Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081090 | XP_003591273.1 | 91.379 | 754 | 44 | 3 | 1 | 752 | 1 | 735 | 0.0 | 1405 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081090 | sp|O82462|SYEC_ARATH | 69.179 | 743 | 193 | 8 | 8 | 746 | 6 | 716 | 0.0 | 1059 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081090 | G7IAE3 | 91.379 | 754 | 44 | 3 | 1 | 752 | 1 | 735 | 0.0 | 1405 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0081090 | 0.861830 | 7.788523e-64 | -8.615850e-47 |
| Msa0002580 | Msa0081090 | 0.809859 | 1.536493e-50 | -8.615850e-47 |
| Msa0005890 | Msa0081090 | 0.825583 | 4.331923e-54 | -8.615850e-47 |
| Msa0008110 | Msa0081090 | 0.801283 | 9.687212e-49 | -8.615850e-47 |
| Msa0021500 | Msa0081090 | 0.802003 | 6.894880e-49 | -8.615850e-47 |
| Msa0027820 | Msa0081090 | 0.825186 | 5.376875e-54 | -8.615850e-47 |
| Msa0028420 | Msa0081090 | 0.844680 | 6.507123e-59 | -8.615850e-47 |
| Msa0032090 | Msa0081090 | 0.817695 | 2.885179e-52 | -8.615850e-47 |
| Msa0032430 | Msa0081090 | 0.855947 | 4.481824e-62 | -8.615850e-47 |
| Msa0032920 | Msa0081090 | -0.807126 | 5.886496e-50 | -8.615850e-47 |
| Msa0032960 | Msa0081090 | -0.807209 | 5.653364e-50 | -8.615850e-47 |
| Msa0034810 | Msa0081090 | 0.807047 | 6.117425e-50 | -8.615850e-47 |
| Msa0036870 | Msa0081090 | 0.808808 | 2.581616e-50 | -8.615850e-47 |
| Msa0042610 | Msa0081090 | 0.805244 | 1.465530e-49 | -8.615850e-47 |
| Msa0043560 | Msa0081090 | 0.803879 | 2.824192e-49 | -8.615850e-47 |
| Msa0044090 | Msa0081090 | 0.817774 | 2.769475e-52 | -8.615850e-47 |
| Msa0045790 | Msa0081090 | 0.801062 | 1.074697e-48 | -8.615850e-47 |
| Msa0047030 | Msa0081090 | 0.804039 | 2.616052e-49 | -8.615850e-47 |
| Msa0047070 | Msa0081090 | 0.820008 | 8.604460e-53 | -8.615850e-47 |
| Msa0052260 | Msa0081090 | 0.803484 | 3.409751e-49 | -8.615850e-47 |
| Msa0061290 | Msa0081090 | 0.824432 | 8.096130e-54 | -8.615850e-47 |
| Msa0061340 | Msa0081090 | 0.821500 | 3.907271e-53 | -8.615850e-47 |
| Msa0079380 | Msa0081090 | 0.832147 | 1.116023e-55 | -8.615850e-47 |
| Msa0081090 | Msa0081520 | 0.818313 | 2.092419e-52 | -8.615850e-47 |
| Msa0081090 | Msa0089630 | 0.820688 | 6.011056e-53 | -8.615850e-47 |
| Msa0081090 | Msa0090400 | 0.860340 | 2.211370e-63 | -8.615850e-47 |
| Msa0081090 | Msa0092790 | 0.855417 | 6.398795e-62 | -8.615850e-47 |
| Msa0081090 | Msa0094780 | 0.802884 | 4.538709e-49 | -8.615850e-47 |
| Msa0081090 | Msa0115080 | 0.816070 | 6.684944e-52 | -8.615850e-47 |
| Msa0081090 | Msa0124060 | 0.863337 | 2.674932e-64 | -8.615850e-47 |
| Msa0081090 | Msa0131900 | 0.812435 | 4.246802e-51 | -8.615850e-47 |
| Msa0081090 | Msa0136650 | 0.807605 | 4.657696e-50 | -8.615850e-47 |
| Msa0081090 | Msa0137880 | 0.846147 | 2.606600e-59 | -8.615850e-47 |
| Msa0081090 | Msa0152350 | 0.817374 | 3.409027e-52 | -8.615850e-47 |
| Msa0081090 | Msa0152400 | 0.806847 | 6.742082e-50 | -8.615850e-47 |
| Msa0081090 | Msa0167520 | 0.800172 | 1.632541e-48 | -8.615850e-47 |
| Msa0081090 | Msa0168500 | 0.843619 | 1.253398e-58 | -8.615850e-47 |
| Msa0081090 | Msa0172070 | 0.846845 | 1.681110e-59 | -8.615850e-47 |
| Msa0081090 | Msa0174450 | 0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa0081090 | Msa0178560 | 0.830214 | 3.330832e-55 | -8.615850e-47 |
| Msa0081090 | Msa0204770 | 0.802986 | 4.324581e-49 | -8.615850e-47 |
| Msa0081090 | Msa0211030 | 0.801860 | 7.378591e-49 | -8.615850e-47 |
| Msa0081090 | Msa0211150 | 0.812582 | 3.944008e-51 | -8.615850e-47 |
| Msa0081090 | Msa0221470 | 0.808750 | 2.656303e-50 | -8.615850e-47 |
| Msa0081090 | Msa0223080 | 0.800409 | 1.461067e-48 | -8.615850e-47 |
| Msa0081090 | Msa0225100 | 0.809147 | 2.184174e-50 | -8.615850e-47 |
| Msa0081090 | Msa0225750 | 0.802720 | 4.907180e-49 | -8.615850e-47 |
| Msa0081090 | Msa0225860 | 0.847358 | 1.216586e-59 | -8.615850e-47 |
| Msa0081090 | Msa0229230 | 0.803265 | 3.785333e-49 | -8.615850e-47 |
| Msa0081090 | Msa0244640 | 0.867127 | 1.720635e-65 | -8.615850e-47 |
| Msa0081090 | Msa0255090 | 0.836379 | 9.686592e-57 | -8.615850e-47 |
| Msa0081090 | Msa0259380 | 0.831253 | 1.853808e-55 | -8.615850e-47 |
| Msa0081090 | Msa0266180 | 0.805608 | 1.229886e-49 | -8.615850e-47 |
| Msa0081090 | Msa0267110 | 0.845271 | 4.507514e-59 | -8.615850e-47 |
| Msa0081090 | Msa0270340 | 0.802521 | 5.393592e-49 | -8.615850e-47 |
| Msa0081090 | Msa0283330 | 0.831297 | 1.807580e-55 | -8.615850e-47 |
| Msa0081090 | Msa0287740 | 0.818981 | 1.475953e-52 | -8.615850e-47 |
| Msa0081090 | Msa0290720 | 0.835011 | 2.150480e-56 | -8.615850e-47 |
| Msa0081090 | Msa0292400 | 0.812043 | 5.170712e-51 | -8.615850e-47 |
| Msa0081090 | Msa0298470 | 0.819005 | 1.457526e-52 | -8.615850e-47 |
| Msa0081090 | Msa0321620 | 0.835578 | 1.546820e-56 | -8.615850e-47 |
| Msa0081090 | Msa0337700 | 0.813947 | 1.977407e-51 | -8.615850e-47 |
| Msa0081090 | Msa0342310 | 0.802645 | 5.084421e-49 | -8.615850e-47 |
| Msa0081090 | Msa0358890 | 0.826263 | 2.985552e-54 | -8.615850e-47 |
| Msa0081090 | Msa0369790 | 0.836699 | 8.029141e-57 | -8.615850e-47 |
| Msa0081090 | Msa0378720 | 0.825418 | 4.740150e-54 | -8.615850e-47 |
| Msa0081090 | Msa0380620 | 0.800397 | 1.468854e-48 | -8.615850e-47 |
| Msa0081090 | Msa0392510 | 0.817803 | 2.727813e-52 | -8.615850e-47 |
| Msa0081090 | Msa0405130 | 0.826915 | 2.087065e-54 | -8.615850e-47 |
| Msa0081090 | Msa0410650 | 0.808249 | 3.398341e-50 | -8.615850e-47 |
| Msa0081090 | Msa0419410 | 0.851839 | 6.830762e-61 | -8.615850e-47 |
| Msa0081090 | Msa0424790 | 0.802151 | 6.428808e-49 | -8.615850e-47 |
| Msa0081090 | Msa0428150 | 0.827525 | 1.491101e-54 | -8.615850e-47 |
| Msa0081090 | Msa0428920 | 0.811362 | 7.270910e-51 | -8.615850e-47 |
| Msa0081090 | Msa0430260 | 0.809347 | 1.978996e-50 | -8.615850e-47 |
| Msa0081090 | Msa0430750 | 0.800415 | 1.456758e-48 | -8.615850e-47 |
| Msa0081090 | Msa0436910 | 0.818941 | 1.507225e-52 | -8.615850e-47 |
| Msa0081090 | Msa0455760 | 0.807158 | 5.793979e-50 | -8.615850e-47 |
| Msa0081090 | Msa0462500 | 0.828973 | 6.673122e-55 | -8.615850e-47 |
| Msa0081090 | Msa0464000 | 0.835226 | 1.898735e-56 | -8.615850e-47 |
| Msa0081090 | Msa0464380 | 0.810554 | 1.088179e-50 | -8.615850e-47 |
| Msa0081090 | Msa0464680 | 0.820522 | 6.560031e-53 | -8.615850e-47 |
| Msa0081090 | Msa0465410 | 0.810716 | 1.003649e-50 | -8.615850e-47 |
| Msa0081090 | Msa0467490 | 0.837738 | 4.353996e-57 | -8.615850e-47 |
| Msa0081090 | Msa0468270 | 0.818765 | 1.652038e-52 | -8.615850e-47 |
| Msa0081090 | Msa0474520 | 0.834501 | 2.889896e-56 | -8.615850e-47 |
| Msa0081090 | Msa0474730 | 0.822965 | 1.786144e-53 | -8.615850e-47 |
| Msa0081090 | Msa0476650 | 0.811252 | 7.681669e-51 | -8.615850e-47 |
| Msa0081090 | Msa0479170 | 0.810345 | 1.207373e-50 | -8.615850e-47 |
| Msa0081090 | Msa0483100 | 0.800521 | 1.386024e-48 | -8.615850e-47 |
| Msa0081090 | Msa0504210 | 0.806777 | 6.977218e-50 | -8.615850e-47 |
| Msa0081090 | Msa0509550 | 0.824293 | 8.731756e-54 | -8.615850e-47 |
| Msa0081090 | Msa0511270 | 0.804952 | 1.687546e-49 | -8.615850e-47 |
| Msa0081090 | Msa0516170 | 0.815711 | 8.036149e-52 | -8.615850e-47 |
| Msa0081090 | Msa0529890 | 0.821173 | 4.646582e-53 | -8.615850e-47 |
| Msa0081090 | Msa0530780 | 0.842267 | 2.870907e-58 | -8.615850e-47 |
| Msa0081090 | Msa0531180 | 0.829196 | 5.892431e-55 | -8.615850e-47 |
| Msa0081090 | Msa0532070 | 0.828679 | 7.864021e-55 | -8.615850e-47 |
| Msa0081090 | Msa0534720 | 0.804085 | 2.558316e-49 | -8.615850e-47 |
| Msa0081090 | Msa0542520 | 0.808197 | 3.485957e-50 | -8.615850e-47 |
| Msa0081090 | Msa0545340 | 0.808781 | 2.616137e-50 | -8.615850e-47 |
| Msa0081090 | Msa0546680 | 0.806811 | 6.860249e-50 | -8.615850e-47 |
| Msa0081090 | Msa0547900 | 0.817351 | 3.449665e-52 | -8.615850e-47 |
| Msa0081090 | Msa0548470 | 0.801739 | 7.810296e-49 | -8.615850e-47 |
| Msa0081090 | Msa0569200 | 0.838200 | 3.312809e-57 | -8.615850e-47 |
| Msa0081090 | Msa0580370 | 0.856907 | 2.342070e-62 | -8.615850e-47 |
| Msa0081090 | Msa0583360 | -0.804817 | 1.800603e-49 | -8.615850e-47 |
| Msa0081090 | Msa0583830 | 0.801725 | 7.863860e-49 | -8.615850e-47 |
| Msa0081090 | Msa0585560 | 0.821071 | 4.905001e-53 | -8.615850e-47 |
| Msa0081090 | Msa0597790 | 0.821424 | 4.068276e-53 | -8.615850e-47 |
| Msa0081090 | Msa0602460 | 0.808547 | 2.935455e-50 | -8.615850e-47 |
| Msa0081090 | Msa0602880 | 0.814049 | 1.877910e-51 | -8.615850e-47 |
| Msa0081090 | Msa0625720 | 0.821359 | 4.211504e-53 | -8.615850e-47 |
| Msa0081090 | Msa0626450 | 0.838084 | 3.547272e-57 | -8.615850e-47 |
| Msa0081090 | Msa0626490 | 0.833223 | 6.034334e-56 | -8.615850e-47 |
| Msa0081090 | Msa0643940 | 0.815377 | 9.535667e-52 | -8.615850e-47 |
| Msa0081090 | Msa0663390 | 0.810893 | 9.192435e-51 | -8.615850e-47 |
| Msa0081090 | Msa0664600 | 0.836117 | 1.129225e-56 | -8.615850e-47 |
| Msa0081090 | Msa0677410 | 0.829539 | 4.865256e-55 | -8.615850e-47 |
