Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0935470 | KEH24897.1 | 93.800 | 629 | 31 | 1 | 1 | 629 | 1 | 621 | 0.0 | 1226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0935470 | sp|Q5GQ66|PIOX_PEA | 83.223 | 602 | 101 | 0 | 28 | 629 | 42 | 643 | 0.0 | 1071 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0935470 | A0A072U5H0 | 93.800 | 629 | 31 | 1 | 1 | 629 | 1 | 621 | 0.0 | 1226 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0935470 | 0.810860 | 9.342619e-51 | -8.615850e-47 |
| Msa0028420 | Msa0935470 | 0.825208 | 5.314311e-54 | -8.615850e-47 |
| Msa0042610 | Msa0935470 | 0.808856 | 2.521660e-50 | -8.615850e-47 |
| Msa0081090 | Msa0935470 | 0.805605 | 1.231448e-49 | -8.615850e-47 |
| Msa0081520 | Msa0935470 | 0.809920 | 1.490635e-50 | -8.615850e-47 |
| Msa0090400 | Msa0935470 | 0.814011 | 1.914252e-51 | -8.615850e-47 |
| Msa0092790 | Msa0935470 | 0.834532 | 2.837933e-56 | -8.615850e-47 |
| Msa0626450 | Msa0935470 | 0.817160 | 3.808000e-52 | -8.615850e-47 |
| Msa0626490 | Msa0935470 | 0.814866 | 1.238311e-51 | -8.615850e-47 |
| Msa0638480 | Msa0935470 | 0.800338 | 1.510626e-48 | -8.615850e-47 |
| Msa0657180 | Msa0935470 | 0.857668 | 1.395672e-62 | -8.615850e-47 |
| Msa0664600 | Msa0935470 | 0.817846 | 2.668237e-52 | -8.615850e-47 |
| Msa0670100 | Msa0935470 | 0.810137 | 1.338292e-50 | -8.615850e-47 |
| Msa0683470 | Msa0935470 | 0.806472 | 8.092671e-50 | -8.615850e-47 |
| Msa0701220 | Msa0935470 | 0.866015 | 3.881431e-65 | -8.615850e-47 |
| Msa0741220 | Msa0935470 | 0.802542 | 5.340246e-49 | -8.615850e-47 |
| Msa0795870 | Msa0935470 | 0.814962 | 1.179366e-51 | -8.615850e-47 |
| Msa0833650 | Msa0935470 | 0.815655 | 8.269695e-52 | -8.615850e-47 |
| Msa0124060 | Msa0935470 | 0.818779 | 1.640464e-52 | -8.615850e-47 |
| Msa0137880 | Msa0935470 | 0.817091 | 3.947888e-52 | -8.615850e-47 |
| Msa0158860 | Msa0935470 | 0.814419 | 1.555304e-51 | -8.615850e-47 |
| Msa0168500 | Msa0935470 | 0.810925 | 9.043176e-51 | -8.615850e-47 |
| Msa0182240 | Msa0935470 | 0.814323 | 1.633630e-51 | -8.615850e-47 |
| Msa0225860 | Msa0935470 | 0.829997 | 3.763425e-55 | -8.615850e-47 |
| Msa0476650 | Msa0935470 | 0.815854 | 7.468569e-52 | -8.615850e-47 |
| Msa0239190 | Msa0935470 | 0.808206 | 3.471099e-50 | -8.615850e-47 |
| Msa0255090 | Msa0935470 | 0.813044 | 3.123136e-51 | -8.615850e-47 |
| Msa0259380 | Msa0935470 | 0.802962 | 4.372829e-49 | -8.615850e-47 |
| Msa0267110 | Msa0935470 | 0.831061 | 2.066019e-55 | -8.615850e-47 |
| Msa0277180 | Msa0935470 | 0.813922 | 2.003095e-51 | -8.615850e-47 |
| Msa0287740 | Msa0935470 | 0.807093 | 5.981399e-50 | -8.615850e-47 |
| Msa0298470 | Msa0935470 | 0.829934 | 3.898737e-55 | -8.615850e-47 |
| Msa0316810 | Msa0935470 | 0.804010 | 2.651547e-49 | -8.615850e-47 |
| Msa0348880 | Msa0935470 | 0.805732 | 1.158328e-49 | -8.615850e-47 |
| Msa0565000 | Msa0935470 | 0.854849 | 9.357871e-62 | -8.615850e-47 |
| Msa0580370 | Msa0935470 | 0.821495 | 3.917010e-53 | -8.615850e-47 |
| Msa0868440 | Msa0935470 | 0.801851 | 7.407477e-49 | -8.615850e-47 |
| Msa0869680 | Msa0935470 | 0.828994 | 6.595728e-55 | -8.615850e-47 |
| Msa0876930 | Msa0935470 | 0.803919 | 2.770525e-49 | -8.615850e-47 |
| Msa0903070 | Msa0935470 | 0.931557 | 3.165924e-94 | -8.615850e-47 |
| Msa0935470 | Msa0944700 | 0.808388 | 3.174819e-50 | -8.615850e-47 |
| Msa0935470 | Msa0945110 | 0.827340 | 1.650968e-54 | -8.615850e-47 |
| Msa0935470 | Msa0969200 | 0.913831 | 3.899131e-84 | -8.615850e-47 |
| Msa0935470 | Msa1019430 | 0.808841 | 2.540729e-50 | -8.615850e-47 |
| Msa0935470 | Msa1019470 | 0.808927 | 2.435303e-50 | -8.615850e-47 |
| Msa0935470 | Msa1103990 | 0.825929 | 3.584310e-54 | -8.615850e-47 |
| Msa0935470 | Msa1132840 | 0.822383 | 2.439894e-53 | -8.615850e-47 |
| Msa0935470 | Msa1157870 | 0.802142 | 6.454938e-49 | -8.615850e-47 |
| Msa0935470 | Msa1174230 | 0.866410 | 2.910286e-65 | -8.615850e-47 |
| Msa0935470 | Msa1190920 | 0.823346 | 1.455438e-53 | -8.615850e-47 |
| Msa0935470 | Msa1208950 | 0.801017 | 1.097749e-48 | -8.615850e-47 |
| Msa0935470 | Msa1217210 | 0.801761 | 7.731185e-49 | -8.615850e-47 |
| Msa0935470 | Msa1224930 | 0.808511 | 2.988213e-50 | -8.615850e-47 |
| Msa0935470 | Msa1267900 | 0.820703 | 5.960746e-53 | -8.615850e-47 |
| Msa0935470 | Msa1269480 | 0.804210 | 2.410151e-49 | -8.615850e-47 |
| Msa0935470 | Msa1328710 | 0.800410 | 1.460042e-48 | -8.615850e-47 |
| Msa0935470 | Msa1427200 | 0.814154 | 1.779696e-51 | -8.615850e-47 |
| Msa0935470 | Msa1440880 | 0.808805 | 2.585093e-50 | -8.615850e-47 |
| Msa0935470 | Msa1440960 | 0.807206 | 5.661747e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0935470 | MtrunA17_Chr6g0451291 | 92.846 | 629 | 31 | 1 | 1 | 629 | 1 | 615 | 0.0 | 1209 |
| Msa0935470 | MtrunA17_Chr6g0451281 | 81.672 | 622 | 108 | 3 | 10 | 629 | 25 | 642 | 0.0 | 1073 |
| Msa0935470 | MtrunA17_Chr6g0451261 | 79.542 | 611 | 122 | 2 | 22 | 629 | 304 | 914 | 0.0 | 1026 |
| Msa0935470 | MtrunA17_Chr8g0392711 | 62.951 | 610 | 211 | 3 | 20 | 626 | 24 | 621 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0935470 | AT3G01420.1 | 74.793 | 603 | 151 | 1 | 28 | 629 | 37 | 639 | 0.0 | 950 |
| Msa0935470 | AT1G73680.1 | 63.680 | 625 | 224 | 3 | 2 | 626 | 7 | 628 | 0.0 | 817 |
| Msa0935470 | AT1G73680.2 | 62.461 | 634 | 226 | 5 | 2 | 626 | 7 | 637 | 0.0 | 803 |
| Msa0935470 | AT1G73680.3 | 66.409 | 518 | 173 | 1 | 109 | 626 | 3 | 519 | 0.0 | 717 |
| Msa0935470 | AT1G73680.4 | 66.947 | 475 | 156 | 1 | 152 | 626 | 1 | 474 | 0.0 | 665 |
Find 169 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTACTCCATCTTCATTT+TGG | 0.160377 | 6_3:-6072748 | None:intergenic |
| TTTATTTAGGTATGGATTAT+TGG | 0.165781 | 6_3:+6073664 | Msa0935470:intron |
| CATTGTGTTCTTGAATAAAA+AGG | 0.172248 | 6_3:-6072820 | None:intergenic |
| TCTCTTGGGCCTATTGTATT+TGG | 0.181493 | 6_3:+6071028 | Msa0935470:CDS |
| CTTCAAGTGCTTTCTCTGTT+TGG | 0.185040 | 6_3:+6075108 | Msa0935470:CDS |
| TATTGATACCTATTTCAAAA+TGG | 0.218562 | 6_3:+6074438 | Msa0935470:CDS |
| GGAATTGGATTGTCTTTGTT+TGG | 0.229305 | 6_3:-6075140 | None:intergenic |
| TGCAAGAGCATTAGTGTCTA+TGG | 0.246157 | 6_3:+6074135 | Msa0935470:CDS |
