:intron 45.0%
TCGATGCGTTTACCGTATCT+TGG + chr3_1:40878824-40878843 None:intergenic 45.0%
AAGATACGGTAAACGCATCG+AGG - chr3_1:40878823-40878842 Msa0357550:intron 45.0%
AATCCTAAGCCGGACGATTA+GGG - chr3_1:40878871-40878890 Msa0357550:intron 45.0%
! GTCATGATGGGATTGTACTC+AGG + chr3_1:40879066-40879085 None:intergenic 45.0%
GTACGTACATCGGTCATGAT+GGG + chr3_1:40879078-40879097 None:intergenic 45.0%
TGTACGTACATCGGTCATGA+TGG + chr3_1:40879079-40879098 None:intergenic 45.0%
CATGACCGATGTACGTACAT+CGG - chr3_1:40879080-40879099 Msa0357550:intron 45.0%
! TCTCTTGTTATCCACGTCAG+GGG + chr3_1:40879175-40879194 None:intergenic 45.0%
! GTCTCTTGTTATCCACGTCA+GGG + chr3_1:40879176-40879195 None:intergenic 45.0%
! TGTCTCTTGTTATCCACGTC+AGG + chr3_1:40879177-40879196 None:intergenic 45.0%
ACCTTGATCGATCCGATTAG+CGG - chr3_1:40879277-40879296 Msa0357550:intron 45.0%
AGTTCTCGACTACTATGTCG+AGG - chr3_1:40879445-40879464 Msa0357550:intron 45.0%
AAGTCATGACTCCAAGGCAT+AGG + chr3_1:40879593-40879612 None:intergenic 45.0%
CGAAGAAAAACTGGACCGAA+AGG - chr3_1:40879642-40879661 Msa0357550:intron 45.0%
CAAGTAATACCACAGCAAGG+GGG + chr3_1:40879758-40879777 None:intergenic 45.0%
GCAAGTAATACCACAGCAAG+GGG + chr3_1:40879759-40879778 None:intergenic 45.0%
GGCAAGTAATACCACAGCAA+GGG + chr3_1:40879760-40879779 None:intergenic 45.0%
TGGCAAGTAATACCACAGCA+AGG + chr3_1:40879761-40879780 None:intergenic 45.0%
TGCTGTGGTATTACTTGCCA+TGG - chr3_1:40879761-40879780 Msa0357550:intron 45.0%
!! GGTTTTGGTAGCTTGAGCTT+GGG + chr3_1:40880085-40880104 None:intergenic 45.0%
! GAGGTTTAGGGTTTGACTCA+TGG + chr3_1:40880229-40880248 None:intergenic 45.0%
CGCTTAACAGAAGGGCAATT+TGG + chr3_1:40880648-40880667 None:intergenic 45.0%
! ATGTGGGTTACCCTCGAATT+CGG + chr3_1:40881097-40881116 None:intergenic 45.0%
CTGCAGTACTATTCCAGACT+TGG + chr3_1:40881460-40881479 None:intergenic 45.0%
!! AACAAGTTGGTCCTGAAGTC+TGG - chr3_1:40881540-40881559 Msa0357550:intron 45.0%
ACTTAAGACGTCCAGACTTC+AGG + chr3_1:40881554-40881573 None:intergenic 45.0%
GCAACCCGATTACTTCATTG+TGG - chr3_1:40881835-40881854 Msa0357550:intron 45.0%
CTACCAGATTCCATGTTCCA+TGG - chr3_1:40882037-40882056 Msa0357550:intron 45.0%
! GGATATTGGTTGAAGCCAAC+CGG + chr3_1:40882115-40882134 None:intergenic 45.0%
ACCCAACCAGCAAAAACGTA+AGG + chr3_1:40882308-40882327 None:intergenic 45.0%
GTGCAAGATGAGTCTGTCAT+GGG + chr3_1:40882387-40882406 None:intergenic 45.0%
AGTGCAAGATGAGTCTGTCA+TGG + chr3_1:40882388-40882407 None:intergenic 45.0%
TCACTAGAACCAAGGTCTGA+TGG + chr3_1:40882640-40882659 None:intergenic 45.0%
TTGTTACAACTCGCGTAGAG+TGG + chr3_1:40882670-40882689 None:intergenic 45.0%
CTACGCGAGTTGTAACAAAC+TGG - chr3_1:40882672-40882691 Msa0357550:CDS 45.0%
CACAAGGTTCTTGGATTTCG+TGG + chr3_1:40882853-40882872 None:intergenic 45.0%
! GTATCTAGAATGGACGTCAC+GGG + chr3_1:40882924-40882943 None:intergenic 45.0%
! GGTATCTAGAATGGACGTCA+CGG + chr3_1:40882925-40882944 None:intergenic 45.0%
GTGACGTCCATTCTAGATAC+CGG - chr3_1:40882924-40882943 Msa0357550:intron 45.0%
AGAGGTTCCGGTATCTAGAA+TGG + chr3_1:40882934-40882953 None:intergenic 45.0%
TACCGGAACCTCTAATCTCT+TGG - chr3_1:40882941-40882960 Msa0357550:intron 45.0%
GACCAAGAGATTAGAGGTTC+CGG + chr3_1:40882946-40882965 None:intergenic 45.0%
TTTCGCCCTAAGTTCGCTAT+TGG - chr3_1:40883194-40883213 Msa0357550:intron 45.0%
ACTCGCCAATAGCGAACTTA+GGG + chr3_1:40883202-40883221 None:intergenic 45.0%
AACTCGCCAATAGCGAACTT+AGG + chr3_1:40883203-40883222 None:intergenic 45.0%
ATCCTTAGCTTCCTCCACTA+TGG - chr3_1:40883402-40883421 Msa0357550:intron 45.0%
