Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019180 | XP_039684115.1 | 94.388 | 392 | 5 | 1 | 1 | 375 | 1 | 392 | 0.0 | 741 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019180 | sp|Q9SLA8|FABI_ARATH | 70.543 | 387 | 96 | 2 | 1 | 369 | 1 | 387 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019180 | A0A072TZC5 | 94.388 | 392 | 5 | 1 | 1 | 375 | 1 | 392 | 0.0 | 741 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021290 | Msa1019180 | 0.824737 | 6.864366e-54 | -8.615850e-47 |
| Msa0021320 | Msa1019180 | 0.835927 | 1.261656e-56 | -8.615850e-47 |
| Msa0045620 | Msa1019180 | 0.824720 | 6.925795e-54 | -8.615850e-47 |
| Msa0063190 | Msa1019180 | 0.810417 | 1.164943e-50 | -8.615850e-47 |
| Msa0100600 | Msa1019180 | 0.800287 | 1.547175e-48 | -8.615850e-47 |
| Msa0100890 | Msa1019180 | 0.800074 | 1.708883e-48 | -8.615850e-47 |
| Msa0607800 | Msa1019180 | 0.807501 | 4.902128e-50 | -8.615850e-47 |
| Msa0623310 | Msa1019180 | 0.808518 | 2.978238e-50 | -8.615850e-47 |
| Msa0630440 | Msa1019180 | 0.830789 | 2.409319e-55 | -8.615850e-47 |
| Msa0648040 | Msa1019180 | 0.826085 | 3.291283e-54 | -8.615850e-47 |
| Msa0658120 | Msa1019180 | 0.835559 | 1.564027e-56 | -8.615850e-47 |
| Msa0687370 | Msa1019180 | 0.805903 | 1.066023e-49 | -8.615850e-47 |
| Msa0688380 | Msa1019180 | 0.800585 | 1.345315e-48 | -8.615850e-47 |
| Msa0689660 | Msa1019180 | 0.816611 | 5.057253e-52 | -8.615850e-47 |
| Msa0689830 | Msa1019180 | 0.857099 | 2.056186e-62 | -8.615850e-47 |
| Msa0690740 | Msa1019180 | 0.828950 | 6.759641e-55 | -8.615850e-47 |
| Msa0702970 | Msa1019180 | 0.824403 | 8.224672e-54 | -8.615850e-47 |
| Msa0707260 | Msa1019180 | 0.807651 | 4.555745e-50 | -8.615850e-47 |
| Msa0756330 | Msa1019180 | 0.818364 | 2.037453e-52 | -8.615850e-47 |
| Msa0835750 | Msa1019180 | 0.824926 | 6.195016e-54 | -8.615850e-47 |
| Msa0173250 | Msa1019180 | 0.805030 | 1.625233e-49 | -8.615850e-47 |
| Msa0192050 | Msa1019180 | 0.812376 | 4.374499e-51 | -8.615850e-47 |
| Msa0388250 | Msa1019180 | 0.813841 | 2.086696e-51 | -8.615850e-47 |
| Msa0401060 | Msa1019180 | 0.839125 | 1.910030e-57 | -8.615850e-47 |
| Msa0416210 | Msa1019180 | 0.834178 | 3.482970e-56 | -8.615850e-47 |
| Msa0433630 | Msa1019180 | 0.822053 | 2.910201e-53 | -8.615850e-47 |
| Msa0447870 | Msa1019180 | 0.816676 | 4.890397e-52 | -8.615850e-47 |
| Msa0458100 | Msa1019180 | 0.808433 | 3.104456e-50 | -8.615850e-47 |
| Msa1001620 | Msa1019180 | 0.800385 | 1.477484e-48 | -8.615850e-47 |
| Msa1019180 | Msa1019200 | 0.844363 | 7.918788e-59 | -8.615850e-47 |
| Msa1019180 | Msa1021560 | 0.819500 | 1.124005e-52 | -8.615850e-47 |
| Msa1019180 | Msa1050260 | 0.829864 | 4.055273e-55 | -8.615850e-47 |
| Msa1019180 | Msa1104110 | 0.859424 | 4.176753e-63 | -8.615850e-47 |
| Msa1019180 | Msa1124210 | 0.839618 | 1.422804e-57 | -8.615850e-47 |
| Msa1019180 | Msa1147700 | 0.876663 | 1.167566e-68 | -8.615850e-47 |
| Msa1019180 | Msa1148930 | 0.826513 | 2.603539e-54 | -8.615850e-47 |
| Msa1019180 | Msa1180840 | 0.824096 | 9.712678e-54 | -8.615850e-47 |
| Msa1019180 | Msa1188340 | 0.844189 | 8.818750e-59 | -8.615850e-47 |
| Msa1019180 | Msa1206040 | 0.803060 | 4.174056e-49 | -8.615850e-47 |
| Msa1019180 | Msa1220580 | 0.823674 | 1.219889e-53 | -8.615850e-47 |
| Msa1019180 | Msa1226370 | 0.814359 | 1.603599e-51 | -8.615850e-47 |
| Msa1019180 | Msa1231490 | 0.806148 | 9.469209e-50 | -8.615850e-47 |
| Msa1019180 | Msa1240940 | 0.849962 | 2.308541e-60 | -8.615850e-47 |
| Msa1019180 | Msa1262590 | 0.804905 | 1.725498e-49 | -8.615850e-47 |
| Msa1019180 | Msa1282300 | 0.844167 | 8.941423e-59 | -8.615850e-47 |
| Msa1019180 | Msa1321530 | 0.810532 | 1.099984e-50 | -8.615850e-47 |
| Msa1019180 | Msa1328870 | 0.802222 | 6.214709e-49 | -8.615850e-47 |
| Msa1019180 | Msa1334560 | 0.826979 | 2.015426e-54 | -8.615850e-47 |
| Msa1019180 | Msa1371800 | 0.815561 | 8.679593e-52 | -8.615850e-47 |
| Msa1019180 | Msa1376310 | 0.826294 | 2.934950e-54 | -8.615850e-47 |
| Msa1019180 | Msa1385570 | 0.810772 | 9.759641e-51 | -8.615850e-47 |
| Msa1019180 | Msa1395050 | 0.839894 | 1.205988e-57 | -8.615850e-47 |
| Msa0331110 | Msa1019180 | 0.802609 | 5.171651e-49 | -8.615850e-47 |
| Msa0356640 | Msa1019180 | 0.822401 | 2.415869e-53 | -8.615850e-47 |
| Msa0495620 | Msa1019180 | 0.826073 | 3.314229e-54 | -8.615850e-47 |
| Msa0518590 | Msa1019180 | 0.805225 | 1.479307e-49 | -8.615850e-47 |
| Msa0521510 | Msa1019180 | 0.821050 | 4.962437e-53 | -8.615850e-47 |
| Msa0521530 | Msa1019180 | 0.807903 | 4.026535e-50 | -8.615850e-47 |
| Msa0553750 | Msa1019180 | 0.805638 | 1.211831e-49 | -8.615850e-47 |
| Msa0566460 | Msa1019180 | 0.814502 | 1.491552e-51 | -8.615850e-47 |
| Msa0572830 | Msa1019180 | 0.812355 | 4.420248e-51 | -8.615850e-47 |
| Msa0846900 | Msa1019180 | 0.832194 | 1.086302e-55 | -8.615850e-47 |
| Msa0900090 | Msa1019180 | 0.804074 | 2.572385e-49 | -8.615850e-47 |
| Msa0925330 | Msa1019180 | 0.812204 | 4.769592e-51 | -8.615850e-47 |
| Msa0926310 | Msa1019180 | 0.803047 | 4.200576e-49 | -8.615850e-47 |
| Msa0930040 | Msa1019180 | 0.807532 | 4.827420e-50 | -8.615850e-47 |
| Msa0966120 | Msa1019180 | 0.811851 | 5.692171e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019180 | MtrunA17_Chr7g0234681 | 94.388 | 392 | 5 | 1 | 1 | 375 | 1 | 392 | 0.0 | 741 |
| Msa1019180 | MtrunA17_Chr4g0038121 | 75.765 | 392 | 78 | 1 | 1 | 375 | 1 | 392 | 0.0 | 597 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019180 | AT2G05990.1 | 70.543 | 387 | 96 | 2 | 1 | 369 | 1 | 387 | 0.0 | 523 |
| Msa1019180 | AT2G05990.2 | 70.543 | 387 | 96 | 2 | 1 | 369 | 1 | 387 | 0.0 | 523 |
Find 102 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGTATCCCTTACATCTTC+TGG | 0.235340 | 7_1:+40383811 | None:intergenic |
| GAATCTGTTAAGAATGATTT+CGG | 0.304948 | 7_1:-40382122 | Msa1019180:CDS |
| ATATAATGTATCGAATAATT+TGG | 0.314672 | 7_1:-40379276 | Msa1019180:intron |
| ACATCTTCTGGGACATCTTC+GGG | 0.321218 | 7_1:+40383823 | None:intergenic |
| AGGCAACGCTGCTGCTTTCT+TGG | 0.328247 | 7_1:-40379608 | Msa1019180:CDS |
| TGAATAGAAGAATCCGGATT+TGG | 0.338635 | 7_1:+40379435 | None:intergenic |
| CAAATTACATTAATTTGAAA+TGG | 0.348676 | 7_1:-40385683 | Msa1019180:exon |
| TACATCTTCTGGGACATCTT+CGG | 0.349503 | 7_1:+40383822 | None:intergenic |
| ACCCTGCCTCCAACAATTGC+AGG | 0.371535 | 7_1:+40385580 | None:intergenic |
| TGTAGCTTGCTTGTTTGAAC+TGG | 0.373553 | 7_1:+40385432 | None:intergenic |
| CAATTTCAATGTTGGTCCCT+TGG | 0.385038 | 7_1:+40379478 | None:intergenic |
| AATTTAGGTCCTGCAATTGT+TGG | 0.398491 | 7_1:-40385589 | Msa1019180:CDS |
| GTCCTGCAATTGTTGGAGGC+AGG | 0.401234 | 7_1:-40385582 | Msa1019180:CDS |
| GAGTTCTGCTAAAGCTGCTT+TGG | 0.401461 | 7_1:-40381630 | Msa1019180:CDS |
| GCTATGCTGGAGCTTCAAAT+TGG | 0.405248 | 7_1:-40383702 | Msa1019180:CDS |
| TTCTTTCTGTAGTGGTGCAT+TGG | 0.413027 | 7_1:+40379744 | None:intergenic |
| AGCCGTGCTGCGAAAGCAAT+TGG | 0.421435 | 7_1:-40379799 | Msa1019180:CDS |
| TGTTCGAAGTAGTTGAGCTT+TGG | 0.423445 | 7_1:+40386900 | None:intergenic |
| CTGAAATTCTTGTTGGCACA+TGG | 0.429094 | 7_1:-40384594 | Msa1019180:CDS |