| GAATTGGATTGTCTTTGTTT+GGG | 0.253532 | 6_3:-6075139 | None:intergenic |
| GTTCTATATGGATAATCATT+AGG | 0.263833 | 6_3:-6071125 | None:intergenic |
| TTATTTAGGTATGGATTATT+GGG | 0.264621 | 6_3:+6073665 | Msa0935470:intron |
| ATAGAAAGTACTGAAATAAA+AGG | 0.270774 | 6_3:-6075657 | None:intergenic |
| TTCAAGTGCTTTCTCTGTTT+GGG | 0.278891 | 6_3:+6075109 | Msa0935470:CDS |
| AAAGTATTGGAAGAGGTATA+TGG | 0.283665 | 6_3:+6074491 | Msa0935470:CDS |
| TACTTTCTATTTCCATGAAA+TGG | 0.287774 | 6_3:+6075670 | Msa0935470:three_prime_UTR |
| AATTCTTCAGTTAGAGAGTA+TGG | 0.287850 | 6_3:-6073776 | None:intergenic |
| GAAGATGGAGTAGCAATTTC+AGG | 0.292686 | 6_3:+6072755 | Msa0935470:CDS |
| TACAAATGAGGTCGAGCTTA+TGG | 0.299281 | 6_3:-6075729 | None:intergenic |
| TCGCAGGCATGCGTGGAAAT+TGG | 0.299707 | 6_3:+6073312 | Msa0935470:CDS |
| TGAGGAGACATACACCAAAA+AGG | 0.300584 | 6_3:+6075001 | Msa0935470:CDS |
| TCTTCTAAATTGATTATATC+TGG | 0.301658 | 6_3:-6074408 | None:intergenic |
| TTGCATCCTCTCCTTGTTCA+AGG | 0.303129 | 6_3:+6075595 | Msa0935470:three_prime_UTR |
| GCACCGTTTACCTGTTCTCT+TGG | 0.305249 | 6_3:+6071013 | Msa0935470:CDS |
| TATGGAACACCATGATTATC+TGG | 0.307899 | 6_3:-6073758 | None:intergenic |
| ATATAAATGGTGCAGTTTAT+AGG | 0.314355 | 6_3:+6074366 | Msa0935470:intron |
| TTTCCATCAGCAGTTCTATA+TGG | 0.317935 | 6_3:-6071137 | None:intergenic |
| AACCACTTCTCTGTCATTCC+TGG | 0.318503 | 6_3:-6075080 | None:intergenic |
| GGTGGTAGCCACAAAACTTT+TGG | 0.318774 | 6_3:+6071473 | Msa0935470:CDS |
| AAGAAATTCAAGGACACGTT+TGG | 0.321740 | 6_3:+6073689 | Msa0935470:CDS |
| ATGGATAGTTTCCAAGTGTT+AGG | 0.324477 | 6_3:-6074177 | None:intergenic |
| TATAAATGGTGCAGTTTATA+GGG | 0.329414 | 6_3:+6074367 | Msa0935470:intron |
| CATCTATGTTCTGTGGTACT+AGG | 0.336758 | 6_3:-6074213 | None:intergenic |
| AGAAACTAGATTTACTAGTA+TGG | 0.348818 | 6_3:-6075701 | None:intergenic |
| ATACGAAGATAAAGTGGAAT+TGG | 0.356112 | 6_3:-6075155 | None:intergenic |
| ACATGATTGGATAGATCATT+TGG | 0.364113 | 6_3:+6071566 | Msa0935470:CDS |
| GACAAACAGCTGTAGGAGTT+AGG | 0.366038 | 6_3:+6071096 | Msa0935470:CDS |
| TCATTTGGAGGACACTAATC+AGG | 0.369095 | 6_3:+6071581 | Msa0935470:CDS |
| GAACACAACTGAGAGCTTAA+AGG | 0.370793 | 6_3:+6075037 | Msa0935470:CDS |
| TTCTATATGGATAATCATTA+GGG | 0.374278 | 6_3:-6071124 | None:intergenic |
| TCTTTACCGTTATGCTAGAT+TGG | 0.374775 | 6_3:+6073217 | Msa0935470:CDS |
| TCTATGGGTCATCAAACTTC+TGG | 0.375181 | 6_3:+6074151 | Msa0935470:CDS |
| CAGGTGATGTTCGTAATAGT+TGG | 0.375562 | 6_3:+6072774 | Msa0935470:CDS |
| CTTAGTCAAGTTAATTAACT+AGG | 0.376425 | 6_3:-6075179 | None:intergenic |
| CCATTGACAAGCTTGGAATA+TGG | 0.378143 | 6_3:+6070991 | Msa0935470:CDS |
| TTGGCATACTCTTTGATTAG+TGG | 0.381268 | 6_3:-6073887 | None:intergenic |
| ATGGAATCATATCCATTTCA+TGG | 0.381448 | 6_3:-6075682 | None:intergenic |
| AGGGATGGAAGTGTGATATA+TGG | 0.381936 | 6_3:+6072647 | Msa0935470:intron |
| TTCAATTTATGATACATGAT+TGG | 0.382105 | 6_3:+6071553 | Msa0935470:CDS |
| TCTCTCAAATGCAGAGAATC+AGG | 0.385455 | 6_3:-6073830 | None:intergenic |
| GAAGGAGGCTAGAGGCTGAT+AGG | 0.395767 | 6_3:+6074958 | Msa0935470:intron |
| CAAGAATAACCAATGATTAG+AGG | 0.397685 | 6_3:+6075560 | Msa0935470:intron |
| GTGGCTACCACCATAGGGTC+TGG | 0.402779 | 6_3:-6071462 | None:intergenic |
| CAAAGATTCACACTATAGAT+TGG | 0.406140 | 6_3:+6073258 | Msa0935470:CDS |
| GGAAGTCAAGGGTCTTTCAT+TGG | 0.407694 | 6_3:+6071188 | Msa0935470:CDS |
| CACCGTTTACCTGTTCTCTT+GGG | 0.408694 | 6_3:+6071014 | Msa0935470:CDS |
| AAGAATTTGTCAGTGTCTAT+AGG | 0.411562 | 6_3:+6073792 | Msa0935470:CDS |
| CGCTATCTTTGGTGGATTGG+TGG | 0.411596 | 6_3:+6073724 | Msa0935470:CDS |
| CATGTCGGTGACGCTATCTT+TGG | 0.414452 | 6_3:+6073713 | Msa0935470:CDS |
| ATTGATACCTATTTCAAAAT+GGG | 0.422128 | 6_3:+6074439 | Msa0935470:CDS |
| TAATTAGTTGAAATTTAAAC+AGG | 0.423545 | 6_3:-6075311 | None:intergenic |
| CATGGCAGAGAAGAAGATAA+AGG | 0.425013 | 6_3:+6074550 | Msa0935470:CDS |
| AGAAATTCAAGGACACGTTT+GGG | 0.428428 | 6_3:+6073690 | Msa0935470:CDS |
| AGGTGATGTTCGTAATAGTT+GGG | 0.441309 | 6_3:+6072775 | Msa0935470:CDS |
| CGTTGAAGAGGTTGTATTGT+TGG | 0.442142 | 6_3:-6071070 | None:intergenic |
| AGATCTTCATCTTCCAAGTC+CGG | 0.445170 | 6_3:-6073197 | None:intergenic |
| TACAATAGGCCCAAGAGAAC+AGG | 0.445679 | 6_3:-6071023 | None:intergenic |
| GTCGGTGACGCTATCTTTGG+TGG | 0.446058 | 6_3:+6073716 | Msa0935470:CDS |
| TAAGAAAGTAATCAAAGTAT+TGG | 0.454515 | 6_3:+6074478 | Msa0935470:CDS |
| TTAGAAAGAATACCCGGACT+TGG | 0.458388 | 6_3:+6073184 | Msa0935470:intron |
| ATTCCTATGAATGATCTGAT+TGG | 0.459502 | 6_3:+6074076 | Msa0935470:CDS |
| TGACGCTATCTTTGGTGGAT+TGG | 0.460332 | 6_3:+6073721 | Msa0935470:CDS |
| TTCCAGCACTTTCATTGAAA+GGG | 0.464817 | 6_3:-6071169 | None:intergenic |
| ATTCACTCCATTGACAAGCT+TGG | 0.465544 | 6_3:+6070984 | Msa0935470:CDS |
| CTCATCAACCCTCTAATCAT+TGG | 0.467060 | 6_3:-6075569 | None:intergenic |
| CTTCCAGCACTTTCATTGAA+AGG | 0.467301 | 6_3:-6071170 | None:intergenic |
| GGTTGTATTGTTGGTGAAGA+TGG | 0.472509 | 6_3:-6071061 | None:intergenic |
| GTCTAATGGCCAAATACAAT+AGG | 0.476494 | 6_3:-6071037 | None:intergenic |
| GACCCTTTCAATGAAAGTGC+TGG | 0.479861 | 6_3:+6071167 | Msa0935470:CDS |
| TAGAAAGTACTGAAATAAAA+GGG | 0.480241 | 6_3:-6075656 | None:intergenic |
| AAGTATTGGAAGAGGTATAT+GGG | 0.482688 | 6_3:+6074492 | Msa0935470:CDS |
| CTAGTACCACAGAACATAGA+TGG | 0.488409 | 6_3:+6074214 | Msa0935470:CDS |
| GAGGAGCTTGATACACTAGT+AGG | 0.488654 | 6_3:+6074524 | Msa0935470:CDS |
| AGTCCAATCAGATCATTCAT+AGG | 0.489257 | 6_3:-6074079 | None:intergenic |
| TATTCCTTGTCATGGCATCT+AGG | 0.490057 | 6_3:+6074603 | Msa0935470:CDS |
| CCATATTCCAAGCTTGTCAA+TGG | 0.491674 | 6_3:-6070991 | None:intergenic |
| TGGATAGTTTCCAAGTGTTA+GGG | 0.492607 | 6_3:-6074176 | None:intergenic |
| ACTTCTGGTGCCCTAACACT+TGG | 0.493264 | 6_3:+6074166 | Msa0935470:CDS |
| ATGGCAGAGAAGAAGATAAA+GGG | 0.494420 | 6_3:+6074551 | Msa0935470:CDS |
| ACTAGGTTTCTGAGAAATGA+TGG | 0.495166 | 6_3:-6074196 | None:intergenic |
| AATTGGATTGTCTTTGTTTG+GGG | 0.496370 | 6_3:-6075138 | None:intergenic |
| ACCTTGTCCTTCTGATCCAC+AGG | 0.498358 | 6_3:-6071224 | None:intergenic |