! ATCCATAGTGGAGGAAGCTA+AGG + chr3_1:40883407-40883426 None:intergenic 45.0%
ATGGGGGAAGTTATCCATAG+TGG + chr3_1:40883419-40883438 None:intergenic 45.0%
TGGACAAGGTTCGAATGTTC+GGG + chr3_1:40883465-40883484 None:intergenic 45.0%
GTGGACAAGGTTCGAATGTT+CGG + chr3_1:40883466-40883485 None:intergenic 45.0%
! GTAGCCTTGCATTTACACTC+TGG - chr3_1:40883577-40883596 Msa0357550:intron 45.0%
!! GGAACGGGTTGAAGTATAGA+AGG + chr3_1:40883612-40883631 None:intergenic 45.0%
GCATTGTCTTACCTTCTCAG+AGG - chr3_1:40883746-40883765 Msa0357550:intron 45.0%
! AAGATGATAGTGCCAGTAGG+TGG + chr3_1:40883802-40883821 None:intergenic 45.0%
ATCTCATACTTCGTTCCTCC+TGG - chr3_1:40883878-40883897 Msa0357550:intron 45.0%
TCTCATACTTCGTTCCTCCT+GGG - chr3_1:40883879-40883898 Msa0357550:intron 45.0%
AACATTTACCCGGAACCCAA+TGG - chr3_1:40883983-40884002 Msa0357550:intron 45.0%
!! ACAAAGGTAGTGGGACCATT+GGG + chr3_1:40884001-40884020 None:intergenic 45.0%
!! AACAAAGGTAGTGGGACCAT+TGG + chr3_1:40884002-40884021 None:intergenic 45.0%
AATCCACATCATCCAGCATC+GGG - chr3_1:40878482-40878501 Msa0357550:intron 45.0%
CACTTGTCGCATCATCCATT+CGG - chr3_1:40878515-40878534 Msa0357550:intron 45.0%
TTAGCAAGCTAGTAGCCGAA+TGG + chr3_1:40878533-40878552 None:intergenic 45.0%
TCCTAAGCTATAGGCAACCA+CGG - chr3_1:40884385-40884404 Msa0357550:intron 45.0%
CAGGTTGTATTGTAGACACG+TGG + chr3_1:40878662-40878681 None:intergenic 45.0%
GTGTCTACAATACAACCTGC+CGG - chr3_1:40878663-40878682 Msa0357550:CDS 45.0%
CCCACACACGTATAATCAAC+CGG + chr3_1:40878685-40878704 None:intergenic 45.0%
CCGGTTGATTATACGTGTGT+GGG - chr3_1:40878682-40878701 Msa0357550:CDS 45.0%
CGGTTGATTATACGTGTGTG+GGG - chr3_1:40878683-40878702 Msa0357550:CDS 45.0%
CTTAGACGGTAGTGCATACT+AGG - chr3_1:40884481-40884500 Msa0357550:intron 45.0%
TCGATGCGTTTACCGTATCT+TGG + chr3_1:40878824-40878843 None:intergenic 45.0%
AAGATACGGTAAACGCATCG+AGG - chr3_1:40878823-40878842 Msa0357550:intron 45.0%
CAATCCTAAGCAGGACGATT+AGG - chr3_1:40884636-40884655 Msa0357550:intron 45.0%
TTTCCCTAATCGTCCTGCTT+AGG + chr3_1:40884643-40884662 None:intergenic 45.0%
GTGATGTCGATGATGTTCCT+AGG + chr3_1:40884666-40884685 None:intergenic 45.0%
! TCATGATGGGATTGTACTCG+GGG + chr3_1:40884847-40884866 None:intergenic 45.0%
! GTCATGATGGGATTGTACTC+GGG + chr3_1:40879066-40879085 None:intergenic 45.0%
! GGTCATGATGGGATTGTACT+CGG + chr3_1:40879067-40879086 None:intergenic 45.0%
GTACGTACATCGGTCATGAT+GGG + chr3_1:40879078-40879097 None:intergenic 45.0%
TGTACGTACATCGGTCATGA+TGG + chr3_1:40879079-40879098 None:intergenic 45.0%
CATGACCGATGTACGTACAT+CGG - chr3_1:40879080-40879099 Msa0357550:intron 45.0%
TTATCCATGTCAGGGGGATA+CGG + chr3_1:40884950-40884969 None:intergenic 45.0%
! CTCTTGTTATCCATGTCAGG+GGG + chr3_1:40884956-40884975 None:intergenic 45.0%
ACCTTGATCGATCCGATTAG+CGG - chr3_1:40879277-40879296 Msa0357550:intron 45.0%
GTCGCGAAGTGTATTCTCTT+CGG + chr3_1:40879393-40879412 None:intergenic 45.0%
AGTTCTCGACTACTATGTCG+AGG - chr3_1:40879445-40879464 Msa0357550:intron 45.0%
AAGTCATGACTCCAAGGCAT+AGG + chr3_1:40879593-40879612 None:intergenic 45.0%
CGAAGAAAAACTGGACCGAA+AGG - chr3_1:40879642-40879661 Msa0357550:intron 45.0%
CAAGTAATACCACAGCAAGG+GGG + chr3_1:40879758-40879777 None:intergenic 45.0%
GCAAGTAATACCACAGCAAG+GGG + chr3_1:40879759-40879778 None:intergenic 45.0%
GGCAAGTAATACCACAGCAA+GGG + chr3_1:40879760-40879779 None:intergenic 45.0%
TGGCAAGTAATACCACAGCA+AGG + chr3_1:40879761-40879780 None:intergenic 45.0%
TGCTGTGGTATTACTTGCCA+TGG - chr3_1:40879761-40879780 Msa0357550:intron 45.0%