| Msa0081090 | Msa0681250 | 0.810716 | 1.003649e-50 | -8.615850e-47 |
| Msa0081090 | Msa0681270 | 0.820434 | 6.872866e-53 | -8.615850e-47 |
| Msa0081090 | Msa0682330 | 0.800863 | 1.180582e-48 | -8.615850e-47 |
| Msa0081090 | Msa0683470 | 0.818272 | 2.137469e-52 | -8.615850e-47 |
| Msa0081090 | Msa0717890 | 0.821342 | 4.248299e-53 | -8.615850e-47 |
| Msa0081090 | Msa0730430 | 0.825717 | 4.025265e-54 | -8.615850e-47 |
| Msa0081090 | Msa0733390 | 0.801439 | 9.001467e-49 | -8.615850e-47 |
| Msa0081090 | Msa0736960 | 0.824571 | 7.510652e-54 | -8.615850e-47 |
| Msa0081090 | Msa0741220 | 0.838277 | 3.163361e-57 | -8.615850e-47 |
| Msa0081090 | Msa0765240 | 0.817757 | 2.794198e-52 | -8.615850e-47 |
| Msa0081090 | Msa0765910 | 0.804058 | 2.591396e-49 | -8.615850e-47 |
| Msa0081090 | Msa0770720 | 0.817853 | 2.657888e-52 | -8.615850e-47 |
| Msa0081090 | Msa0778590 | 0.830976 | 2.168605e-55 | -8.615850e-47 |
| Msa0081090 | Msa0780270 | 0.827055 | 1.932361e-54 | -8.615850e-47 |
| Msa0081090 | Msa0795870 | 0.851291 | 9.766829e-61 | -8.615850e-47 |
| Msa0081090 | Msa0799970 | 0.805187 | 1.506553e-49 | -8.615850e-47 |
| Msa0081090 | Msa0806790 | 0.817495 | 3.202165e-52 | -8.615850e-47 |
| Msa0081090 | Msa0829300 | 0.807585 | 4.703806e-50 | -8.615850e-47 |
| Msa0081090 | Msa0829330 | 0.813263 | 2.796721e-51 | -8.615850e-47 |
| Msa0081090 | Msa0831110 | 0.812435 | 4.245116e-51 | -8.615850e-47 |
| Msa0081090 | Msa0832340 | 0.804345 | 2.258613e-49 | -8.615850e-47 |
| Msa0081090 | Msa0833650 | 0.856295 | 3.543884e-62 | -8.615850e-47 |
| Msa0081090 | Msa0835490 | 0.816834 | 4.508035e-52 | -8.615850e-47 |
| Msa0081090 | Msa0861510 | 0.821527 | 3.850115e-53 | -8.615850e-47 |
| Msa0081090 | Msa0861600 | 0.833138 | 6.333450e-56 | -8.615850e-47 |
| Msa0081090 | Msa0861850 | 0.836593 | 8.544483e-57 | -8.615850e-47 |
| Msa0081090 | Msa0866520 | 0.813066 | 3.089097e-51 | -8.615850e-47 |
| Msa0081090 | Msa0875290 | 0.803092 | 4.111241e-49 | -8.615850e-47 |
| Msa0081090 | Msa0876190 | 0.803377 | 3.588089e-49 | -8.615850e-47 |
| Msa0081090 | Msa0928210 | 0.808321 | 3.280531e-50 | -8.615850e-47 |
| Msa0081090 | Msa0935470 | 0.805605 | 1.231448e-49 | -8.615850e-47 |
| Msa0081090 | Msa0935820 | 0.809786 | 1.593128e-50 | -8.615850e-47 |
| Msa0081090 | Msa0944700 | 0.819432 | 1.164755e-52 | -8.615850e-47 |
| Msa0081090 | Msa0945110 | 0.844873 | 5.773576e-59 | -8.615850e-47 |
| Msa0081090 | Msa0967870 | 0.805219 | 1.483382e-49 | -8.615850e-47 |
| Msa0081090 | Msa1004800 | 0.804852 | 1.770315e-49 | -8.615850e-47 |
| Msa0081090 | Msa1004840 | 0.810560 | 1.084775e-50 | -8.615850e-47 |
| Msa0081090 | Msa1020670 | 0.839381 | 1.639765e-57 | -8.615850e-47 |
| Msa0081090 | Msa1029250 | 0.817069 | 3.991911e-52 | -8.615850e-47 |
| Msa0081090 | Msa1041670 | 0.807748 | 4.344516e-50 | -8.615850e-47 |
| Msa0081090 | Msa1044680 | 0.816699 | 4.834381e-52 | -8.615850e-47 |
| Msa0081090 | Msa1045140 | 0.818729 | 1.683428e-52 | -8.615850e-47 |
| Msa0081090 | Msa1050340 | 0.800233 | 1.586918e-48 | -8.615850e-47 |
| Msa0081090 | Msa1051830 | 0.811962 | 5.383461e-51 | -8.615850e-47 |
| Msa0081090 | Msa1084960 | 0.816485 | 5.398930e-52 | -8.615850e-47 |
| Msa0081090 | Msa1085200 | 0.805463 | 1.318852e-49 | -8.615850e-47 |
| Msa0081090 | Msa1096960 | 0.814947 | 1.188562e-51 | -8.615850e-47 |
| Msa0081090 | Msa1101090 | 0.814889 | 1.224252e-51 | -8.615850e-47 |
| Msa0081090 | Msa1103990 | 0.837505 | 4.995310e-57 | -8.615850e-47 |
| Msa0081090 | Msa1111130 | 0.806059 | 9.885962e-50 | -8.615850e-47 |
| Msa0081090 | Msa1113340 | 0.811959 | 5.392102e-51 | -8.615850e-47 |
| Msa0081090 | Msa1123380 | 0.818376 | 2.024882e-52 | -8.615850e-47 |
| Msa0081090 | Msa1124020 | 0.811900 | 5.555826e-51 | -8.615850e-47 |
| Msa0081090 | Msa1128600 | 0.818685 | 1.723130e-52 | -8.615850e-47 |
| Msa0081090 | Msa1132840 | 0.862378 | 5.287123e-64 | -8.615850e-47 |
| Msa0081090 | Msa1140210 | 0.808636 | 2.810012e-50 | -8.615850e-47 |
| Msa0081090 | Msa1140220 | 0.811226 | 7.782261e-51 | -8.615850e-47 |
| Msa0081090 | Msa1145810 | 0.815452 | 9.179545e-52 | -8.615850e-47 |
| Msa0081090 | Msa1155170 | -0.831733 | 1.412196e-55 | -8.615850e-47 |
| Msa0081090 | Msa1166560 | 0.808265 | 3.371144e-50 | -8.615850e-47 |
| Msa0081090 | Msa1171710 | 0.805714 | 1.168436e-49 | -8.615850e-47 |
| Msa0081090 | Msa1186020 | 0.831226 | 1.882666e-55 | -8.615850e-47 |
| Msa0081090 | Msa1189070 | 0.815898 | 7.300525e-52 | -8.615850e-47 |
| Msa0081090 | Msa1193170 | 0.801391 | 9.205615e-49 | -8.615850e-47 |
| Msa0081090 | Msa1199570 | 0.846145 | 2.610718e-59 | -8.615850e-47 |
| Msa0081090 | Msa1205280 | 0.807864 | 4.103888e-50 | -8.615850e-47 |
| Msa0081090 | Msa1206460 | 0.805666 | 1.195786e-49 | -8.615850e-47 |
| Msa0081090 | Msa1208950 | 0.820989 | 5.124798e-53 | -8.615850e-47 |
| Msa0081090 | Msa1209460 | 0.816221 | 6.184331e-52 | -8.615850e-47 |
| Msa0081090 | Msa1219000 | 0.805319 | 1.413978e-49 | -8.615850e-47 |
| Msa0081090 | Msa1225860 | -0.810272 | 1.251989e-50 | -8.615850e-47 |
| Msa0081090 | Msa1228200 | 0.855675 | 5.380560e-62 | -8.615850e-47 |
| Msa0081090 | Msa1229500 | 0.840444 | 8.663467e-58 | -8.615850e-47 |
| Msa0081090 | Msa1243490 | 0.803666 | 3.125811e-49 | -8.615850e-47 |
| Msa0081090 | Msa1265650 | 0.812012 | 5.250628e-51 | -8.615850e-47 |
| Msa0081090 | Msa1269480 | 0.802007 | 6.881042e-49 | -8.615850e-47 |
| Msa0081090 | Msa1271990 | 0.804679 | 1.924165e-49 | -8.615850e-47 |
| Msa0081090 | Msa1276660 | 0.803913 | 2.778614e-49 | -8.615850e-47 |
| Msa0081090 | Msa1282260 | 0.805036 | 1.620355e-49 | -8.615850e-47 |
| Msa0081090 | Msa1297230 | 0.837907 | 3.940714e-57 | -8.615850e-47 |
| Msa0081090 | Msa1298220 | 0.813440 | 2.556437e-51 | -8.615850e-47 |
| Msa0081090 | Msa1298820 | 0.816299 | 5.941308e-52 | -8.615850e-47 |
| Msa0081090 | Msa1303560 | 0.829634 | 4.612770e-55 | -8.615850e-47 |
| Msa0081090 | Msa1303650 | 0.831116 | 2.003181e-55 | -8.615850e-47 |
| Msa0081090 | Msa1309030 | 0.805969 | 1.032604e-49 | -8.615850e-47 |
| Msa0081090 | Msa1314650 | 0.813591 | 2.368383e-51 | -8.615850e-47 |
| Msa0081090 | Msa1320670 | 0.801327 | 9.486321e-49 | -8.615850e-47 |
| Msa0081090 | Msa1324080 | 0.824182 | 9.272957e-54 | -8.615850e-47 |
| Msa0081090 | Msa1328640 | 0.819944 | 8.899550e-53 | -8.615850e-47 |
| Msa0081090 | Msa1328710 | 0.849966 | 2.302810e-60 | -8.615850e-47 |
| Msa0081090 | Msa1330410 | 0.800584 | 1.346085e-48 | -8.615850e-47 |
| Msa0081090 | Msa1332760 | 0.812009 | 5.258976e-51 | -8.615850e-47 |
| Msa0081090 | Msa1333480 | 0.835082 | 2.063329e-56 | -8.615850e-47 |
| Msa0081090 | Msa1347310 | 0.807484 | 4.941210e-50 | -8.615850e-47 |
| Msa0081090 | Msa1356830 | 0.804913 | 1.719586e-49 | -8.615850e-47 |
| Msa0081090 | Msa1366600 | 0.801910 | 7.203276e-49 | -8.615850e-47 |
| Msa0081090 | Msa1369150 | 0.808343 | 3.244366e-50 | -8.615850e-47 |
| Msa0081090 | Msa1372230 | 0.830659 | 2.592390e-55 | -8.615850e-47 |
| Msa0081090 | Msa1382620 | 0.808268 | 3.366979e-50 | -8.615850e-47 |
| Msa0081090 | Msa1390440 | 0.823022 | 1.731892e-53 | -8.615850e-47 |
| Msa0081090 | Msa1397400 | 0.810061 | 1.390080e-50 | -8.615850e-47 |
| Msa0081090 | Msa1398340 | 0.811211 | 7.841227e-51 | -8.615850e-47 |
| Msa0081090 | Msa1402400 | 0.808381 | 3.184724e-50 | -8.615850e-47 |
| Msa0081090 | Msa1425880 | 0.814415 | 1.558576e-51 | -8.615850e-47 |
| Msa0081090 | Msa1433810 | 0.811732 | 6.043561e-51 | -8.615850e-47 |
| Msa0081090 | Msa1437180 | 0.812969 | 3.243963e-51 | -8.615850e-47 |
| Msa0081090 | Msa1440960 | 0.825982 | 3.482503e-54 | -8.615850e-47 |
| Msa0081090 | Msa1451160 | 0.817744 | 2.813030e-52 | -8.615850e-47 |
| Msa0081090 | Msa1454140 | 0.811842 | 5.718311e-51 | -8.615850e-47 |
| Msa0081090 | Msa1460020 | 0.806411 | 8.332789e-50 | -8.615850e-47 |
| Msa0081090 | Msa1464810 | 0.810986 | 8.775031e-51 | -8.615850e-47 |
| Msa0081090 | Msa1465440 | 0.805882 | 1.076943e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081090 | MtrunA17_Chr1g0193431 | 91.379 | 754 | 44 | 3 | 1 | 752 | 1 | 735 | 0.0 | 1405 |
| Msa0081090 | MtrunA17_Chr1g0209631 | 32.072 | 502 | 324 | 8 | 242 | 727 | 269 | 769 | 6.69e-68 | 239 |
| Msa0081090 | MtrunA17_Chr8g0337411 | 26.457 | 223 | 133 | 7 | 244 | 445 | 55 | 267 | 1.68e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081090 | AT5G26710.1 | 69.179 | 743 | 193 | 8 | 8 | 746 | 6 | 716 | 0.0 | 1059 |
| Msa0081090 | AT1G25350.1 | 31.349 | 504 | 326 | 9 | 242 | 727 | 269 | 770 | 4.94e-65 | 231 |
| Msa0081090 | AT1G25350.2 | 29.586 | 507 | 336 | 9 | 242 | 727 | 269 | 775 | 1.87e-56 | 207 |
Find 201 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATTATAAATTTACTATTT+TGG | 0.058330 | 1_2:-59613741 | Msa0081090:five_prime_UTR |
| CTTATAAGCAACCTTGTATT+TGG | 0.081771 | 1_2:-59608626 | Msa0081090:three_prime_UTR |
| TGAATGACAAGTTGGTAATT+TGG | 0.186865 | 1_2:-59608698 | Msa0081090:three_prime_UTR |
| GGCAAGCTTCTAAATCATTT+TGG | 0.193516 | 1_2:+59613345 | None:intergenic |