| ACCCTTATCCAAAATGAAGA+TGG | 0.500959 | 6_3:+6072740 | Msa0935470:CDS |
| TAAAGATTGTGTGTCGAAAA+CGG | 0.502355 | 6_3:+6075332 | Msa0935470:three_prime_UTR |
| TCAATGTGTTAGCAGCTGCT+TGG | 0.503391 | 6_3:+6071529 | Msa0935470:CDS |
| GGCCCAAGAGAACAGGTAAA+CGG | 0.506089 | 6_3:-6071016 | None:intergenic |
| CTGTTTGTCCAACGTTGAAG+AGG | 0.509107 | 6_3:-6071082 | None:intergenic |
| AATGAAAGTGCTGGAAGTCA+AGG | 0.509134 | 6_3:+6071176 | Msa0935470:CDS |
| ACAAACAGCTGTAGGAGTTA+GGG | 0.512018 | 6_3:+6071097 | Msa0935470:CDS |
| CTAGGAATACGAAGATAAAG+TGG | 0.513359 | 6_3:-6075161 | None:intergenic |
| ATTATTGGGGAAGAAATTCA+AGG | 0.514441 | 6_3:+6073679 | Msa0935470:CDS |
| GTTGTTGAAGCCAGACCCTA+TGG | 0.516727 | 6_3:+6071452 | Msa0935470:intron |
| GCATACTCTTTGATTAGTGG+TGG | 0.519980 | 6_3:-6073884 | None:intergenic |
| GTGATTGATCGTCACCATCC+AGG | 0.520313 | 6_3:+6075062 | Msa0935470:CDS |
| AAGACAAAGGAAATTCCAAC+GGG | 0.522014 | 6_3:+6071845 | Msa0935470:CDS |
| AGTAATCAAAGTATTGGAAG+AGG | 0.523415 | 6_3:+6074484 | Msa0935470:CDS |
| TATAGTAATGAATAAAACTA+AGG | 0.524249 | 6_3:+6075469 | Msa0935470:three_prime_UTR |
| GATCTTCATCTTCCAAGTCC+GGG | 0.528153 | 6_3:-6073196 | None:intergenic |
| GCAAGAGCATTAGTGTCTAT+GGG | 0.528313 | 6_3:+6074136 | Msa0935470:CDS |
| ATGAATAAACCAGATAATCA+TGG | 0.529809 | 6_3:+6073749 | Msa0935470:CDS |
| AAACACAAAGGAAGAAGATA+AGG | 0.532191 | 6_3:-6075623 | None:intergenic |
| AAAACTGACACTTTGCTCGC+AGG | 0.535390 | 6_3:+6073296 | Msa0935470:CDS |
| AATGCAGACTCTTTAACTTG+AGG | 0.536382 | 6_3:+6075235 | Msa0935470:three_prime_UTR |
| TATCCATATAGAACTGCTGA+TGG | 0.540566 | 6_3:+6071134 | Msa0935470:CDS |
| AGTGTGAGGACATTCAAAGA+TGG | 0.548437 | 6_3:+6072692 | Msa0935470:CDS |
| TATTCTTCCTGTGGATCAGA+AGG | 0.548821 | 6_3:+6071217 | Msa0935470:CDS |
| CAATACAACCTCTTCAACGT+TGG | 0.548944 | 6_3:+6071074 | Msa0935470:CDS |
| TTGGTGAAGATGGCGTCTAA+TGG | 0.550915 | 6_3:-6071051 | None:intergenic |
| GGTTTCTATGAGATCAAGAC+TGG | 0.556307 | 6_3:+6071866 | Msa0935470:CDS |
| CAGTTTATAGGGATAGAGAG+AGG | 0.556436 | 6_3:+6074378 | Msa0935470:intron |
| GCTATCTTTGGTGGATTGGT+GGG | 0.556873 | 6_3:+6073725 | Msa0935470:CDS |
| GGTATATGGGAATGATGTTG+AGG | 0.562423 | 6_3:+6074505 | Msa0935470:CDS |
| AATGATCTGATTGGACTACC+AGG | 0.562984 | 6_3:+6074085 | Msa0935470:CDS |
| AAGAATAACCAATGATTAGA+GGG | 0.564207 | 6_3:+6075561 | Msa0935470:intron |
| GTGTGAGGACATTCAAAGAT+GGG | 0.566520 | 6_3:+6072693 | Msa0935470:CDS |
| AGAGATATATCTGCCACCCC+AGG | 0.569935 | 6_3:+6073848 | Msa0935470:CDS |
| ATTCAAGTTCTTGAAGACAA+AGG | 0.574896 | 6_3:+6071832 | Msa0935470:CDS |
| CAGGTCATATTAAATCATAT+AGG | 0.574979 | 6_3:-6075292 | None:intergenic |
| ATTCTTACCACCAAGGTGTA+CGG | 0.577040 | 6_3:-6071901 | None:intergenic |
| TGGAAGAAATATTCTTCCTG+TGG | 0.579019 | 6_3:+6071208 | Msa0935470:CDS |
| GATGTTCGTAATAGTTGGGC+TGG | 0.581972 | 6_3:+6072779 | Msa0935470:CDS |
| TGCTGTTTGTGATACTCTCA+AGG | 0.583075 | 6_3:+6072841 | Msa0935470:CDS |
| TTGATCTCATAGAAACCCGT+TGG | 0.589718 | 6_3:-6071860 | None:intergenic |
| TGCAAATCCTATCGAGGACA+AGG | 0.593780 | 6_3:-6074116 | None:intergenic |
| TGATTGGATAGATCATTTGG+AGG | 0.594755 | 6_3:+6071569 | Msa0935470:CDS |
| TCTGTGCCATCTATGTTCTG+TGG | 0.595744 | 6_3:-6074220 | None:intergenic |
| CATTGGCTTGCAACTTCACG+TGG | 0.599180 | 6_3:-6071797 | None:intergenic |
| CAAACATCCGTACACCTTGG+TGG | 0.599441 | 6_3:+6071894 | Msa0935470:CDS |
| TATTTAGGTATGGATTATTG+GGG | 0.600656 | 6_3:+6073666 | Msa0935470:intron |
| ACTTCTCTGTCATTCCTGGA+TGG | 0.601358 | 6_3:-6075076 | None:intergenic |
| GATTAATTACACATGTAGCA+AGG | 0.602751 | 6_3:-6070815 | None:intergenic |
| GAAGACAAAGGAAATTCCAA+CGG | 0.603567 | 6_3:+6071844 | Msa0935470:CDS |
| ATATGTTTATCTTCATTCTG+CGG | 0.603615 | 6_3:+6070764 | Msa0935470:CDS |
| CACAAAGGAAGAAGATAAGG+TGG | 0.606753 | 6_3:-6075620 | None:intergenic |
| CACAGAAAGATCTGATCATG+TGG | 0.608280 | 6_3:+6074237 | Msa0935470:CDS |
| TGATACACTAGTAGGTCTCA+TGG | 0.608626 | 6_3:+6074532 | Msa0935470:CDS |
| ATGAAAGTGCTGGAAGTCAA+GGG | 0.608733 | 6_3:+6071177 | Msa0935470:CDS |
| ACTTTATTAGAAAGAATACC+CGG | 0.610326 | 6_3:+6073178 | Msa0935470:intron |
| ATGCAAACATCCGTACACCT+TGG | 0.610700 | 6_3:+6071891 | Msa0935470:CDS |
| AAGTCACCAATCTAGCATAA+CGG | 0.612230 | 6_3:-6073223 | None:intergenic |
| TGCACTTTGAAGGAGGCTAG+AGG | 0.616682 | 6_3:+6074950 | Msa0935470:intron |
| GTGTGTCGAAAACGGTGTGT+TGG | 0.618906 | 6_3:+6075340 | Msa0935470:three_prime_UTR |
| ATTGGATTGTCTTTGTTTGG+GGG | 0.624854 | 6_3:-6075137 | None:intergenic |
| TTTCACAAGCAACTTCAATG+AGG | 0.625396 | 6_3:+6074983 | Msa0935470:CDS |
| TCCTGTGGATCAGAAGGACA+AGG | 0.625807 | 6_3:+6071223 | Msa0935470:CDS |
| TTTACCTAGATGCCATGACA+AGG | 0.626815 | 6_3:-6074607 | None:intergenic |
| AAGGACACGTTTGGGCATGT+CGG | 0.629216 | 6_3:+6073698 | Msa0935470:CDS |
| ATAAGGTGGAACCTTGAACA+AGG | 0.632563 | 6_3:-6075606 | None:intergenic |
| AACGTTGGACAAACAGCTGT+AGG | 0.633142 | 6_3:+6071089 | Msa0935470:CDS |
| TGCTCTTGCAAATCCTATCG+AGG | 0.634463 | 6_3:-6074122 | None:intergenic |
| ATCCAGGAATGACAGAGAAG+TGG | 0.637997 | 6_3:+6075078 | Msa0935470:CDS |
| AACTAAGGATGAAATGAGTG+TGG | 0.638514 | 6_3:+6075484 | Msa0935470:three_prime_UTR |
| GGAAAATATTCTTACCACCA+AGG | 0.641196 | 6_3:-6071908 | None:intergenic |
| GTGGAACCTTGAACAAGGAG+AGG | 0.652085 | 6_3:-6075601 | None:intergenic |
| TCAAATGCAGAGAATCAGGT+AGG | 0.656077 | 6_3:-6073826 | None:intergenic |
| AAGATCTGATCATGTGGACA+TGG | 0.657118 | 6_3:+6074243 | Msa0935470:CDS |
| TGAGTCTCGTTAAATCAATG+TGG | 0.659427 | 6_3:+6075267 | Msa0935470:three_prime_UTR |
| GTTGAAGCCAGACCCTATGG+TGG | 0.686319 | 6_3:+6071455 | Msa0935470:CDS |
| GGAAAAGTACTGAAACACAA+AGG | 0.692177 | 6_3:-6075635 | None:intergenic |
| TCACACTATAGATTGGACTG+TGG | 0.742224 | 6_3:+6073265 | Msa0935470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTATATCAAAAAAATTAT+TGG | - | chr6_3:6071639-6071658 | None:intergenic | 10.0% |
| !!! | TTTTATATTCATTAATTATG+TGG | + | chr6_3:6073469-6073488 | Msa0935470:intron | 10.0% |
| !!! | CAAAAAATTTGATTTTATTT+AGG | + | chr6_3:6073651-6073670 | Msa0935470:intron | 10.0% |
