Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038170 | XP_013450547.1 | 94.643 | 560 | 18 | 4 | 1 | 559 | 1 | 549 | 0.0 | 1076 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038170 | sp|Q8GWB7|GUX6_ARATH | 67.358 | 530 | 155 | 5 | 31 | 559 | 25 | 537 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038170 | A0A072UFK8 | 93.560 | 559 | 26 | 2 | 1 | 559 | 1 | 549 | 0.0 | 1061 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002880 | Msa1038170 | 0.803233 | 3.843520e-49 | -8.615850e-47 |
| Msa0004180 | Msa1038170 | -0.814450 | 1.531359e-51 | -8.615850e-47 |
| Msa0011040 | Msa1038170 | 0.800256 | 1.569645e-48 | -8.615850e-47 |
| Msa0027020 | Msa1038170 | -0.810598 | 1.064573e-50 | -8.615850e-47 |
| Msa0042210 | Msa1038170 | -0.816104 | 6.567089e-52 | -8.615850e-47 |
| Msa0048380 | Msa1038170 | 0.809006 | 2.341858e-50 | -8.615850e-47 |
| Msa0051480 | Msa1038170 | 0.807103 | 5.952648e-50 | -8.615850e-47 |
| Msa0070120 | Msa1038170 | 0.802681 | 4.999349e-49 | -8.615850e-47 |
| Msa0075080 | Msa1038170 | -0.817401 | 3.361790e-52 | -8.615850e-47 |
| Msa0107830 | Msa1038170 | 0.802395 | 5.725482e-49 | -8.615850e-47 |
| Msa0111730 | Msa1038170 | 0.818248 | 2.164556e-52 | -8.615850e-47 |
| Msa0111780 | Msa1038170 | 0.804801 | 1.814229e-49 | -8.615850e-47 |
| Msa0117650 | Msa1038170 | 0.804370 | 2.232340e-49 | -8.615850e-47 |
| Msa0120450 | Msa1038170 | 0.803219 | 3.869413e-49 | -8.615850e-47 |
| Msa0614960 | Msa1038170 | 0.805676 | 1.189955e-49 | -8.615850e-47 |
| Msa0619030 | Msa1038170 | -0.805950 | 1.041958e-49 | -8.615850e-47 |
| Msa0620050 | Msa1038170 | -0.807737 | 4.368137e-50 | -8.615850e-47 |
| Msa0628200 | Msa1038170 | 0.834206 | 3.426407e-56 | -8.615850e-47 |
| Msa0629160 | Msa1038170 | 0.814435 | 1.543026e-51 | -8.615850e-47 |
| Msa0637590 | Msa1038170 | 0.811635 | 6.343653e-51 | -8.615850e-47 |
| Msa0652590 | Msa1038170 | 0.808678 | 2.751743e-50 | -8.615850e-47 |
| Msa0655370 | Msa1038170 | 0.827237 | 1.748094e-54 | -8.615850e-47 |
| Msa0660650 | Msa1038170 | 0.811422 | 7.057981e-51 | -8.615850e-47 |
| Msa0666950 | Msa1038170 | 0.817205 | 3.721202e-52 | -8.615850e-47 |
| Msa0679220 | Msa1038170 | 0.801136 | 1.038112e-48 | -8.615850e-47 |
| Msa0699170 | Msa1038170 | 0.815184 | 1.053030e-51 | -8.615850e-47 |
| Msa0718770 | Msa1038170 | 0.817897 | 2.598426e-52 | -8.615850e-47 |
| Msa0732040 | Msa1038170 | 0.815260 | 1.012492e-51 | -8.615850e-47 |
| Msa0738680 | Msa1038170 | 0.821678 | 3.553854e-53 | -8.615850e-47 |
| Msa0744710 | Msa1038170 | 0.800357 | 1.496765e-48 | -8.615850e-47 |
| Msa0766170 | Msa1038170 | 0.803527 | 3.340703e-49 | -8.615850e-47 |
| Msa0774660 | Msa1038170 | 0.804540 | 2.056481e-49 | -8.615850e-47 |
| Msa0784780 | Msa1038170 | -0.814056 | 1.870618e-51 | -8.615850e-47 |
| Msa0790030 | Msa1038170 | 0.815380 | 9.523375e-52 | -8.615850e-47 |
| Msa0793270 | Msa1038170 | 0.809921 | 1.489972e-50 | -8.615850e-47 |
| Msa0795320 | Msa1038170 | 0.824784 | 6.691062e-54 | -8.615850e-47 |
| Msa0799120 | Msa1038170 | 0.803120 | 4.055812e-49 | -8.615850e-47 |
| Msa0800490 | Msa1038170 | 0.811882 | 5.603924e-51 | -8.615850e-47 |
| Msa0802600 | Msa1038170 | 0.837999 | 3.730585e-57 | -8.615850e-47 |
| Msa0802610 | Msa1038170 | 0.813217 | 2.862164e-51 | -8.615850e-47 |
| Msa0810340 | Msa1038170 | 0.808885 | 2.485766e-50 | -8.615850e-47 |
| Msa0819150 | Msa1038170 | 0.814070 | 1.857493e-51 | -8.615850e-47 |
| Msa0827800 | Msa1038170 | 0.802600 | 5.195729e-49 | -8.615850e-47 |
| Msa0829990 | Msa1038170 | 0.804579 | 2.018873e-49 | -8.615850e-47 |
| Msa0839530 | Msa1038170 | 0.828210 | 1.020324e-54 | -8.615850e-47 |
| Msa0122930 | Msa1038170 | -0.808954 | 2.402329e-50 | -8.615850e-47 |
| Msa0123960 | Msa1038170 | -0.803399 | 3.551844e-49 | -8.615850e-47 |
| Msa0127510 | Msa1038170 | -0.806902 | 6.565467e-50 | -8.615850e-47 |
| Msa0129770 | Msa1038170 | 0.811979 | 5.337764e-51 | -8.615850e-47 |
| Msa0136090 | Msa1038170 | 0.804669 | 1.933727e-49 | -8.615850e-47 |
| Msa0143640 | Msa1038170 | 0.812107 | 5.006323e-51 | -8.615850e-47 |
| Msa0146200 | Msa1038170 | 0.804526 | 2.070820e-49 | -8.615850e-47 |
| Msa0157740 | Msa1038170 | 0.803105 | 4.085113e-49 | -8.615850e-47 |
| Msa0162170 | Msa1038170 | -0.804046 | 2.606602e-49 | -8.615850e-47 |
| Msa0163690 | Msa1038170 | 0.820978 | 5.154928e-53 | -8.615850e-47 |
| Msa0167160 | Msa1038170 | -0.805086 | 1.581508e-49 | -8.615850e-47 |
| Msa0167570 | Msa1038170 | -0.830542 | 2.769171e-55 | -8.615850e-47 |
| Msa0179830 | Msa1038170 | 0.845143 | 4.879010e-59 | -8.615850e-47 |
| Msa0185040 | Msa1038170 | 0.806884 | 6.620780e-50 | -8.615850e-47 |
| Msa0224180 | Msa1038170 | -0.819168 | 1.338068e-52 | -8.615850e-47 |
| Msa0368620 | Msa1038170 | 0.813405 | 2.602360e-51 | -8.615850e-47 |
| Msa0369990 | Msa1038170 | 0.801568 | 8.470018e-49 | -8.615850e-47 |
| Msa0382050 | Msa1038170 | -0.834014 | 3.829277e-56 | -8.615850e-47 |
| Msa0386230 | Msa1038170 | -0.807495 | 4.916946e-50 | -8.615850e-47 |
| Msa0389710 | Msa1038170 | 0.812189 | 4.803683e-51 | -8.615850e-47 |
| Msa0390760 | Msa1038170 | -0.817147 | 3.834941e-52 | -8.615850e-47 |
| Msa0405200 | Msa1038170 | 0.823200 | 1.574310e-53 | -8.615850e-47 |
| Msa0405210 | Msa1038170 | 0.808930 | 2.431072e-50 | -8.615850e-47 |
| Msa0427560 | Msa1038170 | 0.808541 | 2.944362e-50 | -8.615850e-47 |
| Msa0431550 | Msa1038170 | -0.813710 | 2.230194e-51 | -8.615850e-47 |
| Msa0438070 | Msa1038170 | 0.805595 | 1.237247e-49 | -8.615850e-47 |
| Msa0444770 | Msa1038170 | -0.812862 | 3.423618e-51 | -8.615850e-47 |
| Msa0449490 | Msa1038170 | 0.827565 | 1.458132e-54 | -8.615850e-47 |
| Msa0449500 | Msa1038170 | 0.829856 | 4.072564e-55 | -8.615850e-47 |
| Msa0460600 | Msa1038170 | 0.806755 | 7.050553e-50 | -8.615850e-47 |
| Msa0469770 | Msa1038170 | -0.801416 | 9.097297e-49 | -8.615850e-47 |
| Msa0474660 | Msa1038170 | -0.809850 | 1.543436e-50 | -8.615850e-47 |
| Msa0476560 | Msa1038170 | -0.811386 | 7.184450e-51 | -8.615850e-47 |
| Msa0480260 | Msa1038170 | 0.810187 | 1.305946e-50 | -8.615850e-47 |
| Msa1027910 | Msa1038170 | 0.818915 | 1.527808e-52 | -8.615850e-47 |
| Msa1029860 | Msa1038170 | 0.834551 | 2.808095e-56 | -8.615850e-47 |
| Msa1030210 | Msa1038170 | 0.819279 | 1.262490e-52 | -8.615850e-47 |
| Msa1035050 | Msa1038170 | 0.809604 | 1.743496e-50 | -8.615850e-47 |
| Msa1036260 | Msa1038170 | -0.802132 | 6.486342e-49 | -8.615850e-47 |
| Msa1038170 | Msa1058550 | -0.800745 | 1.247972e-48 | -8.615850e-47 |
| Msa1038170 | Msa1062060 | 0.804358 | 2.244332e-49 | -8.615850e-47 |
| Msa1038170 | Msa1068780 | 0.803119 | 4.057864e-49 | -8.615850e-47 |
| Msa1038170 | Msa1069250 | 0.824112 | 9.630486e-54 | -8.615850e-47 |
| Msa1038170 | Msa1075090 | 0.803482 | 3.413435e-49 | -8.615850e-47 |
| Msa1038170 | Msa1076530 | -0.804297 | 2.311333e-49 | -8.615850e-47 |
| Msa1038170 | Msa1078120 | -0.806985 | 6.303430e-50 | -8.615850e-47 |
| Msa1038170 | Msa1084890 | 0.807134 | 5.863551e-50 | -8.615850e-47 |
