Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903070 | KEH24897.1 | 93.641 | 629 | 32 | 1 | 1 | 629 | 1 | 621 | 0.0 | 1222 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903070 | sp|Q5GQ66|PIOX_PEA | 83.056 | 602 | 102 | 0 | 28 | 629 | 42 | 643 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0903070 | 0.804199 | 2.422398e-49 | -8.615850e-47 |
| Msa0003700 | Msa0903070 | 0.801163 | 1.025119e-48 | -8.615850e-47 |
| Msa0005890 | Msa0903070 | 0.833797 | 4.338023e-56 | -8.615850e-47 |
| Msa0018000 | Msa0903070 | 0.801468 | 8.878608e-49 | -8.615850e-47 |
| Msa0028420 | Msa0903070 | 0.827944 | 1.182827e-54 | -8.615850e-47 |
| Msa0035120 | Msa0903070 | 0.804764 | 1.847456e-49 | -8.615850e-47 |
| Msa0042610 | Msa0903070 | 0.801159 | 1.026773e-48 | -8.615850e-47 |
| Msa0043620 | Msa0903070 | 0.811811 | 5.809582e-51 | -8.615850e-47 |
| Msa0075220 | Msa0903070 | 0.804038 | 2.616386e-49 | -8.615850e-47 |
| Msa0081520 | Msa0903070 | 0.816581 | 5.135640e-52 | -8.615850e-47 |
| Msa0090400 | Msa0903070 | 0.803977 | 2.693826e-49 | -8.615850e-47 |
| Msa0091600 | Msa0903070 | 0.802101 | 6.581126e-49 | -8.615850e-47 |
| Msa0092790 | Msa0903070 | 0.819417 | 1.174340e-52 | -8.615850e-47 |
| Msa0094130 | Msa0903070 | 0.809935 | 1.479226e-50 | -8.615850e-47 |
| Msa0094780 | Msa0903070 | 0.801618 | 8.271799e-49 | -8.615850e-47 |
| Msa0614000 | Msa0903070 | 0.800460 | 1.426085e-48 | -8.615850e-47 |
| Msa0624900 | Msa0903070 | 0.813733 | 2.203760e-51 | -8.615850e-47 |
| Msa0626450 | Msa0903070 | 0.813038 | 3.132939e-51 | -8.615850e-47 |
| Msa0626490 | Msa0903070 | 0.809997 | 1.435031e-50 | -8.615850e-47 |
| Msa0638480 | Msa0903070 | 0.804618 | 1.981293e-49 | -8.615850e-47 |
| Msa0657180 | Msa0903070 | 0.851042 | 1.148059e-60 | -8.615850e-47 |
| Msa0663270 | Msa0903070 | 0.803504 | 3.378512e-49 | -8.615850e-47 |
| Msa0664090 | Msa0903070 | 0.816628 | 5.014911e-52 | -8.615850e-47 |
| Msa0664150 | Msa0903070 | 0.826907 | 2.096631e-54 | -8.615850e-47 |
| Msa0664600 | Msa0903070 | 0.814699 | 1.348670e-51 | -8.615850e-47 |
| Msa0677410 | Msa0903070 | 0.819418 | 1.173554e-52 | -8.615850e-47 |
| Msa0683570 | Msa0903070 | 0.803108 | 4.080626e-49 | -8.615850e-47 |
| Msa0701220 | Msa0903070 | 0.856972 | 2.240353e-62 | -8.615850e-47 |
| Msa0765240 | Msa0903070 | 0.805181 | 1.510892e-49 | -8.615850e-47 |
| Msa0768990 | Msa0903070 | 0.817854 | 2.656451e-52 | -8.615850e-47 |
| Msa0780270 | Msa0903070 | 0.811275 | 7.594311e-51 | -8.615850e-47 |
| Msa0795870 | Msa0903070 | 0.819667 | 1.029513e-52 | -8.615850e-47 |
| Msa0833650 | Msa0903070 | 0.816020 | 6.858985e-52 | -8.615850e-47 |
| Msa0835960 | Msa0903070 | 0.823516 | 1.327834e-53 | -8.615850e-47 |
| Msa0124060 | Msa0903070 | 0.804577 | 2.020934e-49 | -8.615850e-47 |
| Msa0137880 | Msa0903070 | 0.809937 | 1.478292e-50 | -8.615850e-47 |
| Msa0152400 | Msa0903070 | 0.800218 | 1.597616e-48 | -8.615850e-47 |
| Msa0167520 | Msa0903070 | 0.805739 | 1.154177e-49 | -8.615850e-47 |
| Msa0168500 | Msa0903070 | 0.808941 | 2.417571e-50 | -8.615850e-47 |
| Msa0182190 | Msa0903070 | 0.830229 | 3.302494e-55 | -8.615850e-47 |
| Msa0182240 | Msa0903070 | 0.832839 | 7.516980e-56 | -8.615850e-47 |
| Msa0197420 | Msa0903070 | 0.823777 | 1.153966e-53 | -8.615850e-47 |
| Msa0223210 | Msa0903070 | 0.810489 | 1.123660e-50 | -8.615850e-47 |
| Msa0225100 | Msa0903070 | 0.808089 | 3.676390e-50 | -8.615850e-47 |
| Msa0225460 | Msa0903070 | 0.818127 | 2.305282e-52 | -8.615850e-47 |
| Msa0225680 | Msa0903070 | 0.815316 | 9.840084e-52 | -8.615850e-47 |
| Msa0225860 | Msa0903070 | 0.827290 | 1.697353e-54 | -8.615850e-47 |
| Msa0378720 | Msa0903070 | 0.802447 | 5.585731e-49 | -8.615850e-47 |
| Msa0405710 | Msa0903070 | 0.806988 | 6.294343e-50 | -8.615850e-47 |
| Msa0430750 | Msa0903070 | 0.816124 | 6.499558e-52 | -8.615850e-47 |
| Msa0440500 | Msa0903070 | 0.812387 | 4.349205e-51 | -8.615850e-47 |
| Msa0443310 | Msa0903070 | 0.818818 | 1.607012e-52 | -8.615850e-47 |
| Msa0475790 | Msa0903070 | 0.816863 | 4.440032e-52 | -8.615850e-47 |
| Msa0476650 | Msa0903070 | 0.824843 | 6.478253e-54 | -8.615850e-47 |
| Msa0239190 | Msa0903070 | 0.827752 | 1.315199e-54 | -8.615850e-47 |
| Msa0255090 | Msa0903070 | 0.815069 | 1.116583e-51 | -8.615850e-47 |
| Msa0259380 | Msa0903070 | 0.805787 | 1.127640e-49 | -8.615850e-47 |
| Msa0264400 | Msa0903070 | 0.803311 | 3.703544e-49 | -8.615850e-47 |
| Msa0265850 | Msa0903070 | 0.800292 | 1.543216e-48 | -8.615850e-47 |
| Msa0266180 | Msa0903070 | 0.810912 | 9.105277e-51 | -8.615850e-47 |
| Msa0267110 | Msa0903070 | 0.837806 | 4.182072e-57 | -8.615850e-47 |
| Msa0277180 | Msa0903070 | 0.819052 | 1.422072e-52 | -8.615850e-47 |
| Msa0287740 | Msa0903070 | 0.806268 | 8.934001e-50 | -8.615850e-47 |
| Msa0298470 | Msa0903070 | 0.818807 | 1.616722e-52 | -8.615850e-47 |
| Msa0300690 | Msa0903070 | 0.809822 | 1.565083e-50 | -8.615850e-47 |
| Msa0316810 | Msa0903070 | 0.834752 | 2.499555e-56 | -8.615850e-47 |
| Msa0318700 | Msa0903070 | 0.801534 | 8.606274e-49 | -8.615850e-47 |
| Msa0330380 | Msa0903070 | 0.802321 | 5.929979e-49 | -8.615850e-47 |
| Msa0339500 | Msa0903070 | 0.800054 | 1.725542e-48 | -8.615850e-47 |
| Msa0339650 | Msa0903070 | 0.812426 | 4.266106e-51 | -8.615850e-47 |
| Msa0348880 | Msa0903070 | 0.828258 | 9.937091e-55 | -8.615850e-47 |
| Msa0483100 | Msa0903070 | 0.801243 | 9.872932e-49 | -8.615850e-47 |
| Msa0527820 | Msa0903070 | 0.800655 | 1.301559e-48 | -8.615850e-47 |
| Msa0565000 | Msa0903070 | 0.842475 | 2.527754e-58 | -8.615850e-47 |
| Msa0580370 | Msa0903070 | 0.820280 | 7.454532e-53 | -8.615850e-47 |
| Msa0582480 | Msa0903070 | 0.807471 | 4.973158e-50 | -8.615850e-47 |
| Msa0586220 | Msa0903070 | 0.807855 | 4.122693e-50 | -8.615850e-47 |
| Msa0597790 | Msa0903070 | 0.805812 | 1.114030e-49 | -8.615850e-47 |
| Msa0844570 | Msa0903070 | 0.809180 | 2.149748e-50 | -8.615850e-47 |
| Msa0861510 | Msa0903070 | 0.821306 | 4.330823e-53 | -8.615850e-47 |
| Msa0861600 | Msa0903070 | 0.821265 | 4.425667e-53 | -8.615850e-47 |
| Msa0868440 | Msa0903070 | 0.812776 | 3.576746e-51 | -8.615850e-47 |
| Msa0869680 | Msa0903070 | 0.886305 | 3.839489e-72 | -8.615850e-47 |
| Msa0871880 | Msa0903070 | 0.802165 | 6.384546e-49 | -8.615850e-47 |
| Msa0876190 | Msa0903070 | 0.833156 | 6.271339e-56 | -8.615850e-47 |
| Msa0896540 | Msa0903070 | 0.803975 | 2.696825e-49 | -8.615850e-47 |
| Msa0903070 | Msa0935470 | 0.931557 | 3.165924e-94 | -8.615850e-47 |
| Msa0903070 | Msa0945110 | 0.828559 | 8.404017e-55 | -8.615850e-47 |
| Msa0903070 | Msa0948290 | 0.822532 | 2.252392e-53 | -8.615850e-47 |
| Msa0903070 | Msa0961690 | 0.800487 | 1.408390e-48 | -8.615850e-47 |
| Msa0903070 | Msa0967380 | 0.812902 | 3.356304e-51 | -8.615850e-47 |
| Msa0903070 | Msa0967870 | 0.801542 | 8.571425e-49 | -8.615850e-47 |