| !! | AGTAAAATAAATACATATTA+TGG | + | chr6_3:6074910-6074929 | Msa0935470:intron | 10.0% |
| !!! | CTATATGAAATTCTTTTTAA+TGG | + | chr6_3:6070949-6070968 | Msa0935470:intron | 15.0% |
| !!! | TTTTCAAAAAATAAAAAGTG+TGG | + | chr6_3:6071362-6071381 | Msa0935470:intron | 15.0% |
| !!! | TATAGTCTTAAAAAGTTTTA+GGG | - | chr6_3:6071409-6071428 | None:intergenic | 15.0% |
| !! | ATACATATATGATTAAAGAA+TGG | + | chr6_3:6071960-6071979 | Msa0935470:intron | 15.0% |
| !!! | ATTGTTGTTTTTATATATCT+AGG | + | chr6_3:6072522-6072541 | Msa0935470:intron | 15.0% |
| !! | AATTACTAGACAAAATTATA+TGG | - | chr6_3:6072549-6072568 | None:intergenic | 15.0% |
| !! | TTTCTATACTTATATTCTTT+AGG | - | chr6_3:6073596-6073615 | None:intergenic | 15.0% |
| !!! | AAATCAAATTTTTTGAAACA+CGG | - | chr6_3:6073646-6073665 | None:intergenic | 15.0% |
| !!! | AATTTGATTTTATTTAGGTA+TGG | + | chr6_3:6073656-6073675 | Msa0935470:intron | 15.0% |
| !!! | AAAAAAAGTTATATCTCTTT+TGG | + | chr6_3:6074042-6074061 | Msa0935470:intron | 15.0% |
| !! | ACACATAAAAAAAAATGAAA+TGG | - | chr6_3:6074315-6074334 | None:intergenic | 15.0% |
| !! | TTATAATGTGATCATATAAA+TGG | + | chr6_3:6074353-6074372 | Msa0935470:intron | 15.0% |
| !!! | TAATATTTCTCTAAGATAAT+TGG | + | chr6_3:6074767-6074786 | Msa0935470:intron | 15.0% |
| !!! | TAATTTTTATAAAGTTCTCA+AGG | + | chr6_3:6074833-6074852 | Msa0935470:intron | 15.0% |
| !! | TAATTAGTTGAAATTTAAAC+AGG | - | chr6_3:6075314-6075333 | None:intergenic | 15.0% |
| !!! | TTAGTTTTATTCATTACTAT+AGG | - | chr6_3:6075470-6075489 | None:intergenic | 15.0% |
| !! | TATAGTAATGAATAAAACTA+AGG | + | chr6_3:6075469-6075488 | Msa0935470:three_prime_UTR | 15.0% |
| !! | AATTTCATATAGTTAGTTAG+AGG | - | chr6_3:6070941-6070960 | None:intergenic | 20.0% |
| !! | TTCTATATGGATAATCATTA+GGG | - | chr6_3:6071127-6071146 | None:intergenic | 20.0% |
| !! | ACTTTAGTTAAGAGAATATT+TGG | + | chr6_3:6071299-6071318 | Msa0935470:intron | 20.0% |
| !!! | GTATAGTCTTAAAAAGTTTT+AGG | - | chr6_3:6071410-6071429 | None:intergenic | 20.0% |
| !!! | ACTTTTTAAGACTATACAAT+TGG | + | chr6_3:6071413-6071432 | Msa0935470:intron | 20.0% |
| !! | TTCAATTTATGATACATGAT+TGG | + | chr6_3:6071553-6071572 | Msa0935470:CDS | 20.0% |
| !! | TATGAGAATCTATAATATGA+TGG | + | chr6_3:6071665-6071684 | Msa0935470:intron | 20.0% |
| !! | TTATATATAAATGATTGCGA+TGG | - | chr6_3:6072098-6072117 | None:intergenic | 20.0% |
| !! | TTATATATAAATGATTGCGA+TGG | - | chr6_3:6072098-6072117 | None:intergenic | 20.0% |
| !! | CATGAAACTATATGATAAAA+GGG | + | chr6_3:6072628-6072647 | Msa0935470:intron | 20.0% |
| !! | ATTGTGTTCTTGAATAAAAA+GGG | - | chr6_3:6072822-6072841 | None:intergenic | 20.0% |
| !! | AGATATATGTATTACACTTA+CGG | - | chr6_3:6073403-6073422 | None:intergenic | 20.0% |
| !!! | TTTATTTAGGTATGGATTAT+TGG | + | chr6_3:6073664-6073683 | Msa0935470:intron | 20.0% |
| !!! | TTATTTAGGTATGGATTATT+GGG | + | chr6_3:6073665-6073684 | Msa0935470:intron | 20.0% |
| !! | AATATCAATGCAGTTAATAA+GGG | - | chr6_3:6073943-6073962 | None:intergenic | 20.0% |
| !! | TAATATCAATGCAGTTAATA+AGG | - | chr6_3:6073944-6073963 | None:intergenic | 20.0% |
| !!! | TGAAATGGTCTTAAAAATAA+AGG | - | chr6_3:6074300-6074319 | None:intergenic | 20.0% |
| !! | TCTTCTAAATTGATTATATC+TGG | - | chr6_3:6074411-6074430 | None:intergenic | 20.0% |
| !! | TATTGATACCTATTTCAAAA+TGG | + | chr6_3:6074438-6074457 | Msa0935470:CDS | 20.0% |
| !! | ATTGATACCTATTTCAAAAT+GGG | + | chr6_3:6074439-6074458 | Msa0935470:CDS | 20.0% |
| !! | TAAGAAAGTAATCAAAGTAT+TGG | + | chr6_3:6074478-6074497 | Msa0935470:CDS | 20.0% |
| !! | ATTAGAGTTTAATCATTGTA+CGG | - | chr6_3:6074817-6074836 | None:intergenic | 20.0% |
| !!! | TAGAAAGTACTGAAATAAAA+GGG | - | chr6_3:6075659-6075678 | None:intergenic | 20.0% |
| !!! | ATAGAAAGTACTGAAATAAA+AGG | - | chr6_3:6075660-6075679 | None:intergenic | 20.0% |
| ! | ATATGTTTATCTTCATTCTG+CGG | + | chr6_3:6070764-6070783 | Msa0935470:CDS | 25.0% |
| ! | GTTCTATATGGATAATCATT+AGG | - | chr6_3:6071128-6071147 | None:intergenic | 25.0% |
| !! | AAGAACTTGAATGATTTTAG+TGG | - | chr6_3:6071824-6071843 | None:intergenic | 25.0% |
| ! | TCAATCAATGCTTATGTATA+TGG | - | chr6_3:6071932-6071951 | None:intergenic | 25.0% |
| !! | CTGATAATGTGTTTATAAGT+GGG | + | chr6_3:6072171-6072190 | Msa0935470:intron | 25.0% |
| !! | TGATAATGTGTTTATAAGTG+GGG | + | chr6_3:6072172-6072191 | Msa0935470:intron | 25.0% |
| !!! | TGATAATGACCATTTTACAA+CGG | + | chr6_3:6072408-6072427 | Msa0935470:intron | 25.0% |
| ! | GCATGAAACTATATGATAAA+AGG | + | chr6_3:6072627-6072646 | Msa0935470:intron | 25.0% |
| ! | AAACTATATGATAAAAGGGA+TGG | + | chr6_3:6072632-6072651 | Msa0935470:intron | 25.0% |
| ! | AAGTTAAAAATATCAGAGGA+TGG | + | chr6_3:6072716-6072735 | Msa0935470:CDS | 25.0% |
| ! | CATTGTGTTCTTGAATAAAA+AGG | - | chr6_3:6072823-6072842 | None:intergenic | 25.0% |
| ! | TGACATATGTTTCAATTTCT+AGG | - | chr6_3:6072912-6072931 | None:intergenic | 25.0% |
| !! | TATCATCACTTTCTTTTCTA+GGG | - | chr6_3:6072959-6072978 | None:intergenic | 25.0% |
| !! | ATATCATCACTTTCTTTTCT+AGG | - | chr6_3:6072960-6072979 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTGTTAACGATC+TGG | + | chr6_3:6072979-6072998 | Msa0935470:intron | 25.0% |
| ! | ACTTTATTAGAAAGAATACC+CGG | + | chr6_3:6073178-6073197 | Msa0935470:intron | 25.0% |
| ! | AAACTCGAAAATTAACTAGA+GGG | - | chr6_3:6073368-6073387 | None:intergenic | 25.0% |
| ! | TAAACTCGAAAATTAACTAG+AGG | - | chr6_3:6073369-6073388 | None:intergenic | 25.0% |
| !! | TATTTAGGTATGGATTATTG+GGG | + | chr6_3:6073666-6073685 | Msa0935470:intron | 25.0% |
| ! | ATGAATAAACCAGATAATCA+TGG | + | chr6_3:6073749-6073768 | Msa0935470:CDS | 25.0% |
| !! | ATGTTGGTGCAAAAATATTT+TGG | - | chr6_3:6073909-6073928 | None:intergenic | 25.0% |
| !! | AAGGGTATAATAAGTTATGT+TGG | - | chr6_3:6073925-6073944 | None:intergenic | 25.0% |
| !!! | AAGTGACAATTATTTTGAGA+CGG | + | chr6_3:6073966-6073985 | Msa0935470:intron | 25.0% |
| !! | TATCTCTTTTGGTATTATAC+AGG | + | chr6_3:6074053-6074072 | Msa0935470:intron | 25.0% |
| ! | ATATAAATGGTGCAGTTTAT+AGG | + | chr6_3:6074366-6074385 | Msa0935470:intron | 25.0% |