| Msa1038170 | Msa1103450 | 0.828520 | 8.591670e-55 | -8.615850e-47 |
| Msa1038170 | Msa1107220 | 0.817353 | 3.445802e-52 | -8.615850e-47 |
| Msa1038170 | Msa1108560 | 0.802108 | 6.559383e-49 | -8.615850e-47 |
| Msa1038170 | Msa1120580 | 0.805860 | 1.088697e-49 | -8.615850e-47 |
| Msa1038170 | Msa1120960 | 0.817824 | 2.699246e-52 | -8.615850e-47 |
| Msa1038170 | Msa1123260 | -0.812046 | 5.163312e-51 | -8.615850e-47 |
| Msa1038170 | Msa1130150 | -0.807821 | 4.191943e-50 | -8.615850e-47 |
| Msa1038170 | Msa1131300 | -0.833457 | 5.275196e-56 | -8.615850e-47 |
| Msa1038170 | Msa1136760 | 0.809128 | 2.205366e-50 | -8.615850e-47 |
| Msa1038170 | Msa1137750 | 0.818079 | 2.364055e-52 | -8.615850e-47 |
| Msa1038170 | Msa1147010 | 0.808579 | 2.890134e-50 | -8.615850e-47 |
| Msa1038170 | Msa1156100 | -0.807932 | 3.970034e-50 | -8.615850e-47 |
| Msa1038170 | Msa1156740 | 0.815448 | 9.198714e-52 | -8.615850e-47 |
| Msa1038170 | Msa1174280 | 0.809225 | 2.102545e-50 | -8.615850e-47 |
| Msa1038170 | Msa1185270 | 0.807899 | 4.034701e-50 | -8.615850e-47 |
| Msa1038170 | Msa1191270 | 0.816972 | 4.197758e-52 | -8.615850e-47 |
| Msa1038170 | Msa1202110 | 0.808561 | 2.915798e-50 | -8.615850e-47 |
| Msa1038170 | Msa1203320 | -0.819735 | 9.934747e-53 | -8.615850e-47 |
| Msa1038170 | Msa1223540 | 0.802743 | 4.853427e-49 | -8.615850e-47 |
| Msa1038170 | Msa1223620 | 0.804130 | 2.503547e-49 | -8.615850e-47 |
| Msa1038170 | Msa1223960 | 0.850182 | 2.003539e-60 | -8.615850e-47 |
| Msa1038170 | Msa1223990 | 0.831592 | 1.529829e-55 | -8.615850e-47 |
| Msa1038170 | Msa1239190 | 0.806850 | 6.733822e-50 | -8.615850e-47 |
| Msa1038170 | Msa1254870 | 0.812550 | 4.007643e-51 | -8.615850e-47 |
| Msa1038170 | Msa1259570 | 0.813835 | 2.092772e-51 | -8.615850e-47 |
| Msa1038170 | Msa1263110 | 0.825204 | 5.323672e-54 | -8.615850e-47 |
| Msa1038170 | Msa1263520 | 0.820221 | 7.691566e-53 | -8.615850e-47 |
| Msa1038170 | Msa1269200 | 0.806934 | 6.463003e-50 | -8.615850e-47 |
| Msa1038170 | Msa1279060 | 0.808136 | 3.591394e-50 | -8.615850e-47 |
| Msa1038170 | Msa1317740 | 0.814082 | 1.846457e-51 | -8.615850e-47 |
| Msa1038170 | Msa1328430 | 0.814252 | 1.693759e-51 | -8.615850e-47 |
| Msa1038170 | Msa1350590 | -0.800143 | 1.654839e-48 | -8.615850e-47 |
| Msa1038170 | Msa1364690 | 0.803962 | 2.713137e-49 | -8.615850e-47 |
| Msa1038170 | Msa1377050 | 0.816265 | 6.044256e-52 | -8.615850e-47 |
| Msa1038170 | Msa1395250 | 0.807348 | 5.280458e-50 | -8.615850e-47 |
| Msa1038170 | Msa1399030 | 0.803597 | 3.230940e-49 | -8.615850e-47 |
| Msa1038170 | Msa1416330 | 0.832207 | 1.078594e-55 | -8.615850e-47 |
| Msa1038170 | Msa1455360 | 0.810444 | 1.149020e-50 | -8.615850e-47 |
| Msa1038170 | Msa1462700 | -0.800997 | 1.108339e-48 | -8.615850e-47 |
| Msa0255770 | Msa1038170 | -0.816103 | 6.572127e-52 | -8.615850e-47 |
| Msa0257760 | Msa1038170 | 0.813382 | 2.632721e-51 | -8.615850e-47 |
| Msa0265650 | Msa1038170 | 0.800760 | 1.238743e-48 | -8.615850e-47 |
| Msa0271700 | Msa1038170 | 0.804591 | 2.007505e-49 | -8.615850e-47 |
| Msa0273070 | Msa1038170 | 0.808846 | 2.533520e-50 | -8.615850e-47 |
| Msa0275730 | Msa1038170 | 0.807332 | 5.323059e-50 | -8.615850e-47 |
| Msa0312300 | Msa1038170 | 0.819433 | 1.164500e-52 | -8.615850e-47 |
| Msa0345050 | Msa1038170 | 0.837783 | 4.239122e-57 | -8.615850e-47 |
| Msa0345890 | Msa1038170 | 0.824405 | 8.216714e-54 | -8.615850e-47 |
| Msa0354600 | Msa1038170 | 0.812445 | 4.224143e-51 | -8.615850e-47 |
| Msa0357550 | Msa1038170 | 0.809671 | 1.686094e-50 | -8.615850e-47 |
| Msa0492330 | Msa1038170 | -0.816292 | 5.962499e-52 | -8.615850e-47 |
| Msa0497680 | Msa1038170 | 0.839903 | 1.199415e-57 | -8.615850e-47 |
| Msa0508160 | Msa1038170 | 0.806132 | 9.542884e-50 | -8.615850e-47 |
| Msa0514630 | Msa1038170 | -0.804614 | 1.984960e-49 | -8.615850e-47 |
| Msa0518190 | Msa1038170 | 0.830254 | 3.257169e-55 | -8.615850e-47 |
| Msa0531050 | Msa1038170 | 0.801916 | 7.183141e-49 | -8.615850e-47 |
| Msa0537960 | Msa1038170 | -0.804831 | 1.788644e-49 | -8.615850e-47 |
| Msa0561830 | Msa1038170 | 0.827166 | 1.817648e-54 | -8.615850e-47 |
| Msa0588040 | Msa1038170 | 0.802380 | 5.766140e-49 | -8.615850e-47 |
| Msa0597800 | Msa1038170 | 0.804114 | 2.523363e-49 | -8.615850e-47 |
| Msa0858250 | Msa1038170 | -0.816486 | 5.393916e-52 | -8.615850e-47 |
| Msa0859270 | Msa1038170 | 0.817125 | 3.877151e-52 | -8.615850e-47 |
| Msa0874750 | Msa1038170 | 0.801138 | 1.037055e-48 | -8.615850e-47 |
| Msa0882480 | Msa1038170 | -0.817634 | 2.978738e-52 | -8.615850e-47 |
| Msa0921790 | Msa1038170 | 0.805630 | 1.216915e-49 | -8.615850e-47 |
| Msa0925940 | Msa1038170 | 0.844685 | 6.487476e-59 | -8.615850e-47 |
| Msa0935840 | Msa1038170 | -0.801769 | 7.701016e-49 | -8.615850e-47 |
| Msa0958960 | Msa1038170 | -0.811857 | 5.675148e-51 | -8.615850e-47 |
| Msa0960580 | Msa1038170 | 0.805548 | 1.265621e-49 | -8.615850e-47 |
| Msa0967540 | Msa1038170 | -0.814192 | 1.745762e-51 | -8.615850e-47 |
| Msa0973010 | Msa1038170 | -0.827482 | 1.526796e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038170 | MtrunA17_Chr7g0274421 | 93.560 | 559 | 26 | 2 | 1 | 559 | 1 | 549 | 0.0 | 1061 |
| Msa1038170 | MtrunA17_Chr1g0190421 | 75.543 | 552 | 121 | 4 | 10 | 559 | 2 | 541 | 0.0 | 842 |
| Msa1038170 | MtrunA17_Chr5g0399211 | 32.692 | 260 | 157 | 8 | 36 | 283 | 50 | 303 | 5.97e-32 | 129 |
| Msa1038170 | MtrunA17_Chr4g0056181 | 30.916 | 262 | 163 | 8 | 34 | 283 | 35 | 290 | 2.65e-28 | 118 |
| Msa1038170 | MtrunA17_Chr3g0129911 | 34.731 | 167 | 108 | 1 | 33 | 198 | 301 | 467 | 1.15e-26 | 114 |
| Msa1038170 | MtrunA17_Chr1g0159301 | 32.961 | 179 | 115 | 4 | 23 | 198 | 299 | 475 | 8.65e-26 | 112 |
| Msa1038170 | MtrunA17_Chr7g0272921 | 35.714 | 168 | 101 | 2 | 38 | 198 | 270 | 437 | 5.50e-24 | 105 |
| Msa1038170 | MtrunA17_Chr1g0153481 | 30.636 | 173 | 119 | 1 | 26 | 197 | 290 | 462 | 9.19e-24 | 105 |
| Msa1038170 | MtrunA17_Chr1g0153471 | 29.834 | 181 | 123 | 2 | 26 | 202 | 286 | 466 | 2.18e-23 | 104 |
| Msa1038170 | MtrunA17_Chr1g0191821 | 34.337 | 166 | 104 | 2 | 38 | 198 | 267 | 432 | 4.61e-23 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038170 | AT5G18480.1 | 67.358 | 530 | 155 | 5 | 31 | 559 | 25 | 537 | 0.0 | 677 |
| Msa1038170 | AT1G08990.1 | 39.655 | 174 | 102 | 3 | 26 | 197 | 267 | 439 | 2.30e-28 | 119 |
| Msa1038170 | AT1G77130.1 | 31.301 | 246 | 145 | 6 | 23 | 263 | 271 | 497 | 3.09e-28 | 119 |
| Msa1038170 | AT4G16600.1 | 31.801 | 261 | 161 | 9 | 34 | 282 | 56 | 311 | 8.55e-27 | 114 |
| Msa1038170 | AT3G18660.3 | 33.333 | 183 | 119 | 2 | 17 | 198 | 299 | 479 | 1.03e-26 | 115 |
| Msa1038170 | AT3G18660.1 | 33.333 | 183 | 119 | 2 | 17 | 198 | 300 | 480 | 1.04e-26 | 115 |
| Msa1038170 | AT3G18660.2 | 33.333 | 183 | 119 | 2 | 17 | 198 | 304 | 484 | 1.05e-26 | 115 |
| Msa1038170 | AT2G35710.1 | 31.034 | 261 | 162 | 8 | 34 | 282 | 60 | 314 | 2.71e-26 | 112 |
| Msa1038170 | AT2G35710.4 | 31.034 | 261 | 162 | 8 | 34 | 282 | 60 | 314 | 3.43e-26 | 109 |
| Msa1038170 | AT1G54940.1 | 36.646 | 161 | 101 | 1 | 38 | 197 | 272 | 432 | 5.24e-24 | 106 |