!! GGTTTTGGTAGCTTGAGCTT+GGG + chr3_1:40880085-40880104 None:intergenic 45.0%
GGGTTTGACTCATGGTAAGT+TGG + chr3_1:40880221-40880240 None:intergenic 45.0%
! GAGGTTTAGGGTTTGACTCA+TGG + chr3_1:40880229-40880248 None:intergenic 45.0%
CGCTTAACACAAGGGCAATT+TGG + chr3_1:40886473-40886492 None:intergenic 45.0%
CATAGCAGACTTGCCATAGT+TGG + chr3_1:40887003-40887022 None:intergenic 45.0%
! CGTTACCCTCTCTTGTTTAG+GGG - chr3_1:40888201-40888220 Msa0357550:intron 45.0%
! GTTACCCTCTCTTGTTTAGG+GGG - chr3_1:40888202-40888221 Msa0357550:intron 45.0%
ACTACCCCCTAAACAAGAGA+GGG + chr3_1:40888209-40888228 None:intergenic 45.0%
AACTACCCCCTAAACAAGAG+AGG + chr3_1:40888210-40888229 None:intergenic 45.0%
AAAAGTCACGATACCTGACG+CGG + chr3_1:40889143-40889162 None:intergenic 45.0%
! TGTTGCCGCTGTGATGTTTT+GGG + chr3_1:40889312-40889331 None:intergenic 45.0%
! GTTATTTCCAGAACCACGTC+AGG + chr3_1:40889441-40889460 None:intergenic 45.0%
CATAAATGTTGCAAGGCGGA+TGG - chr3_1:40890052-40890071 Msa0357550:intron 45.0%
AAAGTCAGGCAAAGGAGATC+TGG + chr3_1:40890919-40890938 None:intergenic 45.0%
ACACACTCAAAGTCAGGCAA+AGG + chr3_1:40890927-40890946 None:intergenic 45.0%
TACCTCACACACTCAAAGTC+AGG + chr3_1:40890933-40890952 None:intergenic 45.0%
AGTGTGTGAGGTAAACGCAA+TGG - chr3_1:40890940-40890959 Msa0357550:intron 45.0%
ATGAAGGAGGTAGCCAGTAA+CGG + chr3_1:40891098-40891117 None:intergenic 45.0%
GGTGCACATCCTAAGAAACA+TGG + chr3_1:40891160-40891179 None:intergenic 45.0%
CAATCCCTCTTTCATGTCAG+TGG + chr3_1:40891182-40891201 None:intergenic 45.0%
GAAAGAGGGATTGCTTCAGT+TGG - chr3_1:40891189-40891208 Msa0357550:intron 45.0%
TTCATCCCACCAAATTCTGG+AGG + chr3_1:40892284-40892303 None:intergenic 45.0%
!! ATTATGAATATATAATTAAT+AGG - chr3_1:40877291-40877310 Msa0357550:CDS 5.0%
!! TTATGAATATATAATTAATA+GGG - chr3_1:40877292-40877311 Msa0357550:CDS 5.0%
!!! AATTTAAATAAAATTTTTGT+AGG + chr3_1:40882700-40882719 None:intergenic 5.0%
!! TAAAATATTAAATAAGTTAA+AGG + chr3_1:40887222-40887241 None:intergenic 5.0%
!!! ATTATTGTAATTTTATTTTT+TGG - chr3_1:40888696-40888715 Msa0357550:intron 5.0%
!! TAGAAAATAATAATAATATA+CGG - chr3_1:40890204-40890223 Msa0357550:intron 5.0%
TTAAGAGGTCCAGGTCTCAC+TGG - chr3_1:40877970-40877989 Msa0357550:intron 50.0%
CCCGTTGTTGCCTATAGCTT+AGG + chr3_1:40878623-40878642 None:intergenic 50.0%
CAACAACGGGGGAAAACCTA+CGG - chr3_1:40878633-40878652 Msa0357550:CDS 50.0%
CACACGTATAATCAACCGGC+AGG + chr3_1:40878681-40878700 None:intergenic 50.0%
GCCGGTTGATTATACGTGTG+TGG - chr3_1:40878681-40878700 Msa0357550:CDS 50.0%
TGGGGACTTGCATGCTTAGA+CGG - chr3_1:40878701-40878720 Msa0357550:CDS 50.0%
TTGTGTGTCATGGCGGTCAA+GGG - chr3_1:40878781-40878800 Msa0357550:intron 50.0%
CAATCCTAAGCCGGACGATT+AGG - chr3_1:40878870-40878889 Msa0357550:intron 50.0%
TTTCCCTAATCGTCCGGCTT+AGG + chr3_1:40878877-40878896 None:intergenic 50.0%
CCTAGGTTTCCCTAATCGTC+CGG + chr3_1:40878883-40878902 None:intergenic 50.0%
GGGAAACCTAGGAACGTCAT+CGG - chr3_1:40878891-40878910 Msa0357550:intron 50.0%
! ATTTTATGGAGAGTCCCGGG+TGG - chr3_1:40879034-40879053 Msa0357550:intron 50.0%
GGAGTCCGATGTACGTACAT+CGG + chr3_1:40879088-40879107 None:intergenic 50.0%
ACGGGAGGTTCTCGAATCAA+GGG + chr3_1:40879149-40879168 None:intergenic 50.0%
TACGGGAGGTTCTCGAATCA+AGG + chr3_1:40879150-40879169 None:intergenic 50.0%
TTATCCACGTCAGGGGGATA+CGG + chr3_1:40879168-40879187 None:intergenic 50.0%
! CTCTTGTTATCCACGTCAGG+GGG + chr3_1:40879174-40879193 None:intergenic 50.0%
TCGGATCGATCAAGGTTCTG+AGG + chr3_1:40879273-40879292 None:intergenic 50.0%