| CTTCTATGGTTTGTCCAAAA+TGG | 0.200426 | 1_2:-59610605 | Msa0081090:CDS |
| AACAAATGCTCCACGAAATT+TGG | 0.200717 | 1_2:+59613415 | None:intergenic |
| TTGACGACTGGCTGGTCTTT+TGG | 0.223662 | 1_2:+59611448 | None:intergenic |
| ATACTTGTTCAACAATAAAT+TGG | 0.225280 | 1_2:+59610501 | None:intergenic |
| TTGAGGAGAATTTGAAATTA+TGG | 0.240284 | 1_2:-59610970 | Msa0081090:CDS |
| CTTCTCTACTTCCTTTACTA+TGG | 0.253996 | 1_2:+59610016 | None:intergenic |
| TCTTCTATTTCTCTATTCTT+TGG | 0.257851 | 1_2:-59611712 | Msa0081090:intron |
| CAATCGCAGATCTAGCTATC+TGG | 0.266430 | 1_2:-59612054 | Msa0081090:CDS |
| TGGAGAGAATCCGGCGAGTT+TGG | 0.288324 | 1_2:+59613569 | None:intergenic |
| GGATGTTTCTGATAACATTA+AGG | 0.292494 | 1_2:-59611401 | Msa0081090:CDS |
| GTCAATAATCTTCTTATTGA+TGG | 0.298193 | 1_2:+59610262 | None:intergenic |
| TTACCTCATTACGAAGAAAA+AGG | 0.308169 | 1_2:-59609862 | Msa0081090:intron |
| TCAGCAAACGAAAGCTTCTA+TGG | 0.315812 | 1_2:-59610619 | Msa0081090:CDS |
| GCTATCTGGGCAGGTCTTGC+AGG | 0.316994 | 1_2:-59612040 | Msa0081090:intron |
| CGAATTTAGCCGGTTGAATA+TGG | 0.317857 | 1_2:-59610654 | Msa0081090:CDS |
| CCAATGCCTCATCATAGAAT+TGG | 0.320420 | 1_2:-59610836 | Msa0081090:CDS |
| AGAAATGTGGGGACGGAATC+AGG | 0.323152 | 1_2:+59613525 | None:intergenic |
| AGATTACTTCCCTGAGTTGA+TGG | 0.323642 | 1_2:-59611107 | Msa0081090:CDS |
| GCAACCCTTCCTAATTTCTA+TGG | 0.324310 | 1_2:-59613368 | Msa0081090:CDS |
| TGGAGAGAAAGGGATATTTC+AGG | 0.324909 | 1_2:-59608821 | Msa0081090:CDS |
| ACGCTTAAGATTTCGCATAT+TGG | 0.327208 | 1_2:+59608860 | None:intergenic |
| CGCAATGACAGCAGTGTGTC+TGG | 0.330957 | 1_2:+59610229 | None:intergenic |
| GATGTCTGCTGCCTGCCATC+TGG | 0.343011 | 1_2:+59608747 | None:intergenic |
| ATCGTAATGCTCAGTATTAC+AGG | 0.345722 | 1_2:-59610715 | Msa0081090:CDS |
| TAACCAACTTCTTATTATTA+CGG | 0.346651 | 1_2:+59613715 | None:intergenic |
| TGAAGATAGCCACTGGGTTC+AGG | 0.349425 | 1_2:+59611307 | None:intergenic |
| TCAAATTCTCCTCAACACTA+TGG | 0.354098 | 1_2:+59610978 | None:intergenic |
| AAGCTACCACATATACAAAA+AGG | 0.360107 | 1_2:-59610112 | Msa0081090:CDS |
| TTATAAGCAACCTTGTATTT+GGG | 0.373335 | 1_2:-59608625 | Msa0081090:three_prime_UTR |
| ATTAGTTAGCCTGACATTGA+TGG | 0.381393 | 1_2:-59609892 | Msa0081090:CDS |
| GCCGCCGCGCCACCGTTAGC+GGG | 0.385971 | 1_2:-59613603 | Msa0081090:CDS |
| GAAGTCACAGCAACATATAT+TGG | 0.387411 | 1_2:-59611505 | Msa0081090:CDS |
| CGCTAACGGTGGCGCGGCGG+CGG | 0.401265 | 1_2:+59613605 | None:intergenic |
| TCATGGAATGGGACAAGCTC+TGG | 0.411380 | 1_2:-59610286 | Msa0081090:CDS |
| CGCCGCCGCGCCACCGTTAG+CGG | 0.413693 | 1_2:-59613604 | Msa0081090:CDS |
| GGAAGGGAGGTGTCGATGGA+TGG | 0.416190 | 1_2:+59613549 | None:intergenic |
| GGAAGTAACCTTGATGGATT+GGG | 0.417880 | 1_2:-59610045 | Msa0081090:CDS |
| ATAAAAGATGTTGAGACGTT+GGG | 0.418362 | 1_2:-59611160 | Msa0081090:CDS |
| AGTATTGCAGCTGGAGAGAA+AGG | 0.419290 | 1_2:-59608832 | Msa0081090:CDS |
| AGTTGGATACACTTTATACT+TGG | 0.420137 | 1_2:+59610811 | None:intergenic |
| CGGTGGCGCGGCGGCGGAGA+AGG | 0.420664 | 1_2:+59613611 | None:intergenic |
| CCACATTTCTCTTGTCCAAC+GGG | 0.422646 | 1_2:-59613512 | Msa0081090:intron |
| GATAAAGTAAAGAATGTGAA+TGG | 0.423094 | 1_2:-59611424 | Msa0081090:CDS |
| ACACGATTGGTTTCGAAGGC+CGG | 0.426191 | 1_2:+59608781 | None:intergenic |
| GGATCACGGAGTGATTTGTT+TGG | 0.426882 | 1_2:+59610878 | None:intergenic |
| GATGTTTCTGATAACATTAA+GGG | 0.428888 | 1_2:-59611400 | Msa0081090:CDS |
| AATTCATTACTTTCTTTAGC+AGG | 0.435143 | 1_2:+59611196 | None:intergenic |
| AAAATGGAAAAGTTGAATCA+TGG | 0.436219 | 1_2:-59610589 | Msa0081090:CDS |
| AATAGTAAATTTATAATGTC+AGG | 0.438869 | 1_2:+59613745 | None:intergenic |
| AGGAAGTAACCTTGATGGAT+TGG | 0.439791 | 1_2:-59610046 | Msa0081090:CDS |
| ACCCTTTGACATTCCCAACT+TGG | 0.441244 | 1_2:+59609991 | None:intergenic |
| GGTAATTTGGATAGCTATTG+TGG | 0.450186 | 1_2:-59608685 | Msa0081090:three_prime_UTR |
| GATCTTCCAGCTGCTGAAGT+TGG | 0.450726 | 1_2:-59611352 | Msa0081090:CDS |
| AAATGATTTAGAAGCTTGCC+AGG | 0.451118 | 1_2:-59613342 | Msa0081090:intron |
| CCACAAAACTGAAGCTCACT+TGG | 0.452027 | 1_2:-59609932 | Msa0081090:CDS |
| CTTCCCTGAGTTGATGGAAC+TGG | 0.453446 | 1_2:-59611101 | Msa0081090:CDS |
| TTATGGAAGGAAATGATTGC+AGG | 0.457763 | 1_2:-59610953 | Msa0081090:CDS |
| AATGCCCTGAGGGCACTGTT+TGG | 0.458237 | 1_2:+59608516 | None:intergenic |
| GTCGATGGATGGAGAGAATC+CGG | 0.460388 | 1_2:+59613560 | None:intergenic |
| ATAAAGTAAAGAATGTGAAT+GGG | 0.460399 | 1_2:-59611423 | Msa0081090:CDS |
| AAATCTCAATCTCATGGAAT+GGG | 0.463289 | 1_2:-59610297 | Msa0081090:CDS |
| GGATTGCAACGATAATAAAC+AGG | 0.467261 | 1_2:+59610857 | None:intergenic |
| CAAGTATATTGATGACTACT+TGG | 0.468006 | 1_2:-59612110 | Msa0081090:CDS |
| GATAAAAGATGTTGAGACGT+TGG | 0.468506 | 1_2:-59611161 | Msa0081090:CDS |
| GCAGTGTGTCTGGGACATAC+AGG | 0.469189 | 1_2:+59610239 | None:intergenic |
| AAGTAGAGAAGGACCAAGTT+GGG | 0.469950 | 1_2:-59610004 | Msa0081090:CDS |
| CAATGCCTCATCATAGAATT+GGG | 0.472137 | 1_2:-59610835 | Msa0081090:CDS |
| AAAATCTCAATCTCATGGAA+TGG | 0.472161 | 1_2:-59610298 | Msa0081090:CDS |
| TAAAGAAAGTAATGAATTTG+TGG | 0.474527 | 1_2:-59611191 | Msa0081090:CDS |
| TTCTCATCTACGAATTTAGC+CGG | 0.482987 | 1_2:-59610664 | Msa0081090:CDS |
| GGACAAGCAAAATCATAAGT+TGG | 0.483435 | 1_2:+59610794 | None:intergenic |
| ATGTCTGCTGCCTGCCATCT+GGG | 0.485977 | 1_2:+59608748 | None:intergenic |
| GAACAAAGCGACGACGAAGA+TGG | 0.486973 | 1_2:-59613655 | Msa0081090:exon |
| ACAAATGCAAAAGGAGAGAA+TGG | 0.487392 | 1_2:-59611026 | Msa0081090:CDS |
| GCGCGGCGGCGGAGAAGGAA+AGG | 0.489164 | 1_2:+59613616 | None:intergenic |
| CCCACATTTCTCTTGTCCAA+CGG | 0.491225 | 1_2:-59613513 | Msa0081090:CDS |
| GAATGCCAAACAGTGCCCTC+AGG | 0.492151 | 1_2:-59608521 | Msa0081090:three_prime_UTR |
| CTTTGTTTGCAGCTTGAGGA+AGG | 0.496246 | 1_2:-59608945 | Msa0081090:intron |
| TGCTGAACGATACCAAGGTC+AGG | 0.500013 | 1_2:-59611245 | Msa0081090:CDS |
| TATGCACCTGTACTCTCATC+AGG | 0.500252 | 1_2:-59612154 | Msa0081090:CDS |
| CGCAACAGGTCCAAATTTCG+TGG | 0.502464 | 1_2:-59613425 | Msa0081090:intron |
| TCCAATGTGAAGATAGCCAC+TGG | 0.503003 | 1_2:+59611300 | None:intergenic |
| GAGTGTAGACCATATTCAAC+CGG | 0.504461 | 1_2:+59610645 | None:intergenic |
| AATACTGAGCATTACGATCA+TGG | 0.505401 | 1_2:+59610720 | None:intergenic |
| GGGATTGCAAATAACACGAT+TGG | 0.508386 | 1_2:+59608768 | None:intergenic |
| CCTTCATGAGCATCAACAAA+TGG | 0.508448 | 1_2:+59610773 | None:intergenic |
| ATGCGGACAAATGATTTCTC+AGG | 0.508905 | 1_2:+59610173 | None:intergenic |
| TTTCAGGTGCTGGAAAGAGA+TGG | 0.510988 | 1_2:-59611611 | Msa0081090:intron |
| AATCAAACTCCATCAATGTC+AGG | 0.511094 | 1_2:+59609883 | None:intergenic |
| TCAGCCAGTTCCATCAACTC+AGG | 0.512208 | 1_2:+59611097 | None:intergenic |
| AAATGGAAAAGTTGAATCAT+GGG | 0.512472 | 1_2:-59610588 | Msa0081090:CDS |
| CTTTATCCTTGACGACTGGC+TGG | 0.513178 | 1_2:+59611440 | None:intergenic |
| GACGGAATCAGGAGGAAGGG+AGG | 0.514373 | 1_2:+59613536 | None:intergenic |
| AAAATTAATTAGCCAGGGTA+AGG | 0.515011 | 1_2:-59611074 | Msa0081090:CDS |
| GCTTTGTTCACTGTGCTGCT+AGG | 0.515150 | 1_2:+59613669 | None:intergenic |
| CCAATTCTATGATGAGGCAT+TGG | 0.515257 | 1_2:+59610836 | None:intergenic |
| GGCATTTCCCCAATCCATCA+AGG | 0.517350 | 1_2:+59610037 | None:intergenic |
| GAAGTAGAGAAGGACCAAGT+TGG | 0.517434 | 1_2:-59610005 | Msa0081090:CDS |
| GGAGAATTTGAAATTATGGA+AGG | 0.519163 | 1_2:-59610966 | Msa0081090:CDS |
| TCCACGTGAACAAATGCAAA+AGG | 0.523875 | 1_2:-59611035 | Msa0081090:CDS |
| GGACCGTAATAATAAGAAGT+TGG | 0.525934 | 1_2:-59613718 | Msa0081090:five_prime_UTR |
| AAGGTATCACTCATGCCCTT+CGG | 0.526418 | 1_2:-59610754 | Msa0081090:CDS |
| AATCGCAGATCTAGCTATCT+GGG | 0.526585 | 1_2:-59612053 | Msa0081090:CDS |
| TTCAGGTGCTGGAAAGAGAT+GGG | 0.528173 | 1_2:-59611610 | Msa0081090:intron |
| GGTGTGATGTACCCTTCGTC+CGG | 0.530625 | 1_2:-59608800 | Msa0081090:CDS |
| CCATTTGTTGATGCTCATGA+AGG | 0.530665 | 1_2:-59610773 | Msa0081090:CDS |
| GACGCAGAGTCTGTATCAGC+AGG | 0.532308 | 1_2:-59610071 | Msa0081090:CDS |
| TTTACTTTATCCTTGACGAC+TGG | 0.533066 | 1_2:+59611436 | None:intergenic |
| TGGGGACGGAATCAGGAGGA+AGG | 0.533685 | 1_2:+59613532 | None:intergenic |
| CATAGTAAAGGAAGTAGAGA+AGG | 0.535865 | 1_2:-59610015 | Msa0081090:CDS |
| GCGTGGAGAAGTATTGCAGC+TGG | 0.537955 | 1_2:-59608841 | Msa0081090:CDS |
| GGGAATGTCAAAGGGTTAAG+TGG | 0.540065 | 1_2:-59609984 | Msa0081090:CDS |
| TTACAGGATTCAAGCGGACA+TGG | 0.540764 | 1_2:-59610699 | Msa0081090:CDS |
| TCTGATAACATTAAGGGAGG+AGG | 0.541928 | 1_2:-59611394 | Msa0081090:CDS |
| CAGCCAGTTCCATCAACTCA+GGG | 0.544119 | 1_2:+59611098 | None:intergenic |
| AGGAGGAAGGGAGGTGTCGA+TGG | 0.549519 | 1_2:+59613545 | None:intergenic |
| ACCAAGTTGGGAATGTCAAA+GGG | 0.551117 | 1_2:-59609992 | Msa0081090:CDS |
| AGGTGAGGAAGTAACCTTGA+TGG | 0.551874 | 1_2:-59610051 | Msa0081090:CDS |