| Msa0903070 | Msa0969200 | 0.939096 | 2.253843e-99 | -8.615850e-47 |
| Msa0903070 | Msa1005870 | 0.803101 | 4.093992e-49 | -8.615850e-47 |
| Msa0903070 | Msa1019000 | 0.817839 | 2.678081e-52 | -8.615850e-47 |
| Msa0903070 | Msa1019150 | 0.830911 | 2.249290e-55 | -8.615850e-47 |
| Msa0903070 | Msa1019430 | 0.811763 | 5.950493e-51 | -8.615850e-47 |
| Msa0903070 | Msa1019470 | 0.820393 | 7.024754e-53 | -8.615850e-47 |
| Msa0903070 | Msa1026480 | 0.801923 | 7.161907e-49 | -8.615850e-47 |
| Msa0903070 | Msa1041670 | 0.808190 | 3.497436e-50 | -8.615850e-47 |
| Msa0903070 | Msa1044470 | 0.820373 | 7.097356e-53 | -8.615850e-47 |
| Msa0903070 | Msa1092010 | 0.800472 | 1.418502e-48 | -8.615850e-47 |
| Msa0903070 | Msa1103990 | 0.818956 | 1.495134e-52 | -8.615850e-47 |
| Msa0903070 | Msa1132840 | 0.822292 | 2.561038e-53 | -8.615850e-47 |
| Msa0903070 | Msa1135470 | 0.805536 | 1.272951e-49 | -8.615850e-47 |
| Msa0903070 | Msa1145810 | 0.802362 | 5.815194e-49 | -8.615850e-47 |
| Msa0903070 | Msa1147740 | 0.828534 | 8.524031e-55 | -8.615850e-47 |
| Msa0903070 | Msa1157870 | 0.850987 | 1.189915e-60 | -8.615850e-47 |
| Msa0903070 | Msa1166560 | 0.808352 | 3.230296e-50 | -8.615850e-47 |
| Msa0903070 | Msa1174230 | 0.857286 | 1.809948e-62 | -8.615850e-47 |
| Msa0903070 | Msa1190920 | 0.832462 | 9.321909e-56 | -8.615850e-47 |
| Msa0903070 | Msa1193290 | 0.804745 | 1.863936e-49 | -8.615850e-47 |
| Msa0903070 | Msa1199570 | 0.816753 | 4.701230e-52 | -8.615850e-47 |
| Msa0903070 | Msa1200420 | 0.814169 | 1.766477e-51 | -8.615850e-47 |
| Msa0903070 | Msa1213250 | 0.803596 | 3.233014e-49 | -8.615850e-47 |
| Msa0903070 | Msa1217210 | 0.806016 | 1.009309e-49 | -8.615850e-47 |
| Msa0903070 | Msa1224930 | 0.830902 | 2.260578e-55 | -8.615850e-47 |
| Msa0903070 | Msa1231820 | 0.819055 | 1.420074e-52 | -8.615850e-47 |
| Msa0903070 | Msa1267770 | 0.801795 | 7.606900e-49 | -8.615850e-47 |
| Msa0903070 | Msa1267900 | 0.860936 | 1.458399e-63 | -8.615850e-47 |
| Msa0903070 | Msa1269480 | 0.819795 | 9.624554e-53 | -8.615850e-47 |
| Msa0903070 | Msa1274520 | 0.813285 | 2.765052e-51 | -8.615850e-47 |
| Msa0903070 | Msa1277150 | 0.802126 | 6.502831e-49 | -8.615850e-47 |
| Msa0903070 | Msa1285550 | 0.825347 | 4.925298e-54 | -8.615850e-47 |
| Msa0903070 | Msa1320670 | 0.807697 | 4.453314e-50 | -8.615850e-47 |
| Msa0903070 | Msa1328640 | 0.801615 | 8.281095e-49 | -8.615850e-47 |
| Msa0903070 | Msa1328710 | 0.817372 | 3.411981e-52 | -8.615850e-47 |
| Msa0903070 | Msa1333480 | 0.800711 | 1.267802e-48 | -8.615850e-47 |
| Msa0903070 | Msa1353470 | 0.805768 | 1.138064e-49 | -8.615850e-47 |
| Msa0903070 | Msa1369150 | 0.814939 | 1.193405e-51 | -8.615850e-47 |
| Msa0903070 | Msa1396030 | 0.813664 | 2.282502e-51 | -8.615850e-47 |
| Msa0903070 | Msa1402400 | 0.810977 | 8.813737e-51 | -8.615850e-47 |
| Msa0903070 | Msa1422420 | 0.816824 | 4.531045e-52 | -8.615850e-47 |
| Msa0903070 | Msa1427200 | 0.833834 | 4.247586e-56 | -8.615850e-47 |
| Msa0903070 | Msa1440880 | 0.814443 | 1.536501e-51 | -8.615850e-47 |
| Msa0903070 | Msa1446810 | 0.802684 | 4.992822e-49 | -8.615850e-47 |
| Msa0903070 | Msa1451160 | 0.805234 | 1.472789e-49 | -8.615850e-47 |
| Msa0903070 | Msa1466920 | 0.813194 | 2.895074e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903070 | MtrunA17_Chr6g0451291 | 92.687 | 629 | 32 | 1 | 1 | 629 | 1 | 615 | 0.0 | 1206 |
| Msa0903070 | MtrunA17_Chr6g0451281 | 81.511 | 622 | 109 | 3 | 10 | 629 | 25 | 642 | 0.0 | 1070 |
| Msa0903070 | MtrunA17_Chr6g0451261 | 79.378 | 611 | 123 | 2 | 22 | 629 | 304 | 914 | 0.0 | 1023 |
| Msa0903070 | MtrunA17_Chr8g0392711 | 62.787 | 610 | 212 | 3 | 20 | 626 | 24 | 621 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903070 | AT3G01420.1 | 74.627 | 603 | 152 | 1 | 28 | 629 | 37 | 639 | 0.0 | 947 |
| Msa0903070 | AT1G73680.1 | 63.520 | 625 | 225 | 3 | 2 | 626 | 7 | 628 | 0.0 | 814 |
| Msa0903070 | AT1G73680.2 | 62.303 | 634 | 227 | 5 | 2 | 626 | 7 | 637 | 0.0 | 800 |
| Msa0903070 | AT1G73680.3 | 66.216 | 518 | 174 | 1 | 109 | 626 | 3 | 519 | 0.0 | 714 |
| Msa0903070 | AT1G73680.4 | 66.947 | 475 | 156 | 1 | 152 | 626 | 1 | 474 | 0.0 | 665 |
Find 172 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTACTCCATCTTCATTT+TGG | 0.160377 | 6_2:-185748 | None:intergenic |
| TTTATTTAGGTATGGATTAT+TGG | 0.165781 | 6_2:+186664 | Msa0903070:intron |
| CATTGTGTTCTTGAATAAAA+AGG | 0.172248 | 6_2:-185820 | None:intergenic |
| TCTCTTGGGCCTATTGTATT+TGG | 0.181493 | 6_2:+184049 | Msa0903070:CDS |
| CTTCAAGTGCTTTCTCTGTT+TGG | 0.185040 | 6_2:+188108 | Msa0903070:CDS |
| TATTGATACCTATTTCAAAA+TGG | 0.218562 | 6_2:+187438 | Msa0903070:CDS |
| GGAATTGGATTGTCTTTGTT+TGG | 0.229305 | 6_2:-188140 | None:intergenic |
| TGCAAGAGCATTAGTGTCTA+TGG | 0.246157 | 6_2:+187135 | Msa0903070:CDS |
| GAATTGGATTGTCTTTGTTT+GGG | 0.253532 | 6_2:-188139 | None:intergenic |
| GTTCTATATGGATAATCATT+AGG | 0.263833 | 6_2:-184146 | None:intergenic |
| TTATTTAGGTATGGATTATT+GGG | 0.264621 | 6_2:+186665 | Msa0903070:intron |
| ATAGAAAGTACTGAAATAAA+AGG | 0.270774 | 6_2:-188657 | None:intergenic |
| TTCAAGTGCTTTCTCTGTTT+GGG | 0.278891 | 6_2:+188109 | Msa0903070:CDS |
| AAAGTATTGGAAGAGGTATA+TGG | 0.283665 | 6_2:+187491 | Msa0903070:CDS |
| TACTTTCTATTTCCATGAAA+TGG | 0.287774 | 6_2:+188670 | Msa0903070:three_prime_UTR |
| AATTCTTCAGTTAGAGAGTA+TGG | 0.287850 | 6_2:-186776 | None:intergenic |
| GAAGATGGAGTAGCAATTTC+AGG | 0.292686 | 6_2:+185755 | Msa0903070:CDS |
| TACAAATGAGGTCGAGCTTA+TGG | 0.299281 | 6_2:-188729 | None:intergenic |
| TCGCAGGCATGCGTGGAAAT+TGG | 0.299707 | 6_2:+186312 | Msa0903070:CDS |
| TGAGGAGACATACACCAAAA+AGG | 0.300584 | 6_2:+188001 | Msa0903070:CDS |
| TCTTCTAAATTGATTATATC+TGG | 0.301658 | 6_2:-187408 | None:intergenic |
| TTGCATCCTCTCCTTGTTCA+AGG | 0.303129 | 6_2:+188595 | Msa0903070:three_prime_UTR |
| GCACCGTTTACCTGTTCTCT+TGG | 0.305249 | 6_2:+184034 | Msa0903070:CDS |
| TATGGAACACCATGATTATC+TGG | 0.307899 | 6_2:-186758 | None:intergenic |
| ATATAAATGGTGCAGTTTAT+AGG | 0.314355 | 6_2:+187366 | Msa0903070:intron |
| TTTCCATCAGCAGTTCTATA+TGG | 0.317935 | 6_2:-184158 | None:intergenic |
| AACCACTTCTCTGTCATTCC+TGG | 0.318503 | 6_2:-188080 | None:intergenic |
| AAGAAATTCAAGGACACGTT+TGG | 0.321740 | 6_2:+186689 | Msa0903070:CDS |
| ATGGATAGTTTCCAAGTGTT+AGG | 0.324477 | 6_2:-187177 | None:intergenic |
| TATAAATGGTGCAGTTTATA+GGG | 0.329414 | 6_2:+187367 | Msa0903070:intron |
| CATCTATGTTCTGTGGTACT+AGG | 0.336758 | 6_2:-187213 | None:intergenic |
| TAATTAGTTGAAATTTAAAT+AGG | 0.340257 | 6_2:-188311 | None:intergenic |
| GGTGGTGGCCACAAAACTTT+TGG | 0.347715 | 6_2:+184494 | Msa0903070:CDS |
| AGAAACTAGATTTACTAGTA+TGG | 0.348818 | 6_2:-188701 | None:intergenic |
| ATACGAAGATAAAGTGGAAT+TGG | 0.356112 | 6_2:-188155 | None:intergenic |