| Msa1038170 | AT4G33330.1 | 33.537 | 164 | 108 | 1 | 35 | 197 | 299 | 462 | 2.78e-22 | 101 |
| Msa1038170 | AT4G33330.4 | 33.537 | 164 | 108 | 1 | 35 | 197 | 310 | 473 | 3.11e-22 | 101 |
| Msa1038170 | AT4G33330.2 | 33.537 | 164 | 108 | 1 | 35 | 197 | 299 | 462 | 3.42e-22 | 101 |
| Msa1038170 | AT4G33330.5 | 33.537 | 164 | 108 | 1 | 35 | 197 | 231 | 394 | 4.08e-22 | 100 |
| Msa1038170 | AT2G35710.2 | 32.178 | 202 | 125 | 6 | 87 | 282 | 11 | 206 | 3.31e-21 | 96.3 |
| Msa1038170 | AT4G33330.3 | 33.544 | 158 | 104 | 1 | 35 | 191 | 310 | 467 | 6.14e-21 | 96.3 |
| Msa1038170 | AT1G60450.1 | 25.556 | 270 | 137 | 8 | 35 | 263 | 18 | 264 | 9.44e-17 | 82.0 |
| Msa1038170 | AT1G60470.1 | 26.217 | 267 | 133 | 11 | 38 | 263 | 24 | 267 | 2.64e-14 | 74.7 |
| Msa1038170 | AT1G56600.1 | 24.731 | 279 | 138 | 9 | 30 | 263 | 15 | 266 | 1.17e-12 | 69.7 |
Find 145 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATGTTTATTGTATTATT+TGG | 0.112274 | 7_1:+74964252 | Msa1038170:CDS |
| GAAAATAGTCATTAGGATTT+TGG | 0.140955 | 7_1:-74963452 | None:intergenic |
| CAAAACAACCATGTGTTTAT+TGG | 0.172219 | 7_1:-74961738 | None:intergenic |
| GGATATATTTATTTATTTAA+AGG | 0.181504 | 7_1:-74961482 | None:intergenic |
| CTCGTCACTTCCTGAGTCTT+TGG | 0.182248 | 7_1:+74964332 | Msa1038170:CDS |
| GAGTCTTTGGATTATGATTC+TGG | 0.187029 | 7_1:+74964345 | Msa1038170:CDS |
| GTGTTCGTCCTAAGAGATTT+TGG | 0.201254 | 7_1:+74961931 | Msa1038170:CDS |
| GGTCTGGATTTCAACTCTTC+TGG | 0.218207 | 7_1:-74962445 | None:intergenic |
| GTGCAAGGTTCCTACGTATT+TGG | 0.227052 | 7_1:+74964107 | Msa1038170:CDS |
| GTGGGGTTCTTCAGGATGTT+AGG | 0.229561 | 7_1:+74963391 | Msa1038170:intron |
| GTTGATAGTCTCTCCATTTC+CGG | 0.233884 | 7_1:-74962472 | None:intergenic |
| TTCTGTCTGTTTCTGTTTAA+CGG | 0.247943 | 7_1:+74964137 | Msa1038170:CDS |
| CTTCAATTCCAAACTTGTTT+AGG | 0.250138 | 7_1:+74961614 | Msa1038170:CDS |
| CAGCTTGGGGAGTCCCTTCC+TGG | 0.263990 | 7_1:+74963417 | Msa1038170:CDS |
| CAATAAACACATGGTTGTTT+TGG | 0.272587 | 7_1:+74961739 | Msa1038170:CDS |
| GTACGGAGATGAATTCTTAT+TGG | 0.277493 | 7_1:+74961676 | Msa1038170:CDS |
| AACTCTTCTGGGGACAAGTT+TGG | 0.282864 | 7_1:-74962433 | None:intergenic |
| GTTATCTTCATTTGGTTTAT+CGG | 0.283666 | 7_1:+74964277 | Msa1038170:CDS |
| ATGAAACACAGGCTCCTATT+TGG | 0.301950 | 7_1:-74965343 | None:intergenic |
| TAGATCCTCCTAAACAAGTT+TGG | 0.315422 | 7_1:-74961622 | None:intergenic |
| ATTTGGAGGTTATCTTCATT+TGG | 0.317707 | 7_1:+74964269 | Msa1038170:CDS |
| GCTATCCGGTCATTCCTAAA+AGG | 0.323926 | 7_1:+74965298 | Msa1038170:CDS |
| GCTACATGGTACTATGGATT+AGG | 0.330001 | 7_1:+74964511 | Msa1038170:CDS |
| CTCCATTTCCGGAACAGGTC+TGG | 0.335358 | 7_1:-74962461 | None:intergenic |
| TGCAAGGTTCCTACGTATTT+GGG | 0.336360 | 7_1:+74964108 | Msa1038170:CDS |
| TTGATCTAATCTTATAATAA+AGG | 0.339906 | 7_1:-74963694 | None:intergenic |
| TACGGAGATGAATTCTTATT+GGG | 0.353403 | 7_1:+74961677 | Msa1038170:CDS |
| TTCACAAGAAAATAGTCATT+AGG | 0.353485 | 7_1:-74963459 | None:intergenic |
| TTATTGGGCGTTCGTGTTCT+CGG | 0.354632 | 7_1:+74961692 | Msa1038170:CDS |
| CTTGGGACTGGTGGACATCT+TGG | 0.360363 | 7_1:+74963221 | Msa1038170:CDS |
| CGCCAACTGATTCTACTGTT+TGG | 0.368147 | 7_1:-74961554 | None:intergenic |
| GGTTAGGTTTGATGGTTGTC+GGG | 0.371768 | 7_1:+74965230 | Msa1038170:intron |
| CTCTTAGGACGAACACGATT+AGG | 0.374110 | 7_1:-74961924 | None:intergenic |
| CAGTCCACGGCATCACTTGC+CGG | 0.376274 | 7_1:-74964200 | None:intergenic |
| ATCCAGACCTGTTCCGGAAA+TGG | 0.383357 | 7_1:+74962459 | Msa1038170:CDS |
| GTTGAAATCCAGACCTGTTC+CGG | 0.386303 | 7_1:+74962453 | Msa1038170:CDS |
| ACGGCTGCTGTGGTGTCTCT+TGG | 0.387385 | 7_1:+74964156 | Msa1038170:CDS |
| CCACCAGTCCCAAGGCTTAA+GGG | 0.387655 | 7_1:-74963212 | None:intergenic |
| AGGTTAGGTTTGATGGTTGT+CGG | 0.394243 | 7_1:+74965229 | Msa1038170:intron |
| GTCTGGATTTCAACTCTTCT+GGG | 0.395720 | 7_1:-74962444 | None:intergenic |
| TAGAACAACAATACAAATCT+AGG | 0.397919 | 7_1:-74965438 | None:intergenic |
| ATTGGGAAAGTCAGAGTAAT+AGG | 0.399496 | 7_1:-74962395 | None:intergenic |
| AGTCTCTCCATTTCCGGAAC+AGG | 0.401528 | 7_1:-74962466 | None:intergenic |
| TAAACACCCCAAAATCTCTT+AGG | 0.401974 | 7_1:-74961939 | None:intergenic |
| CTAGTTGAAGATGTAAATAA+AGG | 0.402579 | 7_1:+74965458 | Msa1038170:three_prime_UTR |
| AGGATGTTAGGGAACAGCTT+GGG | 0.405735 | 7_1:+74963403 | Msa1038170:intron |
| TCCACCAGTCCCAAGGCTTA+AGG | 0.409126 | 7_1:-74963213 | None:intergenic |
| TTTCAGTCGTCTCTGACCTT+CGG | 0.409977 | 7_1:-74961405 | None:intergenic |
| ATTACCTGCCAGACATCAAC+AGG | 0.412860 | 7_1:-74963253 | None:intergenic |
| ATGTATCATTGTATTTGCTT+AGG | 0.416458 | 7_1:+74965492 | Msa1038170:three_prime_UTR |
| CTACATGGTACTATGGATTA+GGG | 0.420664 | 7_1:+74964512 | Msa1038170:CDS |
| TGGATTAGGGATGGCCTTGT+TGG | 0.421428 | 7_1:+74964525 | Msa1038170:CDS |
| GATACTGCTACATGGTACTA+TGG | 0.427566 | 7_1:+74964505 | Msa1038170:CDS |
| TGGGGTTCTTCAGGATGTTA+GGG | 0.430964 | 7_1:+74963392 | Msa1038170:intron |
| ATTATCCCTCTTGTTTCCGT+TGG | 0.431578 | 7_1:-74961503 | None:intergenic |
| TTATTTATTTAAAGGAAAGT+TGG | 0.431720 | 7_1:-74961474 | None:intergenic |
| CTCTGACCTTCGGTCACCAC+TGG | 0.435511 | 7_1:-74961395 | None:intergenic |
| AACCATGTGTTTATTGGATC+TGG | 0.436495 | 7_1:-74961732 | None:intergenic |
| CATTCTGAGAGGTTGAATTC+CGG | 0.440137 | 7_1:+74962186 | Msa1038170:CDS |
| TTATTCTTTCAAAATCTAGT+TGG | 0.442653 | 7_1:+74965537 | Msa1038170:three_prime_UTR |
| CACTGGGACCCCTTAAGCCT+TGG | 0.445458 | 7_1:+74963203 | Msa1038170:CDS |
| AGTCCACGGCATCACTTGCC+GGG | 0.455569 | 7_1:-74964199 | None:intergenic |
| AGTGGGATATTGCTCCAAAT+AGG | 0.456014 | 7_1:+74965329 | Msa1038170:CDS |
| ATTGGATCTGGTGTCGCGTA+TGG | 0.460416 | 7_1:-74961720 | None:intergenic |
| CGGCAAGTGATGCCGTGGAC+TGG | 0.461514 | 7_1:+74964201 | Msa1038170:CDS |
| TCTTCATTTGGTTTATCGGT+GGG | 0.463764 | 7_1:+74964281 | Msa1038170:CDS |
| CTGCTATAATTCACTTATGA+AGG | 0.468846 | 7_1:+74963521 | Msa1038170:CDS |
| GATGTTGAGATAGTTGTATA+AGG | 0.472611 | 7_1:-74963728 | None:intergenic |
| ATGTTTATTGTATTATTTGG+AGG | 0.476336 | 7_1:+74964255 | Msa1038170:CDS |
| CATATTAAGATTTGTTTCGA+TGG | 0.477072 | 7_1:+74964057 | Msa1038170:intron |
| GCCGCCTCTTGTTCCAGGAA+GGG | 0.477864 | 7_1:-74963430 | None:intergenic |
| CTTCTGAACATCTTGCTATC+CGG | 0.479536 | 7_1:+74965284 | Msa1038170:CDS |
| GAGGTTGAATTCCGGAGTTA+TGG | 0.484212 | 7_1:+74962194 | Msa1038170:CDS |
| ATCTTCATTTGGTTTATCGG+TGG | 0.485026 | 7_1:+74964280 | Msa1038170:CDS |
| AGGAATCAATTCAATCCATC+AGG | 0.487708 | 7_1:+74963751 | Msa1038170:CDS |
| GGGATGGCCTTGTTGGCCAT+TGG | 0.489010 | 7_1:+74964532 | Msa1038170:CDS |
| GACCCCTTAAGCCTTGGGAC+TGG | 0.492980 | 7_1:+74963209 | Msa1038170:CDS |
| ATAATAAGCGGTGATGTAAA+CGG | 0.494535 | 7_1:+74965381 | Msa1038170:three_prime_UTR |
| CAATTCCAAACTTGTTTAGG+AGG | 0.494538 | 7_1:+74961617 | Msa1038170:CDS |
| ATAATAAAGCACAGAATGGT+AGG | 0.502328 | 7_1:-74963494 | None:intergenic |
| TTGCAGAATCGAGAGTACTT+TGG | 0.502931 | 7_1:+74963632 | Msa1038170:intron |