| GATGCGGCGATCCCCGCTAA+CGG | 0.552578 | 1_2:+59613591 | None:intergenic |
| TATTTGCAATCCCAGATGGC+AGG | 0.556570 | 1_2:-59608758 | Msa0081090:CDS |
| GACCAAGTTGGGAATGTCAA+AGG | 0.556775 | 1_2:-59609993 | Msa0081090:CDS |
| CGCGGCGGCGGAGAAGGAAA+GGG | 0.557658 | 1_2:+59613617 | None:intergenic |
| GTGTTATTTGCAATCCCAGA+TGG | 0.560737 | 1_2:-59608762 | Msa0081090:CDS |
| CCCCGCTAACGGTGGCGCGG+CGG | 0.562116 | 1_2:+59613602 | None:intergenic |
| ATGCAAAAGGAGAGAATGGA+TGG | 0.562327 | 1_2:-59611022 | Msa0081090:CDS |
| TAAGGGAGGAGGCAAGCCTT+CGG | 0.564581 | 1_2:-59611383 | Msa0081090:CDS |
| GGTTTGCAGTGTTGTGTCCG+TGG | 0.564738 | 1_2:-59610920 | Msa0081090:CDS |
| CGCACAATTCCTTGCACTGT+AGG | 0.569571 | 1_2:+59610551 | None:intergenic |
| GCAGATCTAGCTATCTGGGC+AGG | 0.571047 | 1_2:-59612049 | Msa0081090:CDS |
| GAATCCGGCGAGTTTGGATG+CGG | 0.575025 | 1_2:+59613575 | None:intergenic |
| CTAACTAATTCATCTAACTC+AGG | 0.576697 | 1_2:+59609906 | None:intergenic |
| TTTGGCCATAGAAATTAGGA+AGG | 0.578574 | 1_2:+59613363 | None:intergenic |
| TTGGGGAAATGCCATAGTAA+AGG | 0.578640 | 1_2:-59610027 | Msa0081090:CDS |
| GCAGGGCCTGATGAGAGTAC+AGG | 0.580273 | 1_2:+59612148 | None:intergenic |
| CCGTTGGACAAGAGAAATGT+GGG | 0.580974 | 1_2:+59613513 | None:intergenic |
| CCACGATTTCCTACAGTGCA+AGG | 0.583620 | 1_2:-59610560 | Msa0081090:CDS |
| GTGTTGTGTCCGTGGGAAGT+TGG | 0.586102 | 1_2:-59610912 | Msa0081090:CDS |
| GTTTGCAGTGTTGTGTCCGT+GGG | 0.587122 | 1_2:-59610919 | Msa0081090:CDS |
| TAAGCATAACACTGAAGTGA+TGG | 0.589894 | 1_2:+59608645 | None:intergenic |
| GGTTTCGAAGGCCGGACGAA+GGG | 0.590280 | 1_2:+59608789 | None:intergenic |
| AATGCCAAACAGTGCCCTCA+GGG | 0.591751 | 1_2:-59608520 | Msa0081090:three_prime_UTR |
| ATGGTATTCACTTGACCGAA+GGG | 0.592206 | 1_2:+59610739 | None:intergenic |
| CCTTGCACTGTAGGAAATCG+TGG | 0.592445 | 1_2:+59610560 | None:intergenic |
| AACGCAAAATAACCTGACCT+TGG | 0.594893 | 1_2:+59611233 | None:intergenic |
| AGAGTCTGTATCAGCAGGTG+AGG | 0.595755 | 1_2:-59610066 | Msa0081090:CDS |
| GCGGCGATCCCCGCTAACGG+TGG | 0.596574 | 1_2:+59613594 | None:intergenic |
| TTTGCAGCTTGAGGAAGGAG+AGG | 0.597573 | 1_2:-59608940 | Msa0081090:intron |
| CCCGTTGGACAAGAGAAATG+TGG | 0.597812 | 1_2:+59613512 | None:intergenic |
| CCGCCGCGCCACCGTTAGCG+GGG | 0.597972 | 1_2:-59613602 | Msa0081090:CDS |
| TAAAAGATGTTGAGACGTTG+GGG | 0.598165 | 1_2:-59611159 | Msa0081090:CDS |
| AATAACACGATTGGTTTCGA+AGG | 0.600160 | 1_2:+59608777 | None:intergenic |
| GCAATGACAGCAGTGTGTCT+GGG | 0.600339 | 1_2:+59610230 | None:intergenic |
| CCCAGTGGCTATCTTCACAT+TGG | 0.601813 | 1_2:-59611301 | Msa0081090:CDS |
| GAAAGAGATGGGAAAGCTTG+AGG | 0.602516 | 1_2:-59611599 | Msa0081090:CDS |
| CATTTGTCCGCATCATACCT+AGG | 0.604356 | 1_2:-59610163 | Msa0081090:CDS |
| TACAGGATTCAAGCGGACAT+GGG | 0.604672 | 1_2:-59610698 | Msa0081090:CDS |
| TAAAGTAAAGAATGTGAATG+GGG | 0.604831 | 1_2:-59611422 | Msa0081090:CDS |
| AATGATTGCAGGATCAGAGA+GGG | 0.606663 | 1_2:-59610942 | Msa0081090:CDS |
| TTTGTTCTTCTGCGTCACAT+TGG | 0.608203 | 1_2:-59613398 | Msa0081090:CDS |
| TAGTCGAGAACCCAAATACA+AGG | 0.610394 | 1_2:+59608615 | None:intergenic |
| AAAAGACCAGCCAGTCGTCA+AGG | 0.611058 | 1_2:-59611446 | Msa0081090:CDS |
| ATGCAGAAACCATAGTGTTG+AGG | 0.612137 | 1_2:-59610987 | Msa0081090:CDS |
| TTGCTTAATCAATGCCCTGA+GGG | 0.612270 | 1_2:+59608506 | None:intergenic |
| ATCGCCGCATCCAAACTCGC+CGG | 0.613745 | 1_2:-59613579 | Msa0081090:CDS |
| CATGGTATTCACTTGACCGA+AGG | 0.616177 | 1_2:+59610738 | None:intergenic |
| CAGTGTGTCTGGGACATACA+GGG | 0.618476 | 1_2:+59610240 | None:intergenic |
| GTATTGCAGCTGGAGAGAAA+GGG | 0.620537 | 1_2:-59608831 | Msa0081090:CDS |
| GGACAAGAGAAATGTGGGGA+CGG | 0.620645 | 1_2:+59613518 | None:intergenic |
| GATCCCCGCTAACGGTGGCG+CGG | 0.624387 | 1_2:+59613599 | None:intergenic |
| CGGTTTGCACCTGAACCCAG+TGG | 0.631994 | 1_2:-59611316 | Msa0081090:CDS |
| TGGTTTCGAAGGCCGGACGA+AGG | 0.632020 | 1_2:+59608788 | None:intergenic |
| TTGGACCCAATTCTATGATG+AGG | 0.632796 | 1_2:+59610830 | None:intergenic |
| GTATTGTTAACCCTCACTGA+TGG | 0.633663 | 1_2:-59610197 | Msa0081090:CDS |
| GGGGACGGAATCAGGAGGAA+GGG | 0.638859 | 1_2:+59613533 | None:intergenic |
| AATTCAATAGTTGCAGAACA+TGG | 0.639406 | 1_2:-59611540 | Msa0081090:CDS |
| GTTTCTGATAACATTAAGGG+AGG | 0.642874 | 1_2:-59611397 | Msa0081090:CDS |
| TTGGCCATAGAAATTAGGAA+GGG | 0.643057 | 1_2:+59613364 | None:intergenic |
| CAGACACACTGCTGTCATTG+CGG | 0.643126 | 1_2:-59610228 | Msa0081090:CDS |
| CCAATGTGAAGATAGCCACT+GGG | 0.643680 | 1_2:+59611301 | None:intergenic |
| AAGTTGGAAAAGTTCGCTTG+CGG | 0.645603 | 1_2:-59611336 | Msa0081090:CDS |
| CATCAACATACGCCTTACCC+TGG | 0.646586 | 1_2:+59611062 | None:intergenic |
| AATATGCGAAATCTTAAGCG+TGG | 0.647165 | 1_2:-59608858 | Msa0081090:CDS |
| CTTGCATATCCAACTTCCCA+CGG | 0.647797 | 1_2:+59610903 | None:intergenic |
| AACGATAATAAACAGGATCA+CGG | 0.648773 | 1_2:+59610864 | None:intergenic |
| TTTCTCAGGACCATCAGTGA+GGG | 0.655675 | 1_2:+59610187 | None:intergenic |
| GGAAGATCTATCTCTGCCGA+AGG | 0.658068 | 1_2:+59611367 | None:intergenic |
| GAAGTAACCTTGATGGATTG+GGG | 0.667338 | 1_2:-59610044 | Msa0081090:CDS |
| GTGCAAGGAATTGTGCGTAG+AGG | 0.676449 | 1_2:-59610545 | Msa0081090:CDS |
| ATGATTGCAGGATCAGAGAG+GGG | 0.677471 | 1_2:-59610941 | Msa0081090:CDS |
| ATTTCTCAGGACCATCAGTG+AGG | 0.679162 | 1_2:+59610186 | None:intergenic |
| AATATCAAAATCTTGCACGA+TGG | 0.684460 | 1_2:-59611566 | Msa0081090:CDS |
| GTTGCTTAATCAATGCCCTG+AGG | 0.687335 | 1_2:+59608505 | None:intergenic |
| AAATGATTGCAGGATCAGAG+AGG | 0.689429 | 1_2:-59610943 | Msa0081090:CDS |
| TCAGTATTACAGGATTCAAG+CGG | 0.711357 | 1_2:-59610705 | Msa0081090:CDS |
| AATGTGGGGACGGAATCAGG+AGG | 0.727109 | 1_2:+59613528 | None:intergenic |
| AAAAGATGTTGAGACGTTGG+GGG | 0.753350 | 1_2:-59611158 | Msa0081090:CDS |
| CGTTGGACAAGAGAAATGTG+GGG | 0.758677 | 1_2:+59613514 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTATAAATTTACTATTT+TGG | - | chr1_2:59608442-59608461 | Msa0081090:three_prime_UTR | 10.0% |
| !!! | CATTATAAATTTACTATTTT+GGG | - | chr1_2:59608443-59608462 | Msa0081090:three_prime_UTR | 10.0% |
| !!! | ATTATAAATTTACTATTTTG+GGG | - | chr1_2:59608444-59608463 | Msa0081090:three_prime_UTR | 10.0% |
| !! | ATAAATTCTTATAACATATA+TGG | + | chr1_2:59612874-59612893 | None:intergenic | 10.0% |
| !!! | TAAAAAAAAGTTACTTATTT+TGG | + | chr1_2:59613703-59613722 | None:intergenic | 10.0% |
| !! | AATAGTAAATTTATAATGTC+AGG | + | chr1_2:59608441-59608460 | None:intergenic | 15.0% |
| !! | AAAAATCAATTAAGATTACA+GGG | + | chr1_2:59609278-59609297 | None:intergenic | 15.0% |
| !! | AAAAAATCAATTAAGATTAC+AGG | + | chr1_2:59609279-59609298 | None:intergenic | 15.0% |
| !! | CTATGAAAAAAAAATAGTTT+AGG | + | chr1_2:59609445-59609464 | None:intergenic | 15.0% |
| !! | TTTCAAATAAAAATGAGATA+AGG | + | chr1_2:59613065-59613084 | None:intergenic | 15.0% |
| !! | TAACCAACTTCTTATTATTA+CGG | + | chr1_2:59608471-59608490 | None:intergenic | 20.0% |
| !!! | GTCAAATTAAAGATTTTTAG+TGG | - | chr1_2:59608876-59608895 | Msa0081090:CDS | 20.0% |
| !!! | GATAGAGTTTTTAATTGTTA+AGG | - | chr1_2:59608937-59608956 | Msa0081090:intron | 20.0% |
| !!! | TACTCGTTCTATTTTTTTTT+GGG | + | chr1_2:59609048-59609067 | None:intergenic | 20.0% |
| !!! | TCATTATCTTTTTTACCAAA+CGG | - | chr1_2:59609417-59609436 | Msa0081090:intron | 20.0% |
| !!! | TAGTTAACTTGTTTTTGTAT+AGG | - | chr1_2:59609479-59609498 | Msa0081090:intron | 20.0% |
| !! | AACAATAAACAATTGAATGA+CGG | + | chr1_2:59609958-59609977 | None:intergenic | 20.0% |
| !!! | TTTAATTTCATTATAGTCTG+TGG | - | chr1_2:59610425-59610444 | Msa0081090:intron | 20.0% |
| !! | ATAAAGTAAAGAATGTGAAT+GGG | - | chr1_2:59610760-59610779 | Msa0081090:CDS | 20.0% |
| !! | TAAAGAAAGTAATGAATTTG+TGG | - | chr1_2:59610992-59611011 | Msa0081090:CDS | 20.0% |
| !! | ATACTTGTTCAACAATAAAT+TGG | + | chr1_2:59611685-59611704 | None:intergenic | 20.0% |
| !! | ATAAGAAATACAGTAGAATA+TGG | - | chr1_2:59611761-59611780 | Msa0081090:intron | 20.0% |
| !! | AATTGCACTTCATTAATATT+GGG | - | chr1_2:59612458-59612477 | Msa0081090:intron | 20.0% |
| !! | GTAAACACAAAAAATTATAC+AGG | + | chr1_2:59612584-59612603 | None:intergenic | 20.0% |
| !! | AGCAAATATAAACTTAAACA+GGG | + | chr1_2:59613220-59613239 | None:intergenic | 20.0% |
| !! | AAGCAAATATAAACTTAAAC+AGG | + | chr1_2:59613221-59613240 | None:intergenic | 20.0% |
| !!! | TGAATATATTCTGTTTTTTG+TGG | - | chr1_2:59613597-59613616 | Msa0081090:CDS | 20.0% |
| ! | ATTAATAGATCATAGAAACG+AGG | + | chr1_2:59608721-59608740 | None:intergenic | 25.0% |
| ! | TTGTATATATTAAGCTCACA+AGG | + | chr1_2:59608998-59609017 | None:intergenic | 25.0% |
| ! | TTGTGAGCTTAATATATACA+AGG | - | chr1_2:59608997-59609016 | Msa0081090:intron | 25.0% |
| ! | CTTAATATATACAAGGTTCA+GGG | - | chr1_2:59609004-59609023 | Msa0081090:intron | 25.0% |
| !!! | GTACTCGTTCTATTTTTTTT+TGG | + | chr1_2:59609049-59609068 | None:intergenic | 25.0% |