| GACAAACAGCTGTAGGAGTT+AGG | 0.366038 | 6_2:+184117 | Msa0903070:CDS |
| GAACACAACTGAGAGCTTAA+AGG | 0.370793 | 6_2:+188037 | Msa0903070:CDS |
| TTCTATATGGATAATCATTA+GGG | 0.374278 | 6_2:-184145 | None:intergenic |
| TCTTTACCGTTATGCTAGAT+TGG | 0.374775 | 6_2:+186217 | Msa0903070:CDS |
| TCTATGGGTCATCAAACTTC+TGG | 0.375181 | 6_2:+187151 | Msa0903070:CDS |
| CAGGTGATGTTCGTAATAGT+TGG | 0.375562 | 6_2:+185774 | Msa0903070:CDS |
| CCATTGACAAGCTTGGAATA+TGG | 0.378143 | 6_2:+184012 | Msa0903070:CDS |
| TTGGCATACTCTTTGATTAG+TGG | 0.381268 | 6_2:-186887 | None:intergenic |
| ATGGAATCATATCCATTTCA+TGG | 0.381448 | 6_2:-188682 | None:intergenic |
| AGGGATGGAAGTGTGATATA+TGG | 0.381936 | 6_2:+185647 | Msa0903070:intron |
| TTCAATTTATGATACATGAT+TGG | 0.382105 | 6_2:+184574 | Msa0903070:CDS |
| TCTCTCAAATGCAGAGAATC+AGG | 0.385455 | 6_2:-186830 | None:intergenic |
| TTAGTTTAATTCATTACTAT+AGG | 0.392254 | 6_2:-188467 | None:intergenic |
| GAAGGAGGCTAGAGGCTGAT+AGG | 0.395767 | 6_2:+187958 | Msa0903070:intron |
| CAAGAATAACCAATGATTAG+AGG | 0.397685 | 6_2:+188560 | Msa0903070:intron |
| ACATGATTGGATAGACCATT+TGG | 0.400463 | 6_2:+184587 | Msa0903070:CDS |
| GTGGCCACCACCATAGGGTC+TGG | 0.404951 | 6_2:-184483 | None:intergenic |
| CAAAGATTCACACTATAGAT+TGG | 0.406140 | 6_2:+186258 | Msa0903070:CDS |
| TAAATATTGTTTGTCGAAAA+CGG | 0.406356 | 6_2:+188332 | Msa0903070:three_prime_UTR |
| GGAAGTCAAGGGTCTTTCAT+TGG | 0.407694 | 6_2:+184209 | Msa0903070:CDS |
| CACCGTTTACCTGTTCTCTT+GGG | 0.408694 | 6_2:+184035 | Msa0903070:CDS |
| AAGAATTTGTCAGTGTCTAT+AGG | 0.411562 | 6_2:+186792 | Msa0903070:CDS |
| CGCTATCTTTGGTGGATTGG+TGG | 0.411596 | 6_2:+186724 | Msa0903070:CDS |
| CTTAGTCAAGTTAATTAACT+AGG | 0.412886 | 6_2:-188179 | None:intergenic |
| CATGTCGGTGACGCTATCTT+TGG | 0.414452 | 6_2:+186713 | Msa0903070:CDS |
| ATTGATACCTATTTCAAAAT+GGG | 0.422128 | 6_2:+187439 | Msa0903070:CDS |
| CATGGCAGAGAAGAAGATAA+AGG | 0.425013 | 6_2:+187550 | Msa0903070:CDS |
| AGAAATTCAAGGACACGTTT+GGG | 0.428428 | 6_2:+186690 | Msa0903070:CDS |
| AGGTGATGTTCGTAATAGTT+GGG | 0.441309 | 6_2:+185775 | Msa0903070:CDS |
| CGTTGAAGAGGTTGTATTGT+TGG | 0.442142 | 6_2:-184091 | None:intergenic |
| AGATCTTCATCTTCCAAGTC+CGG | 0.445170 | 6_2:-186197 | None:intergenic |
| TACAATAGGCCCAAGAGAAC+AGG | 0.445679 | 6_2:-184044 | None:intergenic |
| GTCGGTGACGCTATCTTTGG+TGG | 0.446058 | 6_2:+186716 | Msa0903070:CDS |
| CCATTTGGAGGACACTAATC+AGG | 0.454160 | 6_2:+184602 | Msa0903070:CDS |
| TAAGAAAGTAATCAAAGTAT+TGG | 0.454515 | 6_2:+187478 | Msa0903070:CDS |
| TTAGAAAGAATACCCGGACT+TGG | 0.458388 | 6_2:+186184 | Msa0903070:intron |
| ATTCCTATGAATGATCTGAT+TGG | 0.459502 | 6_2:+187076 | Msa0903070:CDS |
| TGACGCTATCTTTGGTGGAT+TGG | 0.460332 | 6_2:+186721 | Msa0903070:CDS |
| TTCCAGCACTTTCATTGAAA+GGG | 0.464817 | 6_2:-184190 | None:intergenic |
| ATTCACTCCATTGACAAGCT+TGG | 0.465544 | 6_2:+184005 | Msa0903070:CDS |
| CTCATCAACCCTCTAATCAT+TGG | 0.467060 | 6_2:-188569 | None:intergenic |
| CTTCCAGCACTTTCATTGAA+AGG | 0.467301 | 6_2:-184191 | None:intergenic |
| GGTTGTATTGTTGGTGAAGA+TGG | 0.472509 | 6_2:-184082 | None:intergenic |
| GTCTAATGGCCAAATACAAT+AGG | 0.476494 | 6_2:-184058 | None:intergenic |
| GACCCTTTCAATGAAAGTGC+TGG | 0.479861 | 6_2:+184188 | Msa0903070:CDS |
| TAGAAAGTACTGAAATAAAA+GGG | 0.480241 | 6_2:-188656 | None:intergenic |
| AAGTATTGGAAGAGGTATAT+GGG | 0.482688 | 6_2:+187492 | Msa0903070:CDS |
| CTAGTACCACAGAACATAGA+TGG | 0.488409 | 6_2:+187214 | Msa0903070:CDS |
| GAGGAGCTTGATACACTAGT+AGG | 0.488654 | 6_2:+187524 | Msa0903070:CDS |
| AGTCCAATCAGATCATTCAT+AGG | 0.489257 | 6_2:-187079 | None:intergenic |
| TATTCCTTGTCATGGCATCT+AGG | 0.490057 | 6_2:+187603 | Msa0903070:CDS |
| CCATATTCCAAGCTTGTCAA+TGG | 0.491674 | 6_2:-184012 | None:intergenic |
| TGGATAGTTTCCAAGTGTTA+GGG | 0.492607 | 6_2:-187176 | None:intergenic |
| ACTTCTGGTGCCCTAACACT+TGG | 0.493264 | 6_2:+187166 | Msa0903070:CDS |
| ATGGCAGAGAAGAAGATAAA+GGG | 0.494420 | 6_2:+187551 | Msa0903070:CDS |
| ACTAGGTTTCTGAGAAATGA+TGG | 0.495166 | 6_2:-187196 | None:intergenic |
| AATTGGATTGTCTTTGTTTG+GGG | 0.496370 | 6_2:-188138 | None:intergenic |
| ACCTTGTCCTTCTGATCCAC+AGG | 0.498358 | 6_2:-184245 | None:intergenic |
| ACCCTTATCCAAAATGAAGA+TGG | 0.500959 | 6_2:+185740 | Msa0903070:CDS |
| TCAATGTGTTAGCAGCTGCT+TGG | 0.503391 | 6_2:+184550 | Msa0903070:CDS |
| TATAGTAATGAATTAAACTA+AGG | 0.503917 | 6_2:+188469 | Msa0903070:three_prime_UTR |
| GGCCCAAGAGAACAGGTAAA+CGG | 0.506089 | 6_2:-184037 | None:intergenic |
| TGAATTGTTTCCCATTGCCC+TGG | 0.506808 | 6_2:-184530 | None:intergenic |
| CTGTTTGTCCAACGTTGAAG+AGG | 0.509107 | 6_2:-184103 | None:intergenic |
| AATGAAAGTGCTGGAAGTCA+AGG | 0.509134 | 6_2:+184197 | Msa0903070:CDS |
| CCTGATTAGTGTCCTCCAAA+TGG | 0.509333 | 6_2:-184602 | None:intergenic |
| ACAAACAGCTGTAGGAGTTA+GGG | 0.512018 | 6_2:+184118 | Msa0903070:CDS |
| CTAGGAATACGAAGATAAAG+TGG | 0.513359 | 6_2:-188161 | None:intergenic |
| ATTATTGGGGAAGAAATTCA+AGG | 0.514441 | 6_2:+186679 | Msa0903070:CDS |
| GTTGTTGAAGCCAGACCCTA+TGG | 0.516727 | 6_2:+184473 | Msa0903070:intron |
| GCATACTCTTTGATTAGTGG+TGG | 0.519980 | 6_2:-186884 | None:intergenic |
| GTGATTGATCGTCACCATCC+AGG | 0.520313 | 6_2:+188062 | Msa0903070:CDS |
| AAGACAAAGGAAATTCCAAC+GGG | 0.522014 | 6_2:+184847 | Msa0903070:CDS |
| AGTAATCAAAGTATTGGAAG+AGG | 0.523415 | 6_2:+187484 | Msa0903070:CDS |
| GATCTTCATCTTCCAAGTCC+GGG | 0.528153 | 6_2:-186196 | None:intergenic |
| GCAAGAGCATTAGTGTCTAT+GGG | 0.528313 | 6_2:+187136 | Msa0903070:CDS |
| ATGAATAAACCAGATAATCA+TGG | 0.529809 | 6_2:+186749 | Msa0903070:CDS |
| AAACACAAAGGAAGAAGATA+AGG | 0.532191 | 6_2:-188623 | None:intergenic |
| AAAACTGACACTTTGCTCGC+AGG | 0.535390 | 6_2:+186296 | Msa0903070:CDS |
| AATGCAGACTCTTTAACTTG+AGG | 0.536382 | 6_2:+188235 | Msa0903070:three_prime_UTR |
| TATCCATATAGAACTGCTGA+TGG | 0.540566 | 6_2:+184155 | Msa0903070:CDS |
| AGTGTGAGGACATTCAAAGA+TGG | 0.548437 | 6_2:+185692 | Msa0903070:CDS |
| TATTCTTCCTGTGGATCAGA+AGG | 0.548821 | 6_2:+184238 | Msa0903070:CDS |
| CAATACAACCTCTTCAACGT+TGG | 0.548944 | 6_2:+184095 | Msa0903070:CDS |
| TTGGTGAAGATGGCGTCTAA+TGG | 0.550915 | 6_2:-184072 | None:intergenic |
| GGTTTCTATGAGATCAAGAC+TGG | 0.556307 | 6_2:+184868 | Msa0903070:CDS |
| CAGTTTATAGGGATAGAGAG+AGG | 0.556436 | 6_2:+187378 | Msa0903070:intron |
| GCTATCTTTGGTGGATTGGT+GGG | 0.556873 | 6_2:+186725 | Msa0903070:CDS |
| GGTATATGGGAATGATGTTG+AGG | 0.562423 | 6_2:+187505 | Msa0903070:CDS |
| AATGATCTGATTGGACTACC+AGG | 0.562984 | 6_2:+187085 | Msa0903070:CDS |
| AAGAATAACCAATGATTAGA+GGG | 0.564207 | 6_2:+188561 | Msa0903070:intron |
| GTGTGAGGACATTCAAAGAT+GGG | 0.566520 | 6_2:+185693 | Msa0903070:CDS |
| AGAGATATATCTGCCACCCC+AGG | 0.569935 | 6_2:+186848 | Msa0903070:CDS |