| TTTCAAATTAATGTAATTTG+AGG | 0.434321 | 7_1:+40385686 | None:intergenic |
| GGTAAAAGGGCATTTATTGC+TGG | 0.437861 | 7_1:-40384676 | Msa1019180:CDS |
| TGCTAATCAAATTAGTCTAT+AGG | 0.444147 | 7_1:+40379209 | None:intergenic |
| GTGAAACCTCTCAAATCAAT+TGG | 0.444170 | 7_1:+40385403 | None:intergenic |
| GTGGCTGATGACAATGGATA+TGG | 0.444764 | 7_1:-40384652 | Msa1019180:CDS |
| GTTACAAGATGGATCATTGA+TGG | 0.447922 | 7_1:-40383887 | Msa1019180:CDS |
| TGTGTGTGAATATGAGATTA+AGG | 0.448988 | 7_1:+40386807 | None:intergenic |
| TTCAAATTAATGTAATTTGA+GGG | 0.456066 | 7_1:+40385687 | None:intergenic |
| ACGTATCCCTTACATCTTCT+GGG | 0.457261 | 7_1:+40383812 | None:intergenic |
| AAACAGTTCAATTTCAATGT+TGG | 0.458472 | 7_1:+40379470 | None:intergenic |
| GCAGGAGCTGAAATTCTTGT+TGG | 0.467824 | 7_1:-40384601 | Msa1019180:CDS |
| CAATTTGATACATTAGTAAG+TGG | 0.469032 | 7_1:-40379359 | Msa1019180:three_prime_UTR |
| TTGCTTGTTTGAACTGGACT+CGG | 0.470834 | 7_1:+40385438 | None:intergenic |
| ATAATTTGAATAGAAGAATC+CGG | 0.470839 | 7_1:+40379429 | None:intergenic |
| TACAGTTTGTTCGTCATCAT+AGG | 0.473821 | 7_1:+40379396 | None:intergenic |
| GCTTCAGAGAGGATTATTCC+CGG | 0.474860 | 7_1:-40381752 | Msa1019180:CDS |
| GGACTAAACGCCATGGGAGT+TGG | 0.478063 | 7_1:-40379535 | Msa1019180:CDS |
| AAAGCTAATAAGCGCTATGC+TGG | 0.479446 | 7_1:-40383715 | Msa1019180:CDS |
| TCCTGCAATTGTTGGAGGCA+GGG | 0.482255 | 7_1:-40385581 | Msa1019180:CDS |
| TACGCGATGTTGAGGCCAGC+TGG | 0.485138 | 7_1:+40385497 | None:intergenic |
| AGTTCAAACAAGCAAGCTAC+AGG | 0.489581 | 7_1:-40385430 | Msa1019180:CDS |
| GCAAAATCTCTTGCAGAGGC+AGG | 0.496222 | 7_1:-40384619 | Msa1019180:CDS |
| ACCAGTGATAGCTGATGCTA+AGG | 0.496400 | 7_1:+40379579 | None:intergenic |
| GATGTTGAGGCCAGCTGGAA+GGG | 0.497173 | 7_1:+40385502 | None:intergenic |
| TTAAAGATCTCGACATTCCA+AGG | 0.507705 | 7_1:-40379495 | Msa1019180:CDS |
| AGAGTTAATACTATATCTGC+AGG | 0.508041 | 7_1:-40381433 | Msa1019180:intron |
| AGAAATGAGAGAGTTTGAAG+TGG | 0.512380 | 7_1:+40386778 | None:intergenic |
| AGCTTCAAATTGGACTGTCC+AGG | 0.518132 | 7_1:-40383692 | Msa1019180:intron |
| CACACGCCCATTCAAAAGTC+AGG | 0.521003 | 7_1:+40379248 | None:intergenic |
| GTTGGAGGCAGGGTTAAAGT+TGG | 0.522947 | 7_1:-40385571 | Msa1019180:CDS |
| CGATGTTGAGGCCAGCTGGA+AGG | 0.523446 | 7_1:+40385501 | None:intergenic |
| ATCGGCAAAACCCTTCCAGC+TGG | 0.526540 | 7_1:-40385512 | Msa1019180:CDS |
| GTGTGTGAATATGAGATTAA+GGG | 0.528055 | 7_1:+40386808 | None:intergenic |
| AACTATTGTCCGAGACATCT+CGG | 0.534077 | 7_1:-40381969 | Msa1019180:CDS |
| ATGTCGAGATCTTTAAATAC+CGG | 0.534663 | 7_1:+40379502 | None:intergenic |
| ATATCCTTTCCGAGATGTCT+CGG | 0.538814 | 7_1:+40381960 | None:intergenic |
| CCCTTAGCATCAGCTATCAC+TGG | 0.539477 | 7_1:-40379580 | Msa1019180:CDS |
| GATTACTAAAGTGTATCCCT+TGG | 0.540026 | 7_1:-40383863 | Msa1019180:CDS |
| TTAGGTCCTGCAATTGTTGG+AGG | 0.540472 | 7_1:-40385586 | Msa1019180:CDS |
| GGGAGTTGGAGTCGACAGTC+CGG | 0.544328 | 7_1:-40379521 | Msa1019180:CDS |
| AAATTAATGTAATTTGAGGG+TGG | 0.544736 | 7_1:+40385690 | None:intergenic |
| GTTGGCTCATGTGCTAAACT+AGG | 0.548124 | 7_1:-40385553 | Msa1019180:CDS |
| CTGATGACAATGGATATGGC+TGG | 0.549684 | 7_1:-40384648 | Msa1019180:CDS |
| TTTCAATGGCTAGGTCCACT+TGG | 0.549950 | 7_1:-40379823 | Msa1019180:intron |
| GCTGTCATATACGTGGATAA+CGG | 0.553495 | 7_1:-40379556 | Msa1019180:CDS |
| GCATGTAGTTCTTTCTGTAG+TGG | 0.554632 | 7_1:+40379736 | None:intergenic |
| AAGGGCATTTATTGCTGGAG+TGG | 0.561874 | 7_1:-40384671 | Msa1019180:CDS |
| AACCAATTGCTTTCGCAGCA+CGG | 0.569745 | 7_1:+40379797 | None:intergenic |
| CTTCAGAGAGGATTATTCCC+GGG | 0.572560 | 7_1:-40381751 | Msa1019180:intron |
| AAGTGTTTGTCATGTTGCAT+CGG | 0.576957 | 7_1:-40385530 | Msa1019180:CDS |
| ATTCGACAAAATTGTAACAA+AGG | 0.579105 | 7_1:-40385467 | Msa1019180:CDS |
| TTCGCAGCACGGCTTCCAAG+TGG | 0.586555 | 7_1:+40379808 | None:intergenic |
| TGAAATTCTTGTTGGCACAT+GGG | 0.589713 | 7_1:-40384593 | Msa1019180:CDS |
| CAAAATTGTAACAAAGGCAA+TGG | 0.592386 | 7_1:-40385461 | Msa1019180:CDS |
| CACTGGTGCTGTCATATACG+TGG | 0.594459 | 7_1:-40379563 | Msa1019180:CDS |
| TGCATGATATGCAGATATGG+TGG | 0.595279 | 7_1:-40381659 | Msa1019180:intron |
| TAAAGATCTCGACATTCCAA+GGG | 0.601417 | 7_1:-40379494 | Msa1019180:CDS |
| AATATATGTTAGAGAGAGCG+AGG | 0.607923 | 7_1:+40381775 | None:intergenic |
| CTTGTGCACTCACTTGCTAA+CGG | 0.608026 | 7_1:-40382086 | Msa1019180:CDS |
| CGATTGCAATGTCAAGACCT+AGG | 0.608810 | 7_1:-40385636 | Msa1019180:CDS |
| GGATAACGGACTAAACGCCA+TGG | 0.612060 | 7_1:-40379542 | Msa1019180:CDS |
| GGATTGCCAATTGATTTGAG+AGG | 0.613627 | 7_1:-40385409 | Msa1019180:intron |
| GCATGATATGCAGATATGGT+GGG | 0.614556 | 7_1:-40381658 | Msa1019180:intron |
| ACTGTCGACTCCAACTCCCA+TGG | 0.616357 | 7_1:+40379525 | None:intergenic |
| CCAGTGATAGCTGATGCTAA+GGG | 0.619196 | 7_1:+40379580 | None:intergenic |
| AGAGTAACTAGACGCAGACA+AGG | 0.630194 | 7_1:+40381930 | None:intergenic |
| AGTGTCATAGACTGCATCCA+AGG | 0.631619 | 7_1:+40383846 | None:intergenic |
| CTCACTTGCTAACGGACCAG+AGG | 0.633819 | 7_1:-40382078 | Msa1019180:intron |
| CTACAGAAAGAACTACATGC+AGG | 0.634330 | 7_1:-40379733 | Msa1019180:intron |
| TGATGACAATGGATATGGCT+GGG | 0.648294 | 7_1:-40384647 | Msa1019180:CDS |
| GTGTCATAGACTGCATCCAA+GGG | 0.649282 | 7_1:+40383847 | None:intergenic |
| GTATTTGTAACAGAGGAGGT+AGG | 0.657611 | 7_1:-40379628 | Msa1019180:intron |
| ATAAGAAAATGGGATCAATG+TGG | 0.658252 | 7_1:+40386751 | None:intergenic |
| GCTGGAGTGGCTGATGACAA+TGG | 0.659246 | 7_1:-40384658 | Msa1019180:CDS |
| TTGTCCGAGACATCTCGGAA+AGG | 0.663357 | 7_1:-40381964 | Msa1019180:CDS |
| TAATCAAATTAGTCTATAGG+TGG | 0.667718 | 7_1:+40379212 | None:intergenic |
| AATAGCAAAATCTCTTGCAG+AGG | 0.669703 | 7_1:-40384623 | Msa1019180:CDS |
| GATAACGGACTAAACGCCAT+GGG | 0.670540 | 7_1:-40379541 | Msa1019180:CDS |
| TAACATATATTGCTTCAGAG+AGG | 0.670936 | 7_1:-40381763 | Msa1019180:CDS |
| CATGATATGCAGATATGGTG+GGG | 0.689566 | 7_1:-40381657 | Msa1019180:intron |
| CTATTCAAATTATGACAATG+CGG | 0.692412 | 7_1:-40379419 | Msa1019180:three_prime_UTR |
| ATGATATGCAGATATGGTGG+GGG | 0.702886 | 7_1:-40381656 | Msa1019180:intron |
| TTTGAGTCTAGCCTACGACG+TGG | 0.762074 | 7_1:-40384024 | Msa1019180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTCCAAATAATAAATT+AGG | + | chr7_1:40380292-40380311 | None:intergenic | 10.0% |
| !!! | TTTTTTTTCTTTCTTTTTAA+CGG | - | chr7_1:40381287-40381306 | Msa1019180:intron | 10.0% |
| !!! | TTTGAAAGTTTTTTTTTTTT+TGG | + | chr7_1:40382742-40382761 | None:intergenic | 10.0% |
| !! | TTTCAAAATCTAATAAAATA+AGG | - | chr7_1:40382755-40382774 | Msa1019180:intron | 10.0% |
| !!! | ATTCTTTTTAAAGAAAAATA+TGG | - | chr7_1:40382984-40383003 | Msa1019180:intron | 10.0% |
| !!! | ATCATGTTTTTATTTATTTT+AGG | - | chr7_1:40384818-40384837 | Msa1019180:intron | 10.0% |
| !!! | TTTATTTTAGGTTAAATAAA+AGG | - | chr7_1:40384830-40384849 | Msa1019180:intron | 10.0% |
| !! | ATCTAATAATTAAAACTAAG+AGG | - | chr7_1:40379591-40379610 | Msa1019180:CDS | 15.0% |
| !! | TCTAATAATTAAAACTAAGA+GGG | - | chr7_1:40379592-40379611 | Msa1019180:CDS | 15.0% |