| GAGATAGTTGTATAAGGAAG+TGG | 0.503037 | 7_1:-74963722 | None:intergenic |
| GGCCGCCTCTTGTTCCAGGA+AGG | 0.503271 | 7_1:-74963431 | None:intergenic |
| ACTGGGACCCCTTAAGCCTT+GGG | 0.507201 | 7_1:+74963204 | Msa1038170:CDS |
| CCCTTAAGCCTTGGGACTGG+TGG | 0.507393 | 7_1:+74963212 | Msa1038170:CDS |
| AGGCACAATTCTGTCGGGTA+AGG | 0.509918 | 7_1:-74965560 | None:intergenic |
| GCTCCCTATGTGATCAAGTC+AGG | 0.510268 | 7_1:+74963669 | Msa1038170:CDS |
| TATACAACTATCTCAACATC+AGG | 0.514583 | 7_1:+74963731 | Msa1038170:CDS |
| TATTATAAGATTAGATCAAG+TGG | 0.524639 | 7_1:+74963698 | Msa1038170:CDS |
| CTTCATTTGGTTTATCGGTG+GGG | 0.530069 | 7_1:+74964282 | Msa1038170:CDS |
| AGGACGAACACGATTAGGAT+TGG | 0.530654 | 7_1:-74961919 | None:intergenic |
| CCTCGATGCCGATACTATTG+TGG | 0.530695 | 7_1:+74962110 | Msa1038170:CDS |
| CTCGAATGGTTCTCAGTGCA+AGG | 0.544103 | 7_1:+74964092 | Msa1038170:CDS |
| GTGCCTGACTTGATCACATA+GGG | 0.545198 | 7_1:-74963672 | None:intergenic |
| TTCCCCGGCAAGTGATGCCG+TGG | 0.546088 | 7_1:+74964196 | Msa1038170:CDS |
| GTTAGGTTTGATGGTTGTCG+GGG | 0.547123 | 7_1:+74965231 | Msa1038170:CDS |
| GAAACCTGTTGATGTCTGGC+AGG | 0.547142 | 7_1:+74963249 | Msa1038170:CDS |
| CAGGATGTTAGGGAACAGCT+TGG | 0.547351 | 7_1:+74963402 | Msa1038170:intron |
| TAGAATAATAAAGCACAGAA+TGG | 0.551207 | 7_1:-74963498 | None:intergenic |
| TAGCTCTCTTGATTGTTCCC+CGG | 0.552382 | 7_1:+74964181 | Msa1038170:CDS |
| TGGAGCACCAATGGCCAACA+AGG | 0.554201 | 7_1:-74964539 | None:intergenic |
| AGGCAAAGATGGAGCACCAA+TGG | 0.558429 | 7_1:-74964548 | None:intergenic |
| ACATTGTATAATGCAGATGT+TGG | 0.559822 | 7_1:+74962493 | Msa1038170:CDS |
| GGATGTTAGGGAACAGCTTG+GGG | 0.560129 | 7_1:+74963404 | Msa1038170:intron |
| CGTGTGATTCACTATACACT+GGG | 0.562412 | 7_1:+74963187 | Msa1038170:CDS |
| TCCCTTCCTGGAACAAGAGG+CGG | 0.563395 | 7_1:+74963429 | Msa1038170:CDS |
| TCTTTACATGCTCGCTAACA+AGG | 0.564106 | 7_1:+74962516 | Msa1038170:CDS |
| GTGTGTTGCAGGCTGATGGT+TGG | 0.566359 | 7_1:+74961871 | Msa1038170:intron |
| CCGTGTGATTCACTATACAC+TGG | 0.569851 | 7_1:+74963186 | Msa1038170:CDS |
| GAATCATAATCCAAAGACTC+AGG | 0.570217 | 7_1:-74964342 | None:intergenic |
| CACCAGTCCCAAGGCTTAAG+GGG | 0.573084 | 7_1:-74963211 | None:intergenic |
| CATCATGTGATACTGCTACA+TGG | 0.577497 | 7_1:+74964497 | Msa1038170:CDS |
| GGTGTCAAGCAGCTCTCGAA+TGG | 0.582811 | 7_1:+74964078 | Msa1038170:CDS |
| GAGTCCCTTCCTGGAACAAG+AGG | 0.585313 | 7_1:+74963426 | Msa1038170:CDS |
| TCCTAAAAGGACTTGATGAG+TGG | 0.590262 | 7_1:+74965311 | Msa1038170:CDS |
| CCTAAAAGGACTTGATGAGT+GGG | 0.598813 | 7_1:+74965312 | Msa1038170:CDS |
| GTTGAATTCCGGAGTTATGG+TGG | 0.600129 | 7_1:+74962197 | Msa1038170:CDS |
| TATATCCAACGGAAACAAGA+GGG | 0.602807 | 7_1:+74961498 | Msa1038170:five_prime_UTR |
| GAATAATACTGACACGGAGG+AGG | 0.604529 | 7_1:-74961793 | None:intergenic |
| ATCAAAAGCAAACCAGTCCA+CGG | 0.610095 | 7_1:-74964213 | None:intergenic |
| AGATGCACGCACGCAGCCAG+TGG | 0.613650 | 7_1:+74961379 | Msa1038170:five_prime_UTR |
| TTTCTGTTTAACGGCTGCTG+TGG | 0.614224 | 7_1:+74964146 | Msa1038170:CDS |
| CAAGATGTCCACCAGTCCCA+AGG | 0.614633 | 7_1:-74963220 | None:intergenic |
| AAAACTACTAAATCTTACAC+CGG | 0.615106 | 7_1:+74962264 | Msa1038170:CDS |
| ATATATCCAACGGAAACAAG+AGG | 0.615931 | 7_1:+74961497 | Msa1038170:five_prime_UTR |
| AAAATCAACATATGAAACAC+AGG | 0.615989 | 7_1:-74965354 | None:intergenic |
| GGTGCCTGACTTGATCACAT+AGG | 0.616621 | 7_1:-74963673 | None:intergenic |
| TCTGGATTTCAACTCTTCTG+GGG | 0.623762 | 7_1:-74962443 | None:intergenic |
| AAATAAATAAATATATCCAA+CGG | 0.625256 | 7_1:+74961487 | Msa1038170:five_prime_UTR |
| CACCAGATCCAATAAACACA+TGG | 0.629948 | 7_1:+74961730 | Msa1038170:CDS |
| ACGCAGCCAGTGGTGACCGA+AGG | 0.632731 | 7_1:+74961389 | Msa1038170:five_prime_UTR |
| AAGGTTCCTACGTATTTGGG+TGG | 0.637974 | 7_1:+74964111 | Msa1038170:CDS |
| ATGGTACTATGGATTAGGGA+TGG | 0.639457 | 7_1:+74964516 | Msa1038170:CDS |
| GAAATACCACCCAAATACGT+AGG | 0.642835 | 7_1:-74964117 | None:intergenic |
| TGGCTCGACCACCATAACTC+CGG | 0.646787 | 7_1:-74962205 | None:intergenic |
| AACCAAACAGTAGAATCAGT+TGG | 0.648274 | 7_1:+74961552 | Msa1038170:CDS |
| TTAGGTTTGATGGTTGTCGG+GGG | 0.659292 | 7_1:+74965232 | Msa1038170:CDS |
| TTATCGGTGGGGAAAACATG+TGG | 0.662735 | 7_1:+74964293 | Msa1038170:CDS |
| GTCCACGGCATCACTTGCCG+GGG | 0.666206 | 7_1:-74964198 | None:intergenic |
| ACTACTAAATCTTACACCGG+AGG | 0.674410 | 7_1:+74962267 | Msa1038170:CDS |
| CAAAGACTCAGGAAGTGACG+AGG | 0.676512 | 7_1:-74964331 | None:intergenic |
| CCACAATAGTATCGGCATCG+AGG | 0.695118 | 7_1:-74962110 | None:intergenic |
| CCAGTGTATAGTGAATCACA+CGG | 0.701291 | 7_1:-74963186 | None:intergenic |
| CTAATTTGAAGCATTCTGAG+AGG | 0.701754 | 7_1:+74962175 | Msa1038170:CDS |
| ATAAGCGGTGATGTAAACGG+TGG | 0.756884 | 7_1:+74965384 | Msa1038170:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGATATATTTATTTATTTAA+AGG | - | chr7_1:74961485-74961504 | None:intergenic | 10.0% |
| !! | AAATAAATAAATATATCCAA+CGG | + | chr7_1:74961487-74961506 | Msa1038170:five_prime_UTR | 10.0% |
| !!! | ATTAAAGTTTGATTTATTTA+TGG | + | chr7_1:74961843-74961862 | Msa1038170:intron | 10.0% |
| !! | GTTAAAATTACAAAAATAAA+TGG | - | chr7_1:74965209-74965228 | None:intergenic | 10.0% |
| !!! | TTTATTTTTGTAATTTTAAC+AGG | + | chr7_1:74965209-74965228 | Msa1038170:intron | 10.0% |
| !! | TTATTTATTTAAAGGAAAGT+TGG | - | chr7_1:74961477-74961496 | None:intergenic | 15.0% |
| !! | TTGATCTAATCTTATAATAA+AGG | - | chr7_1:74963697-74963716 | None:intergenic | 15.0% |
| !! | ACAATGTTTATTGTATTATT+TGG | + | chr7_1:74964252-74964271 | Msa1038170:CDS | 15.0% |
| !! | TTAATTTATACTGTATTTAC+AGG | + | chr7_1:74964457-74964476 | Msa1038170:intron | 15.0% |
| !! | TATATCGAAATTATAAAAGT+TGG | - | chr7_1:74964845-74964864 | None:intergenic | 15.0% |
| !!! | TTGATTTTTGTAATAATAAG+CGG | + | chr7_1:74965369-74965388 | Msa1038170:exon | 15.0% |
| !!! | ATTGTTACCTTTTTTGTAAT+TGG | - | chr7_1:74961991-74962010 | None:intergenic | 20.0% |
| !! | TACAAAAAAGGTAACAATTA+AGG | + | chr7_1:74961993-74962012 | Msa1038170:intron | 20.0% |
| !!! | ATTTTTAACCACAATAGTAT+CGG | - | chr7_1:74962121-74962140 | None:intergenic | 20.0% |
| !! | TAAGCATATAAATCATAATG+AGG | - | chr7_1:74962639-74962658 | None:intergenic | 20.0% |
| !! | TAATAGTTAGAATACAGTAT+GGG | + | chr7_1:74962839-74962858 | Msa1038170:intron | 20.0% |
| !! | AATGAAATAAAAATGCATGA+GGG | - | chr7_1:74962999-74963018 | None:intergenic | 20.0% |
| !! | TAATGAAATAAAAATGCATG+AGG | - | chr7_1:74963000-74963019 | None:intergenic | 20.0% |
| !! | AAATATATGTATATGTCTCT+CGG | + | chr7_1:74963080-74963099 | Msa1038170:intron | 20.0% |
| !! | TTAGATAATCTGAATTGAAA+AGG | - | chr7_1:74963110-74963129 | None:intergenic | 20.0% |
| !! | TGTTATTAATGTTGTAAAAG+AGG | + | chr7_1:74963291-74963310 | Msa1038170:intron | 20.0% |
| !! | TATTATAAGATTAGATCAAG+TGG | + | chr7_1:74963698-74963717 | Msa1038170:CDS | 20.0% |
| !! | ATGTTTATTGTATTATTTGG+AGG | + | chr7_1:74964255-74964274 | Msa1038170:CDS | 20.0% |