| ATTCAAGTTCTTGAAGACAA+AGG | 0.574896 | 6_2:+184834 | Msa0903070:CDS |
| ATTCTTACCACCAAGGTGTA+CGG | 0.577040 | 6_2:-184903 | None:intergenic |
| TGATTGGATAGACCATTTGG+AGG | 0.577305 | 6_2:+184590 | Msa0903070:CDS |
| TGGAAGAAATATTCTTCCTG+TGG | 0.579019 | 6_2:+184229 | Msa0903070:CDS |
| GATGTTCGTAATAGTTGGGC+TGG | 0.581972 | 6_2:+185779 | Msa0903070:CDS |
| TGCTGTTTGTGATACTCTCA+AGG | 0.583075 | 6_2:+185841 | Msa0903070:CDS |
| TTGATCTCATAGAAACCCGT+TGG | 0.589718 | 6_2:-184862 | None:intergenic |
| TGCAAATCCTATCGAGGACA+AGG | 0.593780 | 6_2:-187116 | None:intergenic |
| TCTGTGCCATCTATGTTCTG+TGG | 0.595744 | 6_2:-187220 | None:intergenic |
| CATTGGCTTGCAACTTCACG+TGG | 0.599180 | 6_2:-184799 | None:intergenic |
| CAAACATCCGTACACCTTGG+TGG | 0.599441 | 6_2:+184896 | Msa0903070:CDS |
| TATTTAGGTATGGATTATTG+GGG | 0.600656 | 6_2:+186666 | Msa0903070:intron |
| ACTTCTCTGTCATTCCTGGA+TGG | 0.601358 | 6_2:-188076 | None:intergenic |
| GATTAATTACACATGTAGCA+AGG | 0.602751 | 6_2:-183836 | None:intergenic |
| GAAGACAAAGGAAATTCCAA+CGG | 0.603567 | 6_2:+184846 | Msa0903070:CDS |
| ATATGTTTATCTTCATTCTG+CGG | 0.603615 | 6_2:+183785 | Msa0903070:CDS |
| CACAAAGGAAGAAGATAAGG+TGG | 0.606753 | 6_2:-188620 | None:intergenic |
| CACAGAAAGATCTGATCATG+TGG | 0.608280 | 6_2:+187237 | Msa0903070:CDS |
| TGATACACTAGTAGGTCTCA+TGG | 0.608626 | 6_2:+187532 | Msa0903070:CDS |
| ATGAAAGTGCTGGAAGTCAA+GGG | 0.608733 | 6_2:+184198 | Msa0903070:CDS |
| ACTTTATTAGAAAGAATACC+CGG | 0.610326 | 6_2:+186178 | Msa0903070:intron |
| ATGCAAACATCCGTACACCT+TGG | 0.610700 | 6_2:+184893 | Msa0903070:CDS |
| AAGTCACCAATCTAGCATAA+CGG | 0.612230 | 6_2:-186223 | None:intergenic |
| TGCACTTTGAAGGAGGCTAG+AGG | 0.616682 | 6_2:+187950 | Msa0903070:intron |
| GAAGCCAGACCCTATGGTGG+TGG | 0.622175 | 6_2:+184479 | Msa0903070:CDS |
| ATTGGATTGTCTTTGTTTGG+GGG | 0.624854 | 6_2:-188137 | None:intergenic |
| TTTCACAAGCAACTTCAATG+AGG | 0.625396 | 6_2:+187983 | Msa0903070:CDS |
| TCCTGTGGATCAGAAGGACA+AGG | 0.625807 | 6_2:+184244 | Msa0903070:CDS |
| TAGGTCATATTAAATCATGT+AGG | 0.626220 | 6_2:-188292 | None:intergenic |
| TTTACCTAGATGCCATGACA+AGG | 0.626815 | 6_2:-187607 | None:intergenic |
| AAGGACACGTTTGGGCATGT+CGG | 0.629216 | 6_2:+186698 | Msa0903070:CDS |
| ATAAGGTGGAACCTTGAACA+AGG | 0.632563 | 6_2:-188606 | None:intergenic |
| AACGTTGGACAAACAGCTGT+AGG | 0.633142 | 6_2:+184110 | Msa0903070:CDS |
| TGCTCTTGCAAATCCTATCG+AGG | 0.634463 | 6_2:-187122 | None:intergenic |
| ATCCAGGAATGACAGAGAAG+TGG | 0.637997 | 6_2:+188078 | Msa0903070:CDS |
| AACTAAGGATGAAATGAGTG+TGG | 0.638514 | 6_2:+188484 | Msa0903070:three_prime_UTR |
| GGAAAATATTCTTACCACCA+AGG | 0.641196 | 6_2:-184910 | None:intergenic |
| GTGGAACCTTGAACAAGGAG+AGG | 0.652085 | 6_2:-188601 | None:intergenic |
| TCAAATGCAGAGAATCAGGT+AGG | 0.656077 | 6_2:-186826 | None:intergenic |
| AAGATCTGATCATGTGGACA+TGG | 0.657118 | 6_2:+187243 | Msa0903070:CDS |
| TGAGTCTCGTTAAATCAATG+TGG | 0.659427 | 6_2:+188267 | Msa0903070:three_prime_UTR |
| GGAAAAGTACTGAAACACAA+AGG | 0.692177 | 6_2:-188635 | None:intergenic |
| GTTGAAGCCAGACCCTATGG+TGG | 0.716852 | 6_2:+184476 | Msa0903070:CDS |
| TCACACTATAGATTGGACTG+TGG | 0.742224 | 6_2:+186265 | Msa0903070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATATTCATTAATTATG+TGG | + | chr6_2:186469-186488 | Msa0903070:intron | 10.0% |
| !!! | ATTTAATTAGTATATTTTGT+CGG | - | chr6_2:186533-186552 | None:intergenic | 10.0% |
| !!! | CAAAAAATTTGATTTTATTT+AGG | + | chr6_2:186651-186670 | Msa0903070:intron | 10.0% |
| !! | AGTAAAATAAATACATATTA+TGG | + | chr6_2:187910-187929 | Msa0903070:intron | 10.0% |
| !! | TAATTAGTTGAAATTTAAAT+AGG | - | chr6_2:188314-188333 | None:intergenic | 10.0% |
| !!! | CTATATGAAATTCTTTTTAA+TGG | + | chr6_2:183970-183989 | Msa0903070:intron | 15.0% |
| !!! | TTTTCAAAAAATAAAAAGTG+TGG | + | chr6_2:184383-184402 | Msa0903070:intron | 15.0% |
| !!! | TATAGTCTTAAAAAGTTTTA+GGG | - | chr6_2:184430-184449 | None:intergenic | 15.0% |
| !! | ATCAACTTTAAATAATATGA+TGG | + | chr6_2:184639-184658 | Msa0903070:intron | 15.0% |
| !! | ATACATATATGATTAAAGAA+TGG | + | chr6_2:184962-184981 | Msa0903070:intron | 15.0% |
| !!! | ATTGTTGTTTTTATATATCT+AGG | + | chr6_2:185524-185543 | Msa0903070:intron | 15.0% |
| !! | AATTACTAGACAAAATTATA+TGG | - | chr6_2:185551-185570 | None:intergenic | 15.0% |
| !! | TTTCTATACTTATATTCTTT+AGG | - | chr6_2:186596-186615 | None:intergenic | 15.0% |
| !!! | AAATCAAATTTTTTGAAACA+TGG | - | chr6_2:186646-186665 | None:intergenic | 15.0% |
| !!! | AATTTGATTTTATTTAGGTA+TGG | + | chr6_2:186656-186675 | Msa0903070:intron | 15.0% |
| !!! | AAAAAAAGTTATATCTCTTT+TGG | + | chr6_2:187042-187061 | Msa0903070:intron | 15.0% |
| !! | ACACATAAAAAAAAATGAAA+TGG | - | chr6_2:187315-187334 | None:intergenic | 15.0% |
| !! | TTATAATGTGATCATATAAA+TGG | + | chr6_2:187353-187372 | Msa0903070:intron | 15.0% |
| !!! | TAATATTTCTCTAAGATAAT+TGG | + | chr6_2:187767-187786 | Msa0903070:intron | 15.0% |
| !!! | TAATTTTTATAAAGTTCTCA+AGG | + | chr6_2:187833-187852 | Msa0903070:intron | 15.0% |
| !! | TTAGTTTAATTCATTACTAT+AGG | - | chr6_2:188470-188489 | None:intergenic | 15.0% |
| !! | TATAGTAATGAATTAAACTA+AGG | + | chr6_2:188469-188488 | Msa0903070:three_prime_UTR | 15.0% |
| !! | AATTTCATATAGTTAGTTAG+AGG | - | chr6_2:183962-183981 | None:intergenic | 20.0% |
| !! | TTCTATATGGATAATCATTA+GGG | - | chr6_2:184148-184167 | None:intergenic | 20.0% |
| !! | ACTTTAGTTAAGAGAATATT+TGG | + | chr6_2:184320-184339 | Msa0903070:intron | 20.0% |
| !!! | GTATAGTCTTAAAAAGTTTT+AGG | - | chr6_2:184431-184450 | None:intergenic | 20.0% |
| !!! | ACTTTTTAAGACTATACAAT+TGG | + | chr6_2:184434-184453 | Msa0903070:intron | 20.0% |
| !! | TTCAATTTATGATACATGAT+TGG | + | chr6_2:184574-184593 | Msa0903070:CDS | 20.0% |
| !! | AACTTTAAATAATATGATGG+TGG | + | chr6_2:184642-184661 | Msa0903070:intron | 20.0% |
| !! | TTATATATAAATGATTGCGA+TGG | - | chr6_2:185100-185119 | None:intergenic | 20.0% |
| !! | TTATATATAAATGATTGCGA+TGG | - | chr6_2:185100-185119 | None:intergenic | 20.0% |
| !! | CATGAAACTATATGATAAAA+GGG | + | chr6_2:185628-185647 | Msa0903070:intron | 20.0% |
| !! | ATTGTGTTCTTGAATAAAAA+GGG | - | chr6_2:185822-185841 | None:intergenic | 20.0% |
| !! | AGATATATGTATTACACTTA+CGG | - | chr6_2:186403-186422 | None:intergenic | 20.0% |
| !!! | TTTATTTAGGTATGGATTAT+TGG | + | chr6_2:186664-186683 | Msa0903070:intron | 20.0% |
| !!! | TTATTTAGGTATGGATTATT+GGG | + | chr6_2:186665-186684 | Msa0903070:intron | 20.0% |
| !! | AATATCAATGCAGTTAATAA+GGG | - | chr6_2:186943-186962 | None:intergenic | 20.0% |
| !! | TAATATCAATGCAGTTAATA+AGG | - | chr6_2:186944-186963 | None:intergenic | 20.0% |
| !!! | TGAAATGGTCTTAAAAATAA+AGG | - | chr6_2:187300-187319 | None:intergenic | 20.0% |
| !! | TCTTCTAAATTGATTATATC+TGG | - | chr6_2:187411-187430 | None:intergenic | 20.0% |