| !!! | TTTGGAATTTATATTAAGTT+TGG | - | chr7_1:40380301-40380320 | Msa1019180:intron | 15.0% |
| !!! | TTTCGTTGTATTATAATTTT+TGG | - | chr7_1:40380348-40380367 | Msa1019180:intron | 15.0% |
| !! | TTCAAATTAATGTAATTTGA+GGG | + | chr7_1:40380413-40380432 | None:intergenic | 15.0% |
| !! | TTTCAAATTAATGTAATTTG+AGG | + | chr7_1:40380414-40380433 | None:intergenic | 15.0% |
| !!! | CAAATTACATTAATTTGAAA+TGG | - | chr7_1:40380414-40380433 | Msa1019180:intron | 15.0% |
| !!! | TTTATCTTTTGTTATAGAAA+TGG | + | chr7_1:40381012-40381031 | None:intergenic | 15.0% |
| !! | TGTAATATTTATTTACTTAC+AGG | + | chr7_1:40381532-40381551 | None:intergenic | 15.0% |
| !!! | AATTTTACATTAATTGACAA+AGG | + | chr7_1:40382152-40382171 | None:intergenic | 15.0% |
| !!! | ATTTCTTCAAGTTTTTTATT+TGG | - | chr7_1:40383280-40383299 | Msa1019180:intron | 15.0% |
| !!! | TAAATTACTTACAACATTTT+TGG | + | chr7_1:40383503-40383522 | None:intergenic | 15.0% |
| !!! | ATCTTTACAAATGTTTTTAT+AGG | + | chr7_1:40383685-40383704 | None:intergenic | 15.0% |
| !!! | AAATTTCATAATTTGTATGT+CGG | + | chr7_1:40384766-40384785 | None:intergenic | 15.0% |
| !! | TATCATAATAGTTTGATATA+TGG | + | chr7_1:40385721-40385740 | None:intergenic | 15.0% |
| !!! | TTTACTTAAAATGTTTTCAA+TGG | - | chr7_1:40386260-40386279 | Msa1019180:intron | 15.0% |
| !! | ATATAATGTATCGAATAATT+TGG | - | chr7_1:40386821-40386840 | Msa1019180:five_prime_UTR | 15.0% |
| !! | AGAAAAGAAAAAAAAAACGT+TGG | + | chr7_1:40379265-40379284 | None:intergenic | 20.0% |
| !!! | TACCTTTTTGATAAGAAAAT+GGG | + | chr7_1:40379359-40379378 | None:intergenic | 20.0% |
| !!! | TTACCTTTTTGATAAGAAAA+TGG | + | chr7_1:40379360-40379379 | None:intergenic | 20.0% |
| !!! | TTTTCATGTTTTTCGTAATT+TGG | - | chr7_1:40379615-40379634 | Msa1019180:CDS | 20.0% |
| !!! | AAAATACTATAAGCTTTTCT+TGG | - | chr7_1:40379650-40379669 | Msa1019180:intron | 20.0% |
| !! | CATAATCATAACATATCTTA+TGG | - | chr7_1:40379740-40379759 | Msa1019180:CDS | 20.0% |
| !!! | TTTTCTTTCCTTTTTTGAAA+AGG | + | chr7_1:40379795-40379814 | None:intergenic | 20.0% |
| !! | TATCTAATATGAATTTCCAA+AGG | + | chr7_1:40379837-40379856 | None:intergenic | 20.0% |
| !!! | AATTTGAAAACTTTTGTGAT+GGG | + | chr7_1:40380492-40380511 | None:intergenic | 20.0% |
| !!! | AAATTTGAAAACTTTTGTGA+TGG | + | chr7_1:40380493-40380512 | None:intergenic | 20.0% |
| !!! | TCACAAAAGTTTTCAAATTT+AGG | - | chr7_1:40380493-40380512 | Msa1019180:intron | 20.0% |
| !!! | TACAATTTTGTCGAATTTTA+AGG | + | chr7_1:40380626-40380645 | None:intergenic | 20.0% |
| !!! | ATATTTTATAGAACAGCTTA+CGG | + | chr7_1:40381122-40381141 | None:intergenic | 20.0% |
| !!! | TAGAAATAACTGATTTATGA+GGG | + | chr7_1:40381258-40381277 | None:intergenic | 20.0% |
| !!! | TTAGAAATAACTGATTTATG+AGG | + | chr7_1:40381259-40381278 | None:intergenic | 20.0% |
| !!! | TGCTACATTTTCTTATAATA+TGG | + | chr7_1:40381375-40381394 | None:intergenic | 20.0% |
| !! | CAACAACATTGTTTAAAAAA+GGG | + | chr7_1:40381787-40381806 | None:intergenic | 20.0% |
| !! | TCAACAACATTGTTTAAAAA+AGG | + | chr7_1:40381788-40381807 | None:intergenic | 20.0% |
| !! | TAAATTGATCATCATCAATT+TGG | - | chr7_1:40382943-40382962 | Msa1019180:intron | 20.0% |
| !!! | CTTTTTAAAGAAAAATATGG+AGG | - | chr7_1:40382987-40383006 | Msa1019180:intron | 20.0% |
| !!! | TAAGAAAAATAATTGACTCT+TGG | - | chr7_1:40383034-40383053 | Msa1019180:intron | 20.0% |
| !! | AAAAAACTTGAAGAAATTCA+AGG | + | chr7_1:40383277-40383296 | None:intergenic | 20.0% |
| !!! | ATAATGCTTTTTGAAACATA+GGG | - | chr7_1:40383333-40383352 | Msa1019180:intron | 20.0% |
| !! | TAGAAATGAAAATGTTATCA+TGG | - | chr7_1:40383563-40383582 | Msa1019180:intron | 20.0% |
| !! | TTATTGTAAAATAATACCTC+TGG | + | chr7_1:40384038-40384057 | None:intergenic | 20.0% |
| !!! | TATTTTACAATAATGAGATG+AGG | - | chr7_1:40384045-40384064 | Msa1019180:intron | 20.0% |
| !! | AAAGAAATCAACTCTATTAT+AGG | - | chr7_1:40384099-40384118 | Msa1019180:intron | 20.0% |
| !!! | TTTTTGAAATTGCATTTATC+AGG | - | chr7_1:40384606-40384625 | Msa1019180:CDS | 20.0% |
| !!! | ATTTTAGGTTAAATAAAAGG+TGG | - | chr7_1:40384833-40384852 | Msa1019180:intron | 20.0% |
| !! | CAAATATAACTTAAGCTTAA+AGG | - | chr7_1:40385370-40385389 | Msa1019180:intron | 20.0% |
| !! | AATTAGAATATTGTCGTATA+TGG | - | chr7_1:40385597-40385616 | Msa1019180:CDS | 20.0% |
| !!! | ATGAATAATAAGAAGCATAT+CGG | + | chr7_1:40385918-40385937 | None:intergenic | 20.0% |
| !!! | ATTCATATCGAATACTTTTT+GGG | + | chr7_1:40385949-40385968 | None:intergenic | 20.0% |
| !!! | AATTCATATCGAATACTTTT+TGG | + | chr7_1:40385950-40385969 | None:intergenic | 20.0% |
| !!! | AAATTGTATGTTTTTTGTGA+CGG | - | chr7_1:40386090-40386109 | Msa1019180:intron | 20.0% |
| !! | ATAAGAATATATGCTGATAT+AGG | - | chr7_1:40386122-40386141 | Msa1019180:intron | 20.0% |
| !! | ATAATTTGAATAGAAGAATC+CGG | + | chr7_1:40386671-40386690 | None:intergenic | 20.0% |
| !! | ATCCCATTTTCTTATCAAAA+AGG | - | chr7_1:40379354-40379373 | Msa1019180:three_prime_UTR | 25.0% |
| ! | AAACAAAAGAGAACAAGAAA+AGG | + | chr7_1:40379405-40379424 | None:intergenic | 25.0% |
| !!! | AACTTGTTAAACTACTCAAA+TGG | + | chr7_1:40379543-40379562 | None:intergenic | 25.0% |
| !! | TGAGTAGTTTAACAAGTTTT+TGG | - | chr7_1:40379545-40379564 | Msa1019180:CDS | 25.0% |
| !!! | TTAACAAGTTTTTGGTTCAA+AGG | - | chr7_1:40379553-40379572 | Msa1019180:CDS | 25.0% |
| !! | CATTTATGCCTTTTCAAAAA+AGG | - | chr7_1:40379784-40379803 | Msa1019180:CDS | 25.0% |
| ! | ACGAGTAAGTTATAAATTCA+AGG | - | chr7_1:40380034-40380053 | Msa1019180:intron | 25.0% |
| ! | NNNNNNNNNNGGGATAAGCA+AGG | - | chr7_1:40380223-40380242 | Msa1019180:intron | 25.0% |
| !! | TAAGCAAGGAAATTTTCAAA+TGG | - | chr7_1:40380237-40380256 | Msa1019180:intron | 25.0% |
| ! | CCTTGATAAAATGTTTGAAA+TGG | + | chr7_1:40380266-40380285 | None:intergenic | 25.0% |
| !! | CCATTTCAAACATTTTATCA+AGG | - | chr7_1:40380263-40380282 | Msa1019180:intron | 25.0% |
| ! | AGGAGTCCTAATTTATTATT+TGG | - | chr7_1:40380283-40380302 | Msa1019180:intron | 25.0% |
| ! | AAATTAATGTAATTTGAGGG+TGG | + | chr7_1:40380410-40380429 | None:intergenic | 25.0% |
| !! | ATTTGAAAACTTTTGTGATG+GGG | + | chr7_1:40380491-40380510 | None:intergenic | 25.0% |
| ! | ATTCGACAAAATTGTAACAA+AGG | - | chr7_1:40380630-40380649 | Msa1019180:intron | 25.0% |
| ! | AAATAGACACTATAATACGA+AGG | + | chr7_1:40380737-40380756 | None:intergenic | 25.0% |
| ! | ACATTAATTCAGATGAGTAT+GGG | + | chr7_1:40380838-40380857 | None:intergenic | 25.0% |
| ! | AACATTAATTCAGATGAGTA+TGG | + | chr7_1:40380839-40380858 | None:intergenic | 25.0% |
| ! | TCATCTGAATTAATGTTAGA+AGG | - | chr7_1:40380842-40380861 | Msa1019180:intron | 25.0% |
| ! | GAATGAGTAAACTGTTAATA+GGG | + | chr7_1:40380890-40380909 | None:intergenic | 25.0% |
| ! | TTCCAAAATCTACTTAAAGT+TGG | - | chr7_1:40380907-40380926 | Msa1019180:intron | 25.0% |
| !! | AACCAACTTTAAGTAGATTT+TGG | + | chr7_1:40380912-40380931 | None:intergenic | 25.0% |
| !! | AGAAATAACTGATTTATGAG+GGG | + | chr7_1:40381257-40381276 | None:intergenic | 25.0% |
| ! | TTGACATGATACAATTGTAA+TGG | - | chr7_1:40381330-40381349 | Msa1019180:intron | 25.0% |