| ! | TATAAATGGTGCAGTTTATA+GGG | + | chr6_3:6074367-6074386 | Msa0935470:intron | 25.0% |
| !!! | AAATCTTCCCATTTTGAAAT+AGG | - | chr6_3:6074449-6074468 | None:intergenic | 25.0% |
| !! | TTTTGTAATATTCCTTGTCA+TGG | + | chr6_3:6074595-6074614 | Msa0935470:CDS | 25.0% |
| ! | TATAAATATTTGTGTGTCTC+AGG | + | chr6_3:6074736-6074755 | Msa0935470:intron | 25.0% |
| ! | ATAAATATTTGTGTGTCTCA+GGG | + | chr6_3:6074737-6074756 | Msa0935470:intron | 25.0% |
| ! | TAAAGTTCTCAAGGAATATT+AGG | + | chr6_3:6074842-6074861 | Msa0935470:intron | 25.0% |
| !! | TTAGCACAAAGTATTATACT+AGG | + | chr6_3:6074869-6074888 | Msa0935470:intron | 25.0% |
| !! | TAGCACAAAGTATTATACTA+GGG | + | chr6_3:6074870-6074889 | Msa0935470:intron | 25.0% |
| ! | CTTAGTCAAGTTAATTAACT+AGG | - | chr6_3:6075182-6075201 | None:intergenic | 25.0% |
| ! | CAGGTCATATTAAATCATAT+AGG | - | chr6_3:6075295-6075314 | None:intergenic | 25.0% |
| ! | GTATGTAATGTATTCATGTT+AGG | + | chr6_3:6075416-6075435 | Msa0935470:intron | 25.0% |
| ! | AAGAATAACCAATGATTAGA+GGG | + | chr6_3:6075561-6075580 | Msa0935470:intron | 25.0% |
| ! | TACTTTCTATTTCCATGAAA+TGG | + | chr6_3:6075670-6075689 | Msa0935470:three_prime_UTR | 25.0% |
| ! | AGAAACTAGATTTACTAGTA+TGG | - | chr6_3:6075704-6075723 | None:intergenic | 25.0% |
| GATTAATTACACATGTAGCA+AGG | - | chr6_3:6070818-6070837 | None:intergenic | 30.0% | |
| ! | AGTGTGGACTAAAAATGTTA+AGG | + | chr6_3:6071378-6071397 | Msa0935470:intron | 30.0% |
| ! | TTTTCTCTCCAAAAGTTTTG+TGG | - | chr6_3:6071484-6071503 | None:intergenic | 30.0% |
| TTTGGAGAGAAAAACATTTC+AGG | + | chr6_3:6071491-6071510 | Msa0935470:CDS | 30.0% | |
| AGAAAAACATTTCAGGACAA+TGG | + | chr6_3:6071498-6071517 | Msa0935470:CDS | 30.0% | |
| GAAAAACATTTCAGGACAAT+GGG | + | chr6_3:6071499-6071518 | Msa0935470:CDS | 30.0% | |
| ACATGATTGGATAGATCATT+TGG | + | chr6_3:6071566-6071585 | Msa0935470:CDS | 30.0% | |
| !! | TGAATGATTTTAGTGGACAT+TGG | - | chr6_3:6071817-6071836 | None:intergenic | 30.0% |
| ! | ATTCAAGTTCTTGAAGACAA+AGG | + | chr6_3:6071832-6071851 | Msa0935470:CDS | 30.0% |
| ! | CGTTAATGACCATTTTACAA+CGG | + | chr6_3:6072006-6072025 | Msa0935470:intron | 30.0% |
| ! | GATCCATCTAATTTTCCAAT+AGG | + | chr6_3:6072141-6072160 | Msa0935470:intron | 30.0% |
| TCACCTATTGGAAAATTAGA+TGG | - | chr6_3:6072147-6072166 | None:intergenic | 30.0% | |
| CCACTTATAAACACATTATC+AGG | - | chr6_3:6072173-6072192 | None:intergenic | 30.0% | |
| ! | CCTGATAATGTGTTTATAAG+TGG | + | chr6_3:6072170-6072189 | Msa0935470:intron | 30.0% |
| CCATCTTAGAAATTGTGATT+GGG | - | chr6_3:6072240-6072259 | None:intergenic | 30.0% | |
| ACCATCTTAGAAATTGTGAT+TGG | - | chr6_3:6072241-6072260 | None:intergenic | 30.0% | |
| GTTGTAAAATGGTCATTATC+AGG | - | chr6_3:6072409-6072428 | None:intergenic | 30.0% | |
| CATGTGTAAGTTCAATTAGA+AGG | - | chr6_3:6072603-6072622 | None:intergenic | 30.0% | |
| TGGGAAGTTAAAAATATCAG+AGG | + | chr6_3:6072712-6072731 | Msa0935470:CDS | 30.0% | |
| ! | TCCATCTTCATTTTGGATAA+GGG | - | chr6_3:6072744-6072763 | None:intergenic | 30.0% |
| GGTATGTATAATGTTGATCT+TGG | + | chr6_3:6072862-6072881 | Msa0935470:intron | 30.0% | |
| ACTGAGAGATAAGTAAAACA+TGG | + | chr6_3:6073039-6073058 | Msa0935470:intron | 30.0% | |
| TCTTCTGAATAATTCGTCAT+TGG | + | chr6_3:6073097-6073116 | Msa0935470:intron | 30.0% | |
| CAAAGATTCACACTATAGAT+TGG | + | chr6_3:6073258-6073277 | Msa0935470:CDS | 30.0% | |
| ATTATTGGGGAAGAAATTCA+AGG | + | chr6_3:6073679-6073698 | Msa0935470:CDS | 30.0% | |
| AATTCTTCAGTTAGAGAGTA+TGG | - | chr6_3:6073779-6073798 | None:intergenic | 30.0% | |
| AAGAATTTGTCAGTGTCTAT+AGG | + | chr6_3:6073792-6073811 | Msa0935470:CDS | 30.0% | |
| ATTCCTATGAATGATCTGAT+TGG | + | chr6_3:6074076-6074095 | Msa0935470:CDS | 30.0% | |
| ! | TGGTCTTAAAAATAAAGGTG+TGG | - | chr6_3:6074295-6074314 | None:intergenic | 30.0% |
| !! | AGTAATCAAAGTATTGGAAG+AGG | + | chr6_3:6074484-6074503 | Msa0935470:CDS | 30.0% |
| !! | AAAGTATTGGAAGAGGTATA+TGG | + | chr6_3:6074491-6074510 | Msa0935470:CDS | 30.0% |
| !! | AAGTATTGGAAGAGGTATAT+GGG | + | chr6_3:6074492-6074511 | Msa0935470:CDS | 30.0% |
| ! | AATTGGATTGTCTTTGTTTG+GGG | - | chr6_3:6075141-6075160 | None:intergenic | 30.0% |
| ! | GAATTGGATTGTCTTTGTTT+GGG | - | chr6_3:6075142-6075161 | None:intergenic | 30.0% |
| ATACGAAGATAAAGTGGAAT+TGG | - | chr6_3:6075158-6075177 | None:intergenic | 30.0% | |
| TAAAGATTGTGTGTCGAAAA+CGG | + | chr6_3:6075332-6075351 | Msa0935470:three_prime_UTR | 30.0% | |
| ACTCATCTAGAAGAAAAGAA+TGG | + | chr6_3:6075509-6075528 | Msa0935470:intron | 30.0% | |
| CAAGAATAACCAATGATTAG+AGG | + | chr6_3:6075560-6075579 | Msa0935470:intron | 30.0% | |
| AAACACAAAGGAAGAAGATA+AGG | - | chr6_3:6075626-6075645 | None:intergenic | 30.0% | |
| ATGGAATCATATCCATTTCA+TGG | - | chr6_3:6075685-6075704 | None:intergenic | 30.0% | |
| GTCTAATGGCCAAATACAAT+AGG | - | chr6_3:6071040-6071059 | None:intergenic | 35.0% | |
| TATCCATATAGAACTGCTGA+TGG | + | chr6_3:6071134-6071153 | Msa0935470:CDS | 35.0% | |
| TTTCCATCAGCAGTTCTATA+TGG | - | chr6_3:6071140-6071159 | None:intergenic | 35.0% | |
| TTCCAGCACTTTCATTGAAA+GGG | - | chr6_3:6071172-6071191 | None:intergenic | 35.0% | |
| TGGAAGAAATATTCTTCCTG+TGG | + | chr6_3:6071208-6071227 | Msa0935470:CDS | 35.0% | |
| TGATTGGATAGATCATTTGG+AGG | + | chr6_3:6071569-6071588 | Msa0935470:CDS | 35.0% | |
| GAAGACAAAGGAAATTCCAA+CGG | + | chr6_3:6071844-6071863 | Msa0935470:CDS | 35.0% | |
| AAGACAAAGGAAATTCCAAC+GGG | + | chr6_3:6071845-6071864 | Msa0935470:CDS | 35.0% | |
| GGAAAATATTCTTACCACCA+AGG | - | chr6_3:6071911-6071930 | None:intergenic | 35.0% | |
| TCATTGAGACCGTTGTAAAA+TGG | - | chr6_3:6072018-6072037 | None:intergenic | 35.0% | |
| ATTATCAGGTCATCACCTAT+TGG | - | chr6_3:6072159-6072178 | None:intergenic | 35.0% | |
| ! | CCCAATCACAATTTCTAAGA+TGG | + | chr6_3:6072237-6072256 | Msa0935470:intron | 35.0% |
| GGTTCGTGGATATAAATTGT+GGG | - | chr6_3:6072323-6072342 | None:intergenic | 35.0% | |
| TGGTTCGTGGATATAAATTG+TGG | - | chr6_3:6072324-6072343 | None:intergenic | 35.0% | |
| TCATTGAGACCGTTGTAAAA+TGG | - | chr6_3:6072018-6072037 | None:intergenic | 35.0% | |
| ACAACGGTCTCAATGAAATT+TGG | + | chr6_3:6072424-6072443 | Msa0935470:intron | 35.0% | |