| !!! | AAATACTTCAAACCTTTTTT+AGG | + | chr7_1:74964669-74964688 | Msa1038170:intron | 20.0% |
| !!! | AATACTTCAAACCTTTTTTA+GGG | + | chr7_1:74964670-74964689 | Msa1038170:intron | 20.0% |
| !!! | CGATATATTACAGTTAATTT+TGG | + | chr7_1:74964858-74964877 | Msa1038170:intron | 20.0% |
| !!! | TATATTACAGTTAATTTTGG+TGG | + | chr7_1:74964861-74964880 | Msa1038170:intron | 20.0% |
| !!! | TTGTACTTTTTAATAAGTTG+TGG | + | chr7_1:74964944-74964963 | Msa1038170:intron | 20.0% |
| !!! | TTTTGTAATTTTAACAGGTT+AGG | + | chr7_1:74965214-74965233 | Msa1038170:intron | 20.0% |
| !! | TTATTCTTTCAAAATCTAGT+TGG | + | chr7_1:74965537-74965556 | Msa1038170:three_prime_UTR | 20.0% |
| ! | AAGAAAGAATAATACTGACA+CGG | - | chr7_1:74961802-74961821 | None:intergenic | 25.0% |
| ! | AACATGACCAATTACAAAAA+AGG | + | chr7_1:74961981-74962000 | Msa1038170:CDS | 25.0% |
| !!! | GTTTTCTTCTTGTTGATTAT+TGG | + | chr7_1:74962051-74962070 | Msa1038170:intron | 25.0% |
| !!! | TTGATGATCTTTTCAAATGT+CGG | + | chr7_1:74962142-74962161 | Msa1038170:CDS | 25.0% |
| ! | AAAACTACTAAATCTTACAC+CGG | + | chr7_1:74962264-74962283 | Msa1038170:CDS | 25.0% |
| !!! | CAAAAAATTGTTTTTACCTC+CGG | - | chr7_1:74962286-74962305 | None:intergenic | 25.0% |
| ! | TCAATTTCAGATTGTTAGTT+TGG | + | chr7_1:74962310-74962329 | Msa1038170:intron | 25.0% |
| !! | CAATTTCAGATTGTTAGTTT+GGG | + | chr7_1:74962311-74962330 | Msa1038170:intron | 25.0% |
| ! | GTAATAGTTAGAATACAGTA+TGG | + | chr7_1:74962838-74962857 | Msa1038170:intron | 25.0% |
| ! | ATCTATATCAGTATTCTCAA+AGG | + | chr7_1:74962871-74962890 | Msa1038170:intron | 25.0% |
| ! | AGTATTCTCAAAGGATTTAT+CGG | + | chr7_1:74962880-74962899 | Msa1038170:intron | 25.0% |
| !!! | TATCTCAGTGTCTTATTTTT+AGG | + | chr7_1:74962939-74962958 | Msa1038170:intron | 25.0% |
| !!! | ATCTCAGTGTCTTATTTTTA+GGG | + | chr7_1:74962940-74962959 | Msa1038170:intron | 25.0% |
| ! | ATGAAATAAAAATGCATGAG+GGG | - | chr7_1:74962998-74963017 | None:intergenic | 25.0% |
| !! | TTTTGTCACAAGATTTAACT+GGG | - | chr7_1:74963343-74963362 | None:intergenic | 25.0% |
| !! | GAAAATAGTCATTAGGATTT+TGG | - | chr7_1:74963455-74963474 | None:intergenic | 25.0% |
| ! | TTCACAAGAAAATAGTCATT+AGG | - | chr7_1:74963462-74963481 | None:intergenic | 25.0% |
| ! | TAGAATAATAAAGCACAGAA+TGG | - | chr7_1:74963501-74963520 | None:intergenic | 25.0% |
| !! | CATATTAAGATTTGTTTCGA+TGG | + | chr7_1:74964057-74964076 | Msa1038170:intron | 25.0% |
| !! | GTTATCTTCATTTGGTTTAT+CGG | + | chr7_1:74964277-74964296 | Msa1038170:CDS | 25.0% |
| !! | TGAAATTTTCACCCTAAAAA+AGG | - | chr7_1:74964684-74964703 | None:intergenic | 25.0% |
| ! | TTGTGATTCAACATTTAAAG+AGG | + | chr7_1:74964791-74964810 | Msa1038170:intron | 25.0% |
| ! | AAAATCAACATATGAAACAC+AGG | - | chr7_1:74965357-74965376 | None:intergenic | 25.0% |
| ! | TAGAACAACAATACAAATCT+AGG | - | chr7_1:74965441-74965460 | None:intergenic | 25.0% |
| ! | CTAGTTGAAGATGTAAATAA+AGG | + | chr7_1:74965458-74965477 | Msa1038170:three_prime_UTR | 25.0% |
| ! | ATGTATCATTGTATTTGCTT+AGG | + | chr7_1:74965492-74965511 | Msa1038170:three_prime_UTR | 25.0% |
| ! | CTTCAATTCCAAACTTGTTT+AGG | + | chr7_1:74961614-74961633 | Msa1038170:CDS | 30.0% |
| TACGGAGATGAATTCTTATT+GGG | + | chr7_1:74961677-74961696 | Msa1038170:CDS | 30.0% | |
| CAAAACAACCATGTGTTTAT+TGG | - | chr7_1:74961741-74961760 | None:intergenic | 30.0% | |
| ! | CAATAAACACATGGTTGTTT+TGG | + | chr7_1:74961739-74961758 | Msa1038170:CDS | 30.0% |
| ! | TCTTCTTGTTGATTATTGGT+TGG | + | chr7_1:74962055-74962074 | Msa1038170:intron | 30.0% |
| TCGTTAAAAAGAGTTTCAGA+TGG | - | chr7_1:74962228-74962247 | None:intergenic | 30.0% | |
| ! | TGAAACTCTTTTTAACGACA+TGG | + | chr7_1:74962230-74962249 | Msa1038170:CDS | 30.0% |
| ACATTGTATAATGCAGATGT+TGG | + | chr7_1:74962493-74962512 | Msa1038170:CDS | 30.0% | |
| TTAAGTAATTAGAGTCACTG+AGG | + | chr7_1:74962586-74962605 | Msa1038170:intron | 30.0% | |
| GATAAGATAGAATGTATGCT+AGG | + | chr7_1:74962669-74962688 | Msa1038170:intron | 30.0% | |
| ATTTGCCTAATGGCTAAAAA+TGG | + | chr7_1:74962746-74962765 | Msa1038170:intron | 30.0% | |
| CTAACTATTACAGACAATAC+CGG | - | chr7_1:74962829-74962848 | None:intergenic | 30.0% | |
| CATTAATAACAGACCAAAAG+AGG | - | chr7_1:74963282-74963301 | None:intergenic | 30.0% | |
| ! | CTTTTGTCACAAGATTTAAC+TGG | - | chr7_1:74963344-74963363 | None:intergenic | 30.0% |
| ATAATAAAGCACAGAATGGT+AGG | - | chr7_1:74963497-74963516 | None:intergenic | 30.0% | |
| CTGCTATAATTCACTTATGA+AGG | + | chr7_1:74963521-74963540 | Msa1038170:CDS | 30.0% | |
| !! | TACTTTGGTTCATTTTGTAG+AGG | + | chr7_1:74963647-74963666 | Msa1038170:CDS | 30.0% |
| GATGTTGAGATAGTTGTATA+AGG | - | chr7_1:74963731-74963750 | None:intergenic | 30.0% | |
| TATACAACTATCTCAACATC+AGG | + | chr7_1:74963731-74963750 | Msa1038170:CDS | 30.0% | |
| TCTACCTCATCAAAATCAAA+TGG | - | chr7_1:74963842-74963861 | None:intergenic | 30.0% | |
| ATGTCATGGATTCAAATAAC+AGG | + | chr7_1:74963986-74964005 | Msa1038170:intron | 30.0% | |
| !! | TTCTGTCTGTTTCTGTTTAA+CGG | + | chr7_1:74964137-74964156 | Msa1038170:CDS | 30.0% |
| !! | GTTTGCTTTTGATGTATGAA+TGG | + | chr7_1:74964223-74964242 | Msa1038170:CDS | 30.0% |
| ATTTGGAGGTTATCTTCATT+TGG | + | chr7_1:74964269-74964288 | Msa1038170:CDS | 30.0% | |
| !!! | GAATAACTGCCTTGTTTTTA+AGG | + | chr7_1:74964581-74964600 | Msa1038170:CDS | 30.0% |
| AATTCGCGTTCTAATGTATT+AGG | + | chr7_1:74964605-74964624 | Msa1038170:intron | 30.0% | |
| AAAACAGTACATGTGTATAG+AGG | - | chr7_1:74964887-74964906 | None:intergenic | 30.0% | |
| ! | CTATACACATGTACTGTTTT+CGG | + | chr7_1:74964887-74964906 | Msa1038170:intron | 30.0% |
| CTTTCACATTACATCTCTTA+GGG | - | chr7_1:74965014-74965033 | None:intergenic | 30.0% | |
| TACTGAGAATTGAGAGAAAA+GGG | - | chr7_1:74965090-74965109 | None:intergenic | 30.0% | |
| ATACTGAGAATTGAGAGAAA+AGG | - | chr7_1:74965091-74965110 | None:intergenic | 30.0% | |
| ! | TTTTAACAGGTTAGGTTTGA+TGG | + | chr7_1:74965222-74965241 | Msa1038170:intron | 30.0% |
| ATAATAAGCGGTGATGTAAA+CGG | + | chr7_1:74965381-74965400 | Msa1038170:three_prime_UTR | 30.0% | |
| ATATATCCAACGGAAACAAG+AGG | + | chr7_1:74961497-74961516 | Msa1038170:five_prime_UTR | 35.0% | |
| TATATCCAACGGAAACAAGA+GGG | + | chr7_1:74961498-74961517 | Msa1038170:five_prime_UTR | 35.0% | |
| AACCAAACAGTAGAATCAGT+TGG | + | chr7_1:74961552-74961571 | Msa1038170:CDS | 35.0% | |
| ! | CAATTCCAAACTTGTTTAGG+AGG | + | chr7_1:74961617-74961636 | Msa1038170:CDS | 35.0% |
| TAGATCCTCCTAAACAAGTT+TGG | - | chr7_1:74961625-74961644 | None:intergenic | 35.0% | |
| ! | GCATACGTTACTCTTTTGTA+CGG | + | chr7_1:74961659-74961678 | Msa1038170:CDS | 35.0% |
| GTACGGAGATGAATTCTTAT+TGG | + | chr7_1:74961676-74961695 | Msa1038170:CDS | 35.0% | |
| AACCATGTGTTTATTGGATC+TGG | - | chr7_1:74961735-74961754 | None:intergenic | 35.0% | |
| AAAGAATAATACTGACACGG+AGG | - | chr7_1:74961799-74961818 | None:intergenic | 35.0% | |
| ! | TTATGGTTTTTGTGTGTTGC+AGG | + | chr7_1:74961860-74961879 | Msa1038170:intron | 35.0% |
| ! | TGTTCGTCCTAAGAGATTTT+GGG | + | chr7_1:74961932-74961951 | Msa1038170:CDS | 35.0% |