| ! | ATGATACAATTGTAATGGTA+CGG | - | chr7_1:40381335-40381354 | Msa1019180:intron | 25.0% |
| !! | TAATTTTATGTGCAGGTAAA+AGG | - | chr7_1:40381407-40381426 | Msa1019180:intron | 25.0% |
| !! | AATTTTATGTGCAGGTAAAA+GGG | - | chr7_1:40381408-40381427 | Msa1019180:intron | 25.0% |
| ! | TAAACAATGTTGTTGAATAG+TGG | - | chr7_1:40381792-40381811 | Msa1019180:intron | 25.0% |
| ! | TTGTACTAAATATCGTATAG+CGG | + | chr7_1:40381866-40381885 | None:intergenic | 25.0% |
| ! | CACTAATATAACTAAACTTC+AGG | + | chr7_1:40381988-40382007 | None:intergenic | 25.0% |
| ! | ATTAGTGCTATGATTTATAC+AGG | - | chr7_1:40382001-40382020 | Msa1019180:intron | 25.0% |
| !! | TAACTATTACATTTTCATGC+AGG | - | chr7_1:40382039-40382058 | Msa1019180:intron | 25.0% |
| !!! | ATTTTAAGTATGTTGCTAAC+AGG | - | chr7_1:40382169-40382188 | Msa1019180:intron | 25.0% |
| !! | ATGATGATATATTTTGTGCA+TGG | + | chr7_1:40382339-40382358 | None:intergenic | 25.0% |
| ! | ATCTATTGTGAAAATTGTGT+AGG | - | chr7_1:40382357-40382376 | Msa1019180:intron | 25.0% |
| ! | ACAGAATGATAATATATACC+TGG | + | chr7_1:40382426-40382445 | None:intergenic | 25.0% |
| !!! | CTTATGTTTTTAACACATGA+AGG | + | chr7_1:40382636-40382655 | None:intergenic | 25.0% |
| ! | AAAACATAAGTTGTTCATAG+AGG | - | chr7_1:40382646-40382665 | Msa1019180:intron | 25.0% |
| ! | GGTGATTTACAATGTAAATT+TGG | + | chr7_1:40382721-40382740 | None:intergenic | 25.0% |
| ! | ACATGAGATTAATGTTCAAT+TGG | - | chr7_1:40382784-40382803 | Msa1019180:intron | 25.0% |
| !! | TTTTCAATGCCAGTTTATTT+CGG | - | chr7_1:40383086-40383105 | Msa1019180:intron | 25.0% |
| ! | CATCAGTAACATACATTAAT+AGG | - | chr7_1:40383135-40383154 | Msa1019180:intron | 25.0% |
| !! | AAAACTTTCATATTCAGGTT+TGG | + | chr7_1:40383228-40383247 | None:intergenic | 25.0% |
| ! | GAATCAAAACTTTCATATTC+AGG | + | chr7_1:40383233-40383252 | None:intergenic | 25.0% |
| !!! | TGTTTCAAAAAGCATTATCT+AGG | + | chr7_1:40383331-40383350 | None:intergenic | 25.0% |
| !!! | GATAATGCTTTTTGAAACAT+AGG | - | chr7_1:40383332-40383351 | Msa1019180:intron | 25.0% |
| ! | GTAATCATTAGAGATCATAT+TGG | - | chr7_1:40383613-40383632 | Msa1019180:intron | 25.0% |
| ! | GAATCTGTTAAGAATGATTT+CGG | - | chr7_1:40383975-40383994 | Msa1019180:intron | 25.0% |
| ! | ATCAAAATGTAATCTCTCTT+AGG | + | chr7_1:40384248-40384267 | None:intergenic | 25.0% |
| ! | AGTGAGAACAGATATATTTA+AGG | + | chr7_1:40384278-40384297 | None:intergenic | 25.0% |
| ! | CAATTTCAAAAAATCCAAAG+GGG | + | chr7_1:40384598-40384617 | None:intergenic | 25.0% |
| ! | GCAATTTCAAAAAATCCAAA+GGG | + | chr7_1:40384599-40384618 | None:intergenic | 25.0% |
| ! | TGCAATTTCAAAAAATCCAA+AGG | + | chr7_1:40384600-40384619 | None:intergenic | 25.0% |
| ! | TTAGAAACAACAATGCTAAA+TGG | + | chr7_1:40384924-40384943 | None:intergenic | 25.0% |
| !! | GAAAATGCTATGCTATTTAT+CGG | - | chr7_1:40384973-40384992 | Msa1019180:intron | 25.0% |
| ! | ATGGAGCTTAAAAAATGTAT+TGG | - | chr7_1:40385039-40385058 | Msa1019180:intron | 25.0% |
| ! | TAAATGAGAAGTTAGAGATA+TGG | - | chr7_1:40385096-40385115 | Msa1019180:intron | 25.0% |
| ! | AAATGAGAAGTTAGAGATAT+GGG | - | chr7_1:40385097-40385116 | Msa1019180:intron | 25.0% |
| !!! | ACGAACAATTTTTAATTCAG+AGG | - | chr7_1:40385196-40385215 | Msa1019180:intron | 25.0% |
| ! | AGACAAAGAGATATTAACTA+TGG | - | chr7_1:40385294-40385313 | Msa1019180:intron | 25.0% |
| ! | GACAAAGAGATATTAACTAT+GGG | - | chr7_1:40385295-40385314 | Msa1019180:intron | 25.0% |
| ! | ATGGAATTGAATGTTTAGAA+CGG | - | chr7_1:40385430-40385449 | Msa1019180:CDS | 25.0% |
| ! | TATAACAATGTTACTATGTG+TGG | - | chr7_1:40385489-40385508 | Msa1019180:CDS | 25.0% |
| ! | ATAACAATGTTACTATGTGT+GGG | - | chr7_1:40385490-40385509 | Msa1019180:CDS | 25.0% |
| ! | AGGAATAGAAATACAATCAT+TGG | - | chr7_1:40385532-40385551 | Msa1019180:CDS | 25.0% |
| ! | TAGCTTTCATAATAGAGAAA+AGG | - | chr7_1:40385570-40385589 | Msa1019180:CDS | 25.0% |
| ! | AGCTTTCATAATAGAGAAAA+GGG | - | chr7_1:40385571-40385590 | Msa1019180:CDS | 25.0% |
| ! | AAGTTCATAATAACAACAGT+AGG | + | chr7_1:40385779-40385798 | None:intergenic | 25.0% |
| ! | TTAGTCTGTTAACATATACT+TGG | + | chr7_1:40385836-40385855 | None:intergenic | 25.0% |
| ! | AAACATGTATCTTATCCAAA+TGG | + | chr7_1:40386041-40386060 | None:intergenic | 25.0% |
| !! | TTAAAATGTTTTCAATGGCT+AGG | - | chr7_1:40386265-40386284 | Msa1019180:intron | 25.0% |
| ! | CATTTGCATACTAAAAAGTA+GGG | + | chr7_1:40386435-40386454 | None:intergenic | 25.0% |
| ! | TCATTTGCATACTAAAAAGT+AGG | + | chr7_1:40386436-40386455 | None:intergenic | 25.0% |
| ! | AAACAGTTCAATTTCAATGT+TGG | + | chr7_1:40386630-40386649 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCAACACCAAATC+CGG | - | chr7_1:40386649-40386668 | Msa1019180:intron | 25.0% |
| ! | CTATTCAAATTATGACAATG+CGG | - | chr7_1:40386678-40386697 | Msa1019180:intron | 25.0% |
| ! | CAATTTGATACATTAGTAAG+TGG | - | chr7_1:40386738-40386757 | Msa1019180:intron | 25.0% |
| !! | TAATCAAATTAGTCTATAGG+TGG | + | chr7_1:40386888-40386907 | None:intergenic | 25.0% |
| !! | TGCTAATCAAATTAGTCTAT+AGG | + | chr7_1:40386891-40386910 | None:intergenic | 25.0% |
| GTGTGTGAATATGAGATTAA+GGG | + | chr7_1:40379292-40379311 | None:intergenic | 30.0% | |
| TGTGTGTGAATATGAGATTA+AGG | + | chr7_1:40379293-40379312 | None:intergenic | 30.0% | |
| ATAAGAAAATGGGATCAATG+TGG | + | chr7_1:40379349-40379368 | None:intergenic | 30.0% | |
| GAATGCAATCATGTAAATGT+TGG | - | chr7_1:40379433-40379452 | Msa1019180:three_prime_UTR | 30.0% | |
| TTCAAAGGTGGAAATTTCTT+TGG | - | chr7_1:40379568-40379587 | Msa1019180:CDS | 30.0% | |
| ! | TATAAGCTTTTCTTGGAATC+TGG | - | chr7_1:40379657-40379676 | Msa1019180:intron | 30.0% |
| ! | ATAAGCTTTTCTTGGAATCT+GGG | - | chr7_1:40379658-40379677 | Msa1019180:intron | 30.0% |
| !! | AAAGATGCATTTTGATCCTT+TGG | - | chr7_1:40379818-40379837 | Msa1019180:intron | 30.0% |
| GAATATGCTTGATGTAAAGT+TGG | - | chr7_1:40380084-40380103 | Msa1019180:intron | 30.0% | |
| CAAAATTGTAACAAAGGCAA+TGG | - | chr7_1:40380636-40380655 | Msa1019180:intron | 30.0% | |
| ACTATAATACGAAGGATTCA+TGG | + | chr7_1:40380729-40380748 | None:intergenic | 30.0% | |
| GGAATGAGTAAACTGTTAAT+AGG | + | chr7_1:40380891-40380910 | None:intergenic | 30.0% | |
| TTGGTTTACCGATCAAAATT+TGG | - | chr7_1:40380926-40380945 | Msa1019180:intron | 30.0% | |
| ! | CTGAAAGTAATTTTATGTGC+AGG | - | chr7_1:40381400-40381419 | Msa1019180:intron | 30.0% |
| ! | TGTGGAAAGACGTTTTTAAA+CGG | - | chr7_1:40382905-40382924 | Msa1019180:intron | 30.0% |
| TGTGGAATTTATGTGACTAA+GGG | + | chr7_1:40383165-40383184 | None:intergenic | 30.0% | |
| TTGTGGAATTTATGTGACTA+AGG | + | chr7_1:40383166-40383185 | None:intergenic | 30.0% | |
| AATATATTCCTCAAGCTTGA+AGG | - | chr7_1:40383451-40383470 | Msa1019180:intron | 30.0% | |
| AAAATATTCCTTCAAGCTTG+AGG | + | chr7_1:40383462-40383481 | None:intergenic | 30.0% | |
| GTAAGTAATTTAATGTCGAG+TGG | - | chr7_1:40383511-40383530 | Msa1019180:intron | 30.0% | |
| ! | GATTACATTTCCTTTTCATG+TGG | + | chr7_1:40383599-40383618 | None:intergenic | 30.0% |
| AAATCATTAAGCGAGATTAG+AGG | - | chr7_1:40383753-40383772 | Msa1019180:intron | 30.0% | |
| TTTGGACCTAATACACAATA+AGG | - | chr7_1:40383789-40383808 | Msa1019180:intron | 30.0% | |