ACCGCTAATCGGATCGATCA+AGG + chr3_1:40879281-40879300 None:intergenic 50.0%
TGCCTTGGAGTCATGACTTG+AGG - chr3_1:40879594-40879613 Msa0357550:intron 50.0%
GCCTTGGAGTCATGACTTGA+GGG - chr3_1:40879595-40879614 Msa0357550:intron 50.0%
CCTTGGAGTCATGACTTGAG+GGG - chr3_1:40879596-40879615 Msa0357550:intron 50.0%
!! TGGACCGAAAGGCGTCAAAA+CGG - chr3_1:40879653-40879672 Msa0357550:intron 50.0%
AAACAACTCGCCATTGCGAG+TGG + chr3_1:40879713-40879732 None:intergenic 50.0%
ATGGCGAGTTGTTTGCGAGT+TGG - chr3_1:40879719-40879738 Msa0357550:intron 50.0%
TGGCGAGTTGTTTGCGAGTT+GGG - chr3_1:40879720-40879739 Msa0357550:intron 50.0%
TGGACTGTCATAACTCGCCA+CGG + chr3_1:40879801-40879820 None:intergenic 50.0%
!! GGGTTTTGGTAGCTTGAGCT+TGG + chr3_1:40880086-40880105 None:intergenic 50.0%
! GCTACCAAAACCCTAGCTCT+TGG - chr3_1:40880093-40880112 Msa0357550:intron 50.0%
TGGAGAGGAATAGGGAGAGA+TGG - chr3_1:40880501-40880520 Msa0357550:intron 50.0%
ATGGCGTGAGAGAAGAGAGA+AGG - chr3_1:40880520-40880539 Msa0357550:intron 50.0%
TGGCGTGAGAGAAGAGAGAA+GGG - chr3_1:40880521-40880540 Msa0357550:intron 50.0%
AATCGTCTGACACGATCGAC+TGG - chr3_1:40880752-40880771 Msa0357550:intron 50.0%
! AGATGCAAGTGAGCACTGCA+GGG + chr3_1:40880932-40880951 None:intergenic 50.0%
! TAGATGCAAGTGAGCACTGC+AGG + chr3_1:40880933-40880952 None:intergenic 50.0%
TCTCTCTACACCCGAATTCG+AGG - chr3_1:40881083-40881102 Msa0357550:intron 50.0%
CTCTCTACACCCGAATTCGA+GGG - chr3_1:40881084-40881103 Msa0357550:intron 50.0%
! TGTGGGTTACCCTCGAATTC+GGG + chr3_1:40881096-40881115 None:intergenic 50.0%
GAGCATGTGAATCGCAAGAC+TGG + chr3_1:40881175-40881194 None:intergenic 50.0%
ATTGGTTGAAGCCAACCGGT+GGG + chr3_1:40882111-40882130 None:intergenic 50.0%
! TATTGGTTGAAGCCAACCGG+TGG + chr3_1:40882112-40882131 None:intergenic 50.0%
CCAAGGTCTGATGGCTCATT+TGG + chr3_1:40882631-40882650 None:intergenic 50.0%
CCAAATGAGCCATCAGACCT+TGG - chr3_1:40882628-40882647 Msa0357550:intron 50.0%
!! CAATTCGTCTCTAGGGTCTG+TGG + chr3_1:40883151-40883170 None:intergenic 50.0%
! AGTTGATGCTTGCCAGGCAT+AGG + chr3_1:40883314-40883333 None:intergenic 50.0%
GGGGAAGTTATCCATAGTGG+AGG + chr3_1:40883416-40883435 None:intergenic 50.0%
GATAAGCGGCAACGTAATGG+GGG + chr3_1:40883435-40883454 None:intergenic 50.0%
CGATAAGCGGCAACGTAATG+GGG + chr3_1:40883436-40883455 None:intergenic 50.0%
GCGATAAGCGGCAACGTAAT+GGG + chr3_1:40883437-40883456 None:intergenic 50.0%
TGCGATAAGCGGCAACGTAA+TGG + chr3_1:40883438-40883457 None:intergenic 50.0%
GTTCGGGAAGTTGCGATAAG+CGG + chr3_1:40883449-40883468 None:intergenic 50.0%
GCTAAGAAGGGACGTTTCGA+CGG + chr3_1:40883728-40883747 None:intergenic 50.0%
! GTCGATTCAGATCGTGCCTT+GGG + chr3_1:40884037-40884056 None:intergenic 50.0%
CCTAAGCTATAGGCAACCAC+GGG - chr3_1:40884386-40884405 Msa0357550:intron 50.0%
CTAAGCTATAGGCAACCACG+GGG - chr3_1:40884387-40884406 Msa0357550:intron 50.0%
TAAGCTATAGGCAACCACGG+GGG - chr3_1:40884388-40884407 Msa0357550:intron 50.0%
CAACCACGGGGGAAAATCTA+CGG - chr3_1:40884399-40884418 Msa0357550:intron 50.0%
CACACGTATAATCAACCGGC+AGG + chr3_1:40878681-40878700 None:intergenic 50.0%
GCCGGTTGATTATACGTGTG+TGG - chr3_1:40878681-40878700 Msa0357550:CDS 50.0%
TGGGGACTTGCATGCTTAGA+CGG - chr3_1:40878701-40878720 Msa0357550:CDS 50.0%
TTGTGTGTCATGGCGGTCAA+GGG - chr3_1:40878781-40878800 Msa0357550:intron 50.0%
CAGGACGATTAGGGAAACCT+AGG - chr3_1:40884646-40884665 Msa0357550:intron 50.0%
! ATTTTATGGAGAGTCCCGGG+TGG - chr3_1:40879034-40879053 Msa0357550:intron 50.0%
GGAGTCCGATGTACGTACAT+CGG + chr3_1:40879088-40879107 None:intergenic 50.0%