| TAAACACCCCAAAATCTCTT+AGG | - | chr7_1:74961942-74961961 | None:intergenic | 35.0% | |
| ! | CTAATTTGAAGCATTCTGAG+AGG | + | chr7_1:74962175-74962194 | Msa1038170:CDS | 35.0% |
| AAGAAACACAGTTGAAGACA+AGG | - | chr7_1:74962344-74962363 | None:intergenic | 35.0% | |
| ATTGGGAAAGTCAGAGTAAT+AGG | - | chr7_1:74962398-74962417 | None:intergenic | 35.0% | |
| ATTACTTAAGTTACGACACG+AGG | - | chr7_1:74962575-74962594 | None:intergenic | 35.0% | |
| CATTAGGCAAATGTAACTGT+GGG | - | chr7_1:74962738-74962757 | None:intergenic | 35.0% | |
| !!! | CAATGCCATTTTTAGCCATT+AGG | - | chr7_1:74962754-74962773 | None:intergenic | 35.0% |
| ATTCTCAAAGGATTTATCGG+TGG | + | chr7_1:74962883-74962902 | Msa1038170:intron | 35.0% | |
| !!! | TTATTTTTAGGGCACCTTGT+CGG | + | chr7_1:74962951-74962970 | Msa1038170:intron | 35.0% |
| !!! | TTTTGAAACCTGTTGATGTC+TGG | + | chr7_1:74963245-74963264 | Msa1038170:CDS | 35.0% |
| TGACGTATTTCTTCTTACCT+TGG | + | chr7_1:74963369-74963388 | Msa1038170:intron | 35.0% | |
| GTATTTCTTCTTACCTTGGT+GGG | + | chr7_1:74963373-74963392 | Msa1038170:intron | 35.0% | |
| TATTTCTTCTTACCTTGGTG+GGG | + | chr7_1:74963374-74963393 | Msa1038170:intron | 35.0% | |
| ATGTGCTTAATGCTTGAGAT+TGG | - | chr7_1:74963578-74963597 | None:intergenic | 35.0% | |
| ATCTCAAGCATTAAGCACAT+AGG | + | chr7_1:74963578-74963597 | Msa1038170:intron | 35.0% | |
| TCTCAAGCATTAAGCACATA+GGG | + | chr7_1:74963579-74963598 | Msa1038170:intron | 35.0% | |
| GAGATAGTTGTATAAGGAAG+TGG | - | chr7_1:74963725-74963744 | None:intergenic | 35.0% | |
| AGGAATCAATTCAATCCATC+AGG | + | chr7_1:74963751-74963770 | Msa1038170:CDS | 35.0% | |
| ATCAATTCAATCCATCAGGT+TGG | + | chr7_1:74963755-74963774 | Msa1038170:intron | 35.0% | |
| ! | GATGATCCAAATCTAAAACC+AGG | - | chr7_1:74963793-74963812 | None:intergenic | 35.0% |
| GATTTGGATCATCTCATTTG+AGG | + | chr7_1:74963800-74963819 | Msa1038170:intron | 35.0% | |
| CAAATGGCTAGATCATATGA+AGG | - | chr7_1:74963826-74963845 | None:intergenic | 35.0% | |
| !! | CTAGCCATTTGATTTTGATG+AGG | + | chr7_1:74963835-74963854 | Msa1038170:intron | 35.0% |
| ACTACTATCATCAAATGACC+TGG | + | chr7_1:74963952-74963971 | Msa1038170:intron | 35.0% | |
| ! | ATCTTCATTTGGTTTATCGG+TGG | + | chr7_1:74964280-74964299 | Msa1038170:CDS | 35.0% |
| ! | TCTTCATTTGGTTTATCGGT+GGG | + | chr7_1:74964281-74964300 | Msa1038170:CDS | 35.0% |
| GAATCATAATCCAAAGACTC+AGG | - | chr7_1:74964345-74964364 | None:intergenic | 35.0% | |
| GAGTCTTTGGATTATGATTC+TGG | + | chr7_1:74964345-74964364 | Msa1038170:CDS | 35.0% | |
| TATCAAGAGTAAAGCTTCTG+TGG | + | chr7_1:74964379-74964398 | Msa1038170:intron | 35.0% | |
| ! | CTACATGGTACTATGGATTA+GGG | + | chr7_1:74964512-74964531 | Msa1038170:CDS | 35.0% |
| GCAGTTATTCCAAAAAGACA+AGG | - | chr7_1:74964571-74964590 | None:intergenic | 35.0% | |
| CGCGAATTACCTTAAAAACA+AGG | - | chr7_1:74964593-74964612 | None:intergenic | 35.0% | |
| TAGGGTGAAAATTTCATCTG+TGG | + | chr7_1:74964688-74964707 | Msa1038170:intron | 35.0% | |
| TCTTAGGGAATTCAAATGAG+TGG | - | chr7_1:74964999-74965018 | None:intergenic | 35.0% | |
| CCTTTCACATTACATCTCTT+AGG | - | chr7_1:74965015-74965034 | None:intergenic | 35.0% | |
| CCTAAGAGATGTAATGTGAA+AGG | + | chr7_1:74965012-74965031 | Msa1038170:intron | 35.0% | |
| !!! | GAAAGGTTTTAAGCTTGCAT+TGG | + | chr7_1:74965029-74965048 | Msa1038170:intron | 35.0% |
| !! | GTTTTAAGCTTGCATTGGAA+AGG | + | chr7_1:74965034-74965053 | Msa1038170:intron | 35.0% |
| AGGCTAAAAATCAGTTTGAG+TGG | + | chr7_1:74965054-74965073 | Msa1038170:intron | 35.0% | |
| AGAATTGAGAGAAAAGGGAA+AGG | - | chr7_1:74965085-74965104 | None:intergenic | 35.0% | |
| ! | CTTTGCATCAGAGATTTGTT+TGG | + | chr7_1:74965171-74965190 | Msa1038170:intron | 35.0% |
| ! | ATTATCCCTCTTGTTTCCGT+TGG | - | chr7_1:74961506-74961525 | None:intergenic | 40.0% |
| CACCAGATCCAATAAACACA+TGG | + | chr7_1:74961730-74961749 | Msa1038170:CDS | 40.0% | |
| !!! | ATGGTTGTTTTGGTCTCTGA+TGG | + | chr7_1:74961749-74961768 | Msa1038170:CDS | 40.0% |
| ! | GTGTTCGTCCTAAGAGATTT+TGG | + | chr7_1:74961931-74961950 | Msa1038170:CDS | 40.0% |
| ! | GTTCGTCCTAAGAGATTTTG+GGG | + | chr7_1:74961933-74961952 | Msa1038170:CDS | 40.0% |
| ! | CATTCTGAGAGGTTGAATTC+CGG | + | chr7_1:74962186-74962205 | Msa1038170:CDS | 40.0% |
| ACTACTAAATCTTACACCGG+AGG | + | chr7_1:74962267-74962286 | Msa1038170:CDS | 40.0% | |
| ! | ACTGTGTTTCTTCCTTTTGC+AGG | + | chr7_1:74962352-74962371 | Msa1038170:intron | 40.0% |
| GGATCAAAAACACGTGCATT+GGG | - | chr7_1:74962415-74962434 | None:intergenic | 40.0% | |
| TGGATCAAAAACACGTGCAT+TGG | - | chr7_1:74962416-74962435 | None:intergenic | 40.0% | |
| TCTGGATTTCAACTCTTCTG+GGG | - | chr7_1:74962446-74962465 | None:intergenic | 40.0% | |
| GTCTGGATTTCAACTCTTCT+GGG | - | chr7_1:74962447-74962466 | None:intergenic | 40.0% | |
| !! | GTTGATAGTCTCTCCATTTC+CGG | - | chr7_1:74962475-74962494 | None:intergenic | 40.0% |
| TCTTTACATGCTCGCTAACA+AGG | + | chr7_1:74962516-74962535 | Msa1038170:CDS | 40.0% | |
| GGGATTCTCTCAAACAAGTT+AGG | - | chr7_1:74962718-74962737 | None:intergenic | 40.0% | |
| CCATTAGGCAAATGTAACTG+TGG | - | chr7_1:74962739-74962758 | None:intergenic | 40.0% | |
| CCACAGTTACATTTGCCTAA+TGG | + | chr7_1:74962736-74962755 | Msa1038170:intron | 40.0% | |
| GTGTTCTATGTCCTATTGAC+CGG | + | chr7_1:74962807-74962826 | Msa1038170:intron | 40.0% | |
| TACAGACAATACCGGTCAAT+AGG | - | chr7_1:74962821-74962840 | None:intergenic | 40.0% | |
| CACTGAGATAAAATCTCCAC+AGG | - | chr7_1:74962929-74962948 | None:intergenic | 40.0% | |
| CCAGTGTATAGTGAATCACA+CGG | - | chr7_1:74963189-74963208 | None:intergenic | 40.0% | |
| CGTGTGATTCACTATACACT+GGG | + | chr7_1:74963187-74963206 | Msa1038170:CDS | 40.0% | |
| ! | GGCAGGTAATTATCCTCTTT+TGG | + | chr7_1:74963266-74963285 | Msa1038170:intron | 40.0% |
| CGTATTTCTTCTTACCTTGG+TGG | + | chr7_1:74963372-74963391 | Msa1038170:intron | 40.0% | |
| ATAGGGCTTCGAATAAGTCT+TGG | + | chr7_1:74963596-74963615 | Msa1038170:intron | 40.0% | |
| !! | TTGCAGAATCGAGAGTACTT+TGG | + | chr7_1:74963632-74963651 | Msa1038170:intron | 40.0% |
| !!! | CAGTCTCCTGGTTTTAGATT+TGG | + | chr7_1:74963784-74963803 | Msa1038170:intron | 40.0% |
| CAAACACAACGCCTTGTATA+AGG | + | chr7_1:74963862-74963881 | Msa1038170:intron | 40.0% | |
| !! | ATTTTGGGAGGCCTTATACA+AGG | - | chr7_1:74963876-74963895 | None:intergenic | 40.0% |
| CTCCCAAAATCTCTTGTACA+GGG | + | chr7_1:74963886-74963905 | Msa1038170:intron | 40.0% | |
| TCCTGTACATGAGAAGAACA+CGG | - | chr7_1:74963914-74963933 | None:intergenic | 40.0% | |
| ATGACATGACAACATTGACC+AGG | - | chr7_1:74963973-74963992 | None:intergenic | 40.0% | |
| TGGTCAATGTTGTCATGTCA+TGG | + | chr7_1:74963972-74963991 | Msa1038170:intron | 40.0% | |
| AAGTATGCAAGTCCAACTAG+AGG | - | chr7_1:74964020-74964039 | None:intergenic | 40.0% | |
| TGCAAGGTTCCTACGTATTT+GGG | + | chr7_1:74964108-74964127 | Msa1038170:CDS | 40.0% | |
| GAAATACCACCCAAATACGT+AGG | - | chr7_1:74964120-74964139 | None:intergenic | 40.0% | |