| ! | ATGATAAGCACTTATGTATA+AGG | - | chr1_2:59609074-59609093 | Msa0081090:intron | 25.0% |
| ! | TGATAAGCACTTATGTATAA+GGG | - | chr1_2:59609075-59609094 | Msa0081090:intron | 25.0% |
| ! | TATGTAGTGTTTGGTAAAAT+TGG | + | chr1_2:59609365-59609384 | None:intergenic | 25.0% |
| ! | TTGATTGAATATGTAGTGTT+TGG | + | chr1_2:59609374-59609393 | None:intergenic | 25.0% |
| !! | TATGATATTTCTGTAGTTCA+AGG | + | chr1_2:59609707-59609726 | None:intergenic | 25.0% |
| ! | GTCAATCAATCAATCAATTT+GGG | + | chr1_2:59609801-59609820 | None:intergenic | 25.0% |
| ! | TGTCAATCAATCAATCAATT+TGG | + | chr1_2:59609802-59609821 | None:intergenic | 25.0% |
| ! | TTGATTGATTGATTGACAAT+AGG | - | chr1_2:59609804-59609823 | Msa0081090:intron | 25.0% |
| ! | TTTACTTATTTCCTCTTTCT+TGG | - | chr1_2:59609979-59609998 | Msa0081090:CDS | 25.0% |
| ! | ACAACAATAATCTATTGTTG+TGG | - | chr1_2:59610390-59610409 | Msa0081090:intron | 25.0% |
| !! | TCTTCTATTTCTCTATTCTT+TGG | - | chr1_2:59610471-59610490 | Msa0081090:intron | 25.0% |
| ! | GATAAAGTAAAGAATGTGAA+TGG | - | chr1_2:59610759-59610778 | Msa0081090:CDS | 25.0% |
| ! | TAAAGTAAAGAATGTGAATG+GGG | - | chr1_2:59610761-59610780 | Msa0081090:CDS | 25.0% |
| !! | GATGTTTCTGATAACATTAA+GGG | - | chr1_2:59610783-59610802 | Msa0081090:CDS | 25.0% |
| ! | AATTCATTACTTTCTTTAGC+AGG | + | chr1_2:59610990-59611009 | None:intergenic | 25.0% |
| !! | TTGAGGAGAATTTGAAATTA+TGG | - | chr1_2:59611213-59611232 | Msa0081090:CDS | 25.0% |
| !! | ATGATTCAACTTTTCCATTT+TGG | + | chr1_2:59611595-59611614 | None:intergenic | 25.0% |
| ! | AAAATGGAAAAGTTGAATCA+TGG | - | chr1_2:59611594-59611613 | Msa0081090:CDS | 25.0% |
| ! | AAATGGAAAAGTTGAATCAT+GGG | - | chr1_2:59611595-59611614 | Msa0081090:CDS | 25.0% |
| !! | AGTGATAAACATTTTAAGCA+TGG | + | chr1_2:59611836-59611855 | None:intergenic | 25.0% |
| ! | ATCAAAAAATCTCAATCTCA+TGG | - | chr1_2:59611880-59611899 | Msa0081090:intron | 25.0% |
| ! | GTCAATAATCTTCTTATTGA+TGG | + | chr1_2:59611924-59611943 | None:intergenic | 25.0% |
| !!! | TTTGTTTCTGTCATTAATGA+AGG | - | chr1_2:59612361-59612380 | Msa0081090:intron | 25.0% |
| !! | GTTGATGTATTTCTTTTGAT+TGG | - | chr1_2:59612405-59612424 | Msa0081090:intron | 25.0% |
| ! | GAATTGCACTTCATTAATAT+TGG | - | chr1_2:59612457-59612476 | Msa0081090:intron | 25.0% |
| ! | AAAAAATTATACAGGCCAAA+TGG | + | chr1_2:59612576-59612595 | None:intergenic | 25.0% |
| ! | GGATATTTGTTTATACTGTA+AGG | - | chr1_2:59612825-59612844 | Msa0081090:intron | 25.0% |
| !!! | TTTGTTTTTGAATGACAAGT+TGG | - | chr1_2:59613477-59613496 | Msa0081090:intron | 25.0% |
| ! | TTATAAGCAACCTTGTATTT+GGG | - | chr1_2:59613558-59613577 | Msa0081090:CDS | 25.0% |
| !!! | GTGAACTTGTTATTTTAGTT+TGG | - | chr1_2:59613638-59613657 | Msa0081090:CDS | 25.0% |
| AATTTGCAATTATTCGCAAC+AGG | - | chr1_2:59608744-59608763 | Msa0081090:CDS | 30.0% | |
| !! | TCATTTTGGCCATAGAAATT+AGG | + | chr1_2:59608827-59608846 | None:intergenic | 30.0% |
| TTTGACTAAAACATCTAACC+TGG | + | chr1_2:59608862-59608881 | None:intergenic | 30.0% | |
| TGAATAAGTGATGTTGTCTA+AGG | - | chr1_2:59608915-59608934 | Msa0081090:CDS | 30.0% | |
| TCTATAATAAGCTGCAAACA+TGG | + | chr1_2:59608963-59608982 | None:intergenic | 30.0% | |
| GCTTAATATATACAAGGTTC+AGG | - | chr1_2:59609003-59609022 | Msa0081090:intron | 30.0% | |
| !!! | TCGTTCTATTTTTTTTTGGG+TGG | + | chr1_2:59609045-59609064 | None:intergenic | 30.0% |
| ! | TTGTCTGAAAAAGACTTGTT+TGG | - | chr1_2:59609158-59609177 | Msa0081090:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr1_2:59609508-59609527 | Msa0081090:intron | 30.0% |
| ! | GCTTATTTGAGTTTATCTAC+TGG | + | chr1_2:59609613-59609632 | None:intergenic | 30.0% |
| TATTTACTGCTTGTTTGGAT+TGG | + | chr1_2:59609635-59609654 | None:intergenic | 30.0% | |
| AGCAATATTTACTGCTTGTT+TGG | + | chr1_2:59609640-59609659 | None:intergenic | 30.0% | |
| ATCGAAAATAGTTTCAAGAC+TGG | + | chr1_2:59609731-59609750 | None:intergenic | 30.0% | |
| ! | TATTTTCGATAGTTAGTCCT+TGG | - | chr1_2:59609741-59609760 | Msa0081090:intron | 30.0% |
| TCCTTGGTTTCTTTCAAAAT+AGG | - | chr1_2:59609757-59609776 | Msa0081090:intron | 30.0% | |
| !! | TCCTATTTTGAAAGAAACCA+AGG | + | chr1_2:59609761-59609780 | None:intergenic | 30.0% |
| AATAGGAGAGTGATAGTTTA+AGG | - | chr1_2:59609774-59609793 | Msa0081090:intron | 30.0% | |
| TGATTGATTGACAATAGGTT+AGG | - | chr1_2:59609809-59609828 | Msa0081090:intron | 30.0% | |
| GATTGATTGACAATAGGTTA+GGG | - | chr1_2:59609810-59609829 | Msa0081090:intron | 30.0% | |
| TAGTTCAGTGACAAAATTTG+AGG | - | chr1_2:59609852-59609871 | Msa0081090:intron | 30.0% | |
| AGTTCAGTGACAAAATTTGA+GGG | - | chr1_2:59609853-59609872 | Msa0081090:intron | 30.0% | |
| TTGTTTAGGGATCAAATTGA+AGG | - | chr1_2:59609883-59609902 | Msa0081090:CDS | 30.0% | |
| ! | CAAGTATATTGATGACTACT+TGG | - | chr1_2:59610073-59610092 | Msa0081090:CDS | 30.0% |
| AGGTAAAGTTGAATAGGTAT+AGG | + | chr1_2:59610188-59610207 | None:intergenic | 30.0% | |
| TATCACAGGTAAAGTTGAAT+AGG | + | chr1_2:59610194-59610213 | None:intergenic | 30.0% | |
| ! | TCTTTTAAACATCCTTCCTA+TGG | - | chr1_2:59610227-59610246 | Msa0081090:CDS | 30.0% |
| ! | TGTTTAGTGATTGCATTTTG+TGG | - | chr1_2:59610269-59610288 | Msa0081090:CDS | 30.0% |
| TGCAAGCTATATTCCATATA+AGG | + | chr1_2:59610336-59610355 | None:intergenic | 30.0% | |
| CCATCAAGTTTCATAGATTA+AGG | + | chr1_2:59610523-59610542 | None:intergenic | 30.0% | |
| CCTTAATCTATGAAACTTGA+TGG | - | chr1_2:59610520-59610539 | Msa0081090:CDS | 30.0% | |
| AATATCAAAATCTTGCACGA+TGG | - | chr1_2:59610617-59610636 | Msa0081090:CDS | 30.0% | |
| AATTCAATAGTTGCAGAACA+TGG | - | chr1_2:59610643-59610662 | Msa0081090:CDS | 30.0% | |
| GCAACATATATTGGCAAAAA+AGG | - | chr1_2:59610687-59610706 | Msa0081090:CDS | 30.0% | |
| ATATATTGGCAAAAAAGGAG+TGG | - | chr1_2:59610692-59610711 | Msa0081090:CDS | 30.0% | |
| TATATTGGCAAAAAAGGAGT+GGG | - | chr1_2:59610693-59610712 | Msa0081090:CDS | 30.0% | |
| ! | GGATGTTTCTGATAACATTA+AGG | - | chr1_2:59610782-59610801 | Msa0081090:CDS | 30.0% |
| ATAAAAGATGTTGAGACGTT+GGG | - | chr1_2:59611023-59611042 | Msa0081090:CDS | 30.0% | |
| GCTGAAAAATTAATTAGCCA+GGG | - | chr1_2:59611104-59611123 | Msa0081090:CDS | 30.0% | |
| AAAATTAATTAGCCAGGGTA+AGG | - | chr1_2:59611109-59611128 | Msa0081090:CDS | 30.0% | |
| ! | GGAGAATTTGAAATTATGGA+AGG | - | chr1_2:59611217-59611236 | Msa0081090:CDS | 30.0% |
| AACGATAATAAACAGGATCA+CGG | + | chr1_2:59611322-59611341 | None:intergenic | 30.0% | |
| AGTTGGATACACTTTATACT+TGG | + | chr1_2:59611375-59611394 | None:intergenic | 30.0% | |
| TTGTTGAACAAGTATGTACA+AGG | - | chr1_2:59611690-59611709 | Msa0081090:intron | 30.0% | |
| AAAATCTCAATCTCATGGAA+TGG | - | chr1_2:59611885-59611904 | Msa0081090:intron | 30.0% | |
| AAATCTCAATCTCATGGAAT+GGG | - | chr1_2:59611886-59611905 | Msa0081090:intron | 30.0% | |
| AAGCTACCACATATACAAAA+AGG | - | chr1_2:59612071-59612090 | Msa0081090:CDS | 30.0% | |
| ! | CCATATCCTTTTTGTATATG+TGG | + | chr1_2:59612080-59612099 | None:intergenic | 30.0% |
| CCACATATACAAAAAGGATA+TGG | - | chr1_2:59612077-59612096 | Msa0081090:CDS | 30.0% | |
| CTAACTAATTCATCTAACTC+AGG | + | chr1_2:59612280-59612299 | None:intergenic | 30.0% | |
| TTACCTCATTACGAAGAAAA+AGG | - | chr1_2:59612321-59612340 | Msa0081090:intron | 30.0% | |
| ! | ATACCTTTTTCTTCGTAATG+AGG | + | chr1_2:59612327-59612346 | None:intergenic | 30.0% |
| !! | AAATAAGAAGTGTCTTTCGT+AGG | + | chr1_2:59612519-59612538 | None:intergenic | 30.0% |
| CATTGCATTATCTATCCATT+TGG | - | chr1_2:59612558-59612577 | Msa0081090:intron | 30.0% | |
| !! | GATTAGTTTCTTATCCTTTG+CGG | + | chr1_2:59612646-59612665 | None:intergenic | 30.0% |
| AAATTAAAGCCAAGGCTTAT+TGG | + | chr1_2:59612775-59612794 | None:intergenic | 30.0% | |
| GGACAATAATAAGGACAATA+TGG | + | chr1_2:59612951-59612970 | None:intergenic | 30.0% | |
| !! | TATGCACTTTTAAGAGAATG+GGG | + | chr1_2:59612981-59613000 | None:intergenic | 30.0% |
| !! | GTATGCACTTTTAAGAGAAT+GGG | + | chr1_2:59612982-59613001 | None:intergenic | 30.0% |
| ! | AACCAAAGTGTCTATTCATA+GGG | + | chr1_2:59613146-59613165 | None:intergenic | 30.0% |
| !! | TGAATGACAAGTTGGTAATT+TGG | - | chr1_2:59613485-59613504 | Msa0081090:intron | 30.0% |
| CTTATAAGCAACCTTGTATT+TGG | - | chr1_2:59613557-59613576 | Msa0081090:CDS | 30.0% | |
| GGACCGTAATAATAAGAAGT+TGG | - | chr1_2:59608465-59608484 | Msa0081090:three_prime_UTR | 35.0% | |
| ! | TCAAGACTAGAGTGAGTTTT+CGG | + | chr1_2:59608494-59608513 | None:intergenic | 35.0% |
| ACGAGGAAAAGATATGAGAA+AGG | + | chr1_2:59608704-59608723 | None:intergenic | 35.0% | |
| AACAAATGCTCCACGAAATT+TGG | + | chr1_2:59608771-59608790 | None:intergenic | 35.0% | |
| TTGGCCATAGAAATTAGGAA+GGG | + | chr1_2:59608822-59608841 | None:intergenic | 35.0% | |
| TTTGGCCATAGAAATTAGGA+AGG | + | chr1_2:59608823-59608842 | None:intergenic | 35.0% | |
| ! | GGCAAGCTTCTAAATCATTT+TGG | + | chr1_2:59608841-59608860 | None:intergenic | 35.0% |
| AAATGATTTAGAAGCTTGCC+AGG | - | chr1_2:59608841-59608860 | Msa0081090:CDS | 35.0% | |