GGGAACGATTCAAGCCGTAA+GGG + chr3_1:40884910-40884929 None:intergenic 50.0%
ACGGGAGGTTCTCGACTTAA+GGG + chr3_1:40884931-40884950 None:intergenic 50.0%
TACGGGAGGTTCTCGACTTA+AGG + chr3_1:40884932-40884951 None:intergenic 50.0%
TATCCATGTCAGGGGGATAC+GGG + chr3_1:40884949-40884968 None:intergenic 50.0%
TCGGATCGATCAAGGTTTCG+AGG + chr3_1:40885055-40885074 None:intergenic 50.0%
ACCGCTAATCGGATCGATCA+AGG + chr3_1:40879281-40879300 None:intergenic 50.0%
TGCCTTGGAGTCATGACTTG+AGG - chr3_1:40879594-40879613 Msa0357550:intron 50.0%
GCCTTGGAGTCATGACTTGA+GGG - chr3_1:40879595-40879614 Msa0357550:intron 50.0%
CCTTGGAGTCATGACTTGAG+GGG - chr3_1:40879596-40879615 Msa0357550:intron 50.0%
!! TGGACCGAAAGGCGTCAAAA+CGG - chr3_1:40879653-40879672 Msa0357550:intron 50.0%
TGCCATGTTGTCACTCGCAA+TGG - chr3_1:40885482-40885501 Msa0357550:intron 50.0%
GGCGAGTTGTTTACTCGCAA+TGG - chr3_1:40885503-40885522 Msa0357550:intron 50.0%
ATGGCGAGTTGTTTGCGAGT+TGG - chr3_1:40879719-40879738 Msa0357550:intron 50.0%
TGGCGAGTTGTTTGCGAGTT+GGG - chr3_1:40879720-40879739 Msa0357550:intron 50.0%
TGGACTGTCATAACTCGCCA+CGG + chr3_1:40879801-40879820 None:intergenic 50.0%
!! GGGTTTTGGTAGCTTGAGCT+TGG + chr3_1:40880086-40880105 None:intergenic 50.0%
! GCTACCAAAACCCTAGCTCT+TGG - chr3_1:40880093-40880112 Msa0357550:intron 50.0%
TGGAGAGGAATAGGGAGAGA+TGG - chr3_1:40880501-40880520 Msa0357550:intron 50.0%
ATGGCGTGAGAGAAGAGAGA+AGG - chr3_1:40880520-40880539 Msa0357550:intron 50.0%
TGGCGTGAGAGAAGAGAGAA+GGG - chr3_1:40880521-40880540 Msa0357550:intron 50.0%
AATCGTCTGACACGATCGAC+TGG - chr3_1:40880752-40880771 Msa0357550:intron 50.0%
TCTCTCTCTCTCTCTCTCTC+TGG + chr3_1:40887794-40887813 None:intergenic 50.0%
!! GTTGTTTCTAGAACCGCGTC+AGG - chr3_1:40889127-40889146 Msa0357550:intron 50.0%
! GTGTTGCCGCTGTGATGTTT+TGG + chr3_1:40889313-40889332 None:intergenic 50.0%
TCAACTCACCATACCTGACG+TGG - chr3_1:40889425-40889444 Msa0357550:intron 50.0%
TTCCAGAACCACGTCAGGTA+TGG + chr3_1:40889436-40889455 None:intergenic 50.0%
AAATGTTGCAAGGCGGATGG+TGG - chr3_1:40890055-40890074 Msa0357550:intron 50.0%
AGGCTTAGTCACTAGCGGAA+GGG - chr3_1:40890078-40890097 Msa0357550:intron 50.0%
TAGTCACTAGCGGAAGGGTT+AGG - chr3_1:40890083-40890102 Msa0357550:intron 50.0%
AGGATCAGGATTCTCTCTCG+TGG - chr3_1:40890846-40890865 Msa0357550:intron 50.0%
TGGATGGTCCACATTCACAC+GGG + chr3_1:40890899-40890918 None:intergenic 50.0%
CTGGATGGTCCACATTCACA+CGG + chr3_1:40890900-40890919 None:intergenic 50.0%
TCAGGCAAAGGAGATCTGGA+TGG + chr3_1:40890915-40890934 None:intergenic 50.0%
TGCCTGACTTTGAGTGTGTG+AGG - chr3_1:40890928-40890947 Msa0357550:intron 50.0%
GCATAAGAGAATCCCACCTG+TGG + chr3_1:40891058-40891077 None:intergenic 50.0%
ACCTCCTTCATTGCAGAGGA+TGG - chr3_1:40891107-40891126 Msa0357550:intron 50.0%
TCCATCCTCTGCAATGAAGG+AGG + chr3_1:40891111-40891130 None:intergenic 50.0%
TCCTTCATTGCAGAGGATGG+AGG - chr3_1:40891110-40891129 Msa0357550:intron 50.0%
ACCTCCATCCTCTGCAATGA+AGG + chr3_1:40891114-40891133 None:intergenic 50.0%
TGCACCCACTGACATGAAAG+AGG - chr3_1:40891174-40891193 Msa0357550:intron 50.0%
GCACCCACTGACATGAAAGA+GGG - chr3_1:40891175-40891194 Msa0357550:intron 50.0%
TGGCTCCTCCAGAATTTGGT+GGG - chr3_1:40892276-40892295 Msa0357550:CDS 50.0%
TTTCCACTGCCAGTGAGACC+TGG + chr3_1:40877982-40878001 None:intergenic 55.0%
GTACCCGATGCTGGATGATG+TGG + chr3_1:40878488-40878507 None:intergenic 55.0%
TGTTCGTTCGTACCCGATGC+TGG + chr3_1:40878497-40878516 None:intergenic 55.0%
TGTAGACACGTGGTGACCGT+AGG + chr3_1:40878652-40878671 None:intergenic 55.0%