| !! | TATTGATACCTATTTCAAAA+TGG | + | chr6_2:187438-187457 | Msa0903070:CDS | 20.0% |
| !! | ATTGATACCTATTTCAAAAT+GGG | + | chr6_2:187439-187458 | Msa0903070:CDS | 20.0% |
| !! | TAAGAAAGTAATCAAAGTAT+TGG | + | chr6_2:187478-187497 | Msa0903070:CDS | 20.0% |
| !! | ATTAGAGTTTAATCATTGTA+CGG | - | chr6_2:187817-187836 | None:intergenic | 20.0% |
| !! | TAAATATTGTTTGTCGAAAA+CGG | + | chr6_2:188332-188351 | Msa0903070:three_prime_UTR | 20.0% |
| !!! | TAGAAAGTACTGAAATAAAA+GGG | - | chr6_2:188659-188678 | None:intergenic | 20.0% |
| !!! | ATAGAAAGTACTGAAATAAA+AGG | - | chr6_2:188660-188679 | None:intergenic | 20.0% |
| ! | ATATGTTTATCTTCATTCTG+CGG | + | chr6_2:183785-183804 | Msa0903070:CDS | 25.0% |
| ! | GTTCTATATGGATAATCATT+AGG | - | chr6_2:184149-184168 | None:intergenic | 25.0% |
| !! | AAGAACTTGAATGATTTTAG+TGG | - | chr6_2:184826-184845 | None:intergenic | 25.0% |
| ! | TCAATCAATGCTTATGTATA+TGG | - | chr6_2:184934-184953 | None:intergenic | 25.0% |
| !! | CTGATAATGTGTTTATAAGT+GGG | + | chr6_2:185173-185192 | Msa0903070:intron | 25.0% |
| !! | TGATAATGTGTTTATAAGTG+GGG | + | chr6_2:185174-185193 | Msa0903070:intron | 25.0% |
| !!! | TGATAATGACCATTTTACAA+CGG | + | chr6_2:185410-185429 | Msa0903070:intron | 25.0% |
| ! | GCATGAAACTATATGATAAA+AGG | + | chr6_2:185627-185646 | Msa0903070:intron | 25.0% |
| ! | AAACTATATGATAAAAGGGA+TGG | + | chr6_2:185632-185651 | Msa0903070:intron | 25.0% |
| ! | AAGTTAAAAATATCAGAGGA+TGG | + | chr6_2:185716-185735 | Msa0903070:CDS | 25.0% |
| ! | CATTGTGTTCTTGAATAAAA+AGG | - | chr6_2:185823-185842 | None:intergenic | 25.0% |
| ! | TGACATATGTTTCAATTTCT+AGG | - | chr6_2:185912-185931 | None:intergenic | 25.0% |
| !! | TATCATCACTTTCTTTTCTA+GGG | - | chr6_2:185959-185978 | None:intergenic | 25.0% |
| !! | ATATCATCACTTTCTTTTCT+AGG | - | chr6_2:185960-185979 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTGTTAACGATC+TGG | + | chr6_2:185979-185998 | Msa0903070:intron | 25.0% |
| ! | ACTTTATTAGAAAGAATACC+CGG | + | chr6_2:186178-186197 | Msa0903070:intron | 25.0% |
| ! | AAACTCGAAAATTAACTAGA+GGG | - | chr6_2:186368-186387 | None:intergenic | 25.0% |
| ! | TAAACTCGAAAATTAACTAG+AGG | - | chr6_2:186369-186388 | None:intergenic | 25.0% |
| !! | TATTTAGGTATGGATTATTG+GGG | + | chr6_2:186666-186685 | Msa0903070:intron | 25.0% |
| ! | ATGAATAAACCAGATAATCA+TGG | + | chr6_2:186749-186768 | Msa0903070:CDS | 25.0% |
| !! | ATGTTGGTGCAAAAATATTT+TGG | - | chr6_2:186909-186928 | None:intergenic | 25.0% |
| !! | AAGGGTATAATAAGTTATGT+TGG | - | chr6_2:186925-186944 | None:intergenic | 25.0% |
| !!! | AAGTGACAATTATTTTGAGA+CGG | + | chr6_2:186966-186985 | Msa0903070:intron | 25.0% |
| !! | TATCTCTTTTGGTATTATAC+AGG | + | chr6_2:187053-187072 | Msa0903070:intron | 25.0% |
| ! | ATATAAATGGTGCAGTTTAT+AGG | + | chr6_2:187366-187385 | Msa0903070:intron | 25.0% |
| ! | TATAAATGGTGCAGTTTATA+GGG | + | chr6_2:187367-187386 | Msa0903070:intron | 25.0% |
| !!! | AAATCTTCCCATTTTGAAAT+AGG | - | chr6_2:187449-187468 | None:intergenic | 25.0% |
| !! | TTTTGTAATATTCCTTGTCA+TGG | + | chr6_2:187595-187614 | Msa0903070:CDS | 25.0% |
| ! | TATAAATATTTGTGTGTCTC+AGG | + | chr6_2:187736-187755 | Msa0903070:intron | 25.0% |
| ! | ATAAATATTTGTGTGTCTCA+GGG | + | chr6_2:187737-187756 | Msa0903070:intron | 25.0% |
| ! | TAAAGTTCTCAAGGAATATT+AGG | + | chr6_2:187842-187861 | Msa0903070:intron | 25.0% |
| !! | TTAGCACAAAGTATTATACT+AGG | + | chr6_2:187869-187888 | Msa0903070:intron | 25.0% |
| !! | TAGCACAAAGTATTATACTA+GGG | + | chr6_2:187870-187889 | Msa0903070:intron | 25.0% |
| ! | CTTAGTCAAGTTAATTAACT+AGG | - | chr6_2:188182-188201 | None:intergenic | 25.0% |
| ! | TAGGTCATATTAAATCATGT+AGG | - | chr6_2:188295-188314 | None:intergenic | 25.0% |
| ! | GTATGTAATGTATTCATGTT+AGG | + | chr6_2:188416-188435 | Msa0903070:intron | 25.0% |
| ! | AAGAATAACCAATGATTAGA+GGG | + | chr6_2:188561-188580 | Msa0903070:intron | 25.0% |
| ! | TACTTTCTATTTCCATGAAA+TGG | + | chr6_2:188670-188689 | Msa0903070:three_prime_UTR | 25.0% |
| ! | AGAAACTAGATTTACTAGTA+TGG | - | chr6_2:188704-188723 | None:intergenic | 25.0% |
| GATTAATTACACATGTAGCA+AGG | - | chr6_2:183839-183858 | None:intergenic | 30.0% | |
| ! | AGTGTGGACTAAAAATGTTA+AGG | + | chr6_2:184399-184418 | Msa0903070:intron | 30.0% |
| ! | TTTTCTCTCCAAAAGTTTTG+TGG | - | chr6_2:184505-184524 | None:intergenic | 30.0% |
| !! | TGAATGATTTTAGTGGACAT+TGG | - | chr6_2:184819-184838 | None:intergenic | 30.0% |
| ! | ATTCAAGTTCTTGAAGACAA+AGG | + | chr6_2:184834-184853 | Msa0903070:CDS | 30.0% |
| ! | CGTTAATGACCATTTTACAA+CGG | + | chr6_2:185008-185027 | Msa0903070:intron | 30.0% |
| CCACTTATAAACACATTATC+AGG | - | chr6_2:185175-185194 | None:intergenic | 30.0% | |
| ! | CCTGATAATGTGTTTATAAG+TGG | + | chr6_2:185172-185191 | Msa0903070:intron | 30.0% |
| CCATCTTAGAAATTGTGATT+GGG | - | chr6_2:185242-185261 | None:intergenic | 30.0% | |
| ACCATCTTAGAAATTGTGAT+TGG | - | chr6_2:185243-185262 | None:intergenic | 30.0% | |
| GTTGTAAAATGGTCATTATC+AGG | - | chr6_2:185411-185430 | None:intergenic | 30.0% | |
| ! | TGAAATTTGGACTTTTGATC+TGG | + | chr6_2:185439-185458 | Msa0903070:intron | 30.0% |
| TGGGAAGTTAAAAATATCAG+AGG | + | chr6_2:185712-185731 | Msa0903070:CDS | 30.0% | |
| ! | TCCATCTTCATTTTGGATAA+GGG | - | chr6_2:185744-185763 | None:intergenic | 30.0% |
| GGTATGTATAATGTTGATCT+TGG | + | chr6_2:185862-185881 | Msa0903070:intron | 30.0% | |
| ACTGAGAGATAAGTAAAACA+TGG | + | chr6_2:186039-186058 | Msa0903070:intron | 30.0% | |
| TCTTCTGAATAATTCGTCAT+TGG | + | chr6_2:186097-186116 | Msa0903070:intron | 30.0% | |
| CAAAGATTCACACTATAGAT+TGG | + | chr6_2:186258-186277 | Msa0903070:CDS | 30.0% | |
| ATTATTGGGGAAGAAATTCA+AGG | + | chr6_2:186679-186698 | Msa0903070:CDS | 30.0% | |
| AATTCTTCAGTTAGAGAGTA+TGG | - | chr6_2:186779-186798 | None:intergenic | 30.0% | |
| AAGAATTTGTCAGTGTCTAT+AGG | + | chr6_2:186792-186811 | Msa0903070:CDS | 30.0% | |
| ATTCCTATGAATGATCTGAT+TGG | + | chr6_2:187076-187095 | Msa0903070:CDS | 30.0% | |
| ! | TGGTCTTAAAAATAAAGGTG+TGG | - | chr6_2:187295-187314 | None:intergenic | 30.0% |
| !! | AGTAATCAAAGTATTGGAAG+AGG | + | chr6_2:187484-187503 | Msa0903070:CDS | 30.0% |
| !! | AAAGTATTGGAAGAGGTATA+TGG | + | chr6_2:187491-187510 | Msa0903070:CDS | 30.0% |
| !! | AAGTATTGGAAGAGGTATAT+GGG | + | chr6_2:187492-187511 | Msa0903070:CDS | 30.0% |
| ! | AATTGGATTGTCTTTGTTTG+GGG | - | chr6_2:188141-188160 | None:intergenic | 30.0% |
| ! | GAATTGGATTGTCTTTGTTT+GGG | - | chr6_2:188142-188161 | None:intergenic | 30.0% |
| ATACGAAGATAAAGTGGAAT+TGG | - | chr6_2:188158-188177 | None:intergenic | 30.0% | |
| ACTCATCTAGAAGAAAAGAA+TGG | + | chr6_2:188509-188528 | Msa0903070:intron | 30.0% | |
| CAAGAATAACCAATGATTAG+AGG | + | chr6_2:188560-188579 | Msa0903070:intron | 30.0% | |