| !! | AAAAGGCCTTATTGTGTATT+AGG | + | chr7_1:40383798-40383817 | None:intergenic | 30.0% |
| TTGCATTTATATTTCCTTGC+AGG | - | chr7_1:40383944-40383963 | Msa1019180:intron | 30.0% | |
| TAACATATATTGCTTCAGAG+AGG | - | chr7_1:40384334-40384353 | Msa1019180:intron | 30.0% | |
| TTTAGCATATCAAACATACC+CGG | + | chr7_1:40384367-40384386 | None:intergenic | 30.0% | |
| AATTGCATGATATGCAGATA+TGG | - | chr7_1:40384435-40384454 | Msa1019180:intron | 30.0% | |
| AGAGTTAATACTATATCTGC+AGG | - | chr7_1:40384664-40384683 | Msa1019180:CDS | 30.0% | |
| !! | TTATCAGTCATCACTTTTCA+GGG | + | chr7_1:40384949-40384968 | None:intergenic | 30.0% |
| !! | ATTATCAGTCATCACTTTTC+AGG | + | chr7_1:40384950-40384969 | None:intergenic | 30.0% |
| ! | TTTTAAGCTCCATCATTCAA+CGG | + | chr7_1:40385032-40385051 | None:intergenic | 30.0% |
| AATGAGAAGTTAGAGATATG+GGG | - | chr7_1:40385098-40385117 | Msa1019180:intron | 30.0% | |
| !! | TGGAAGTAAAACGGATTATA+TGG | - | chr7_1:40385154-40385173 | Msa1019180:intron | 30.0% |
| GTTCATCATTCAAAGTGAAA+GGG | - | chr7_1:40385271-40385290 | Msa1019180:intron | 30.0% | |
| AATCATTGGAGAGAAACATT+AGG | - | chr7_1:40385546-40385565 | Msa1019180:CDS | 30.0% | |
| !!! | GTATATGGTTTTAGCATGTA+AGG | - | chr7_1:40385612-40385631 | Msa1019180:CDS | 30.0% |
| !! | CTTTCTTTAGCTCTAGTTAT+TGG | + | chr7_1:40385688-40385707 | None:intergenic | 30.0% |
| AAGCCTAGATACTTCAAAAA+TGG | - | chr7_1:40385861-40385880 | Msa1019180:intron | 30.0% | |
| !!! | CTTCCATTTTTGAAGTATCT+AGG | + | chr7_1:40385867-40385886 | None:intergenic | 30.0% |
| ! | CTTCAAAAATGGAAGAGTAT+CGG | - | chr7_1:40385872-40385891 | Msa1019180:intron | 30.0% |
| TAAAGACACAACTATCCATT+TGG | - | chr7_1:40386023-40386042 | Msa1019180:intron | 30.0% | |
| AGAATATATGCTGATATAGG+TGG | - | chr7_1:40386125-40386144 | Msa1019180:intron | 30.0% | |
| GAATATATGCTGATATAGGT+GGG | - | chr7_1:40386126-40386145 | Msa1019180:intron | 30.0% | |
| AATATATGCTGATATAGGTG+GGG | - | chr7_1:40386127-40386146 | Msa1019180:intron | 30.0% | |
| TATGCAAATGACTTACACTT+TGG | - | chr7_1:40386445-40386464 | Msa1019180:intron | 30.0% | |
| ATGTCGAGATCTTTAAATAC+CGG | + | chr7_1:40386598-40386617 | None:intergenic | 30.0% | |
| ATATAGACGACAATGTAAAG+TGG | + | chr7_1:40386805-40386824 | None:intergenic | 30.0% | |
| AGAAATGAGAGAGTTTGAAG+TGG | + | chr7_1:40379322-40379341 | None:intergenic | 35.0% | |
| AGAGAACAAGAAAAGGATCA+TGG | + | chr7_1:40379398-40379417 | None:intergenic | 35.0% | |
| !!! | ACAAGTTTTTGGTTCAAAGG+TGG | - | chr7_1:40379556-40379575 | Msa1019180:CDS | 35.0% |
| ! | ATCTGGGACTAATGTAGTAA+AGG | - | chr7_1:40379674-40379693 | Msa1019180:intron | 35.0% |
| ! | TCTGGGACTAATGTAGTAAA+GGG | - | chr7_1:40379675-40379694 | Msa1019180:intron | 35.0% |
| TGTTTGTGTCAGTGTTTCAT+AGG | - | chr7_1:40380001-40380020 | Msa1019180:intron | 35.0% | |
| AATTTAGGTCCTGCAATTGT+TGG | - | chr7_1:40380508-40380527 | Msa1019180:intron | 35.0% | |
| AAGTGTTTGTCATGTTGCAT+CGG | - | chr7_1:40380567-40380586 | Msa1019180:intron | 35.0% | |
| GTGAAACCTCTCAAATCAAT+TGG | + | chr7_1:40380697-40380716 | None:intergenic | 35.0% | |
| GAAGGATTCATGGAAAAAAG+AGG | + | chr7_1:40380719-40380738 | None:intergenic | 35.0% | |
| AGTATGGGAAGAGTGATAAA+GGG | + | chr7_1:40380823-40380842 | None:intergenic | 35.0% | |
| GTAAACTGTTAATAGGGATG+TGG | + | chr7_1:40380884-40380903 | None:intergenic | 35.0% | |
| !! | CCGTGTATCCAAATTTTGAT+CGG | + | chr7_1:40380937-40380956 | None:intergenic | 35.0% |
| CCGATCAAAATTTGGATACA+CGG | - | chr7_1:40380934-40380953 | Msa1019180:intron | 35.0% | |
| !! | GCTGTTTTCATAAGCTATCA+CGG | - | chr7_1:40381057-40381076 | Msa1019180:intron | 35.0% |
| AAGCTATCACGGAAAACTTA+TGG | - | chr7_1:40381068-40381087 | Msa1019180:intron | 35.0% | |
| TAAGCACTTGTGAGATTGTT+TGG | + | chr7_1:40381146-40381165 | None:intergenic | 35.0% | |
| TAACCAGACTCAAATGCAAA+AGG | + | chr7_1:40381196-40381215 | None:intergenic | 35.0% | |
| AATAGCAAAATCTCTTGCAG+AGG | - | chr7_1:40381474-40381493 | Msa1019180:intron | 35.0% | |
| TGAAATTCTTGTTGGCACAT+GGG | - | chr7_1:40381504-40381523 | Msa1019180:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr7_1:40381688-40381707 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr7_1:40381687-40381706 | Msa1019180:intron | 35.0% | |
| TTGTTTAAAAAAGGGCAACC+CGG | + | chr7_1:40381779-40381798 | None:intergenic | 35.0% | |
| TTGTTGAATAGTGGCTATAG+TGG | - | chr7_1:40381801-40381820 | Msa1019180:intron | 35.0% | |
| TGTTATAGCGTAGCAGAATT+TGG | - | chr7_1:40381824-40381843 | Msa1019180:intron | 35.0% | |
| TACAAACTGTTGTCAAACAG+CGG | - | chr7_1:40381881-40381900 | Msa1019180:intron | 35.0% | |
| !! | AAACAAACCGCTATTTTCTG+TGG | - | chr7_1:40381943-40381962 | Msa1019180:CDS | 35.0% |
| ACACAAACCACAGAAAATAG+CGG | + | chr7_1:40381953-40381972 | None:intergenic | 35.0% | |
| CCATCTTGTAACCTGAAAAA+TGG | + | chr7_1:40382202-40382221 | None:intergenic | 35.0% | |
| !!! | CCATTTTTCAGGTTACAAGA+TGG | - | chr7_1:40382199-40382218 | Msa1019180:intron | 35.0% |
| GTTACAAGATGGATCATTGA+TGG | - | chr7_1:40382210-40382229 | Msa1019180:intron | 35.0% | |
| GATTACTAAAGTGTATCCCT+TGG | - | chr7_1:40382234-40382253 | Msa1019180:intron | 35.0% | |
| !! | TCCACTTTTCTTGTACACTT+TGG | - | chr7_1:40382814-40382833 | Msa1019180:intron | 35.0% |
| TCCAAAGTGTACAAGAAAAG+TGG | + | chr7_1:40382818-40382837 | None:intergenic | 35.0% | |
| AGTGATAAAATCGCATGTAG+AGG | + | chr7_1:40382851-40382870 | None:intergenic | 35.0% | |
| AGTCAACAACCGAAATAAAC+TGG | + | chr7_1:40383098-40383117 | None:intergenic | 35.0% | |
| CATAAATTCCACAAGCTAGA+TGG | - | chr7_1:40383172-40383191 | Msa1019180:intron | 35.0% | |
| ! | TAAGTAATCCATCTAGCTTG+TGG | + | chr7_1:40383183-40383202 | None:intergenic | 35.0% |
| TTTGTCTGCTAGCAAAAAAG+AGG | + | chr7_1:40383361-40383380 | None:intergenic | 35.0% | |
| ATGAGTGATTCCACATGAAA+AGG | - | chr7_1:40383586-40383605 | Msa1019180:intron | 35.0% | |
| TCATATTGGTGTAGTTTCCA+TGG | - | chr7_1:40383627-40383646 | Msa1019180:intron | 35.0% | |
| TAGTTTCCATGGTAGAGAAA+TGG | - | chr7_1:40383638-40383657 | Msa1019180:intron | 35.0% | |
| GATGTTACTCCAATAGTTAG+AGG | - | chr7_1:40383702-40383721 | Msa1019180:CDS | 35.0% | |
| TAAGCGAGATTAGAGGTAAA+TGG | - | chr7_1:40383760-40383779 | Msa1019180:intron | 35.0% | |
| AGAGGTAAATGGTCTATCTT+TGG | - | chr7_1:40383771-40383790 | Msa1019180:intron | 35.0% | |
| AAAGATCGATCGTCATCAAA+AGG | + | chr7_1:40383815-40383834 | None:intergenic | 35.0% | |
| AATATATGTTAGAGAGAGCG+AGG | + | chr7_1:40384325-40384344 | None:intergenic | 35.0% | |
| TTAGCATATCAAACATACCC+GGG | + | chr7_1:40384366-40384385 | None:intergenic | 35.0% | |
| AAAAAATCCAAAGGGGAAGA+GGG | + | chr7_1:40384591-40384610 | None:intergenic | 35.0% | |
| !! | ACTATATCTGCAGGTATTGA+TGG | - | chr7_1:40384673-40384692 | Msa1019180:CDS | 35.0% |
| TATGTCGGATTTGATTGTAC+GGG | + | chr7_1:40384751-40384770 | None:intergenic | 35.0% | |
| GTATGTCGGATTTGATTGTA+CGG | + | chr7_1:40384752-40384771 | None:intergenic | 35.0% | |
| ! | TACATAAGTGTCATTAGAGC+TGG | - | chr7_1:40384859-40384878 | Msa1019180:intron | 35.0% |