| !!! | ATTTTTTTTTGGGTGGTGTC+CGG | + | chr1_2:59609038-59609057 | None:intergenic | 35.0% |
| ATAAGCTTGTGAGAAAGTGA+TGG | + | chr1_2:59609187-59609206 | None:intergenic | 35.0% | |
| !! | GCTATAAGCTTTAAGCTAGT+TGG | + | chr1_2:59609231-59609250 | None:intergenic | 35.0% |
| AAAATAGTTTAGGCTCCGTT+TGG | + | chr1_2:59609435-59609454 | None:intergenic | 35.0% | |
| ! | ATAAGTTTTGCAAGACGGTT+TGG | + | chr1_2:59609589-59609608 | None:intergenic | 35.0% |
| CTCAAGTGAACCTTCAATTT+GGG | - | chr1_2:59609658-59609677 | Msa0081090:intron | 35.0% | |
| !! | TGTTAGTTGTTGTTTGCTTC+TGG | - | chr1_2:59609923-59609942 | Msa0081090:CDS | 35.0% |
| ATCTGAAAAGTCCAAGAAAG+AGG | + | chr1_2:59609993-59610012 | None:intergenic | 35.0% | |
| ! | TGCATCCATTTTCAAAAGCA+GGG | + | chr1_2:59610055-59610074 | None:intergenic | 35.0% |
| ! | TTGCATCCATTTTCAAAAGC+AGG | + | chr1_2:59610056-59610075 | None:intergenic | 35.0% |
| !!! | GAGAAGCGTACATTTTTAGT+TGG | - | chr1_2:59610095-59610114 | Msa0081090:CDS | 35.0% |
| AAACATCCTTCCTATGGAAA+AGG | - | chr1_2:59610233-59610252 | Msa0081090:CDS | 35.0% | |
| ! | ACAAGGTTTTCCTTTTCCAT+AGG | + | chr1_2:59610246-59610265 | None:intergenic | 35.0% |
| GGGTTTATTGTTGCCTTATA+TGG | - | chr1_2:59610320-59610339 | Msa0081090:intron | 35.0% | |
| ! | CTGAAAAGGCATAATGTAGA+TGG | + | chr1_2:59610558-59610577 | None:intergenic | 35.0% |
| ! | CATCTACATTATGCCTTTTC+AGG | - | chr1_2:59610556-59610575 | Msa0081090:CDS | 35.0% |
| GAAGTCACAGCAACATATAT+TGG | - | chr1_2:59610678-59610697 | Msa0081090:CDS | 35.0% | |
| TTTACTTTATCCTTGACGAC+TGG | + | chr1_2:59610750-59610769 | None:intergenic | 35.0% | |
| GTTTCTGATAACATTAAGGG+AGG | - | chr1_2:59610786-59610805 | Msa0081090:CDS | 35.0% | |
| ! | TATTTTGCTGAACGATACCA+AGG | - | chr1_2:59610933-59610952 | Msa0081090:CDS | 35.0% |
| GATAAAAGATGTTGAGACGT+TGG | - | chr1_2:59611022-59611041 | Msa0081090:CDS | 35.0% | |
| TAAAAGATGTTGAGACGTTG+GGG | - | chr1_2:59611024-59611043 | Msa0081090:CDS | 35.0% | |
| GGCTGAAAAATTAATTAGCC+AGG | - | chr1_2:59611103-59611122 | Msa0081090:CDS | 35.0% | |
| ACAAATGCAAAAGGAGAGAA+TGG | - | chr1_2:59611157-59611176 | Msa0081090:CDS | 35.0% | |
| TCAAATTCTCCTCAACACTA+TGG | + | chr1_2:59611208-59611227 | None:intergenic | 35.0% | |
| TTATGGAAGGAAATGATTGC+AGG | - | chr1_2:59611230-59611249 | Msa0081090:CDS | 35.0% | |
| GGATTGCAACGATAATAAAC+AGG | + | chr1_2:59611329-59611348 | None:intergenic | 35.0% | |
| CAATGCCTCATCATAGAATT+GGG | - | chr1_2:59611348-59611367 | Msa0081090:CDS | 35.0% | |
| GGACAAGCAAAATCATAAGT+TGG | + | chr1_2:59611392-59611411 | None:intergenic | 35.0% | |
| AATACTGAGCATTACGATCA+TGG | + | chr1_2:59611466-59611485 | None:intergenic | 35.0% | |
| ATCGTAATGCTCAGTATTAC+AGG | - | chr1_2:59611468-59611487 | Msa0081090:CDS | 35.0% | |
| TCAGTATTACAGGATTCAAG+CGG | - | chr1_2:59611478-59611497 | Msa0081090:CDS | 35.0% | |
| TTCTCATCTACGAATTTAGC+CGG | - | chr1_2:59611519-59611538 | Msa0081090:CDS | 35.0% | |
| ! | CTTCTATGGTTTGTCCAAAA+TGG | - | chr1_2:59611578-59611597 | Msa0081090:CDS | 35.0% |
| ! | ACAAAAAGTATGAAGCTGCT+GGG | - | chr1_2:59612044-59612063 | Msa0081090:CDS | 35.0% |
| CTTCTCTACTTCCTTTACTA+TGG | + | chr1_2:59612170-59612189 | None:intergenic | 35.0% | |
| CATAGTAAAGGAAGTAGAGA+AGG | - | chr1_2:59612168-59612187 | Msa0081090:CDS | 35.0% | |
| ! | AGTGGTGTTTTACATCTTGA+AGG | - | chr1_2:59612217-59612236 | Msa0081090:intron | 35.0% |
| ! | ATTAGTTAGCCTGACATTGA+TGG | - | chr1_2:59612291-59612310 | Msa0081090:intron | 35.0% |
| AATCAAACTCCATCAATGTC+AGG | + | chr1_2:59612303-59612322 | None:intergenic | 35.0% | |
| CTAATCTATACACTACCATC+AGG | - | chr1_2:59612660-59612679 | Msa0081090:intron | 35.0% | |
| TCTCTCTCAAATTAAAGCCA+AGG | + | chr1_2:59612783-59612802 | None:intergenic | 35.0% | |
| GAGAGAGAAAAATGACACTT+TGG | - | chr1_2:59612795-59612814 | Msa0081090:intron | 35.0% | |
| AAATGACACTTTGGTCTAAG+TGG | - | chr1_2:59612804-59612823 | Msa0081090:intron | 35.0% | |
| TTCCATGGAAGATTCATGAA+AGG | + | chr1_2:59612914-59612933 | None:intergenic | 35.0% | |
| GTGCTATAAAACTAGTTCCA+TGG | + | chr1_2:59612929-59612948 | None:intergenic | 35.0% | |
| !! | GGTATGCACTTTTAAGAGAA+TGG | + | chr1_2:59612983-59613002 | None:intergenic | 35.0% |
| AGCAAACAGGTATATGCATA+GGG | + | chr1_2:59613004-59613023 | None:intergenic | 35.0% | |
| AAGCAAACAGGTATATGCAT+AGG | + | chr1_2:59613005-59613024 | None:intergenic | 35.0% | |
| ! | TTTGCTTCAGTGTTGAGTAT+TGG | - | chr1_2:59613018-59613037 | Msa0081090:intron | 35.0% |
| GTGGGATTAGGTATATACAT+AGG | + | chr1_2:59613106-59613125 | None:intergenic | 35.0% | |
| !! | ACTTTTAAGAGAGTGGGATT+AGG | + | chr1_2:59613118-59613137 | None:intergenic | 35.0% |
| !! | GTATGCACTTTTAAGAGAGT+GGG | + | chr1_2:59613124-59613143 | None:intergenic | 35.0% |
| TACCCTATGAATAGACACTT+TGG | - | chr1_2:59613141-59613160 | Msa0081090:intron | 35.0% | |
| ! | GAACCAAAGTGTCTATTCAT+AGG | + | chr1_2:59613147-59613166 | None:intergenic | 35.0% |
| AAAAAGGAGACTCTAGCATA+TGG | - | chr1_2:59613295-59613314 | Msa0081090:intron | 35.0% | |
| ACGCTTAAGATTTCGCATAT+TGG | + | chr1_2:59613326-59613345 | None:intergenic | 35.0% | |
| AATATGCGAAATCTTAAGCG+TGG | - | chr1_2:59613325-59613344 | Msa0081090:intron | 35.0% | |
| !! | AATAACACGATTGGTTTCGA+AGG | + | chr1_2:59613409-59613428 | None:intergenic | 35.0% |
| GGTAATTTGGATAGCTATTG+TGG | - | chr1_2:59613498-59613517 | Msa0081090:intron | 35.0% | |
| TAAGCATAACACTGAAGTGA+TGG | + | chr1_2:59613541-59613560 | None:intergenic | 35.0% | |
| TTTGTTCTTCTGCGTCACAT+TGG | - | chr1_2:59608785-59608804 | Msa0081090:CDS | 40.0% | |
| GCAACCCTTCCTAATTTCTA+TGG | - | chr1_2:59608815-59608834 | Msa0081090:CDS | 40.0% | |
| !!! | TTTTTTTTTGGGTGGTGTCC+GGG | + | chr1_2:59609037-59609056 | None:intergenic | 40.0% |
| ! | CTGGCATAAGTTTTGCAAGA+CGG | + | chr1_2:59609594-59609613 | None:intergenic | 40.0% |
| GCTCAAGTGAACCTTCAATT+TGG | - | chr1_2:59609657-59609676 | Msa0081090:intron | 40.0% | |
| TTGAGGGTGAGTGATTGTTT+AGG | - | chr1_2:59609869-59609888 | Msa0081090:CDS | 40.0% | |
| TGAGGGTGAGTGATTGTTTA+GGG | - | chr1_2:59609870-59609889 | Msa0081090:CDS | 40.0% | |
| AATCGCAGATCTAGCTATCT+GGG | - | chr1_2:59610130-59610149 | Msa0081090:CDS | 40.0% | |
| AGACTCAGTAGTAGTATCAC+AGG | + | chr1_2:59610208-59610227 | None:intergenic | 40.0% | |
| ! | GGTTTTCCTTTTCCATAGGA+AGG | + | chr1_2:59610242-59610261 | None:intergenic | 40.0% |
| GCAATCACTAAACAAGCACA+AGG | + | chr1_2:59610263-59610282 | None:intergenic | 40.0% | |
| AACAATAAACCCTGTCAGCA+GGG | + | chr1_2:59610312-59610331 | None:intergenic | 40.0% | |
| ATCCGCTTTGCTCTATTGTT+TGG | - | chr1_2:59610367-59610386 | Msa0081090:intron | 40.0% | |
| GTCCAAACAATAGAGCAAAG+CGG | + | chr1_2:59610372-59610391 | None:intergenic | 40.0% | |
| TCTGATAACATTAAGGGAGG+AGG | - | chr1_2:59610789-59610808 | Msa0081090:CDS | 40.0% | |
| AAGTTGGAAAAGTTCGCTTG+CGG | - | chr1_2:59610847-59610866 | Msa0081090:CDS | 40.0% | |
| AACGCAAAATAACCTGACCT+TGG | + | chr1_2:59610953-59610972 | None:intergenic | 40.0% | |
| AAAAGATGTTGAGACGTTGG+GGG | - | chr1_2:59611025-59611044 | Msa0081090:CDS | 40.0% | |
| ! | AGATTACTTCCCTGAGTTGA+TGG | - | chr1_2:59611076-59611095 | Msa0081090:CDS | 40.0% |
| TCCACGTGAACAAATGCAAA+AGG | - | chr1_2:59611148-59611167 | Msa0081090:CDS | 40.0% | |
| ! | TCCTTTTGCATTTGTTCACG+TGG | + | chr1_2:59611152-59611171 | None:intergenic | 40.0% |
| ATGCAAAAGGAGAGAATGGA+TGG | - | chr1_2:59611161-59611180 | Msa0081090:CDS | 40.0% | |
| ATGCAGAAACCATAGTGTTG+AGG | - | chr1_2:59611196-59611215 | Msa0081090:CDS | 40.0% | |
| AAATGATTGCAGGATCAGAG+AGG | - | chr1_2:59611240-59611259 | Msa0081090:CDS | 40.0% | |
| AATGATTGCAGGATCAGAGA+GGG | - | chr1_2:59611241-59611260 | Msa0081090:CDS | 40.0% | |
| CCAATTCTATGATGAGGCAT+TGG | + | chr1_2:59611350-59611369 | None:intergenic | 40.0% | |
| CCAATGCCTCATCATAGAAT+TGG | - | chr1_2:59611347-59611366 | Msa0081090:CDS | 40.0% | |
| TTGGACCCAATTCTATGATG+AGG | + | chr1_2:59611356-59611375 | None:intergenic | 40.0% | |
| CCTTCATGAGCATCAACAAA+TGG | + | chr1_2:59611413-59611432 | None:intergenic | 40.0% | |
| ! | CCATTTGTTGATGCTCATGA+AGG | - | chr1_2:59611410-59611429 | Msa0081090:CDS | 40.0% |
| ATGGTATTCACTTGACCGAA+GGG | + | chr1_2:59611447-59611466 | None:intergenic | 40.0% | |
| CGAATTTAGCCGGTTGAATA+TGG | - | chr1_2:59611529-59611548 | Msa0081090:CDS | 40.0% | |
| GAGTGTAGACCATATTCAAC+CGG | + | chr1_2:59611541-59611560 | None:intergenic | 40.0% | |
| TCAGCAAACGAAAGCTTCTA+TGG | - | chr1_2:59611564-59611583 | Msa0081090:CDS | 40.0% | |
| GTATTGTTAACCCTCACTGA+TGG | - | chr1_2:59611986-59612005 | Msa0081090:intron | 40.0% | |
| ATGCGGACAAATGATTTCTC+AGG | + | chr1_2:59612013-59612032 | None:intergenic | 40.0% | |
| ! | TTTTGTGCCTAGGTATGATG+CGG | + | chr1_2:59612030-59612049 | None:intergenic | 40.0% |
| !! | GCTTCATACTTTTTGTGCCT+AGG | + | chr1_2:59612040-59612059 | None:intergenic | 40.0% |