| ATCAAAAGCAAACCAGTCCA+CGG | - | chr7_1:74964216-74964235 | None:intergenic | 40.0% | |
| ! | CTTCATTTGGTTTATCGGTG+GGG | + | chr7_1:74964282-74964301 | Msa1038170:CDS | 40.0% |
| CATCATGTGATACTGCTACA+TGG | + | chr7_1:74964497-74964516 | Msa1038170:CDS | 40.0% | |
| GATACTGCTACATGGTACTA+TGG | + | chr7_1:74964505-74964524 | Msa1038170:CDS | 40.0% | |
| GCTACATGGTACTATGGATT+AGG | + | chr7_1:74964511-74964530 | Msa1038170:CDS | 40.0% | |
| !! | ATGGTACTATGGATTAGGGA+TGG | + | chr7_1:74964516-74964535 | Msa1038170:CDS | 40.0% |
| CCAAAAAGACAAGGCAAAGA+TGG | - | chr7_1:74964562-74964581 | None:intergenic | 40.0% | |
| ! | CCATCTTTGCCTTGTCTTTT+TGG | + | chr7_1:74964559-74964578 | Msa1038170:CDS | 40.0% |
| TTCATCTGTGGTTCCAAAAG+TGG | + | chr7_1:74964700-74964719 | Msa1038170:intron | 40.0% | |
| GTCTACTCTGATGTGATTCT+AGG | - | chr7_1:74965121-74965140 | None:intergenic | 40.0% | |
| ! | AGGTTAGGTTTGATGGTTGT+CGG | + | chr7_1:74965229-74965248 | Msa1038170:intron | 40.0% |
| ! | CTTCTGAACATCTTGCTATC+CGG | + | chr7_1:74965284-74965303 | Msa1038170:CDS | 40.0% |
| !! | CAAGTCCTTTTAGGAATGAC+CGG | - | chr7_1:74965306-74965325 | None:intergenic | 40.0% |
| TCCTAAAAGGACTTGATGAG+TGG | + | chr7_1:74965311-74965330 | Msa1038170:CDS | 40.0% | |
| CCTAAAAGGACTTGATGAGT+GGG | + | chr7_1:74965312-74965331 | Msa1038170:CDS | 40.0% | |
| AGTGGGATATTGCTCCAAAT+AGG | + | chr7_1:74965329-74965348 | Msa1038170:CDS | 40.0% | |
| ATGAAACACAGGCTCCTATT+TGG | - | chr7_1:74965346-74965365 | None:intergenic | 40.0% | |
| TTTCAGTCGTCTCTGACCTT+CGG | - | chr7_1:74961408-74961427 | None:intergenic | 45.0% | |
| ! | CGCCAACTGATTCTACTGTT+TGG | - | chr7_1:74961557-74961576 | None:intergenic | 45.0% |
| TTATTGGGCGTTCGTGTTCT+CGG | + | chr7_1:74961692-74961711 | Msa1038170:CDS | 45.0% | |
| !!! | GAGGAGGTTTTTGGCGAAAT+TGG | - | chr7_1:74961780-74961799 | None:intergenic | 45.0% |
| GAATAATACTGACACGGAGG+AGG | - | chr7_1:74961796-74961815 | None:intergenic | 45.0% | |
| ! | TTTTGTGTGTTGCAGGCTGA+TGG | + | chr7_1:74961867-74961886 | Msa1038170:intron | 45.0% |
| AGGACGAACACGATTAGGAT+TGG | - | chr7_1:74961922-74961941 | None:intergenic | 45.0% | |
| CTCTTAGGACGAACACGATT+AGG | - | chr7_1:74961927-74961946 | None:intergenic | 45.0% | |
| GAGGTTGAATTCCGGAGTTA+TGG | + | chr7_1:74962194-74962213 | Msa1038170:CDS | 45.0% | |
| GTTGAATTCCGGAGTTATGG+TGG | + | chr7_1:74962197-74962216 | Msa1038170:CDS | 45.0% | |
| ! | TCTTCCTTTTGCAGGAGATC+AGG | + | chr7_1:74962360-74962379 | Msa1038170:intron | 45.0% |
| ! | CTTCCTTTTGCAGGAGATCA+GGG | + | chr7_1:74962361-74962380 | Msa1038170:intron | 45.0% |
| AATCCCTGATCTCCTGCAAA+AGG | - | chr7_1:74962367-74962386 | None:intergenic | 45.0% | |
| ! | AACTCTTCTGGGGACAAGTT+TGG | - | chr7_1:74962436-74962455 | None:intergenic | 45.0% |
| GGTCTGGATTTCAACTCTTC+TGG | - | chr7_1:74962448-74962467 | None:intergenic | 45.0% | |
| GTTGAAATCCAGACCTGTTC+CGG | + | chr7_1:74962453-74962472 | Msa1038170:CDS | 45.0% | |
| ACATGCTCGCTAACAAGGTA+CGG | + | chr7_1:74962521-74962540 | Msa1038170:intron | 45.0% | |
| GCTAACAAGGTACGGAGTAT+AGG | + | chr7_1:74962529-74962548 | Msa1038170:intron | 45.0% | |
| !! | TACGGAGTATAGGTACTGAG+AGG | + | chr7_1:74962539-74962558 | Msa1038170:intron | 45.0% |
| !! | GAGTATAGGTACTGAGAGGA+TGG | + | chr7_1:74962543-74962562 | Msa1038170:intron | 45.0% |
| GTTCATGCTGATCTATCCAG+TGG | + | chr7_1:74963143-74963162 | Msa1038170:intron | 45.0% | |
| ATGCTGATCTATCCAGTGGA+TGG | + | chr7_1:74963147-74963166 | Msa1038170:intron | 45.0% | |
| CTTTCTCATCTACCATCCAC+TGG | - | chr7_1:74963162-74963181 | None:intergenic | 45.0% | |
| CCGTGTGATTCACTATACAC+TGG | + | chr7_1:74963186-74963205 | Msa1038170:CDS | 45.0% | |
| ATTACCTGCCAGACATCAAC+AGG | - | chr7_1:74963256-74963275 | None:intergenic | 45.0% | |
| CTGGGTAGACATGATTGCTT+CGG | - | chr7_1:74963325-74963344 | None:intergenic | 45.0% | |
| TGGGGTTCTTCAGGATGTTA+GGG | + | chr7_1:74963392-74963411 | Msa1038170:intron | 45.0% | |
| AGGATGTTAGGGAACAGCTT+GGG | + | chr7_1:74963403-74963422 | Msa1038170:intron | 45.0% | |
| ! | GTGCCTGACTTGATCACATA+GGG | - | chr7_1:74963675-74963694 | None:intergenic | 45.0% |
| GACTGAGAAAACCAACCTGA+TGG | - | chr7_1:74963769-74963788 | None:intergenic | 45.0% | |
| ! | CCTGTACAAGAGATTTTGGG+AGG | - | chr7_1:74963888-74963907 | None:intergenic | 45.0% |
| CCTCCCAAAATCTCTTGTAC+AGG | + | chr7_1:74963885-74963904 | Msa1038170:intron | 45.0% | |
| ! | GGCCCTGTACAAGAGATTTT+GGG | - | chr7_1:74963891-74963910 | None:intergenic | 45.0% |
| CTGTACATGAGAAGAACACG+GGG | - | chr7_1:74963912-74963931 | None:intergenic | 45.0% | |
| CCTGTACATGAGAAGAACAC+GGG | - | chr7_1:74963913-74963932 | None:intergenic | 45.0% | |
| CAGGATGCATAACCTCTAGT+TGG | + | chr7_1:74964005-74964024 | Msa1038170:intron | 45.0% | |
| GTGCAAGGTTCCTACGTATT+TGG | + | chr7_1:74964107-74964126 | Msa1038170:CDS | 45.0% | |
| AAGGTTCCTACGTATTTGGG+TGG | + | chr7_1:74964111-74964130 | Msa1038170:CDS | 45.0% | |
| TTTCTGTTTAACGGCTGCTG+TGG | + | chr7_1:74964146-74964165 | Msa1038170:CDS | 45.0% | |
| TAGCTCTCTTGATTGTTCCC+CGG | + | chr7_1:74964181-74964200 | Msa1038170:CDS | 45.0% | |
| TTATCGGTGGGGAAAACATG+TGG | + | chr7_1:74964293-74964312 | Msa1038170:CDS | 45.0% | |
| !! | TGGCAACAAAGAGCCACTTT+TGG | - | chr7_1:74964716-74964735 | None:intergenic | 45.0% |
| ! | GGTTAGGTTTGATGGTTGTC+GGG | + | chr7_1:74965230-74965249 | Msa1038170:intron | 45.0% |
| ! | GTTAGGTTTGATGGTTGTCG+GGG | + | chr7_1:74965231-74965250 | Msa1038170:CDS | 45.0% |
| ! | TTAGGTTTGATGGTTGTCGG+GGG | + | chr7_1:74965232-74965251 | Msa1038170:CDS | 45.0% |
| GCTATCCGGTCATTCCTAAA+AGG | + | chr7_1:74965298-74965317 | Msa1038170:CDS | 45.0% | |
| ! | CCCACTCATCAAGTCCTTTT+AGG | - | chr7_1:74965315-74965334 | None:intergenic | 45.0% |
| ATAAGCGGTGATGTAAACGG+TGG | + | chr7_1:74965384-74965403 | Msa1038170:three_prime_UTR | 45.0% | |
| !!! | AAAATAATAAAATTTTAACA+TGG | + | chr7_1:74964818-74964837 | Msa1038170:intron | 5.0% |
| !! | ATTGGATCTGGTGTCGCGTA+TGG | - | chr7_1:74961723-74961742 | None:intergenic | 50.0% |
| ! | ACTGACACGGAGGAGGTTTT+TGG | - | chr7_1:74961789-74961808 | None:intergenic | 50.0% |
| !! | CCACAATAGTATCGGCATCG+AGG | - | chr7_1:74962113-74962132 | None:intergenic | 50.0% |
| CCTCGATGCCGATACTATTG+TGG | + | chr7_1:74962110-74962129 | Msa1038170:CDS | 50.0% | |
| ATCCAGACCTGTTCCGGAAA+TGG | + | chr7_1:74962459-74962478 | Msa1038170:CDS | 50.0% | |
| AGTCTCTCCATTTCCGGAAC+AGG | - | chr7_1:74962469-74962488 | None:intergenic | 50.0% | |
| GTGAGTAGCACAGATTCCTG+TGG | + | chr7_1:74962910-74962929 | Msa1038170:intron | 50.0% | |
| CTTGTCGGAATTGCTGTCGA+GGG | + | chr7_1:74962966-74962985 | Msa1038170:intron | 50.0% | |
| GAAACCTGTTGATGTCTGGC+AGG | + | chr7_1:74963249-74963268 | Msa1038170:CDS | 50.0% | |
| TTACCTTGGTGGGGTTCTTC+AGG | + | chr7_1:74963383-74963402 | Msa1038170:intron | 50.0% | |
| GTGGGGTTCTTCAGGATGTT+AGG | + | chr7_1:74963391-74963410 | Msa1038170:intron | 50.0% | |
| CAGGATGTTAGGGAACAGCT+TGG | + | chr7_1:74963402-74963421 | Msa1038170:intron | 50.0% | |