| AAACACAAAGGAAGAAGATA+AGG | - | chr6_2:188626-188645 | None:intergenic | 30.0% | |
| ATGGAATCATATCCATTTCA+TGG | - | chr6_2:188685-188704 | None:intergenic | 30.0% | |
| GTCTAATGGCCAAATACAAT+AGG | - | chr6_2:184061-184080 | None:intergenic | 35.0% | |
| TATCCATATAGAACTGCTGA+TGG | + | chr6_2:184155-184174 | Msa0903070:CDS | 35.0% | |
| TTTCCATCAGCAGTTCTATA+TGG | - | chr6_2:184161-184180 | None:intergenic | 35.0% | |
| TTCCAGCACTTTCATTGAAA+GGG | - | chr6_2:184193-184212 | None:intergenic | 35.0% | |
| TGGAAGAAATATTCTTCCTG+TGG | + | chr6_2:184229-184248 | Msa0903070:CDS | 35.0% | |
| TTTGGAGAGAAAAACATTCC+AGG | + | chr6_2:184512-184531 | Msa0903070:CDS | 35.0% | |
| TTGGAGAGAAAAACATTCCA+GGG | + | chr6_2:184513-184532 | Msa0903070:CDS | 35.0% | |
| ACATGATTGGATAGACCATT+TGG | + | chr6_2:184587-184606 | Msa0903070:CDS | 35.0% | |
| GAAGACAAAGGAAATTCCAA+CGG | + | chr6_2:184846-184865 | Msa0903070:CDS | 35.0% | |
| AAGACAAAGGAAATTCCAAC+GGG | + | chr6_2:184847-184866 | Msa0903070:CDS | 35.0% | |
| GGAAAATATTCTTACCACCA+AGG | - | chr6_2:184913-184932 | None:intergenic | 35.0% | |
| TCATTGAGACCGTTGTAAAA+TGG | - | chr6_2:185020-185039 | None:intergenic | 35.0% | |
| ! | GATCCATCTAATTTTCCGAT+AGG | + | chr6_2:185143-185162 | Msa0903070:intron | 35.0% |
| TCACCTATCGGAAAATTAGA+TGG | - | chr6_2:185149-185168 | None:intergenic | 35.0% | |
| ATTATCAGGTCATCACCTAT+CGG | - | chr6_2:185161-185180 | None:intergenic | 35.0% | |
| ! | CCCAATCACAATTTCTAAGA+TGG | + | chr6_2:185239-185258 | Msa0903070:intron | 35.0% |
| GGTTCGTGGATATAAATTGT+GGG | - | chr6_2:185325-185344 | None:intergenic | 35.0% | |
| TGGTTCGTGGATATAAATTG+TGG | - | chr6_2:185326-185345 | None:intergenic | 35.0% | |
| TCATTGAGACCGTTGTAAAA+TGG | - | chr6_2:185020-185039 | None:intergenic | 35.0% | |
| ACAACGGTCTCAATGAAATT+TGG | + | chr6_2:185426-185445 | Msa0903070:intron | 35.0% | |
| CATGTGTAAGCTCAATTAGA+AGG | - | chr6_2:185605-185624 | None:intergenic | 35.0% | |
| !!! | AAGAAGTTTTGAACAGTGTG+AGG | + | chr6_2:185678-185697 | Msa0903070:CDS | 35.0% |
| ACCCTTATCCAAAATGAAGA+TGG | + | chr6_2:185740-185759 | Msa0903070:CDS | 35.0% | |
| ! | CTCCATCTTCATTTTGGATA+AGG | - | chr6_2:185745-185764 | None:intergenic | 35.0% |
| ! | TTGCTACTCCATCTTCATTT+TGG | - | chr6_2:185751-185770 | None:intergenic | 35.0% |
| AGGTGATGTTCGTAATAGTT+GGG | + | chr6_2:185775-185794 | Msa0903070:CDS | 35.0% | |
| !! | ATCTGGTTCTCATGAGAAAT+GGG | + | chr6_2:185996-186015 | Msa0903070:intron | 35.0% |
| ACATTAGTTCAATTCCTGAG+TGG | - | chr6_2:186077-186096 | None:intergenic | 35.0% | |
| TCTTTACCGTTATGCTAGAT+TGG | + | chr6_2:186217-186236 | Msa0903070:CDS | 35.0% | |
| AAGTCACCAATCTAGCATAA+CGG | - | chr6_2:186226-186245 | None:intergenic | 35.0% | |
| AAGAAATTCAAGGACACGTT+TGG | + | chr6_2:186689-186708 | Msa0903070:CDS | 35.0% | |
| AGAAATTCAAGGACACGTTT+GGG | + | chr6_2:186690-186709 | Msa0903070:CDS | 35.0% | |
| TATGGAACACCATGATTATC+TGG | - | chr6_2:186761-186780 | None:intergenic | 35.0% | |
| TTGGCATACTCTTTGATTAG+TGG | - | chr6_2:186890-186909 | None:intergenic | 35.0% | |
| AGTCCAATCAGATCATTCAT+AGG | - | chr6_2:187082-187101 | None:intergenic | 35.0% | |
| TGGATAGTTTCCAAGTGTTA+GGG | - | chr6_2:187179-187198 | None:intergenic | 35.0% | |
| ATGGATAGTTTCCAAGTGTT+AGG | - | chr6_2:187180-187199 | None:intergenic | 35.0% | |
| ! | ACTAGGTTTCTGAGAAATGA+TGG | - | chr6_2:187199-187218 | None:intergenic | 35.0% |
| ATGGCAGAGAAGAAGATAAA+GGG | + | chr6_2:187551-187570 | Msa0903070:CDS | 35.0% | |
| TGAACTTTCATGCACTTTGA+AGG | + | chr6_2:187940-187959 | Msa0903070:intron | 35.0% | |
| TTTCACAAGCAACTTCAATG+AGG | + | chr6_2:187983-188002 | Msa0903070:CDS | 35.0% | |
| TTCAAGTGCTTTCTCTGTTT+GGG | + | chr6_2:188109-188128 | Msa0903070:CDS | 35.0% | |
| ! | ATTGGATTGTCTTTGTTTGG+GGG | - | chr6_2:188140-188159 | None:intergenic | 35.0% |
| GGAATTGGATTGTCTTTGTT+TGG | - | chr6_2:188143-188162 | None:intergenic | 35.0% | |
| CTAGGAATACGAAGATAAAG+TGG | - | chr6_2:188164-188183 | None:intergenic | 35.0% | |
| !! | AATGCAGACTCTTTAACTTG+AGG | + | chr6_2:188235-188254 | Msa0903070:three_prime_UTR | 35.0% |
| TGAGTCTCGTTAAATCAATG+TGG | + | chr6_2:188267-188286 | Msa0903070:three_prime_UTR | 35.0% | |
| AACTAAGGATGAAATGAGTG+TGG | + | chr6_2:188484-188503 | Msa0903070:three_prime_UTR | 35.0% | |
| !! | GGAAAAGTACTGAAACACAA+AGG | - | chr6_2:188638-188657 | None:intergenic | 35.0% |
| ATTCACTCCATTGACAAGCT+TGG | + | chr6_2:184005-184024 | Msa0903070:CDS | 40.0% | |
| CCATATTCCAAGCTTGTCAA+TGG | - | chr6_2:184015-184034 | None:intergenic | 40.0% | |
| CCATTGACAAGCTTGGAATA+TGG | + | chr6_2:184012-184031 | Msa0903070:CDS | 40.0% | |
| TCTCTTGGGCCTATTGTATT+TGG | + | chr6_2:184049-184068 | Msa0903070:CDS | 40.0% | |
| ! | GGTTGTATTGTTGGTGAAGA+TGG | - | chr6_2:184085-184104 | None:intergenic | 40.0% |
| CGTTGAAGAGGTTGTATTGT+TGG | - | chr6_2:184094-184113 | None:intergenic | 40.0% | |
| CAATACAACCTCTTCAACGT+TGG | + | chr6_2:184095-184114 | Msa0903070:CDS | 40.0% | |
| ACAAACAGCTGTAGGAGTTA+GGG | + | chr6_2:184118-184137 | Msa0903070:CDS | 40.0% | |
| CTTCCAGCACTTTCATTGAA+AGG | - | chr6_2:184194-184213 | None:intergenic | 40.0% | |
| !! | AATGAAAGTGCTGGAAGTCA+AGG | + | chr6_2:184197-184216 | Msa0903070:CDS | 40.0% |
| !! | ATGAAAGTGCTGGAAGTCAA+GGG | + | chr6_2:184198-184217 | Msa0903070:CDS | 40.0% |
| TATTCTTCCTGTGGATCAGA+AGG | + | chr6_2:184238-184257 | Msa0903070:CDS | 40.0% | |
| AGAAAAACATTCCAGGGCAA+TGG | + | chr6_2:184519-184538 | Msa0903070:CDS | 40.0% | |
| GAAAAACATTCCAGGGCAAT+GGG | + | chr6_2:184520-184539 | Msa0903070:CDS | 40.0% | |
| TGATTGGATAGACCATTTGG+AGG | + | chr6_2:184590-184609 | Msa0903070:CDS | 40.0% | |
| TTGATCTCATAGAAACCCGT+TGG | - | chr6_2:184865-184884 | None:intergenic | 40.0% | |
| GGTTTCTATGAGATCAAGAC+TGG | + | chr6_2:184868-184887 | Msa0903070:CDS | 40.0% | |
| ATTCTTACCACCAAGGTGTA+CGG | - | chr6_2:184906-184925 | None:intergenic | 40.0% | |
| ACAACGGTCTCAATGAGATT+TGG | + | chr6_2:185024-185043 | Msa0903070:intron | 40.0% | |
| TGTTATCAGGTTTCCGCTAT+CGG | + | chr6_2:185295-185314 | Msa0903070:intron | 40.0% | |
| TCGTGGATATAAATTGTGGG+TGG | - | chr6_2:185322-185341 | None:intergenic | 40.0% | |
| GTGTGTTAAGAGTTCCACAT+CGG | + | chr6_2:185372-185391 | Msa0903070:intron | 40.0% | |
| TTAAGAGTTCCACATCGGAT+AGG | + | chr6_2:185377-185396 | Msa0903070:intron | 40.0% | |
| ! | AGGGATGGAAGTGTGATATA+TGG | + | chr6_2:185647-185666 | Msa0903070:intron | 40.0% |
| AGTGTGAGGACATTCAAAGA+TGG | + | chr6_2:185692-185711 | Msa0903070:CDS | 40.0% | |
| GTGTGAGGACATTCAAAGAT+GGG | + | chr6_2:185693-185712 | Msa0903070:CDS | 40.0% | |
| GAAGATGGAGTAGCAATTTC+AGG | + | chr6_2:185755-185774 | Msa0903070:CDS | 40.0% | |
| CAGGTGATGTTCGTAATAGT+TGG | + | chr6_2:185774-185793 | Msa0903070:CDS | 40.0% | |