| !!! | AAGAAGTTTTGAACAGTGTG+AGG | + | chr6_3:6072678-6072697 | Msa0935470:CDS | 35.0% |
| ACCCTTATCCAAAATGAAGA+TGG | + | chr6_3:6072740-6072759 | Msa0935470:CDS | 35.0% | |
| ! | CTCCATCTTCATTTTGGATA+AGG | - | chr6_3:6072745-6072764 | None:intergenic | 35.0% |
| ! | TTGCTACTCCATCTTCATTT+TGG | - | chr6_3:6072751-6072770 | None:intergenic | 35.0% |
| AGGTGATGTTCGTAATAGTT+GGG | + | chr6_3:6072775-6072794 | Msa0935470:CDS | 35.0% | |
| !! | ATCTGGTTCTCATGAGAAAT+GGG | + | chr6_3:6072996-6073015 | Msa0935470:intron | 35.0% |
| ACATTAGTTCAATTCCTGAG+TGG | - | chr6_3:6073077-6073096 | None:intergenic | 35.0% | |
| TCTTTACCGTTATGCTAGAT+TGG | + | chr6_3:6073217-6073236 | Msa0935470:CDS | 35.0% | |
| AAGTCACCAATCTAGCATAA+CGG | - | chr6_3:6073226-6073245 | None:intergenic | 35.0% | |
| AAGAAATTCAAGGACACGTT+TGG | + | chr6_3:6073689-6073708 | Msa0935470:CDS | 35.0% | |
| AGAAATTCAAGGACACGTTT+GGG | + | chr6_3:6073690-6073709 | Msa0935470:CDS | 35.0% | |
| TATGGAACACCATGATTATC+TGG | - | chr6_3:6073761-6073780 | None:intergenic | 35.0% | |
| TTGGCATACTCTTTGATTAG+TGG | - | chr6_3:6073890-6073909 | None:intergenic | 35.0% | |
| AGTCCAATCAGATCATTCAT+AGG | - | chr6_3:6074082-6074101 | None:intergenic | 35.0% | |
| TGGATAGTTTCCAAGTGTTA+GGG | - | chr6_3:6074179-6074198 | None:intergenic | 35.0% | |
| ATGGATAGTTTCCAAGTGTT+AGG | - | chr6_3:6074180-6074199 | None:intergenic | 35.0% | |
| ! | ACTAGGTTTCTGAGAAATGA+TGG | - | chr6_3:6074199-6074218 | None:intergenic | 35.0% |
| ATGGCAGAGAAGAAGATAAA+GGG | + | chr6_3:6074551-6074570 | Msa0935470:CDS | 35.0% | |
| TGAACTTTCATGCACTTTGA+AGG | + | chr6_3:6074940-6074959 | Msa0935470:intron | 35.0% | |
| TTTCACAAGCAACTTCAATG+AGG | + | chr6_3:6074983-6075002 | Msa0935470:CDS | 35.0% | |
| TTCAAGTGCTTTCTCTGTTT+GGG | + | chr6_3:6075109-6075128 | Msa0935470:CDS | 35.0% | |
| ! | ATTGGATTGTCTTTGTTTGG+GGG | - | chr6_3:6075140-6075159 | None:intergenic | 35.0% |
| GGAATTGGATTGTCTTTGTT+TGG | - | chr6_3:6075143-6075162 | None:intergenic | 35.0% | |
| CTAGGAATACGAAGATAAAG+TGG | - | chr6_3:6075164-6075183 | None:intergenic | 35.0% | |
| !! | AATGCAGACTCTTTAACTTG+AGG | + | chr6_3:6075235-6075254 | Msa0935470:three_prime_UTR | 35.0% |
| TGAGTCTCGTTAAATCAATG+TGG | + | chr6_3:6075267-6075286 | Msa0935470:three_prime_UTR | 35.0% | |
| AACTAAGGATGAAATGAGTG+TGG | + | chr6_3:6075484-6075503 | Msa0935470:three_prime_UTR | 35.0% | |
| !! | GGAAAAGTACTGAAACACAA+AGG | - | chr6_3:6075638-6075657 | None:intergenic | 35.0% |
| ATTCACTCCATTGACAAGCT+TGG | + | chr6_3:6070984-6071003 | Msa0935470:CDS | 40.0% | |
| CCATATTCCAAGCTTGTCAA+TGG | - | chr6_3:6070994-6071013 | None:intergenic | 40.0% | |
| CCATTGACAAGCTTGGAATA+TGG | + | chr6_3:6070991-6071010 | Msa0935470:CDS | 40.0% | |
| TCTCTTGGGCCTATTGTATT+TGG | + | chr6_3:6071028-6071047 | Msa0935470:CDS | 40.0% | |
| ! | GGTTGTATTGTTGGTGAAGA+TGG | - | chr6_3:6071064-6071083 | None:intergenic | 40.0% |
| CGTTGAAGAGGTTGTATTGT+TGG | - | chr6_3:6071073-6071092 | None:intergenic | 40.0% | |
| CAATACAACCTCTTCAACGT+TGG | + | chr6_3:6071074-6071093 | Msa0935470:CDS | 40.0% | |
| ACAAACAGCTGTAGGAGTTA+GGG | + | chr6_3:6071097-6071116 | Msa0935470:CDS | 40.0% | |
| CTTCCAGCACTTTCATTGAA+AGG | - | chr6_3:6071173-6071192 | None:intergenic | 40.0% | |
| !! | AATGAAAGTGCTGGAAGTCA+AGG | + | chr6_3:6071176-6071195 | Msa0935470:CDS | 40.0% |
| !! | ATGAAAGTGCTGGAAGTCAA+GGG | + | chr6_3:6071177-6071196 | Msa0935470:CDS | 40.0% |
| TATTCTTCCTGTGGATCAGA+AGG | + | chr6_3:6071217-6071236 | Msa0935470:CDS | 40.0% | |
| TCATTTGGAGGACACTAATC+AGG | + | chr6_3:6071581-6071600 | Msa0935470:CDS | 40.0% | |
| TTGATCTCATAGAAACCCGT+TGG | - | chr6_3:6071863-6071882 | None:intergenic | 40.0% | |
| GGTTTCTATGAGATCAAGAC+TGG | + | chr6_3:6071866-6071885 | Msa0935470:CDS | 40.0% | |
| ATTCTTACCACCAAGGTGTA+CGG | - | chr6_3:6071904-6071923 | None:intergenic | 40.0% | |
| ACAACGGTCTCAATGAGATT+TGG | + | chr6_3:6072022-6072041 | Msa0935470:intron | 40.0% | |
| TGTTATCAGGTTTCCGCTAT+CGG | + | chr6_3:6072293-6072312 | Msa0935470:intron | 40.0% | |
| TCGTGGATATAAATTGTGGG+TGG | - | chr6_3:6072320-6072339 | None:intergenic | 40.0% | |
| GTGTGTTAAGAGTTCCACAT+CGG | + | chr6_3:6072370-6072389 | Msa0935470:intron | 40.0% | |
| TTAAGAGTTCCACATCGGAT+AGG | + | chr6_3:6072375-6072394 | Msa0935470:intron | 40.0% | |
| ! | AGGGATGGAAGTGTGATATA+TGG | + | chr6_3:6072647-6072666 | Msa0935470:intron | 40.0% |
| AGTGTGAGGACATTCAAAGA+TGG | + | chr6_3:6072692-6072711 | Msa0935470:CDS | 40.0% | |
| GTGTGAGGACATTCAAAGAT+GGG | + | chr6_3:6072693-6072712 | Msa0935470:CDS | 40.0% | |
| GAAGATGGAGTAGCAATTTC+AGG | + | chr6_3:6072755-6072774 | Msa0935470:CDS | 40.0% | |
| CAGGTGATGTTCGTAATAGT+TGG | + | chr6_3:6072774-6072793 | Msa0935470:CDS | 40.0% | |
| ! | TGCTGTTTGTGATACTCTCA+AGG | + | chr6_3:6072841-6072860 | Msa0935470:CDS | 40.0% |
| !! | GATCTGGTTCTCATGAGAAA+TGG | + | chr6_3:6072995-6073014 | Msa0935470:intron | 40.0% |
| ! | TTCTCATGAGAAATGGGTTC+CGG | + | chr6_3:6073002-6073021 | Msa0935470:intron | 40.0% |
| TTAGAAAGAATACCCGGACT+TGG | + | chr6_3:6073184-6073203 | Msa0935470:intron | 40.0% | |
| AGATCTTCATCTTCCAAGTC+CGG | - | chr6_3:6073200-6073219 | None:intergenic | 40.0% | |
| TCACACTATAGATTGGACTG+TGG | + | chr6_3:6073265-6073284 | Msa0935470:CDS | 40.0% | |
| !! | CGAGCAAAGTGTCAGTTTTA+AGG | - | chr6_3:6073295-6073314 | None:intergenic | 40.0% |
| TCAAATGCAGAGAATCAGGT+AGG | - | chr6_3:6073829-6073848 | None:intergenic | 40.0% | |
| TCTCTCAAATGCAGAGAATC+AGG | - | chr6_3:6073833-6073852 | None:intergenic | 40.0% | |
| !!! | TGGAGATTTGTTTTGTCCTG+GGG | - | chr6_3:6073867-6073886 | None:intergenic | 40.0% |
| !!! | GTGGAGATTTGTTTTGTCCT+GGG | - | chr6_3:6073868-6073887 | None:intergenic | 40.0% |
| GCATACTCTTTGATTAGTGG+TGG | - | chr6_3:6073887-6073906 | None:intergenic | 40.0% | |
| AATGATCTGATTGGACTACC+AGG | + | chr6_3:6074085-6074104 | Msa0935470:CDS | 40.0% | |
| GAAAAAACCTTGTCCTCGAT+AGG | + | chr6_3:6074109-6074128 | Msa0935470:CDS | 40.0% | |
| !! | TGCAAGAGCATTAGTGTCTA+TGG | + | chr6_3:6074135-6074154 | Msa0935470:CDS | 40.0% |