CTTGTGTGTCATGGCGGTCA+AGG - chr3_1:40878780-40878799 Msa0357550:intron 55.0%
CCGGACGATTAGGGAAACCT+AGG - chr3_1:40878880-40878899 Msa0357550:intron 55.0%
GTGATGCCGATGACGTTCCT+AGG + chr3_1:40878900-40878919 None:intergenic 55.0%
TACTCAGGGTTACTCCACCC+GGG + chr3_1:40879051-40879070 None:intergenic 55.0%
GTACTCAGGGTTACTCCACC+CGG + chr3_1:40879052-40879071 None:intergenic 55.0%
GTACGTACATCGGACTCCCT+CGG - chr3_1:40879090-40879109 Msa0357550:intron 55.0%
! GGTGTCGTGTGGGTACCTTA+CGG - chr3_1:40879111-40879130 Msa0357550:intron 55.0%
GGGGAACAGTTCAAGCCGTA+AGG + chr3_1:40879129-40879148 None:intergenic 55.0%
CGGGAGGTTCTCGAATCAAG+GGG + chr3_1:40879148-40879167 None:intergenic 55.0%
TATCCACGTCAGGGGGATAC+GGG + chr3_1:40879167-40879186 None:intergenic 55.0%
GAGACACGAACACCGACATG+CGG - chr3_1:40879191-40879210 Msa0357550:intron 55.0%
CCCCTCAAGTCATGACTCCA+AGG + chr3_1:40879599-40879618 None:intergenic 55.0%
!! GGACCGAAAGGCGTCAAAAC+GGG - chr3_1:40879654-40879673 Msa0357550:intron 55.0%
!! AGGCCCGTTTTGACGCCTTT+CGG + chr3_1:40879660-40879679 None:intergenic 55.0%
! GCATGCTGTTTGCTCGCTTC+AGG + chr3_1:40879680-40879699 None:intergenic 55.0%
GGCGAGTTGTTTGCGAGTTG+GGG - chr3_1:40879721-40879740 Msa0357550:intron 55.0%
! GCGAGTTGTTTGCGAGTTGG+GGG - chr3_1:40879722-40879741 Msa0357550:intron 55.0%
GAGTAAACACCCCCTTGCTG+TGG - chr3_1:40879746-40879765 Msa0357550:intron 55.0%
! TGAGCACTGCAGGGCAAACT+TGG + chr3_1:40880923-40880942 None:intergenic 55.0%
TCACTTACGACGCGCCTCAT+TGG - chr3_1:40881582-40881601 Msa0357550:intron 55.0%
TGGGAATCAGAGTAGCGCGA+AGG + chr3_1:40882092-40882111 None:intergenic 55.0%
CTACTCTGATTCCCACCGGT+TGG - chr3_1:40882097-40882116 Msa0357550:intron 55.0%
GGTGTGTACGCCGAGATACA+AGG + chr3_1:40882437-40882456 None:intergenic 55.0%
! TGATAGTGCCAGTAGGTGGC+CGG + chr3_1:40883798-40883817 None:intergenic 55.0%
AGAGCTGAATAGGACCCAGG+AGG + chr3_1:40883896-40883915 None:intergenic 55.0%
CTGAGAGCTGAATAGGACCC+AGG + chr3_1:40883899-40883918 None:intergenic 55.0%
CTGGGTCCTATTCAGCTCTC+AGG - chr3_1:40883897-40883916 Msa0357550:intron 55.0%
CGGATGCCTGAGAGCTGAAT+AGG + chr3_1:40883906-40883925 None:intergenic 55.0%
TAGTGGGACCATTGGGTTCC+GGG + chr3_1:40883994-40884013 None:intergenic 55.0%
! GTAGTGGGACCATTGGGTTC+CGG + chr3_1:40883995-40884014 None:intergenic 55.0%
! GGTCGATTCAGATCGTGCCT+TGG + chr3_1:40884038-40884057 None:intergenic 55.0%
GTACCCGATGCTGGATGATG+TGG + chr3_1:40878488-40878507 None:intergenic 55.0%
TGTTCGTTCGTACCCGATGC+TGG + chr3_1:40878497-40878516 None:intergenic 55.0%
CCCGTGGTTGCCTATAGCTT+AGG + chr3_1:40884389-40884408 None:intergenic 55.0%
! TGACCGTAGATTTTCCCCCG+TGG + chr3_1:40884405-40884424 None:intergenic 55.0%
CTTGTGTGTCATGGCGGTCA+AGG - chr3_1:40878780-40878799 Msa0357550:intron 55.0%
GGGGAACGATTCAAGCCGTA+AGG + chr3_1:40884911-40884930 None:intergenic 55.0%
CGGGAGGTTCTCGACTTAAG+GGG + chr3_1:40884930-40884949 None:intergenic 55.0%
GAGACACGAACACCGACATG+TGG - chr3_1:40879191-40879210 Msa0357550:intron 55.0%
CCCCTCAAGTCATGACTCCA+AGG + chr3_1:40879599-40879618 None:intergenic 55.0%
!! GGACCGAAAGGCGTCAAAAC+GGG - chr3_1:40879654-40879673 Msa0357550:intron 55.0%
!! AGGCCCGTTTTGACGCCTTT+CGG + chr3_1:40879660-40879679 None:intergenic 55.0%
! GCATGCTGTTTGCTCGCTTC+AGG + chr3_1:40879680-40879699 None:intergenic 55.0%
CGCCATTGCGAGTGACAACA+TGG + chr3_1:40885487-40885506 None:intergenic 55.0%
GCAAGTTGCCTCACTCGCAA+TGG - chr3_1:40885525-40885544 Msa0357550:intron 55.0%
ACAACTCGCCATTGCGAGTG+AGG + chr3_1:40879711-40879730 None:intergenic 55.0%