| ! | TGCTGTTTGTGATACTCTCA+AGG | + | chr6_2:185841-185860 | Msa0903070:CDS | 40.0% |
| !! | GATCTGGTTCTCATGAGAAA+TGG | + | chr6_2:185995-186014 | Msa0903070:intron | 40.0% |
| ! | TTCTCATGAGAAATGGGTTC+CGG | + | chr6_2:186002-186021 | Msa0903070:intron | 40.0% |
| TTAGAAAGAATACCCGGACT+TGG | + | chr6_2:186184-186203 | Msa0903070:intron | 40.0% | |
| AGATCTTCATCTTCCAAGTC+CGG | - | chr6_2:186200-186219 | None:intergenic | 40.0% | |
| TCACACTATAGATTGGACTG+TGG | + | chr6_2:186265-186284 | Msa0903070:CDS | 40.0% | |
| !! | CGAGCAAAGTGTCAGTTTTA+AGG | - | chr6_2:186295-186314 | None:intergenic | 40.0% |
| TCAAATGCAGAGAATCAGGT+AGG | - | chr6_2:186829-186848 | None:intergenic | 40.0% | |
| TCTCTCAAATGCAGAGAATC+AGG | - | chr6_2:186833-186852 | None:intergenic | 40.0% | |
| !!! | TGGAGATTTGTTTTGTCCTG+GGG | - | chr6_2:186867-186886 | None:intergenic | 40.0% |
| !!! | GTGGAGATTTGTTTTGTCCT+GGG | - | chr6_2:186868-186887 | None:intergenic | 40.0% |
| GCATACTCTTTGATTAGTGG+TGG | - | chr6_2:186887-186906 | None:intergenic | 40.0% | |
| AATGATCTGATTGGACTACC+AGG | + | chr6_2:187085-187104 | Msa0903070:CDS | 40.0% | |
| GAAAAAACCTTGTCCTCGAT+AGG | + | chr6_2:187109-187128 | Msa0903070:CDS | 40.0% | |
| !! | TGCAAGAGCATTAGTGTCTA+TGG | + | chr6_2:187135-187154 | Msa0903070:CDS | 40.0% |
| !! | GCAAGAGCATTAGTGTCTAT+GGG | + | chr6_2:187136-187155 | Msa0903070:CDS | 40.0% |
| TCTATGGGTCATCAAACTTC+TGG | + | chr6_2:187151-187170 | Msa0903070:CDS | 40.0% | |
| CATCTATGTTCTGTGGTACT+AGG | - | chr6_2:187216-187235 | None:intergenic | 40.0% | |
| CTAGTACCACAGAACATAGA+TGG | + | chr6_2:187214-187233 | Msa0903070:CDS | 40.0% | |
| CACAGAAAGATCTGATCATG+TGG | + | chr6_2:187237-187256 | Msa0903070:CDS | 40.0% | |
| AAGATCTGATCATGTGGACA+TGG | + | chr6_2:187243-187262 | Msa0903070:CDS | 40.0% | |
| CAGTTTATAGGGATAGAGAG+AGG | + | chr6_2:187378-187397 | Msa0903070:intron | 40.0% | |
| GGTATATGGGAATGATGTTG+AGG | + | chr6_2:187505-187524 | Msa0903070:CDS | 40.0% | |
| TGATACACTAGTAGGTCTCA+TGG | + | chr6_2:187532-187551 | Msa0903070:CDS | 40.0% | |
| CATGGCAGAGAAGAAGATAA+AGG | + | chr6_2:187550-187569 | Msa0903070:CDS | 40.0% | |
| TATTCCTTGTCATGGCATCT+AGG | + | chr6_2:187603-187622 | Msa0903070:CDS | 40.0% | |
| TTTACCTAGATGCCATGACA+AGG | - | chr6_2:187610-187629 | None:intergenic | 40.0% | |
| ! | ACTTTCATGCACTTTGAAGG+AGG | + | chr6_2:187943-187962 | Msa0903070:intron | 40.0% |
| TGAGGAGACATACACCAAAA+AGG | + | chr6_2:188001-188020 | Msa0903070:CDS | 40.0% | |
| GAGGAGACATACACCAAAAA+GGG | + | chr6_2:188002-188021 | Msa0903070:CDS | 40.0% | |
| GACATACACCAAAAAGGGTT+TGG | + | chr6_2:188007-188026 | Msa0903070:CDS | 40.0% | |
| ACACCAAAAAGGGTTTGGAA+TGG | + | chr6_2:188012-188031 | Msa0903070:CDS | 40.0% | |
| ! | CACCAAAAAGGGTTTGGAAT+GGG | + | chr6_2:188013-188032 | Msa0903070:CDS | 40.0% |
| GAACACAACTGAGAGCTTAA+AGG | + | chr6_2:188037-188056 | Msa0903070:CDS | 40.0% | |
| CTTCAAGTGCTTTCTCTGTT+TGG | + | chr6_2:188108-188127 | Msa0903070:CDS | 40.0% | |
| AGAAGAAAAGAATGGAGAGC+TGG | + | chr6_2:188517-188536 | Msa0903070:intron | 40.0% | |
| GCTGGAAAATGATCATGAAC+TGG | + | chr6_2:188535-188554 | Msa0903070:intron | 40.0% | |
| CTCATCAACCCTCTAATCAT+TGG | - | chr6_2:188572-188591 | None:intergenic | 40.0% | |
| ATAAGGTGGAACCTTGAACA+AGG | - | chr6_2:188609-188628 | None:intergenic | 40.0% | |
| CACAAAGGAAGAAGATAAGG+TGG | - | chr6_2:188623-188642 | None:intergenic | 40.0% | |
| CACCGTTTACCTGTTCTCTT+GGG | + | chr6_2:184035-184054 | Msa0903070:CDS | 45.0% | |
| TACAATAGGCCCAAGAGAAC+AGG | - | chr6_2:184047-184066 | None:intergenic | 45.0% | |
| TTGGTGAAGATGGCGTCTAA+TGG | - | chr6_2:184075-184094 | None:intergenic | 45.0% | |
| CTGTTTGTCCAACGTTGAAG+AGG | - | chr6_2:184106-184125 | None:intergenic | 45.0% | |
| AACGTTGGACAAACAGCTGT+AGG | + | chr6_2:184110-184129 | Msa0903070:CDS | 45.0% | |
| GACAAACAGCTGTAGGAGTT+AGG | + | chr6_2:184117-184136 | Msa0903070:CDS | 45.0% | |
| ! | GACCCTTTCAATGAAAGTGC+TGG | + | chr6_2:184188-184207 | Msa0903070:CDS | 45.0% |
| GGAAGTCAAGGGTCTTTCAT+TGG | + | chr6_2:184209-184228 | Msa0903070:CDS | 45.0% | |
| TGAATTGTTTCCCATTGCCC+TGG | - | chr6_2:184533-184552 | None:intergenic | 45.0% | |
| TCAATGTGTTAGCAGCTGCT+TGG | + | chr6_2:184550-184569 | Msa0903070:CDS | 45.0% | |
| CCTGATTAGTGTCCTCCAAA+TGG | - | chr6_2:184605-184624 | None:intergenic | 45.0% | |
| CCATTTGGAGGACACTAATC+AGG | + | chr6_2:184602-184621 | Msa0903070:CDS | 45.0% | |
| GGACACTAATCAGGTGCAAA+TGG | + | chr6_2:184611-184630 | Msa0903070:intron | 45.0% | |
| ATGCAAACATCCGTACACCT+TGG | + | chr6_2:184893-184912 | Msa0903070:CDS | 45.0% | |
| GCTTCACAATCCGACTTTGT+GGG | + | chr6_2:185205-185224 | Msa0903070:intron | 45.0% | |
| CTTCACAATCCGACTTTGTG+GGG | + | chr6_2:185206-185225 | Msa0903070:intron | 45.0% | |
| CTAACACAACCCCACAAAGT+CGG | - | chr6_2:185218-185237 | None:intergenic | 45.0% | |
| ATCAGAGCCTCTCCAAGATT+AGG | + | chr6_2:185267-185286 | Msa0903070:intron | 45.0% | |
| GATAACAGGTGGCCTAATCT+TGG | - | chr6_2:185282-185301 | None:intergenic | 45.0% | |
| AGATTAGGCCACCTGTTATC+AGG | + | chr6_2:185282-185301 | Msa0903070:intron | 45.0% | |
| !! | GATAGCGGAAACCTGATAAC+AGG | - | chr6_2:185296-185315 | None:intergenic | 45.0% |
| GTTATCAGGTTTCCGCTATC+GGG | + | chr6_2:185296-185315 | Msa0903070:intron | 45.0% | |
| ACAACCAGCACTATTAGGCT+TGG | - | chr6_2:185346-185365 | None:intergenic | 45.0% | |
| !! | CCTAATAGTGCTGGTTGTGA+GGG | + | chr6_2:185348-185367 | Msa0903070:intron | 45.0% |
| !! | CTAATAGTGCTGGTTGTGAG+GGG | + | chr6_2:185349-185368 | Msa0903070:intron | 45.0% |
| !! | TAATAGTGCTGGTTGTGAGG+GGG | + | chr6_2:185350-185369 | Msa0903070:intron | 45.0% |
| TCCACATCGGATAGGTGATA+TGG | + | chr6_2:185385-185404 | Msa0903070:intron | 45.0% | |
| GATGTTCGTAATAGTTGGGC+TGG | + | chr6_2:185779-185798 | Msa0903070:CDS | 45.0% | |
| ! | AGAAATGGGTTCCGGTAATC+CGG | + | chr6_2:186010-186029 | Msa0903070:intron | 45.0% |
| CTTATCTCTCAGTCAGACTC+CGG | - | chr6_2:186032-186051 | None:intergenic | 45.0% | |
| GGTCAAGAATTGTTCCACTC+AGG | + | chr6_2:186060-186079 | Msa0903070:intron | 45.0% | |
| GATCTTCATCTTCCAAGTCC+GGG | - | chr6_2:186199-186218 | None:intergenic | 45.0% | |
| AAAACTGACACTTTGCTCGC+AGG | + | chr6_2:186296-186315 | Msa0903070:CDS | 45.0% | |
| ! | TGACGCTATCTTTGGTGGAT+TGG | + | chr6_2:186721-186740 | Msa0903070:CDS | 45.0% |
| !! | GCTATCTTTGGTGGATTGGT+GGG | + | chr6_2:186725-186744 | Msa0903070:CDS | 45.0% |
| !!! | AGATTTGTTTTGTCCTGGGG+TGG | - | chr6_2:186864-186883 | None:intergenic | 45.0% |
| !!! | GGTGGAGATTTGTTTTGTCC+TGG | - | chr6_2:186869-186888 | None:intergenic | 45.0% |
| !!! | GAGGACAAGGTTTTTTCTCC+TGG | - | chr6_2:187106-187125 | None:intergenic | 45.0% |
| TGCAAATCCTATCGAGGACA+AGG | - | chr6_2:187119-187138 | None:intergenic | 45.0% | |