| GAAATTTAGCCGTTGAATGA+TGG | - | chr7_1:40385020-40385039 | Msa1019180:intron | 35.0% | |
| ! | TCTCATGTTTTCAGTAGCTT+GGG | - | chr7_1:40385249-40385268 | Msa1019180:intron | 35.0% |
| GGTTCATCATTCAAAGTGAA+AGG | - | chr7_1:40385270-40385289 | Msa1019180:intron | 35.0% | |
| ATTAACTATGGGATTCGAGT+AGG | - | chr7_1:40385306-40385325 | Msa1019180:intron | 35.0% | |
| TTAACTATGGGATTCGAGTA+GGG | - | chr7_1:40385307-40385326 | Msa1019180:intron | 35.0% | |
| ATTTGTATCGCATACTACAC+TGG | + | chr7_1:40385355-40385374 | None:intergenic | 35.0% | |
| ACAAGACTAGCAATGTTGTA+TGG | - | chr7_1:40385411-40385430 | Msa1019180:CDS | 35.0% | |
| GTTGTTACACAAGACAAGAT+AGG | - | chr7_1:40385512-40385531 | Msa1019180:CDS | 35.0% | |
| !! | ATGAACTTTTTCCTCCAAGT+TGG | - | chr7_1:40385791-40385810 | Msa1019180:intron | 35.0% |
| !! | TGAACTTTTTCCTCCAAGTT+GGG | - | chr7_1:40385792-40385811 | Msa1019180:intron | 35.0% |
| ACAATGCGACACATAATAAG+AGG | + | chr7_1:40386206-40386225 | None:intergenic | 35.0% | |
| TGCAGGTAATATTATTACCC+TGG | - | chr7_1:40386381-40386400 | Msa1019180:intron | 35.0% | |
| GGGAAATGTTCATTTCAGAA+TGG | + | chr7_1:40386415-40386434 | None:intergenic | 35.0% | |
| ! | CTTTGGTGTATTTGTAACAG+AGG | - | chr7_1:40386462-40386481 | Msa1019180:intron | 35.0% |
| TTAAAGATCTCGACATTCCA+AGG | - | chr7_1:40386602-40386621 | Msa1019180:intron | 35.0% | |
| TAAAGATCTCGACATTCCAA+GGG | - | chr7_1:40386603-40386622 | Msa1019180:intron | 35.0% | |
| TGAATAGAAGAATCCGGATT+TGG | + | chr7_1:40386665-40386684 | None:intergenic | 35.0% | |
| ! | TACAGTTTGTTCGTCATCAT+AGG | + | chr7_1:40386704-40386723 | None:intergenic | 35.0% |
| TGTTCGAAGTAGTTGAGCTT+TGG | + | chr7_1:40379200-40379219 | None:intergenic | 40.0% | |
| !! | AAAAACGTTGGAAGTGTCGA+TGG | + | chr7_1:40379253-40379272 | None:intergenic | 40.0% |
| !! | TTTTGTGATGGGGTAATCCT+AGG | + | chr7_1:40380481-40380500 | None:intergenic | 40.0% |
| !!! | TTTTAAGGTACGCGATGTTG+AGG | + | chr7_1:40380611-40380630 | None:intergenic | 40.0% |
| TTGCTTGTTTGAACTGGACT+CGG | + | chr7_1:40380662-40380681 | None:intergenic | 40.0% | |
| !! | TGTAGCTTGCTTGTTTGAAC+TGG | + | chr7_1:40380668-40380687 | None:intergenic | 40.0% |
| AGTTCAAACAAGCAAGCTAC+AGG | - | chr7_1:40380667-40380686 | Msa1019180:intron | 40.0% | |
| !! | GGATTGCCAATTGATTTGAG+AGG | - | chr7_1:40380688-40380707 | Msa1019180:intron | 40.0% |
| GAGTATGGGAAGAGTGATAA+AGG | + | chr7_1:40380824-40380843 | None:intergenic | 40.0% | |
| TCAGTACATAAGCTGTTGCA+AGG | - | chr7_1:40381168-40381187 | Msa1019180:intron | 40.0% | |
| !! | GGTAAAAGGGCATTTATTGC+TGG | - | chr7_1:40381421-40381440 | Msa1019180:intron | 40.0% |
| TGATGACAATGGATATGGCT+GGG | - | chr7_1:40381450-40381469 | Msa1019180:CDS | 40.0% | |
| CTGAAATTCTTGTTGGCACA+TGG | - | chr7_1:40381503-40381522 | Msa1019180:intron | 40.0% | |
| TCTCCCTGAAACAATGTTGT+TGG | - | chr7_1:40381587-40381606 | Msa1019180:intron | 40.0% | |
| CCTCCAACAACATTGTTTCA+GGG | + | chr7_1:40381593-40381612 | None:intergenic | 40.0% | |
| CCTGAAACAATGTTGTTGGA+GGG | - | chr7_1:40381591-40381610 | Msa1019180:intron | 40.0% | |
| CTGAAACAATGTTGTTGGAG+GGG | - | chr7_1:40381592-40381611 | Msa1019180:intron | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr7_1:40381637-40381656 | Msa1019180:CDS | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr7_1:40381681-40381700 | Msa1019180:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr7_1:40381682-40381701 | Msa1019180:intron | 40.0% | |
| ATTTGACGAATCACGCAAGT+AGG | - | chr7_1:40382099-40382118 | Msa1019180:CDS | 40.0% | |
| !! | CAGGTAACTCTCCATTTTTC+AGG | - | chr7_1:40382188-40382207 | Msa1019180:intron | 40.0% |
| !! | TACATCTTCTGGGACATCTT+CGG | + | chr7_1:40382278-40382297 | None:intergenic | 40.0% |
| AAGATGTCCCAGAAGATGTA+AGG | - | chr7_1:40382278-40382297 | Msa1019180:intron | 40.0% | |
| AGATGTCCCAGAAGATGTAA+GGG | - | chr7_1:40382279-40382298 | Msa1019180:intron | 40.0% | |
| ACGTATCCCTTACATCTTCT+GGG | + | chr7_1:40382288-40382307 | None:intergenic | 40.0% | |
| AACGTATCCCTTACATCTTC+TGG | + | chr7_1:40382289-40382308 | None:intergenic | 40.0% | |
| AAAGCTAATAAGCGCTATGC+TGG | - | chr7_1:40382382-40382401 | Msa1019180:intron | 40.0% | |
| !! | GTCGTTTATTTTCTGCTCGT+AGG | - | chr7_1:40382576-40382595 | Msa1019180:intron | 40.0% |
| ! | TCCTGTTTCTCATGTGTCAA+AGG | - | chr7_1:40382880-40382899 | Msa1019180:intron | 40.0% |
| TCCTTTGACACATGAGAAAC+AGG | + | chr7_1:40382884-40382903 | None:intergenic | 40.0% | |
| TCTCATGTGTCAAAGGAATG+TGG | - | chr7_1:40382887-40382906 | Msa1019180:intron | 40.0% | |
| ! | TTTTTAAACGGCAGCACTGT+TGG | - | chr7_1:40382917-40382936 | Msa1019180:intron | 40.0% |
| ! | TTTTAAACGGCAGCACTGTT+GGG | - | chr7_1:40382918-40382937 | Msa1019180:intron | 40.0% |
| CATGAACCATTTCTCTACCA+TGG | + | chr7_1:40383647-40383666 | None:intergenic | 40.0% | |
| ACTCCAATAGTTAGAGGTAG+AGG | - | chr7_1:40383708-40383727 | Msa1019180:CDS | 40.0% | |
| CTCCAATAGTTAGAGGTAGA+GGG | - | chr7_1:40383709-40383728 | Msa1019180:CDS | 40.0% | |
| TTCCCTCTACCTCTAACTAT+TGG | + | chr7_1:40383714-40383733 | None:intergenic | 40.0% | |
| AGATTCAACAACTTCCTGCA+AGG | + | chr7_1:40383961-40383980 | None:intergenic | 40.0% | |
| AACTATTGTCCGAGACATCT+CGG | - | chr7_1:40384128-40384147 | Msa1019180:intron | 40.0% | |
| ATATCCTTTCCGAGATGTCT+CGG | + | chr7_1:40384140-40384159 | None:intergenic | 40.0% | |
| TTCCTTCCAATCATGAACCA+AGG | - | chr7_1:40384211-40384230 | Msa1019180:intron | 40.0% | |
| AACTTGCCTTGGTTCATGAT+TGG | + | chr7_1:40384220-40384239 | None:intergenic | 40.0% | |
| CTTAGGTAATGAACTTGCCT+TGG | + | chr7_1:40384231-40384250 | None:intergenic | 40.0% | |
| !!! | CACTGCTCTGTTTTGGTTAT+AGG | - | chr7_1:40384294-40384313 | Msa1019180:intron | 40.0% |
| !!! | TGCTCTGTTTTGGTTATAGG+TGG | - | chr7_1:40384297-40384316 | Msa1019180:intron | 40.0% |
| TGCATGATATGCAGATATGG+TGG | - | chr7_1:40384438-40384457 | Msa1019180:intron | 40.0% | |
| GCATGATATGCAGATATGGT+GGG | - | chr7_1:40384439-40384458 | Msa1019180:intron | 40.0% | |
| CATGATATGCAGATATGGTG+GGG | - | chr7_1:40384440-40384459 | Msa1019180:intron | 40.0% | |
| ATGATATGCAGATATGGTGG+GGG | - | chr7_1:40384441-40384460 | Msa1019180:intron | 40.0% | |
| AGGTTAGGAACACGAAAGTA+CGG | + | chr7_1:40384566-40384585 | None:intergenic | 40.0% | |
| AAAAATCCAAAGGGGAAGAG+GGG | + | chr7_1:40384590-40384609 | None:intergenic | 40.0% | |
| CAAAAAATCCAAAGGGGAAG+AGG | + | chr7_1:40384592-40384611 | None:intergenic | 40.0% | |
| GGACAAGTCTTGGAAATACT+TGG | - | chr7_1:40385119-40385138 | Msa1019180:intron | 40.0% | |
| ATACTTGGTTTCTGCTCAAG+TGG | - | chr7_1:40385134-40385153 | Msa1019180:intron | 40.0% | |
| CTGCTCAAGTGGAAGTAAAA+CGG | - | chr7_1:40385145-40385164 | Msa1019180:intron | 40.0% | |
| ! | GTCTCATGTTTTCAGTAGCT+TGG | - | chr7_1:40385248-40385267 | Msa1019180:intron | 40.0% |
| ! | GAGAAGACTTGTAGAAGCAT+TGG | - | chr7_1:40385634-40385653 | Msa1019180:CDS | 40.0% |
| !! | AGACTTGTAGAAGCATTGGT+AGG | - | chr7_1:40385638-40385657 | Msa1019180:CDS | 40.0% |
| !! | GACTTGTAGAAGCATTGGTA+GGG | - | chr7_1:40385639-40385658 | Msa1019180:CDS | 40.0% |