| ! | CACAAAAAGTATGAAGCTGC+TGG | - | chr1_2:59612043-59612062 | Msa0081090:CDS | 40.0% |
| ! | AGGAAGTAACCTTGATGGAT+TGG | - | chr1_2:59612137-59612156 | Msa0081090:CDS | 40.0% |
| !! | GGAAGTAACCTTGATGGATT+GGG | - | chr1_2:59612138-59612157 | Msa0081090:CDS | 40.0% |
| !! | GAAGTAACCTTGATGGATTG+GGG | - | chr1_2:59612139-59612158 | Msa0081090:CDS | 40.0% |
| TTGGGGAAATGCCATAGTAA+AGG | - | chr1_2:59612156-59612175 | Msa0081090:CDS | 40.0% | |
| AAGTAGAGAAGGACCAAGTT+GGG | - | chr1_2:59612179-59612198 | Msa0081090:intron | 40.0% | |
| ! | ACCAAGTTGGGAATGTCAAA+GGG | - | chr1_2:59612191-59612210 | Msa0081090:intron | 40.0% |
| ATACGATTGATAGAGAGGTG+GGG | + | chr1_2:59612746-59612765 | None:intergenic | 40.0% | |
| GATACGATTGATAGAGAGGT+GGG | + | chr1_2:59612747-59612766 | None:intergenic | 40.0% | |
| TGATACGATTGATAGAGAGG+TGG | + | chr1_2:59612748-59612767 | None:intergenic | 40.0% | |
| TAAAGCCAAGGCTTATTGGT+GGG | + | chr1_2:59612771-59612790 | None:intergenic | 40.0% | |
| TTAAAGCCAAGGCTTATTGG+TGG | + | chr1_2:59612772-59612791 | None:intergenic | 40.0% | |
| GACCTTTCATGAATCTTCCA+TGG | - | chr1_2:59612909-59612928 | Msa0081090:intron | 40.0% | |
| GGTCAGGATGGACAATAATA+AGG | + | chr1_2:59612960-59612979 | None:intergenic | 40.0% | |
| !! | ACTTTTAAGAGAATGGGGTC+AGG | + | chr1_2:59612976-59612995 | None:intergenic | 40.0% |
| TACTCAACACTGAAGCAAAC+AGG | + | chr1_2:59613017-59613036 | None:intergenic | 40.0% | |
| !! | GGTATGCACTTTTAAGAGAG+TGG | + | chr1_2:59613125-59613144 | None:intergenic | 40.0% |
| !! | TTTGCTTTGTTTGCAGCTTG+AGG | - | chr1_2:59613234-59613253 | Msa0081090:intron | 40.0% |
| GCTTAACCCTTGCACAAAAA+AGG | - | chr1_2:59613279-59613298 | Msa0081090:intron | 40.0% | |
| !!! | GAGTCTCCTTTTTTGTGCAA+GGG | + | chr1_2:59613288-59613307 | None:intergenic | 40.0% |
| !!! | AGAGTCTCCTTTTTTGTGCA+AGG | + | chr1_2:59613289-59613308 | None:intergenic | 40.0% |
| TGGAGAGAAAGGGATATTTC+AGG | - | chr1_2:59613362-59613381 | Msa0081090:CDS | 40.0% | |
| GGGATTGCAAATAACACGAT+TGG | + | chr1_2:59613418-59613437 | None:intergenic | 40.0% | |
| !! | GTGTTATTTGCAATCCCAGA+TGG | - | chr1_2:59613421-59613440 | Msa0081090:intron | 40.0% |
| TAGTCGAGAACCCAAATACA+AGG | + | chr1_2:59613571-59613590 | None:intergenic | 40.0% | |
| TTGCTTAATCAATGCCCTGA+GGG | + | chr1_2:59613680-59613699 | None:intergenic | 40.0% | |
| CGTTGGACAAGAGAAATGTG+GGG | + | chr1_2:59608672-59608691 | None:intergenic | 45.0% | |
| CCGTTGGACAAGAGAAATGT+GGG | + | chr1_2:59608673-59608692 | None:intergenic | 45.0% | |
| CCCACATTTCTCTTGTCCAA+CGG | - | chr1_2:59608670-59608689 | Msa0081090:three_prime_UTR | 45.0% | |
| CCACATTTCTCTTGTCCAAC+GGG | - | chr1_2:59608671-59608690 | Msa0081090:three_prime_UTR | 45.0% | |
| !!! | TTTTTTTTGGGTGGTGTCCG+GGG | + | chr1_2:59609036-59609055 | None:intergenic | 45.0% |
| ! | AGACGGTTTGGAAGAACTTG+TGG | + | chr1_2:59609577-59609596 | None:intergenic | 45.0% |
| GAAAGTGGGACCCAAATTGA+AGG | + | chr1_2:59609671-59609690 | None:intergenic | 45.0% | |
| GTCCCACTTTCTCTCCTATT+GGG | - | chr1_2:59609680-59609699 | Msa0081090:intron | 45.0% | |
| GACCCAATAGGAGAGAAAGT+GGG | + | chr1_2:59609685-59609704 | None:intergenic | 45.0% | |
| CTGTAGTTCAAGGACCCAAT+AGG | + | chr1_2:59609697-59609716 | None:intergenic | 45.0% | |
| TATGCACCTGTACTCTCATC+AGG | - | chr1_2:59610029-59610048 | Msa0081090:CDS | 45.0% | |
| !! | TCAGGCCCTGCTTTTGAAAA+TGG | - | chr1_2:59610047-59610066 | Msa0081090:CDS | 45.0% |
| CAATCGCAGATCTAGCTATC+TGG | - | chr1_2:59610129-59610148 | Msa0081090:CDS | 45.0% | |
| TAGTTGTATCCCTGCTGACA+GGG | - | chr1_2:59610300-59610319 | Msa0081090:CDS | 45.0% | |
| CAACAATAAACCCTGTCAGC+AGG | + | chr1_2:59610313-59610332 | None:intergenic | 45.0% | |
| !!! | CATTATGCCTTTTCAGGTGC+TGG | - | chr1_2:59610562-59610581 | Msa0081090:CDS | 45.0% |
| TCTCTTTCCAGCACCTGAAA+AGG | + | chr1_2:59610572-59610591 | None:intergenic | 45.0% | |
| !! | TTTCAGGTGCTGGAAAGAGA+TGG | - | chr1_2:59610572-59610591 | Msa0081090:CDS | 45.0% |
| !! | TTCAGGTGCTGGAAAGAGAT+GGG | - | chr1_2:59610573-59610592 | Msa0081090:CDS | 45.0% |
| GAAAGAGATGGGAAAGCTTG+AGG | - | chr1_2:59610584-59610603 | Msa0081090:CDS | 45.0% | |
| !!! | TCTTTTGGCTTGGTTGCAGA+TGG | + | chr1_2:59610723-59610742 | None:intergenic | 45.0% |
| ! | ACTTTTCCAACTTCAGCAGC+TGG | + | chr1_2:59610840-59610859 | None:intergenic | 45.0% |
| CCAATGTGAAGATAGCCACT+GGG | + | chr1_2:59610885-59610904 | None:intergenic | 45.0% | |
| TCCAATGTGAAGATAGCCAC+TGG | + | chr1_2:59610886-59610905 | None:intergenic | 45.0% | |
| ATGATTGCAGGATCAGAGAG+GGG | - | chr1_2:59611242-59611261 | Msa0081090:CDS | 45.0% | |
| CTTGCATATCCAACTTCCCA+CGG | + | chr1_2:59611283-59611302 | None:intergenic | 45.0% | |
| !! | GGATCACGGAGTGATTTGTT+TGG | + | chr1_2:59611308-59611327 | None:intergenic | 45.0% |
| ! | AAGGTATCACTCATGCCCTT+CGG | - | chr1_2:59611429-59611448 | Msa0081090:CDS | 45.0% |
| CATGGTATTCACTTGACCGA+AGG | + | chr1_2:59611448-59611467 | None:intergenic | 45.0% | |
| TTACAGGATTCAAGCGGACA+TGG | - | chr1_2:59611484-59611503 | Msa0081090:CDS | 45.0% | |
| TACAGGATTCAAGCGGACAT+GGG | - | chr1_2:59611485-59611504 | Msa0081090:CDS | 45.0% | |
| ACTCCTCTCTGTACTTGTAC+AGG | - | chr1_2:59611853-59611872 | Msa0081090:intron | 45.0% | |
| CTCCTCTCTGTACTTGTACA+GGG | - | chr1_2:59611854-59611873 | Msa0081090:intron | 45.0% | |
| TCCTCTCTGTACTTGTACAG+GGG | - | chr1_2:59611855-59611874 | Msa0081090:intron | 45.0% | |
| TTTCTCAGGACCATCAGTGA+GGG | + | chr1_2:59611999-59612018 | None:intergenic | 45.0% | |
| ATTTCTCAGGACCATCAGTG+AGG | + | chr1_2:59612000-59612019 | None:intergenic | 45.0% | |
| CATTTGTCCGCATCATACCT+AGG | - | chr1_2:59612020-59612039 | Msa0081090:intron | 45.0% | |
| AGGTGAGGAAGTAACCTTGA+TGG | - | chr1_2:59612132-59612151 | Msa0081090:CDS | 45.0% | |
| GAAGTAGAGAAGGACCAAGT+TGG | - | chr1_2:59612178-59612197 | Msa0081090:intron | 45.0% | |
| ! | GACCAAGTTGGGAATGTCAA+AGG | - | chr1_2:59612190-59612209 | Msa0081090:intron | 45.0% |
| ACCCTTTGACATTCCCAACT+TGG | + | chr1_2:59612195-59612214 | None:intergenic | 45.0% | |
| GGGAATGTCAAAGGGTTAAG+TGG | - | chr1_2:59612199-59612218 | Msa0081090:intron | 45.0% | |
| ! | CCAAGTGAGCTTCAGTTTTG+TGG | + | chr1_2:59612254-59612273 | None:intergenic | 45.0% |
| CCACAAAACTGAAGCTCACT+TGG | - | chr1_2:59612251-59612270 | Msa0081090:intron | 45.0% | |
| TATGTTCAGCATAGCCGCAA+AGG | - | chr1_2:59612629-59612648 | Msa0081090:intron | 45.0% | |
| TGGCAGTCTTGATCAAGTGT+CGG | + | chr1_2:59612711-59612730 | None:intergenic | 45.0% | |
| TGATCAAGACTGCCATCACT+CGG | - | chr1_2:59612716-59612735 | Msa0081090:intron | 45.0% | |
| TACGATTGATAGAGAGGTGG+GGG | + | chr1_2:59612745-59612764 | None:intergenic | 45.0% | |
| GGGTGATACGATTGATAGAG+AGG | + | chr1_2:59612751-59612770 | None:intergenic | 45.0% | |
| TATCACCCACCAATAAGCCT+TGG | - | chr1_2:59612763-59612782 | Msa0081090:intron | 45.0% | |
| TTAAGAGAATGGGGTCAGGA+TGG | + | chr1_2:59612972-59612991 | None:intergenic | 45.0% | |
| ACTTAAACAGGGAAGCAAGC+AGG | + | chr1_2:59613209-59613228 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGCAGCTTGAGGA+AGG | - | chr1_2:59613238-59613257 | Msa0081090:intron | 45.0% |
| AGTATTGCAGCTGGAGAGAA+AGG | - | chr1_2:59613351-59613370 | Msa0081090:CDS | 45.0% | |
| GTATTGCAGCTGGAGAGAAA+GGG | - | chr1_2:59613352-59613371 | Msa0081090:CDS | 45.0% | |
| TATTTGCAATCCCAGATGGC+AGG | - | chr1_2:59613425-59613444 | Msa0081090:intron | 45.0% | |
| GTTGCTTAATCAATGCCCTG+AGG | + | chr1_2:59613681-59613700 | None:intergenic | 45.0% | |
| ! | GCTTTGTTCACTGTGCTGCT+AGG | + | chr1_2:59608517-59608536 | None:intergenic | 50.0% |
| GAACAAAGCGACGACGAAGA+TGG | - | chr1_2:59608528-59608547 | Msa0081090:three_prime_UTR | 50.0% | |
| GTCGATGGATGGAGAGAATC+CGG | + | chr1_2:59608626-59608645 | None:intergenic | 50.0% | |
| AGAAATGTGGGGACGGAATC+AGG | + | chr1_2:59608661-59608680 | None:intergenic | 50.0% | |
| GGACAAGAGAAATGTGGGGA+CGG | + | chr1_2:59608668-59608687 | None:intergenic | 50.0% | |
| CCCGTTGGACAAGAGAAATG+TGG | + | chr1_2:59608674-59608693 | None:intergenic | 50.0% | |
| GAGAAAGGAAACGTACCCGT+TGG | + | chr1_2:59608689-59608708 | None:intergenic | 50.0% | |
| CGCAACAGGTCCAAATTTCG+TGG | - | chr1_2:59608758-59608777 | Msa0081090:CDS | 50.0% | |
| GGTCCCACTTTCTCTCCTAT+TGG | - | chr1_2:59609679-59609698 | Msa0081090:intron | 50.0% | |
| GGACCCAATAGGAGAGAAAG+TGG | + | chr1_2:59609686-59609705 | None:intergenic | 50.0% | |
| CTGTCAGCAGGGATACAACT+AGG | + | chr1_2:59610301-59610320 | None:intergenic | 50.0% | |
| CTAGTTGTATCCCTGCTGAC+AGG | - | chr1_2:59610299-59610318 | Msa0081090:CDS | 50.0% | |
| !!! | TTGACGACTGGCTGGTCTTT+TGG | + | chr1_2:59610738-59610757 | None:intergenic | 50.0% |
| AAAAGACCAGCCAGTCGTCA+AGG | - | chr1_2:59610737-59610756 | Msa0081090:CDS | 50.0% | |
| CTTTATCCTTGACGACTGGC+TGG | + | chr1_2:59610746-59610765 | None:intergenic | 50.0% | |
| GGAAGATCTATCTCTGCCGA+AGG | + | chr1_2:59610819-59610838 | None:intergenic | 50.0% | |