GGCGAGTTGTTTGCGAGTTG+GGG - chr3_1:40879721-40879740 Msa0357550:intron 55.0%
! GCGAGTTGTTTGCGAGTTGG+GGG - chr3_1:40879722-40879741 Msa0357550:intron 55.0%
GAGTAAACACCCCCTTGCTG+TGG - chr3_1:40879746-40879765 Msa0357550:intron 55.0%
TCACGTTCGGGGTTGTGGAA+TGG + chr3_1:40888962-40888981 None:intergenic 55.0%
TGTTCTCACGTTCGGGGTTG+TGG + chr3_1:40888967-40888986 None:intergenic 55.0%
! GCTTTGGCTGATAGTGAGGC+AGG + chr3_1:40889212-40889231 None:intergenic 55.0%
CACCATACCTGACGTGGTTC+TGG - chr3_1:40889431-40889450 Msa0357550:intron 55.0%
GGTGGAGGCTTAGTCACTAG+CGG - chr3_1:40890073-40890092 Msa0357550:intron 55.0%
GAGGCTTAGTCACTAGCGGA+AGG - chr3_1:40890077-40890096 Msa0357550:intron 55.0%
CTCTCTCGTGGCAATCTCAC+TGG - chr3_1:40890858-40890877 Msa0357550:intron 55.0%
TCCACATTCACACGGGAGTC+GGG + chr3_1:40890892-40890911 None:intergenic 55.0%
GTCCACATTCACACGGGAGT+CGG + chr3_1:40890893-40890912 None:intergenic 55.0%
GGCTACCTCCTTCATTGCAG+AGG - chr3_1:40891103-40891122 Msa0357550:intron 55.0%
GTGGTGGCTCCTCCAGAATT+TGG - chr3_1:40892272-40892291 Msa0357550:CDS 55.0%
GTGGCTCCTCCAGAATTTGG+TGG - chr3_1:40892275-40892294 Msa0357550:CDS 55.0%
AGGTACCCACACGACACCGA+GGG + chr3_1:40879109-40879128 None:intergenic 60.0%
! AAGGTACCCACACGACACCG+AGG + chr3_1:40879110-40879129 None:intergenic 60.0%
TGCCATGCTGCCACTCGCAA+TGG - chr3_1:40879700-40879719 Msa0357550:intron 60.0%
CGCGCTACTCTGATTCCCAC+CGG - chr3_1:40882093-40882112 Msa0357550:intron 60.0%
AAGGGACGTTTCGACGGCGT+TGG + chr3_1:40883722-40883741 None:intergenic 60.0%
TTAGTTCCCCGGCCACCTAC+TGG - chr3_1:40883787-40883806 Msa0357550:intron 60.0%
ATAGTGCCAGTAGGTGGCCG+GGG + chr3_1:40883796-40883815 None:intergenic 60.0%
GATAGTGCCAGTAGGTGGCC+GGG + chr3_1:40883797-40883816 None:intergenic 60.0%
TACTCGGGGTTACTCCACCC+GGG + chr3_1:40884833-40884852 None:intergenic 60.0%
GTACTCGGGGTTACTCCACC+CGG + chr3_1:40884834-40884853 None:intergenic 60.0%
AGTGTCGTGCGGGTCCCTTA+CGG - chr3_1:40884893-40884912 Msa0357550:intron 60.0%
CGGCGAGCACTTACTCACCA+TGG + chr3_1:40885606-40885625 None:intergenic 60.0%
TGGTGAGTAAGTGCTCGCCG+TGG - chr3_1:40885606-40885625 Msa0357550:intron 60.0%
! TGTTGCAAGGCGGATGGTGG+AGG - chr3_1:40890058-40890077 Msa0357550:intron 60.0%
CACATTCACACGGGAGTCGG+GGG + chr3_1:40890890-40890909 None:intergenic 60.0%
CCACATTCACACGGGAGTCG+GGG + chr3_1:40890891-40890910 None:intergenic 60.0%
GGTCCAGGTCTCACTGGCAG+TGG - chr3_1:40877976-40877995 Msa0357550:intron 65.0%
!! GGACTCCCTCGGTGTCGTGT+GGG - chr3_1:40879101-40879120 Msa0357550:intron 65.0%
CGCCATTGCGAGTGGCAGCA+TGG + chr3_1:40879705-40879724 None:intergenic 65.0%
CGGCGAGCACTTACTCGCCA+TGG + chr3_1:40879781-40879800 None:intergenic 65.0%
TGGCGAGTAAGTGCTCGCCG+TGG - chr3_1:40879781-40879800 Msa0357550:intron 65.0%
CGGACTCCCTCAGTGTCGTG+CGG - chr3_1:40884882-40884901 Msa0357550:intron 65.0%
GGACTCCCTCAGTGTCGTGC+GGG - chr3_1:40884883-40884902 Msa0357550:intron 65.0%
AGGGACCCGCACGACACTGA+GGG + chr3_1:40884891-40884910 None:intergenic 65.0%
AAGGGACCCGCACGACACTG+AGG + chr3_1:40884892-40884911 None:intergenic 65.0%
CCATGTCAGGGGGATACGGG+AGG + chr3_1:40884946-40884965 None:intergenic 65.0%
CCTCCCGTATCCCCCTGACA+TGG - chr3_1:40884943-40884962 Msa0357550:intron 65.0%
CCCCGACTCCCGTGTGAATG+TGG - chr3_1:40890888-40890907 Msa0357550:intron 65.0%
!! CGGACTCCCTCGGTGTCGTG+TGG - chr3_1:40879100-40879119 Msa0357550:intron 70.0%
CCACGTCAGGGGGATACGGG+AGG + chr3_1:40879164-40879183 None:intergenic 70.0%