| !! | ACTTGTAGAAGCATTGGTAG+GGG | - | chr7_1:40385640-40385659 | Msa1019180:CDS | 40.0% |
| AGTTATTGGACTATCCCTCT+TGG | + | chr7_1:40385674-40385693 | None:intergenic | 40.0% | |
| TGACAAGCAAAAACCCAACT+TGG | + | chr7_1:40385808-40385827 | None:intergenic | 40.0% | |
| ! | ATAAGAAGCATATCGGTCTC+AGG | + | chr7_1:40385911-40385930 | None:intergenic | 40.0% |
| TCGCATTGTACTATGTATCC+AGG | - | chr7_1:40386217-40386236 | Msa1019180:intron | 40.0% | |
| AGTATGTCAACTGAAAAGCC+TGG | + | chr7_1:40386238-40386257 | None:intergenic | 40.0% | |
| TTCTTTCTGTAGTGGTGCAT+TGG | + | chr7_1:40386356-40386375 | None:intergenic | 40.0% | |
| GCATGTAGTTCTTTCTGTAG+TGG | + | chr7_1:40386364-40386383 | None:intergenic | 40.0% | |
| CTACAGAAAGAACTACATGC+AGG | - | chr7_1:40386364-40386383 | Msa1019180:intron | 40.0% | |
| TCAGAATGGAAGAATCTCCA+GGG | + | chr7_1:40386401-40386420 | None:intergenic | 40.0% | |
| TTCAGAATGGAAGAATCTCC+AGG | + | chr7_1:40386402-40386421 | None:intergenic | 40.0% | |
| TGGTGTATTTGTAACAGAGG+AGG | - | chr7_1:40386465-40386484 | Msa1019180:intron | 40.0% | |
| GTATTTGTAACAGAGGAGGT+AGG | - | chr7_1:40386469-40386488 | Msa1019180:intron | 40.0% | |
| GCTGTCATATACGTGGATAA+CGG | - | chr7_1:40386541-40386560 | Msa1019180:intron | 40.0% | |
| CAATTTCAATGTTGGTCCCT+TGG | + | chr7_1:40386622-40386641 | None:intergenic | 40.0% | |
| ! | GAGAGTCCTGACTTTTGAAT+GGG | - | chr7_1:40386843-40386862 | Msa1019180:five_prime_UTR | 40.0% |
| TCACATGTCCATTGTCGTGT+TGG | + | chr7_1:40379908-40379927 | None:intergenic | 45.0% | |
| CGATTGCAATGTCAAGACCT+AGG | - | chr7_1:40380461-40380480 | Msa1019180:intron | 45.0% | |
| TTAGGTCCTGCAATTGTTGG+AGG | - | chr7_1:40380511-40380530 | Msa1019180:intron | 45.0% | |
| ! | GTTGGCTCATGTGCTAAACT+AGG | - | chr7_1:40380544-40380563 | Msa1019180:intron | 45.0% |
| ! | GAGCCTTTTGCATTTGAGTC+TGG | - | chr7_1:40381190-40381209 | Msa1019180:intron | 45.0% |
| !! | AAGGGCATTTATTGCTGGAG+TGG | - | chr7_1:40381426-40381445 | Msa1019180:intron | 45.0% |
| GTGGCTGATGACAATGGATA+TGG | - | chr7_1:40381445-40381464 | Msa1019180:CDS | 45.0% | |
| CTGATGACAATGGATATGGC+TGG | - | chr7_1:40381449-40381468 | Msa1019180:CDS | 45.0% | |
| GCAGGAGCTGAAATTCTTGT+TGG | - | chr7_1:40381496-40381515 | Msa1019180:intron | 45.0% | |
| CCCTGAAACAATGTTGTTGG+AGG | - | chr7_1:40381590-40381609 | Msa1019180:intron | 45.0% | |
| CCCTCCAACAACATTGTTTC+AGG | + | chr7_1:40381594-40381613 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr7_1:40381643-40381662 | Msa1019180:CDS | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr7_1:40381644-40381663 | Msa1019180:CDS | 45.0% | |
| CGTACAATACGCCAAATGGT+GGG | - | chr7_1:40381713-40381732 | Msa1019180:intron | 45.0% | |
| ! | CGTCAAATTTTCCACGTCGT+AGG | + | chr7_1:40382087-40382106 | None:intergenic | 45.0% |
| GTGTCATAGACTGCATCCAA+GGG | + | chr7_1:40382253-40382272 | None:intergenic | 45.0% | |
| AGTGTCATAGACTGCATCCA+AGG | + | chr7_1:40382254-40382273 | None:intergenic | 45.0% | |
| !! | ACATCTTCTGGGACATCTTC+GGG | + | chr7_1:40382277-40382296 | None:intergenic | 45.0% |
| GCTATGCTGGAGCTTCAAAT+TGG | - | chr7_1:40382395-40382414 | Msa1019180:intron | 45.0% | |
| AGCTTCAAATTGGACTGTCC+AGG | - | chr7_1:40382405-40382424 | Msa1019180:intron | 45.0% | |
| GGTCAGAGATAAGTGGAAGA+TGG | + | chr7_1:40383207-40383226 | None:intergenic | 45.0% | |
| ! | CAGGTTTGGTCAGAGATAAG+TGG | + | chr7_1:40383214-40383233 | None:intergenic | 45.0% |
| CCTACTCCACCTATTGCTAA+GGG | - | chr7_1:40383839-40383858 | Msa1019180:CDS | 45.0% | |
| ACAAGCAAGCCCTTAGCAAT+AGG | + | chr7_1:40383851-40383870 | None:intergenic | 45.0% | |
| ! | CTTGTGCACTCACTTGCTAA+CGG | - | chr7_1:40384011-40384030 | Msa1019180:CDS | 45.0% |
| TGCCTTGGTTCATGATTGGA+AGG | + | chr7_1:40384216-40384235 | None:intergenic | 45.0% | |
| ! | CTGTTCTCACTGCTCTGTTT+TGG | - | chr7_1:40384287-40384306 | Msa1019180:intron | 45.0% |
| GCTTCAGAGAGGATTATTCC+CGG | - | chr7_1:40384345-40384364 | Msa1019180:intron | 45.0% | |
| CTTCAGAGAGGATTATTCCC+GGG | - | chr7_1:40384346-40384365 | Msa1019180:intron | 45.0% | |
| GAGTTCTGCTAAAGCTGCTT+TGG | - | chr7_1:40384467-40384486 | Msa1019180:intron | 45.0% | |
| AAAATCCAAAGGGGAAGAGG+GGG | + | chr7_1:40384589-40384608 | None:intergenic | 45.0% | |
| AGAGATATGGGGACAAGTCT+TGG | - | chr7_1:40385109-40385128 | Msa1019180:intron | 45.0% | |
| GAGTAGGGAGGATGAAATGT+AGG | - | chr7_1:40385322-40385341 | Msa1019180:intron | 45.0% | |
| TAGGGGAGATTAGACCAAGA+GGG | - | chr7_1:40385657-40385676 | Msa1019180:CDS | 45.0% | |
| CAAGCAAAAACCCAACTTGG+AGG | + | chr7_1:40385805-40385824 | None:intergenic | 45.0% | |
| !! | AATGGAAGAGTATCGGTGTC+CGG | - | chr7_1:40385879-40385898 | Msa1019180:intron | 45.0% |
| TTTCAATGGCTAGGTCCACT+TGG | - | chr7_1:40386274-40386293 | Msa1019180:intron | 45.0% | |
| AACCAATTGCTTTCGCAGCA+CGG | + | chr7_1:40386303-40386322 | None:intergenic | 45.0% | |
| CCAGTGATAGCTGATGCTAA+GGG | + | chr7_1:40386520-40386539 | None:intergenic | 45.0% | |
| ACCAGTGATAGCTGATGCTA+AGG | + | chr7_1:40386521-40386540 | None:intergenic | 45.0% | |
| !! | GATAACGGACTAAACGCCAT+GGG | - | chr7_1:40386556-40386575 | Msa1019180:intron | 45.0% |
| ! | GGAGAGTCCTGACTTTTGAA+TGG | - | chr7_1:40386842-40386861 | Msa1019180:five_prime_UTR | 45.0% |
| ! | CTTTTGAATGGGCGTGTGAA+TGG | - | chr7_1:40386854-40386873 | Msa1019180:five_prime_UTR | 45.0% |
| !! | AAATTAATTTAAAAATCTAT+TGG | + | chr7_1:40382516-40382535 | None:intergenic | 5.0% |
| AGCACGACACTTCTCATCGA+AGG | - | chr7_1:40379867-40379886 | Msa1019180:intron | 50.0% | |
| ! | ATTGTCGTGTTGGCAGACAC+TGG | + | chr7_1:40379898-40379917 | None:intergenic | 50.0% |
| AGTGTCTGCCAACACGACAA+TGG | - | chr7_1:40379897-40379916 | Msa1019180:intron | 50.0% | |
| CAACACTGACACGTCGACAA+CGG | + | chr7_1:40379965-40379984 | None:intergenic | 50.0% | |
| CTGACACAAACACGAACACC+AGG | + | chr7_1:40379993-40380012 | None:intergenic | 50.0% | |
| TCCTGCAATTGTTGGAGGCA+GGG | - | chr7_1:40380516-40380535 | Msa1019180:intron | 50.0% | |
| GTTGGAGGCAGGGTTAAAGT+TGG | - | chr7_1:40380526-40380545 | Msa1019180:intron | 50.0% | |
| GCAAAATCTCTTGCAGAGGC+AGG | - | chr7_1:40381478-40381497 | Msa1019180:intron | 50.0% | |
| TGTTGTTGGAGGGGTAACCT+TGG | - | chr7_1:40381601-40381620 | Msa1019180:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr7_1:40381621-40381640 | None:intergenic | 50.0% | |
| AAGGTCACGGGTTCAAGTCA+TGG | - | chr7_1:40381656-40381675 | Msa1019180:intron | 50.0% | |
| GCTGCGTACAATACGCCAAA+TGG | - | chr7_1:40381709-40381728 | Msa1019180:intron | 50.0% | |
| GCGTACAATACGCCAAATGG+TGG | - | chr7_1:40381712-40381731 | Msa1019180:intron | 50.0% | |
| TTTGAGTCTAGCCTACGACG+TGG | - | chr7_1:40382073-40382092 | Msa1019180:intron | 50.0% | |
| GCCTACTCCACCTATTGCTA+AGG | - | chr7_1:40383838-40383857 | Msa1019180:CDS | 50.0% | |
| CCCTTAGCAATAGGTGGAGT+AGG | + | chr7_1:40383842-40383861 | None:intergenic | 50.0% | |
| AGCAAGCCCTTAGCAATAGG+TGG | + | chr7_1:40383848-40383867 | None:intergenic | 50.0% | |
| TTGTCCGAGACATCTCGGAA+AGG | - | chr7_1:40384133-40384152 | Msa1019180:intron | 50.0% | |