| GGATGTTAGGGAACAGCTTG+GGG | + | chr7_1:74963404-74963423 | Msa1038170:intron | 50.0% | |
| GCTCCCTATGTGATCAAGTC+AGG | + | chr7_1:74963669-74963688 | Msa1038170:CDS | 50.0% | |
| ! | GGTGCCTGACTTGATCACAT+AGG | - | chr7_1:74963676-74963695 | None:intergenic | 50.0% |
| !!! | GGTTGGTTTTCTCAGTCTCC+TGG | + | chr7_1:74963772-74963791 | Msa1038170:intron | 50.0% |
| ! | GGGCCCTGTACAAGAGATTT+TGG | - | chr7_1:74963892-74963911 | None:intergenic | 50.0% |
| CCCGTGTTCTTCTCATGTAC+AGG | + | chr7_1:74963910-74963929 | Msa1038170:intron | 50.0% | |
| CTCGAATGGTTCTCAGTGCA+AGG | + | chr7_1:74964092-74964111 | Msa1038170:CDS | 50.0% | |
| CAAAGACTCAGGAAGTGACG+AGG | - | chr7_1:74964334-74964353 | None:intergenic | 50.0% | |
| CTCGTCACTTCCTGAGTCTT+TGG | + | chr7_1:74964332-74964351 | Msa1038170:CDS | 50.0% | |
| !! | TGGATTAGGGATGGCCTTGT+TGG | + | chr7_1:74964525-74964544 | Msa1038170:CDS | 50.0% |
| ! | AGGCAAAGATGGAGCACCAA+TGG | - | chr7_1:74964551-74964570 | None:intergenic | 50.0% |
| AAGTGGCTCTTTGTTGCCAG+TGG | + | chr7_1:74964717-74964736 | Msa1038170:intron | 50.0% | |
| GCCAGTGGCATGTCTGTTAT+CGG | + | chr7_1:74964732-74964751 | Msa1038170:intron | 50.0% | |
| GTGTGTTGCAGGCTGATGGT+TGG | + | chr7_1:74961871-74961890 | Msa1038170:intron | 55.0% | |
| TGGCTCGACCACCATAACTC+CGG | - | chr7_1:74962208-74962227 | None:intergenic | 55.0% | |
| CTCCATTTCCGGAACAGGTC+TGG | - | chr7_1:74962464-74962483 | None:intergenic | 55.0% | |
| CCTCGACAGCAATTCCGACA+AGG | - | chr7_1:74962968-74962987 | None:intergenic | 55.0% | |
| CCTTGTCGGAATTGCTGTCG+AGG | + | chr7_1:74962965-74962984 | Msa1038170:intron | 55.0% | |
| ACTGGGACCCCTTAAGCCTT+GGG | + | chr7_1:74963204-74963223 | Msa1038170:CDS | 55.0% | |
| CACCAGTCCCAAGGCTTAAG+GGG | - | chr7_1:74963214-74963233 | None:intergenic | 55.0% | |
| CCACCAGTCCCAAGGCTTAA+GGG | - | chr7_1:74963215-74963234 | None:intergenic | 55.0% | |
| TCCACCAGTCCCAAGGCTTA+AGG | - | chr7_1:74963216-74963235 | None:intergenic | 55.0% | |
| CAAGATGTCCACCAGTCCCA+AGG | - | chr7_1:74963223-74963242 | None:intergenic | 55.0% | |
| ! | CTTGGGACTGGTGGACATCT+TGG | + | chr7_1:74963221-74963240 | Msa1038170:CDS | 55.0% |
| CATCCTGAAGAACCCCACCA+AGG | - | chr7_1:74963389-74963408 | None:intergenic | 55.0% | |
| GAGTCCCTTCCTGGAACAAG+AGG | + | chr7_1:74963426-74963445 | Msa1038170:CDS | 55.0% | |
| TCCCTTCCTGGAACAAGAGG+CGG | + | chr7_1:74963429-74963448 | Msa1038170:CDS | 55.0% | |
| ! | TTTTGGCCGCCTCTTGTTCC+AGG | - | chr7_1:74963438-74963457 | None:intergenic | 55.0% |
| GGTGTCAAGCAGCTCTCGAA+TGG | + | chr7_1:74964078-74964097 | Msa1038170:CDS | 55.0% | |
| ! | TGGAGCACCAATGGCCAACA+AGG | - | chr7_1:74964542-74964561 | None:intergenic | 55.0% |
| GCCGATAACAGACATGCCAC+TGG | - | chr7_1:74964736-74964755 | None:intergenic | 55.0% | |
| !! | GGTTGTCGGGGGCATCATAT+TGG | + | chr7_1:74965243-74965262 | Msa1038170:CDS | 55.0% |
| CTCTGACCTTCGGTCACCAC+TGG | - | chr7_1:74961398-74961417 | None:intergenic | 60.0% | |
| CACTGGGACCCCTTAAGCCT+TGG | + | chr7_1:74963203-74963222 | Msa1038170:CDS | 60.0% | |
| GACCCCTTAAGCCTTGGGAC+TGG | + | chr7_1:74963209-74963228 | Msa1038170:CDS | 60.0% | |
| CCCTTAAGCCTTGGGACTGG+TGG | + | chr7_1:74963212-74963231 | Msa1038170:CDS | 60.0% | |
| GCCGCCTCTTGTTCCAGGAA+GGG | - | chr7_1:74963433-74963452 | None:intergenic | 60.0% | |
| ACGGCTGCTGTGGTGTCTCT+TGG | + | chr7_1:74964156-74964175 | Msa1038170:CDS | 60.0% | |
| AGTCCACGGCATCACTTGCC+GGG | - | chr7_1:74964202-74964221 | None:intergenic | 60.0% | |
| CAGTCCACGGCATCACTTGC+CGG | - | chr7_1:74964203-74964222 | None:intergenic | 60.0% | |
| !! | GGGATGGCCTTGTTGGCCAT+TGG | + | chr7_1:74964532-74964551 | Msa1038170:CDS | 60.0% |
| AGATGCACGCACGCAGCCAG+TGG | + | chr7_1:74961379-74961398 | Msa1038170:five_prime_UTR | 65.0% | |
| ACGCAGCCAGTGGTGACCGA+AGG | + | chr7_1:74961389-74961408 | Msa1038170:five_prime_UTR | 65.0% | |
| CAGCTTGGGGAGTCCCTTCC+TGG | + | chr7_1:74963417-74963436 | Msa1038170:CDS | 65.0% | |
| GGCCGCCTCTTGTTCCAGGA+AGG | - | chr7_1:74963434-74963453 | None:intergenic | 65.0% | |
| TTCCCCGGCAAGTGATGCCG+TGG | + | chr7_1:74964196-74964215 | Msa1038170:CDS | 65.0% | |
| GTCCACGGCATCACTTGCCG+GGG | - | chr7_1:74964201-74964220 | None:intergenic | 65.0% | |
| CGGCAAGTGATGCCGTGGAC+TGG | + | chr7_1:74964201-74964220 | Msa1038170:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 74961309 | 74965570 | 74961309 | ID=Msa1038170;Name=Msa1038170 |
| chr7_1 | mRNA | 74961309 | 74965570 | 74961309 | ID=Msa1038170-mRNA-1;Parent=Msa1038170;Name=Msa1038170-mRNA-1;_AED=0.04;_eAED=0.04;_QI=239|0.88|0.9|1|1|1|10|198|559 |
| chr7_1 | exon | 74961309 | 74961802 | 74961309 | ID=Msa1038170-mRNA-1:exon:18954;Parent=Msa1038170-mRNA-1 |
| chr7_1 | exon | 74961882 | 74962002 | 74961882 | ID=Msa1038170-mRNA-1:exon:18955;Parent=Msa1038170-mRNA-1 |
| chr7_1 | exon | 74962103 | 74962288 | 74962103 | ID=Msa1038170-mRNA-1:exon:18956;Parent=Msa1038170-mRNA-1 |
| chr7_1 | exon | 74962374 | 74962537 | 74962374 | ID=Msa1038170-mRNA-1:exon:18957;Parent=Msa1038170-mRNA-1 |
| chr7_1 | exon | 74963163 | 74963270 | 74963163 | ID=Msa1038170-mRNA-1:exon:18958;Parent=Msa1038170-mRNA-1 |
| chr7_1 | exon | 74963405 | 74963542 | 74963405 | ID=Msa1038170-mRNA-1:exon:18959;Parent=Msa1038170-mRNA-1 |
| chr7_1 | exon | 74963638 | 74963772 | 74963638 | ID=Msa1038170-mRNA-1:exon:18960;Parent=Msa1038170-mRNA-1 |
| chr7_1 | exon | 74964066 | 74964372 | 74964066 | ID=Msa1038170-mRNA-1:exon:18961;Parent=Msa1038170-mRNA-1 |
| chr7_1 | exon | 74964479 | 74964602 | 74964479 | ID=Msa1038170-mRNA-1:exon:18962;Parent=Msa1038170-mRNA-1 |
| chr7_1 | exon | 74965231 | 74965570 | 74965231 | ID=Msa1038170-mRNA-1:exon:18963;Parent=Msa1038170-mRNA-1 |
| chr7_1 | five_prime_UTR | 74961309 | 74961547 | 74961309 | ID=Msa1038170-mRNA-1:five_prime_utr;Parent=Msa1038170-mRNA-1 |
| chr7_1 | CDS | 74961548 | 74961802 | 74961548 | ID=Msa1038170-mRNA-1:cds;Parent=Msa1038170-mRNA-1 |
| chr7_1 | CDS | 74961882 | 74962002 | 74961882 | ID=Msa1038170-mRNA-1:cds;Parent=Msa1038170-mRNA-1 |
| chr7_1 | CDS | 74962103 | 74962288 | 74962103 | ID=Msa1038170-mRNA-1:cds;Parent=Msa1038170-mRNA-1 |
| chr7_1 | CDS | 74962374 | 74962537 | 74962374 | ID=Msa1038170-mRNA-1:cds;Parent=Msa1038170-mRNA-1 |
| chr7_1 | CDS | 74963163 | 74963270 | 74963163 | ID=Msa1038170-mRNA-1:cds;Parent=Msa1038170-mRNA-1 |
| chr7_1 | CDS | 74963405 | 74963542 | 74963405 | ID=Msa1038170-mRNA-1:cds;Parent=Msa1038170-mRNA-1 |
| chr7_1 | CDS | 74963638 | 74963772 | 74963638 | ID=Msa1038170-mRNA-1:cds;Parent=Msa1038170-mRNA-1 |
| chr7_1 | CDS | 74964066 | 74964372 | 74964066 | ID=Msa1038170-mRNA-1:cds;Parent=Msa1038170-mRNA-1 |
| chr7_1 | CDS | 74964479 | 74964602 | 74964479 | ID=Msa1038170-mRNA-1:cds;Parent=Msa1038170-mRNA-1 |
| chr7_1 | CDS | 74965231 | 74965372 | 74965231 | ID=Msa1038170-mRNA-1:cds;Parent=Msa1038170-mRNA-1 |
| chr7_1 | three_prime_UTR | 74965373 | 74965570 | 74965373 | ID=Msa1038170-mRNA-1:three_prime_utr;Parent=Msa1038170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