| GATCTTCCAGCTGCTGAAGT+TGG | - | chr1_2:59610831-59610850 | Msa0081090:CDS | 50.0% | |
| TGAAGATAGCCACTGGGTTC+AGG | + | chr1_2:59610879-59610898 | None:intergenic | 50.0% | |
| CCCAGTGGCTATCTTCACAT+TGG | - | chr1_2:59610882-59610901 | Msa0081090:CDS | 50.0% | |
| TGCTGAACGATACCAAGGTC+AGG | - | chr1_2:59610938-59610957 | Msa0081090:CDS | 50.0% | |
| !! | CTTCCCTGAGTTGATGGAAC+TGG | - | chr1_2:59611082-59611101 | Msa0081090:CDS | 50.0% |
| CAGCCAGTTCCATCAACTCA+GGG | + | chr1_2:59611088-59611107 | None:intergenic | 50.0% | |
| TCAGCCAGTTCCATCAACTC+AGG | + | chr1_2:59611089-59611108 | None:intergenic | 50.0% | |
| CATCAACATACGCCTTACCC+TGG | + | chr1_2:59611124-59611143 | None:intergenic | 50.0% | |
| GTTTGCAGTGTTGTGTCCGT+GGG | - | chr1_2:59611264-59611283 | Msa0081090:CDS | 50.0% | |
| CCTTGCACTGTAGGAAATCG+TGG | + | chr1_2:59611626-59611645 | None:intergenic | 50.0% | |
| CCACGATTTCCTACAGTGCA+AGG | - | chr1_2:59611623-59611642 | Msa0081090:intron | 50.0% | |
| CGCACAATTCCTTGCACTGT+AGG | + | chr1_2:59611635-59611654 | None:intergenic | 50.0% | |
| GTGCAAGGAATTGTGCGTAG+AGG | - | chr1_2:59611638-59611657 | Msa0081090:intron | 50.0% | |
| CCTCTCTGTACTTGTACAGG+GGG | - | chr1_2:59611856-59611875 | Msa0081090:intron | 50.0% | |
| TCATGGAATGGGACAAGCTC+TGG | - | chr1_2:59611897-59611916 | Msa0081090:intron | 50.0% | |
| ! | CAGTGTGTCTGGGACATACA+GGG | + | chr1_2:59611946-59611965 | None:intergenic | 50.0% |
| GCAATGACAGCAGTGTGTCT+GGG | + | chr1_2:59611956-59611975 | None:intergenic | 50.0% | |
| CAGACACACTGCTGTCATTG+CGG | - | chr1_2:59611955-59611974 | Msa0081090:intron | 50.0% | |
| AGAGTCTGTATCAGCAGGTG+AGG | - | chr1_2:59612117-59612136 | Msa0081090:CDS | 50.0% | |
| GGCATTTCCCCAATCCATCA+AGG | + | chr1_2:59612149-59612168 | None:intergenic | 50.0% | |
| !! | CAGTCTTGATCAAGTGTCGG+TGG | + | chr1_2:59612708-59612727 | None:intergenic | 50.0% |
| AACAGGGAAGCAAGCAGGTT+TGG | + | chr1_2:59613204-59613223 | None:intergenic | 50.0% | |
| TTTGCAGCTTGAGGAAGGAG+AGG | - | chr1_2:59613243-59613262 | Msa0081090:intron | 50.0% | |
| !! | ACACGATTGGTTTCGAAGGC+CGG | + | chr1_2:59613405-59613424 | None:intergenic | 50.0% |
| AATGCCAAACAGTGCCCTCA+GGG | - | chr1_2:59613663-59613682 | Msa0081090:five_prime_UTR | 50.0% | |
| GAATCCGGCGAGTTTGGATG+CGG | + | chr1_2:59608611-59608630 | None:intergenic | 55.0% | |
| TGGAGAGAATCCGGCGAGTT+TGG | + | chr1_2:59608617-59608636 | None:intergenic | 55.0% | |
| AATGTGGGGACGGAATCAGG+AGG | + | chr1_2:59608658-59608677 | None:intergenic | 55.0% | |
| AAGGTTCAGGGTTCGAACCC+CGG | - | chr1_2:59609016-59609035 | Msa0081090:intron | 55.0% | |
| GCAGATCTAGCTATCTGGGC+AGG | - | chr1_2:59610134-59610153 | Msa0081090:CDS | 55.0% | |
| !!! | GACTGGCTGGTCTTTTGGCT+TGG | + | chr1_2:59610733-59610752 | None:intergenic | 55.0% |
| TAAGGGAGGAGGCAAGCCTT+CGG | - | chr1_2:59610800-59610819 | Msa0081090:CDS | 55.0% | |
| GGTTTGCAGTGTTGTGTCCG+TGG | - | chr1_2:59611263-59611282 | Msa0081090:CDS | 55.0% | |
| GTGTTGTGTCCGTGGGAAGT+TGG | - | chr1_2:59611271-59611290 | Msa0081090:CDS | 55.0% | |
| CCCCCTGTACAAGTACAGAG+AGG | + | chr1_2:59611859-59611878 | None:intergenic | 55.0% | |
| ! | GCAGTGTGTCTGGGACATAC+AGG | + | chr1_2:59611947-59611966 | None:intergenic | 55.0% |
| CGCAATGACAGCAGTGTGTC+TGG | + | chr1_2:59611957-59611976 | None:intergenic | 55.0% | |
| GACGCAGAGTCTGTATCAGC+AGG | - | chr1_2:59612112-59612131 | Msa0081090:CDS | 55.0% | |
| !! | CTTGATCAAGTGTCGGTGGC+TGG | + | chr1_2:59612704-59612723 | None:intergenic | 55.0% |
| TCAAGACTGCCATCACTCGG+TGG | - | chr1_2:59612719-59612738 | Msa0081090:intron | 55.0% | |
| !! | GCGTGGAGAAGTATTGCAGC+TGG | - | chr1_2:59613342-59613361 | Msa0081090:intron | 55.0% |
| GGTGTGATGTACCCTTCGTC+CGG | - | chr1_2:59613383-59613402 | Msa0081090:CDS | 55.0% | |
| ATGTCTGCTGCCTGCCATCT+GGG | + | chr1_2:59613438-59613457 | None:intergenic | 55.0% | |
| GAATGCCAAACAGTGCCCTC+AGG | - | chr1_2:59613662-59613681 | Msa0081090:five_prime_UTR | 55.0% | |
| !! | AATGCCCTGAGGGCACTGTT+TGG | + | chr1_2:59613670-59613689 | None:intergenic | 55.0% |
| ATCGCCGCATCCAAACTCGC+CGG | - | chr1_2:59608604-59608623 | Msa0081090:three_prime_UTR | 60.0% | |
| !! | GGAAGGGAGGTGTCGATGGA+TGG | + | chr1_2:59608637-59608656 | None:intergenic | 60.0% |
| !! | AGGAGGAAGGGAGGTGTCGA+TGG | + | chr1_2:59608641-59608660 | None:intergenic | 60.0% |
| GACGGAATCAGGAGGAAGGG+AGG | + | chr1_2:59608650-59608669 | None:intergenic | 60.0% | |
| GGGGACGGAATCAGGAGGAA+GGG | + | chr1_2:59608653-59608672 | None:intergenic | 60.0% | |
| TGGGGACGGAATCAGGAGGA+AGG | + | chr1_2:59608654-59608673 | None:intergenic | 60.0% | |
| ! | GCAGGGCCTGATGAGAGTAC+AGG | + | chr1_2:59610038-59610057 | None:intergenic | 60.0% |
| GCTATCTGGGCAGGTCTTGC+AGG | - | chr1_2:59610143-59610162 | Msa0081090:CDS | 60.0% | |
| CGGTTTGCACCTGAACCCAG+TGG | - | chr1_2:59610867-59610886 | Msa0081090:CDS | 60.0% | |
| ATGGGAAGGTGGCTGCCTGA+TGG | + | chr1_2:59612678-59612697 | None:intergenic | 60.0% | |
| !! | AGTGTCGGTGGCTGGAGGAT+GGG | + | chr1_2:59612696-59612715 | None:intergenic | 60.0% |
| !! | AAGTGTCGGTGGCTGGAGGA+TGG | + | chr1_2:59612697-59612716 | None:intergenic | 60.0% |
| !! | GATCAAGTGTCGGTGGCTGG+AGG | + | chr1_2:59612701-59612720 | None:intergenic | 60.0% |
| GGTTTCGAAGGCCGGACGAA+GGG | + | chr1_2:59613397-59613416 | None:intergenic | 60.0% | |
| TGGTTTCGAAGGCCGGACGA+AGG | + | chr1_2:59613398-59613417 | None:intergenic | 60.0% | |
| GATGTCTGCTGCCTGCCATC+TGG | + | chr1_2:59613439-59613458 | None:intergenic | 60.0% | |
| GATGCGGCGATCCCCGCTAA+CGG | + | chr1_2:59608595-59608614 | None:intergenic | 65.0% | |
| GTGGCTGGAGGATGGGAAGG+TGG | + | chr1_2:59612689-59612708 | None:intergenic | 65.0% | |
| TCGGTGGCTGGAGGATGGGA+AGG | + | chr1_2:59612692-59612711 | None:intergenic | 65.0% | |
| CGCGGCGGCGGAGAAGGAAA+GGG | + | chr1_2:59608569-59608588 | None:intergenic | 70.0% | |
| GATCCCCGCTAACGGTGGCG+CGG | + | chr1_2:59608587-59608606 | None:intergenic | 70.0% | |
| AGGTGGGGGCCACCGAGTGA+TGG | + | chr1_2:59612731-59612750 | None:intergenic | 70.0% | |
| GCGCGGCGGCGGAGAAGGAA+AGG | + | chr1_2:59608570-59608589 | None:intergenic | 75.0% | |
| GCGGCGATCCCCGCTAACGG+TGG | + | chr1_2:59608592-59608611 | None:intergenic | 75.0% | |
| ! | CGCTAACGGTGGCGCGGCGG+CGG | + | chr1_2:59608581-59608600 | None:intergenic | 80.0% |
| ! | CGCCGCCGCGCCACCGTTAG+CGG | - | chr1_2:59608579-59608598 | Msa0081090:three_prime_UTR | 80.0% |
| ! | GCCGCCGCGCCACCGTTAGC+GGG | - | chr1_2:59608580-59608599 | Msa0081090:three_prime_UTR | 80.0% |
| ! | CCCCGCTAACGGTGGCGCGG+CGG | + | chr1_2:59608584-59608603 | None:intergenic | 80.0% |
| ! | CCGCCGCGCCACCGTTAGCG+GGG | - | chr1_2:59608581-59608600 | Msa0081090:three_prime_UTR | 80.0% |
| ! | CGGTGGCGCGGCGGCGGAGA+AGG | + | chr1_2:59608575-59608594 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 59608432 | 59613773 | 59608432 | ID=Msa0081090;Name=Msa0081090 |
| chr1_2 | mRNA | 59608432 | 59613773 | 59608432 | ID=Msa0081090-mRNA-1;Parent=Msa0081090;Name=Msa0081090-mRNA-1;_AED=0.05;_eAED=0.05;_QI=115|0.66|0.85|0.85|1|1|7|305|752 |
| chr1_2 | exon | 59608432 | 59608955 | 59608432 | ID=Msa0081090-mRNA-1:exon:19350;Parent=Msa0081090-mRNA-1 |
| chr1_2 | exon | 59609863 | 59610330 | 59609863 | ID=Msa0081090-mRNA-1:exon:19349;Parent=Msa0081090-mRNA-1 |
| chr1_2 | exon | 59610505 | 59611627 | 59610505 | ID=Msa0081090-mRNA-1:exon:19348;Parent=Msa0081090-mRNA-1 |
| chr1_2 | exon | 59611713 | 59611764 | 59611713 | ID=Msa0081090-mRNA-1:exon:19347;Parent=Msa0081090-mRNA-1 |
| chr1_2 | exon | 59612041 | 59612194 | 59612041 | ID=Msa0081090-mRNA-1:exon:19346;Parent=Msa0081090-mRNA-1 |
| chr1_2 | exon | 59613343 | 59613439 | 59613343 | ID=Msa0081090-mRNA-1:exon:19345;Parent=Msa0081090-mRNA-1 |
| chr1_2 | exon | 59613513 | 59613773 | 59613513 | ID=Msa0081090-mRNA-1:exon:19344;Parent=Msa0081090-mRNA-1 |
| chr1_2 | five_prime_UTR | 59613659 | 59613773 | 59613659 | ID=Msa0081090-mRNA-1:five_prime_utr;Parent=Msa0081090-mRNA-1 |
| chr1_2 | CDS | 59613513 | 59613658 | 59613513 | ID=Msa0081090-mRNA-1:cds;Parent=Msa0081090-mRNA-1 |
| chr1_2 | CDS | 59613343 | 59613439 | 59613343 | ID=Msa0081090-mRNA-1:cds;Parent=Msa0081090-mRNA-1 |
| chr1_2 | CDS | 59612041 | 59612194 | 59612041 | ID=Msa0081090-mRNA-1:cds;Parent=Msa0081090-mRNA-1 |
| chr1_2 | CDS | 59611713 | 59611764 | 59611713 | ID=Msa0081090-mRNA-1:cds;Parent=Msa0081090-mRNA-1 |
| chr1_2 | CDS | 59610505 | 59611627 | 59610505 | ID=Msa0081090-mRNA-1:cds;Parent=Msa0081090-mRNA-1 |
| chr1_2 | CDS | 59609863 | 59610330 | 59609863 | ID=Msa0081090-mRNA-1:cds;Parent=Msa0081090-mRNA-1 |
| chr1_2 | CDS | 59608737 | 59608955 | 59608737 | ID=Msa0081090-mRNA-1:cds;Parent=Msa0081090-mRNA-1 |
| chr1_2 | three_prime_UTR | 59608432 | 59608736 | 59608432 | ID=Msa0081090-mRNA-1:three_prime_utr;Parent=Msa0081090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