| !! | GCAAGAGCATTAGTGTCTAT+GGG | + | chr6_3:6074136-6074155 | Msa0935470:CDS | 40.0% |
| TCTATGGGTCATCAAACTTC+TGG | + | chr6_3:6074151-6074170 | Msa0935470:CDS | 40.0% | |
| CATCTATGTTCTGTGGTACT+AGG | - | chr6_3:6074216-6074235 | None:intergenic | 40.0% | |
| CTAGTACCACAGAACATAGA+TGG | + | chr6_3:6074214-6074233 | Msa0935470:CDS | 40.0% | |
| CACAGAAAGATCTGATCATG+TGG | + | chr6_3:6074237-6074256 | Msa0935470:CDS | 40.0% | |
| AAGATCTGATCATGTGGACA+TGG | + | chr6_3:6074243-6074262 | Msa0935470:CDS | 40.0% | |
| CAGTTTATAGGGATAGAGAG+AGG | + | chr6_3:6074378-6074397 | Msa0935470:intron | 40.0% | |
| GGTATATGGGAATGATGTTG+AGG | + | chr6_3:6074505-6074524 | Msa0935470:CDS | 40.0% | |
| TGATACACTAGTAGGTCTCA+TGG | + | chr6_3:6074532-6074551 | Msa0935470:CDS | 40.0% | |
| CATGGCAGAGAAGAAGATAA+AGG | + | chr6_3:6074550-6074569 | Msa0935470:CDS | 40.0% | |
| TATTCCTTGTCATGGCATCT+AGG | + | chr6_3:6074603-6074622 | Msa0935470:CDS | 40.0% | |
| TTTACCTAGATGCCATGACA+AGG | - | chr6_3:6074610-6074629 | None:intergenic | 40.0% | |
| ! | ACTTTCATGCACTTTGAAGG+AGG | + | chr6_3:6074943-6074962 | Msa0935470:intron | 40.0% |
| TGAGGAGACATACACCAAAA+AGG | + | chr6_3:6075001-6075020 | Msa0935470:CDS | 40.0% | |
| GAGGAGACATACACCAAAAA+GGG | + | chr6_3:6075002-6075021 | Msa0935470:CDS | 40.0% | |
| GACATACACCAAAAAGGGTT+TGG | + | chr6_3:6075007-6075026 | Msa0935470:CDS | 40.0% | |
| ACACCAAAAAGGGTTTGGAA+TGG | + | chr6_3:6075012-6075031 | Msa0935470:CDS | 40.0% | |
| ! | CACCAAAAAGGGTTTGGAAT+GGG | + | chr6_3:6075013-6075032 | Msa0935470:CDS | 40.0% |
| GAACACAACTGAGAGCTTAA+AGG | + | chr6_3:6075037-6075056 | Msa0935470:CDS | 40.0% | |
| CTTCAAGTGCTTTCTCTGTT+TGG | + | chr6_3:6075108-6075127 | Msa0935470:CDS | 40.0% | |
| AGAAGAAAAGAATGGAGAGC+TGG | + | chr6_3:6075517-6075536 | Msa0935470:intron | 40.0% | |
| GCTGGAAAATGATCATGAAC+TGG | + | chr6_3:6075535-6075554 | Msa0935470:intron | 40.0% | |
| CTCATCAACCCTCTAATCAT+TGG | - | chr6_3:6075572-6075591 | None:intergenic | 40.0% | |
| ATAAGGTGGAACCTTGAACA+AGG | - | chr6_3:6075609-6075628 | None:intergenic | 40.0% | |
| CACAAAGGAAGAAGATAAGG+TGG | - | chr6_3:6075623-6075642 | None:intergenic | 40.0% | |
| CACCGTTTACCTGTTCTCTT+GGG | + | chr6_3:6071014-6071033 | Msa0935470:CDS | 45.0% | |
| TACAATAGGCCCAAGAGAAC+AGG | - | chr6_3:6071026-6071045 | None:intergenic | 45.0% | |
| TTGGTGAAGATGGCGTCTAA+TGG | - | chr6_3:6071054-6071073 | None:intergenic | 45.0% | |
| CTGTTTGTCCAACGTTGAAG+AGG | - | chr6_3:6071085-6071104 | None:intergenic | 45.0% | |
| AACGTTGGACAAACAGCTGT+AGG | + | chr6_3:6071089-6071108 | Msa0935470:CDS | 45.0% | |
| GACAAACAGCTGTAGGAGTT+AGG | + | chr6_3:6071096-6071115 | Msa0935470:CDS | 45.0% | |
| ! | GACCCTTTCAATGAAAGTGC+TGG | + | chr6_3:6071167-6071186 | Msa0935470:CDS | 45.0% |
| GGAAGTCAAGGGTCTTTCAT+TGG | + | chr6_3:6071188-6071207 | Msa0935470:CDS | 45.0% | |
| ! | GTTTTGTGGCTACCACCATA+GGG | - | chr6_3:6071470-6071489 | None:intergenic | 45.0% |
| !! | AGTTTTGTGGCTACCACCAT+AGG | - | chr6_3:6071471-6071490 | None:intergenic | 45.0% |
| ! | GGTGGTAGCCACAAAACTTT+TGG | + | chr6_3:6071473-6071492 | Msa0935470:CDS | 45.0% |
| TCAATGTGTTAGCAGCTGCT+TGG | + | chr6_3:6071529-6071548 | Msa0935470:CDS | 45.0% | |
| ATGCAAACATCCGTACACCT+TGG | + | chr6_3:6071891-6071910 | Msa0935470:CDS | 45.0% | |
| GCTTCACAATCCGACTTTGT+GGG | + | chr6_3:6072203-6072222 | Msa0935470:intron | 45.0% | |
| CTTCACAATCCGACTTTGTG+GGG | + | chr6_3:6072204-6072223 | Msa0935470:intron | 45.0% | |
| CTAACACAACCCCACAAAGT+CGG | - | chr6_3:6072216-6072235 | None:intergenic | 45.0% | |
| ATCAGAGCCTCTCCAAGATT+AGG | + | chr6_3:6072265-6072284 | Msa0935470:intron | 45.0% | |
| GATAACAGGTGGCCTAATCT+TGG | - | chr6_3:6072280-6072299 | None:intergenic | 45.0% | |
| AGATTAGGCCACCTGTTATC+AGG | + | chr6_3:6072280-6072299 | Msa0935470:intron | 45.0% | |
| !! | GATAGCGGAAACCTGATAAC+AGG | - | chr6_3:6072294-6072313 | None:intergenic | 45.0% |
| GTTATCAGGTTTCCGCTATC+GGG | + | chr6_3:6072294-6072313 | Msa0935470:intron | 45.0% | |
| TCCACATCGGATAGGTGATA+TGG | + | chr6_3:6072383-6072402 | Msa0935470:intron | 45.0% | |
| GATGTTCGTAATAGTTGGGC+TGG | + | chr6_3:6072779-6072798 | Msa0935470:CDS | 45.0% | |
| ! | AGAAATGGGTTCCGGTAATC+CGG | + | chr6_3:6073010-6073029 | Msa0935470:intron | 45.0% |
| CTTATCTCTCAGTCAGACTC+CGG | - | chr6_3:6073032-6073051 | None:intergenic | 45.0% | |
| GGTCAAGAATTGTTCCACTC+AGG | + | chr6_3:6073060-6073079 | Msa0935470:intron | 45.0% | |
| GATCTTCATCTTCCAAGTCC+GGG | - | chr6_3:6073199-6073218 | None:intergenic | 45.0% | |
| AAAACTGACACTTTGCTCGC+AGG | + | chr6_3:6073296-6073315 | Msa0935470:CDS | 45.0% | |
| ! | TGACGCTATCTTTGGTGGAT+TGG | + | chr6_3:6073721-6073740 | Msa0935470:CDS | 45.0% |
| !! | GCTATCTTTGGTGGATTGGT+GGG | + | chr6_3:6073725-6073744 | Msa0935470:CDS | 45.0% |
| !!! | AGATTTGTTTTGTCCTGGGG+TGG | - | chr6_3:6073864-6073883 | None:intergenic | 45.0% |
| !!! | GGTGGAGATTTGTTTTGTCC+TGG | - | chr6_3:6073869-6073888 | None:intergenic | 45.0% |
| !!! | GAGGACAAGGTTTTTTCTCC+TGG | - | chr6_3:6074106-6074125 | None:intergenic | 45.0% |
| TGCAAATCCTATCGAGGACA+AGG | - | chr6_3:6074119-6074138 | None:intergenic | 45.0% | |
| TGCTCTTGCAAATCCTATCG+AGG | - | chr6_3:6074125-6074144 | None:intergenic | 45.0% | |
| TCTGTGCCATCTATGTTCTG+TGG | - | chr6_3:6074223-6074242 | None:intergenic | 45.0% | |
| GAGGAGCTTGATACACTAGT+AGG | + | chr6_3:6074524-6074543 | Msa0935470:CDS | 45.0% | |
| ! | CACCCATTCCAAACCCTTTT+TGG | - | chr6_3:6075018-6075037 | None:intergenic | 45.0% |
| ACTTCTCTGTCATTCCTGGA+TGG | - | chr6_3:6075079-6075098 | None:intergenic | 45.0% | |
| ATCCAGGAATGACAGAGAAG+TGG | + | chr6_3:6075078-6075097 | Msa0935470:CDS | 45.0% | |
| AACCACTTCTCTGTCATTCC+TGG | - | chr6_3:6075083-6075102 | None:intergenic | 45.0% | |
| TTGCATCCTCTCCTTGTTCA+AGG | + | chr6_3:6075595-6075614 | Msa0935470:three_prime_UTR | 45.0% | |
| GCACCGTTTACCTGTTCTCT+TGG | + | chr6_3:6071013-6071032 | Msa0935470:CDS | 50.0% | |
| GGCCCAAGAGAACAGGTAAA+CGG | - | chr6_3:6071019-6071038 | None:intergenic | 50.0% | |
| TCCTGTGGATCAGAAGGACA+AGG | + | chr6_3:6071223-6071242 | Msa0935470:CDS | 50.0% | |