| TGCTCTTGCAAATCCTATCG+AGG | - | chr6_2:187125-187144 | None:intergenic | 45.0% | |
| TCTGTGCCATCTATGTTCTG+TGG | - | chr6_2:187223-187242 | None:intergenic | 45.0% | |
| GAGGAGCTTGATACACTAGT+AGG | + | chr6_2:187524-187543 | Msa0903070:CDS | 45.0% | |
| ! | CACCCATTCCAAACCCTTTT+TGG | - | chr6_2:188018-188037 | None:intergenic | 45.0% |
| ACTTCTCTGTCATTCCTGGA+TGG | - | chr6_2:188079-188098 | None:intergenic | 45.0% | |
| ATCCAGGAATGACAGAGAAG+TGG | + | chr6_2:188078-188097 | Msa0903070:CDS | 45.0% | |
| AACCACTTCTCTGTCATTCC+TGG | - | chr6_2:188083-188102 | None:intergenic | 45.0% | |
| TTGCATCCTCTCCTTGTTCA+AGG | + | chr6_2:188595-188614 | Msa0903070:three_prime_UTR | 45.0% | |
| GCACCGTTTACCTGTTCTCT+TGG | + | chr6_2:184034-184053 | Msa0903070:CDS | 50.0% | |
| GGCCCAAGAGAACAGGTAAA+CGG | - | chr6_2:184040-184059 | None:intergenic | 50.0% | |
| TCCTGTGGATCAGAAGGACA+AGG | + | chr6_2:184244-184263 | Msa0903070:CDS | 50.0% | |
| ACCTTGTCCTTCTGATCCAC+AGG | - | chr6_2:184248-184267 | None:intergenic | 50.0% | |
| GTTGTTGAAGCCAGACCCTA+TGG | + | chr6_2:184473-184492 | Msa0903070:intron | 50.0% | |
| ! | GTTTTGTGGCCACCACCATA+GGG | - | chr6_2:184491-184510 | None:intergenic | 50.0% |
| !! | AGTTTTGTGGCCACCACCAT+AGG | - | chr6_2:184492-184511 | None:intergenic | 50.0% |
| !! | GGTGGTGGCCACAAAACTTT+TGG | + | chr6_2:184494-184513 | Msa0903070:CDS | 50.0% |
| !! | CATTGGCTTGCAACTTCACG+TGG | - | chr6_2:184802-184821 | None:intergenic | 50.0% |
| CAAACATCCGTACACCTTGG+TGG | + | chr6_2:184896-184915 | Msa0903070:CDS | 50.0% | |
| CAAAGTCGGATTGTGAAGCG+AGG | - | chr6_2:185204-185223 | None:intergenic | 50.0% | |
| CGCTTCACAATCCGACTTTG+TGG | + | chr6_2:185204-185223 | Msa0903070:intron | 50.0% | |
| CGACTTTGTGGGGTTGTGTT+AGG | + | chr6_2:185216-185235 | Msa0903070:intron | 50.0% | |
| AGCGGAAACCTGATAACAGG+TGG | - | chr6_2:185293-185312 | None:intergenic | 50.0% | |
| ! | GCACTATTAGGCTTGGTTCG+TGG | - | chr6_2:185339-185358 | None:intergenic | 50.0% |
| CGAACCAAGCCTAATAGTGC+TGG | + | chr6_2:185339-185358 | Msa0903070:intron | 50.0% | |
| !! | GCCTAATAGTGCTGGTTGTG+AGG | + | chr6_2:185347-185366 | Msa0903070:intron | 50.0% |
| CCCTCACAACCAGCACTATT+AGG | - | chr6_2:185351-185370 | None:intergenic | 50.0% | |
| GCCATATCACCTATCCGATG+TGG | - | chr6_2:185389-185408 | None:intergenic | 50.0% | |
| TCAGTCAGACTCCGGATTAC+CGG | - | chr6_2:186024-186043 | None:intergenic | 50.0% | |
| AAGGACACGTTTGGGCATGT+CGG | + | chr6_2:186698-186717 | Msa0903070:CDS | 50.0% | |
| CATGTCGGTGACGCTATCTT+TGG | + | chr6_2:186713-186732 | Msa0903070:CDS | 50.0% | |
| !! | CGCTATCTTTGGTGGATTGG+TGG | + | chr6_2:186724-186743 | Msa0903070:CDS | 50.0% |
| AGAGATATATCTGCCACCCC+AGG | + | chr6_2:186848-186867 | Msa0903070:CDS | 50.0% | |
| ACTTCTGGTGCCCTAACACT+TGG | + | chr6_2:187166-187185 | Msa0903070:CDS | 50.0% | |
| ! | TGCACTTTGAAGGAGGCTAG+AGG | + | chr6_2:187950-187969 | Msa0903070:intron | 50.0% |
| GTGATTGATCGTCACCATCC+AGG | + | chr6_2:188062-188081 | Msa0903070:CDS | 50.0% | |
| GTGGAACCTTGAACAAGGAG+AGG | - | chr6_2:188604-188623 | None:intergenic | 50.0% | |
| GTTGAAGCCAGACCCTATGG+TGG | + | chr6_2:184476-184495 | Msa0903070:CDS | 55.0% | |
| CAGGTGGCCTAATCTTGGAG+AGG | - | chr6_2:185277-185296 | None:intergenic | 55.0% | |
| AATTGTGGGTGGCCCGATAG+CGG | - | chr6_2:185311-185330 | None:intergenic | 55.0% | |
| TCGCAGGCATGCGTGGAAAT+TGG | + | chr6_2:186312-186331 | Msa0903070:CDS | 55.0% | |
| GTCGGTGACGCTATCTTTGG+TGG | + | chr6_2:186716-186735 | Msa0903070:CDS | 55.0% | |
| GAAGGAGGCTAGAGGCTGAT+AGG | + | chr6_2:187958-187977 | Msa0903070:intron | 55.0% | |
| GAAGCCAGACCCTATGGTGG+TGG | + | chr6_2:184479-184498 | Msa0903070:CDS | 60.0% | |
| ACTTTGCTCGCAGGCATGCG+TGG | + | chr6_2:186305-186324 | Msa0903070:CDS | 60.0% | |
| GTGGCCACCACCATAGGGTC+TGG | - | chr6_2:184486-184505 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 183768 | 188738 | 183768 | ID=Msa0903070;Name=Msa0903070 |
| chr6_2 | mRNA | 183768 | 188738 | 183768 | ID=Msa0903070-mRNA-1;Parent=Msa0903070;Name=Msa0903070-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.90|0.91|1|0.81|0.75|12|467|629 |
| chr6_2 | exon | 183768 | 183848 | 183768 | ID=Msa0903070-mRNA-1:exon:87;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 184002 | 184265 | 184002 | ID=Msa0903070-mRNA-1:exon:88;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 184474 | 184623 | 184474 | ID=Msa0903070-mRNA-1:exon:89;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 184784 | 184917 | 184784 | ID=Msa0903070-mRNA-1:exon:90;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 185649 | 185862 | 185649 | ID=Msa0903070-mRNA-1:exon:91;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 186188 | 186333 | 186188 | ID=Msa0903070-mRNA-1:exon:92;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 186673 | 186900 | 186673 | ID=Msa0903070-mRNA-1:exon:93;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 187075 | 187277 | 187075 | ID=Msa0903070-mRNA-1:exon:94;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 187381 | 187624 | 187381 | ID=Msa0903070-mRNA-1:exon:95;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 187962 | 188393 | 187962 | ID=Msa0903070-mRNA-1:exon:96;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 188433 | 188521 | 188433 | ID=Msa0903070-mRNA-1:exon:97;Parent=Msa0903070-mRNA-1 |
| chr6_2 | exon | 188567 | 188738 | 188567 | ID=Msa0903070-mRNA-1:exon:98;Parent=Msa0903070-mRNA-1 |
| chr6_2 | CDS | 183768 | 183848 | 183768 | ID=Msa0903070-mRNA-1:cds;Parent=Msa0903070-mRNA-1 |
| chr6_2 | CDS | 184002 | 184265 | 184002 | ID=Msa0903070-mRNA-1:cds;Parent=Msa0903070-mRNA-1 |
| chr6_2 | CDS | 184474 | 184623 | 184474 | ID=Msa0903070-mRNA-1:cds;Parent=Msa0903070-mRNA-1 |
| chr6_2 | CDS | 184784 | 184917 | 184784 | ID=Msa0903070-mRNA-1:cds;Parent=Msa0903070-mRNA-1 |
| chr6_2 | CDS | 185649 | 185862 | 185649 | ID=Msa0903070-mRNA-1:cds;Parent=Msa0903070-mRNA-1 |
| chr6_2 | CDS | 186188 | 186333 | 186188 | ID=Msa0903070-mRNA-1:cds;Parent=Msa0903070-mRNA-1 |
| chr6_2 | CDS | 186673 | 186900 | 186673 | ID=Msa0903070-mRNA-1:cds;Parent=Msa0903070-mRNA-1 |
| chr6_2 | CDS | 187075 | 187277 | 187075 | ID=Msa0903070-mRNA-1:cds;Parent=Msa0903070-mRNA-1 |
| chr6_2 | CDS | 187381 | 187624 | 187381 | ID=Msa0903070-mRNA-1:cds;Parent=Msa0903070-mRNA-1 |
| chr6_2 | CDS | 187962 | 188187 | 187962 | ID=Msa0903070-mRNA-1:cds;Parent=Msa0903070-mRNA-1 |
| chr6_2 | three_prime_UTR | 188188 | 188393 | 188188 | ID=Msa0903070-mRNA-1:three_prime_utr;Parent=Msa0903070-mRNA-1 |
| chr6_2 | three_prime_UTR | 188433 | 188521 | 188433 | ID=Msa0903070-mRNA-1:three_prime_utr;Parent=Msa0903070-mRNA-1 |
| chr6_2 | three_prime_UTR | 188567 | 188738 | 188567 | ID=Msa0903070-mRNA-1:three_prime_utr;Parent=Msa0903070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