CCTCCCGTATCCCCCTGACG+TGG - chr3_1:40879161-40879180 Msa0357550:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 40876997 40892792 40876997 ID=Msa0357550;Name=Msa0357550
chr3_1 mRNA 40876997 40892792 40876997 ID=Msa0357550-mRNA-1;Parent=Msa0357550;Name=Msa0357550-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0.14|1|1|1|7|132|430
chr3_1 exon 40876997 40877596 40876997 ID=Msa0357550-mRNA-1:exon:7144;Parent=Msa0357550-mRNA-1
chr3_1 exon 40878579 40878728 40878579 ID=Msa0357550-mRNA-1:exon:7143;Parent=Msa0357550-mRNA-1
chr3_1 exon 40882635 40882813 40882635 ID=Msa0357550-mRNA-1:exon:7142;Parent=Msa0357550-mRNA-1
chr3_1 exon 40891741 40891843 40891741 ID=Msa0357550-mRNA-1:exon:7141;Parent=Msa0357550-mRNA-1
chr3_1 exon 40891937 40892149 40891937 ID=Msa0357550-mRNA-1:exon:7140;Parent=Msa0357550-mRNA-1
chr3_1 exon 40892267 40892368 40892267 ID=Msa0357550-mRNA-1:exon:7139;Parent=Msa0357550-mRNA-1
chr3_1 exon 40892715 40892792 40892715 ID=Msa0357550-mRNA-1:exon:7138;Parent=Msa0357550-mRNA-1
chr3_1 CDS 40892715 40892792 40892715 ID=Msa0357550-mRNA-1:cds;Parent=Msa0357550-mRNA-1
chr3_1 CDS 40892267 40892368 40892267 ID=Msa0357550-mRNA-1:cds;Parent=Msa0357550-mRNA-1
chr3_1 CDS 40891937 40892149 40891937 ID=Msa0357550-mRNA-1:cds;Parent=Msa0357550-mRNA-1
chr3_1 CDS 40891741 40891843 40891741 ID=Msa0357550-mRNA-1:cds;Parent=Msa0357550-mRNA-1
chr3_1 CDS 40882635 40882813 40882635 ID=Msa0357550-mRNA-1:cds;Parent=Msa0357550-mRNA-1
chr3_1 CDS 40878579 40878728 40878579 ID=Msa0357550-mRNA-1:cds;Parent=Msa0357550-mRNA-1
chr3_1 CDS 40877129 40877596 40877129 ID=Msa0357550-mRNA-1:cds;Parent=Msa0357550-mRNA-1
chr3_1 three_prime_UTR 40876997 40877128 40876997 ID=Msa0357550-mRNA-1:three_prime_utr;Parent=Msa0357550-mRNA-1
Gene Sequence

>Msa0357550

ATGGAGAAAAATATTGAGGAATTGCAAAGCGACGACAAAAATCTTCGTGTGGTGAATGATAGGCCTTCTCTTATTGAGATCATTAATGACGAAAAGGAAATGCCACTGGTTGTTTATGTGTCTCGTGAAAGAAGACCATATGTTCCTCATAGATACAAAGGAGGAGCACTCAATACATTGCTTAGGGTTTCAGGGCTAATCAGCAATGGCCCTTATTTACTTGTCTTAGATTGTGATATGAATTGTAATGATTCATCATCAGCCAAACAATCCATGTGCTTTTTTCTTGATCCTGAAACCTCCAAAGATCTTGCTTTTGTCCAATTCCCTCAAATGTTCCACAACCTCAGCAAGAAAGATATATATGATAGTCAGGCTAGGAATGCTTTTATGACAAGGTGGAAAGGAATGGATGGATTAAGAGGTCCAGGTCTCACTGGCAGTGGAAATTATTTAAGTAGAAGTGCATTACTCTTTGGAAGTCCAAAACAAAAAGGGGACTATCTACTTAATGCCGAAACCAACTATGGCAAGTCTGCTATGTATGTAGAGTCACTGAAAGCAATATGTGGTCAACAAACTACTAATCAAAATGCTTCAAGACATGTAGTTTTACAAGAAGCGAGTGTAGTGGCTTCTTGTTCCTATGAAAGTAACACAAACTGGAGTACTGAGGTGGGATTCTCTTATGCTATAAAACTTGAGAGTACCGTTACTGGCTACCTCCTTCATTGCAGAGGATGGAGGTCAACCTATCTTTATCCAAAAATACCATGTTTCTTAGGATGTGCACCCACTGACATGAAAGAGGGATTGCTTCAGTTGGTTACAGAACCTTGGTTTATAGTGTTTACAGTATTATATGTATCCACTCAAATTCAACATTATATTGAGGTAATTTCAAGTGGTGGCTCCTCCAGAATTTGGTGGGATGAACAAAGAAGTTTGATTGTAAAATCAATTGGATGTTTTTTTGCAATTATAGAAGCAGCAAAAAAATGGTTTGGGTTGAACAAGGGAAAATTCAATTTATCAAACAAAGCAGTTGACAAAGATAAGGTAAAGCAATATGAGCAGGGTAAGTTTAATTTTGAAGGTGCAACATTGTTCATGGCACCATTGATTGTGTTGCTCATAATAAACATTGTTTGCTTCTTTGGTGGTTTATGGAGACTACTCAATGTGAAGGATTTTAATGAAATGTTTGGCCAACTTTTTCTCGTTAGCTATCTAATAGCTCTAAGTTATCCTATTATTGAGGGGATTATAAGTATGAAACGCAAGGTTGGGTAG
Protein sequence

>Msa0357550

MEKNIEELQSDDKNLRVVNDRPSLIEIINDEKEMPLVVYVSRERRPYVPHRYKGGALNTLLRVSGLISNGPYLLVLDCDMNCNDSSSAKQSMCFFLDPETSKDLAFVQFPQMFHNLSKKDIYDSQARNAFMTRWKGMDGLRGPGLTGSGNYLSRSALLFGSPKQKGDYLLNAETNYGKSAMYVESLKAICGQQTTNQNASRHVVLQEASVVASCSYESNTNWSTEVGFSYAIKLESTVTGYLLHCRGWRSTYLYPKIPCFLGCAPTDMKEGLLQLVTEPWFIVFTVLYVSTQIQHYIEVISSGGSSRIWWDEQRSLIVKSIGCFFAIIEAAKKWFGLNKGKFNLSNKAVDKDKVKQYEQGKFNFEGATLFMAPLIVLLIINIVCFFGGLWRLLNVKDFNEMFGQLFLVSYLIALSYPIIEGIISMKRKVG*