| ACCTTGTCCTTCTGATCCAC+AGG | - | chr6_3:6071227-6071246 | None:intergenic | 50.0% | |
| GTTGTTGAAGCCAGACCCTA+TGG | + | chr6_3:6071452-6071471 | Msa0935470:intron | 50.0% | |
| !! | CATTGGCTTGCAACTTCACG+TGG | - | chr6_3:6071800-6071819 | None:intergenic | 50.0% |
| CAAACATCCGTACACCTTGG+TGG | + | chr6_3:6071894-6071913 | Msa0935470:CDS | 50.0% | |
| CAAAGTCGGATTGTGAAGCG+AGG | - | chr6_3:6072202-6072221 | None:intergenic | 50.0% | |
| CGCTTCACAATCCGACTTTG+TGG | + | chr6_3:6072202-6072221 | Msa0935470:intron | 50.0% | |
| CGACTTTGTGGGGTTGTGTT+AGG | + | chr6_3:6072214-6072233 | Msa0935470:intron | 50.0% | |
| AGCGGAAACCTGATAACAGG+TGG | - | chr6_3:6072291-6072310 | None:intergenic | 50.0% | |
| ! | GCACTATTAGGCTTGGTTCG+TGG | - | chr6_3:6072337-6072356 | None:intergenic | 50.0% |
| CGAACCAAGCCTAATAGTGC+TGG | + | chr6_3:6072337-6072356 | Msa0935470:intron | 50.0% | |
| ACGACCAGCACTATTAGGCT+TGG | - | chr6_3:6072344-6072363 | None:intergenic | 50.0% | |
| !! | CCTAATAGTGCTGGTCGTGA+GGG | + | chr6_3:6072346-6072365 | Msa0935470:intron | 50.0% |
| !! | CTAATAGTGCTGGTCGTGAG+GGG | + | chr6_3:6072347-6072366 | Msa0935470:intron | 50.0% |
| !! | TAATAGTGCTGGTCGTGAGG+GGG | + | chr6_3:6072348-6072367 | Msa0935470:intron | 50.0% |
| GCCATATCACCTATCCGATG+TGG | - | chr6_3:6072387-6072406 | None:intergenic | 50.0% | |
| TCAGTCAGACTCCGGATTAC+CGG | - | chr6_3:6073024-6073043 | None:intergenic | 50.0% | |
| AAGGACACGTTTGGGCATGT+CGG | + | chr6_3:6073698-6073717 | Msa0935470:CDS | 50.0% | |
| CATGTCGGTGACGCTATCTT+TGG | + | chr6_3:6073713-6073732 | Msa0935470:CDS | 50.0% | |
| !! | CGCTATCTTTGGTGGATTGG+TGG | + | chr6_3:6073724-6073743 | Msa0935470:CDS | 50.0% |
| AGAGATATATCTGCCACCCC+AGG | + | chr6_3:6073848-6073867 | Msa0935470:CDS | 50.0% | |
| ACTTCTGGTGCCCTAACACT+TGG | + | chr6_3:6074166-6074185 | Msa0935470:CDS | 50.0% | |
| ! | TGCACTTTGAAGGAGGCTAG+AGG | + | chr6_3:6074950-6074969 | Msa0935470:intron | 50.0% |
| GTGATTGATCGTCACCATCC+AGG | + | chr6_3:6075062-6075081 | Msa0935470:CDS | 50.0% | |
| GTGTGTCGAAAACGGTGTGT+TGG | + | chr6_3:6075340-6075359 | Msa0935470:three_prime_UTR | 50.0% | |
| GTGGAACCTTGAACAAGGAG+AGG | - | chr6_3:6075604-6075623 | None:intergenic | 50.0% | |
| GTTGAAGCCAGACCCTATGG+TGG | + | chr6_3:6071455-6071474 | Msa0935470:CDS | 55.0% | |
| CAGGTGGCCTAATCTTGGAG+AGG | - | chr6_3:6072275-6072294 | None:intergenic | 55.0% | |
| AATTGTGGGTGGCCCGATAG+CGG | - | chr6_3:6072309-6072328 | None:intergenic | 55.0% | |
| !! | GCCTAATAGTGCTGGTCGTG+AGG | + | chr6_3:6072345-6072364 | Msa0935470:intron | 55.0% |
| CCCTCACGACCAGCACTATT+AGG | - | chr6_3:6072349-6072368 | None:intergenic | 55.0% | |
| TCGCAGGCATGCGTGGAAAT+TGG | + | chr6_3:6073312-6073331 | Msa0935470:CDS | 55.0% | |
| GTCGGTGACGCTATCTTTGG+TGG | + | chr6_3:6073716-6073735 | Msa0935470:CDS | 55.0% | |
| GAAGGAGGCTAGAGGCTGAT+AGG | + | chr6_3:6074958-6074977 | Msa0935470:intron | 55.0% | |
| GTGGCTACCACCATAGGGTC+TGG | - | chr6_3:6071465-6071484 | None:intergenic | 60.0% | |
| ACTTTGCTCGCAGGCATGCG+TGG | + | chr6_3:6073305-6073324 | Msa0935470:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 6070747 | 6075738 | 6070747 | ID=Msa0935470;Name=Msa0935470 |
| chr6_3 | mRNA | 6070747 | 6075738 | 6070747 | ID=Msa0935470-mRNA-1;Parent=Msa0935470;Name=Msa0935470-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.90|0.91|1|0.81|0.75|12|467|629 |
| chr6_3 | exon | 6070747 | 6070827 | 6070747 | ID=Msa0935470-mRNA-1:exon:1836;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6070981 | 6071244 | 6070981 | ID=Msa0935470-mRNA-1:exon:1837;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6071453 | 6071602 | 6071453 | ID=Msa0935470-mRNA-1:exon:1838;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6071782 | 6071915 | 6071782 | ID=Msa0935470-mRNA-1:exon:1839;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6072649 | 6072862 | 6072649 | ID=Msa0935470-mRNA-1:exon:1840;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6073188 | 6073333 | 6073188 | ID=Msa0935470-mRNA-1:exon:1841;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6073673 | 6073900 | 6073673 | ID=Msa0935470-mRNA-1:exon:1842;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6074075 | 6074277 | 6074075 | ID=Msa0935470-mRNA-1:exon:1843;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6074381 | 6074624 | 6074381 | ID=Msa0935470-mRNA-1:exon:1844;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6074962 | 6075393 | 6074962 | ID=Msa0935470-mRNA-1:exon:1845;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6075433 | 6075521 | 6075433 | ID=Msa0935470-mRNA-1:exon:1846;Parent=Msa0935470-mRNA-1 |
| chr6_3 | exon | 6075567 | 6075738 | 6075567 | ID=Msa0935470-mRNA-1:exon:1847;Parent=Msa0935470-mRNA-1 |
| chr6_3 | CDS | 6070747 | 6070827 | 6070747 | ID=Msa0935470-mRNA-1:cds;Parent=Msa0935470-mRNA-1 |
| chr6_3 | CDS | 6070981 | 6071244 | 6070981 | ID=Msa0935470-mRNA-1:cds;Parent=Msa0935470-mRNA-1 |
| chr6_3 | CDS | 6071453 | 6071602 | 6071453 | ID=Msa0935470-mRNA-1:cds;Parent=Msa0935470-mRNA-1 |
| chr6_3 | CDS | 6071782 | 6071915 | 6071782 | ID=Msa0935470-mRNA-1:cds;Parent=Msa0935470-mRNA-1 |
| chr6_3 | CDS | 6072649 | 6072862 | 6072649 | ID=Msa0935470-mRNA-1:cds;Parent=Msa0935470-mRNA-1 |
| chr6_3 | CDS | 6073188 | 6073333 | 6073188 | ID=Msa0935470-mRNA-1:cds;Parent=Msa0935470-mRNA-1 |
| chr6_3 | CDS | 6073673 | 6073900 | 6073673 | ID=Msa0935470-mRNA-1:cds;Parent=Msa0935470-mRNA-1 |
| chr6_3 | CDS | 6074075 | 6074277 | 6074075 | ID=Msa0935470-mRNA-1:cds;Parent=Msa0935470-mRNA-1 |
| chr6_3 | CDS | 6074381 | 6074624 | 6074381 | ID=Msa0935470-mRNA-1:cds;Parent=Msa0935470-mRNA-1 |
| chr6_3 | CDS | 6074962 | 6075187 | 6074962 | ID=Msa0935470-mRNA-1:cds;Parent=Msa0935470-mRNA-1 |
| chr6_3 | three_prime_UTR | 6075188 | 6075393 | 6075188 | ID=Msa0935470-mRNA-1:three_prime_utr;Parent=Msa0935470-mRNA-1 |
| chr6_3 | three_prime_UTR | 6075433 | 6075521 | 6075433 | ID=Msa0935470-mRNA-1:three_prime_utr;Parent=Msa0935470-mRNA-1 |
| chr6_3 | three_prime_UTR | 6075567 | 6075738 | 6075567 | ID=Msa0935470-mRNA-1:three_prime_utr;Parent=Msa0935470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