| !!! | CAGGTGCTTGCTTTTGAAGC+TGG | - | chr7_1:40384625-40384644 | Msa1019180:CDS | 50.0% |
| ACTATGGGATTCGAGTAGGG+AGG | - | chr7_1:40385310-40385329 | Msa1019180:intron | 50.0% | |
| GTAGGGGAGATTAGACCAAG+AGG | - | chr7_1:40385656-40385675 | Msa1019180:CDS | 50.0% | |
| CCCTTAGCATCAGCTATCAC+TGG | - | chr7_1:40386517-40386536 | Msa1019180:intron | 50.0% | |
| !! | CACTGGTGCTGTCATATACG+TGG | - | chr7_1:40386534-40386553 | Msa1019180:intron | 50.0% |
| !! | GGATAACGGACTAAACGCCA+TGG | - | chr7_1:40386555-40386574 | Msa1019180:intron | 50.0% |
| CACACGCCCATTCAAAAGTC+AGG | + | chr7_1:40386852-40386871 | None:intergenic | 50.0% | |
| ! | CGTGTCAGTGTTGTTGTGCC+TGG | - | chr7_1:40379972-40379991 | Msa1019180:intron | 55.0% |
| GTCCTGCAATTGTTGGAGGC+AGG | - | chr7_1:40380515-40380534 | Msa1019180:intron | 55.0% | |
| ACCCTGCCTCCAACAATTGC+AGG | + | chr7_1:40380520-40380539 | None:intergenic | 55.0% | |
| ATCGGCAAAACCCTTCCAGC+TGG | - | chr7_1:40380585-40380604 | Msa1019180:intron | 55.0% | |
| GATGTTGAGGCCAGCTGGAA+GGG | + | chr7_1:40380598-40380617 | None:intergenic | 55.0% | |
| GCTGGAGTGGCTGATGACAA+TGG | - | chr7_1:40381439-40381458 | Msa1019180:CDS | 55.0% | |
| ! | CTCACTTGCTAACGGACCAG+AGG | - | chr7_1:40384019-40384038 | Msa1019180:CDS | 55.0% |
| TATCGGTCTCAGGTACGTGC+CGG | + | chr7_1:40385901-40385920 | None:intergenic | 55.0% | |
| AGCCGTGCTGCGAAAGCAAT+TGG | - | chr7_1:40386298-40386317 | Msa1019180:intron | 55.0% | |
| !! | AGGCAACGCTGCTGCTTTCT+TGG | - | chr7_1:40386489-40386508 | Msa1019180:intron | 55.0% |
| GGACTAAACGCCATGGGAGT+TGG | - | chr7_1:40386562-40386581 | Msa1019180:intron | 55.0% | |
| !! | ACTGTCGACTCCAACTCCCA+TGG | + | chr7_1:40386575-40386594 | None:intergenic | 55.0% |
| CGATGTTGAGGCCAGCTGGA+AGG | + | chr7_1:40380599-40380618 | None:intergenic | 60.0% | |
| TACGCGATGTTGAGGCCAGC+TGG | + | chr7_1:40380603-40380622 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr7_1:40381610-40381629 | Msa1019180:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr7_1:40381725-40381744 | Msa1019180:intron | 60.0% |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr7_1:40381752-40381771 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr7_1:40381753-40381772 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr7_1:40381757-40381776 | Msa1019180:CDS | 60.0% | |
| ! | CATAGAGGAGCGCATCTCGC+TGG | - | chr7_1:40382661-40382680 | Msa1019180:intron | 60.0% |
| AAGGGGAAGAGGGGGAGGTT+AGG | + | chr7_1:40384581-40384600 | None:intergenic | 60.0% | |
| AACCTCCCCCTCTTCCCCTT+TGG | - | chr7_1:40384581-40384600 | Msa1019180:intron | 60.0% | |
| ATCCAAAGGGGAAGAGGGGG+AGG | + | chr7_1:40384586-40384605 | None:intergenic | 60.0% | |
| TTCGCAGCACGGCTTCCAAG+TGG | + | chr7_1:40386292-40386311 | None:intergenic | 60.0% | |
| GGGAGTTGGAGTCGACAGTC+CGG | - | chr7_1:40386576-40386595 | Msa1019180:intron | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr7_1:40381727-40381746 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr7_1:40381740-40381759 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr7_1:40381741-40381760 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr7_1:40381740-40381759 | Msa1019180:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr7_1:40381741-40381760 | Msa1019180:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr7_1:40381758-40381777 | Msa1019180:CDS | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr7_1:40381742-40381761 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr7_1:40381746-40381765 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr7_1:40381747-40381766 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 40379183 | 40386936 | 40379183 | ID=Msa1019180;Name=Msa1019180 |
| chr7_1 | mRNA | 40379183 | 40386936 | 40379183 | ID=Msa1019180-mRNA-1;Parent=Msa1019180;Name=Msa1019180-mRNA-1;_AED=0.16;_eAED=0.16;_QI=230|0.92|0.92|1|0.84|0.71|14|250|375 |
| chr7_1 | exon | 40379183 | 40379289 | 40379183 | ID=Msa1019180-mRNA-1:exon:7844;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40379340 | 40379637 | 40379340 | ID=Msa1019180-mRNA-1:exon:7843;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40379734 | 40379832 | 40379734 | ID=Msa1019180-mRNA-1:exon:7842;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40381434 | 40381491 | 40381434 | ID=Msa1019180-mRNA-1:exon:7841;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40381616 | 40381667 | 40381616 | ID=Msa1019180-mRNA-1:exon:7840;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40381752 | 40381803 | 40381752 | ID=Msa1019180-mRNA-1:exon:7839;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40381938 | 40381998 | 40381938 | ID=Msa1019180-mRNA-1:exon:7838;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40382079 | 40382153 | 40382079 | ID=Msa1019180-mRNA-1:exon:7837;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40383693 | 40383740 | 40383693 | ID=Msa1019180-mRNA-1:exon:7836;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40383825 | 40383909 | 40383825 | ID=Msa1019180-mRNA-1:exon:7835;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40384003 | 40384058 | 40384003 | ID=Msa1019180-mRNA-1:exon:7834;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40384588 | 40384697 | 40384588 | ID=Msa1019180-mRNA-1:exon:7833;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40385410 | 40385723 | 40385410 | ID=Msa1019180-mRNA-1:exon:7832;Parent=Msa1019180-mRNA-1 |
| chr7_1 | exon | 40386744 | 40386936 | 40386744 | ID=Msa1019180-mRNA-1:exon:7831;Parent=Msa1019180-mRNA-1 |
| chr7_1 | five_prime_UTR | 40386744 | 40386936 | 40386744 | ID=Msa1019180-mRNA-1:five_prime_utr;Parent=Msa1019180-mRNA-1 |
| chr7_1 | five_prime_UTR | 40385687 | 40385723 | 40385687 | ID=Msa1019180-mRNA-1:five_prime_utr;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40385410 | 40385686 | 40385410 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40384588 | 40384697 | 40384588 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40384003 | 40384058 | 40384003 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40383825 | 40383909 | 40383825 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40383693 | 40383740 | 40383693 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40382079 | 40382153 | 40382079 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40381938 | 40381998 | 40381938 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40381752 | 40381803 | 40381752 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40381616 | 40381667 | 40381616 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40381434 | 40381491 | 40381434 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40379734 | 40379832 | 40379734 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | CDS | 40379483 | 40379637 | 40379483 | ID=Msa1019180-mRNA-1:cds;Parent=Msa1019180-mRNA-1 |
| chr7_1 | three_prime_UTR | 40379340 | 40379482 | 40379340 | ID=Msa1019180-mRNA-1:three_prime_utr;Parent=Msa1019180-mRNA-1 |
| chr7_1 | three_prime_UTR | 40379183 | 40379289 | 40379183 | ID=Msa1019180-mRNA-1:three_prime_utr;Parent=Msa1019180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
