AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0930040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0930040 MtrunA17_Chr8g0392761 87.226 274 19 4 1 266 1 266 1.67e-141 419
Msa0930040 MtrunA17_Chr6g0477881 35.135 481 216 16 302 718 55 503 2.79e-65 237
Msa0930040 MtrunA17_Chr6g0477921 35.135 481 216 16 302 718 55 503 3.04e-65 237
Msa0930040 MtrunA17_Chr7g0266401 56.962 158 62 3 109 266 246 397 1.25e-48 177
Msa0930040 MtrunA17_Chr1g0196971 47.436 156 76 3 114 269 215 364 4.00e-39 149
Msa0930040 MtrunA17_Chr7g0267591 42.405 158 84 3 114 266 116 271 6.12e-37 140
Msa0930040 MtrunA17_Chr1g0171871 43.226 155 81 2 118 266 203 356 1.96e-35 138
Msa0930040 MtrunA17_Chr3g0083531 45.890 146 75 2 121 266 112 253 2.86e-35 135
Msa0930040 MtrunA17_Chr8g0388481 45.625 160 78 3 113 266 204 360 3.81e-34 134
Msa0930040 MtrunA17_Chr8g0352771 46.259 147 72 4 123 266 105 247 3.01e-32 126
Msa0930040 MtrunA17_Chr5g0437471 45.946 148 74 3 119 266 90 231 1.01e-31 124
Msa0930040 MtrunA17_Chr7g0256501 41.718 163 87 6 106 266 261 417 1.03e-31 129
Msa0930040 MtrunA17_Chr7g0217121 35.636 275 112 8 55 266 152 424 1.52e-31 128
Msa0930040 MtrunA17_Chr3g0105871 45.270 148 74 3 120 266 84 225 3.69e-31 122
Msa0930040 MtrunA17_Chr6g0453031 32.646 291 116 9 58 268 127 417 3.69e-28 118
Msa0930040 MtrunA17_Chr5g0431071 41.711 187 100 6 81 266 68 246 1.05e-26 110
Msa0930040 MtrunA17_Chr3g0113971 38.298 141 81 2 126 266 93 227 3.61e-25 105
Msa0930040 MtrunA17_Chr6g0462901 30.412 194 132 2 515 707 370 561 7.21e-22 102
Msa0930040 MtrunA17_Chr3g0089011 37.500 144 76 3 136 265 2 145 3.74e-20 88.2
Msa0930040 MtrunA17_Chr2g0281381 26.009 223 159 3 515 733 326 546 4.58e-19 92.8
Msa0930040 MtrunA17_Chr3g0104461 33.333 132 86 2 512 642 15 145 7.05e-18 84.7
Msa0930040 MtrunA17_Chr4g0069321 28.571 210 131 5 504 707 144 340 1.20e-16 84.7
Msa0930040 MtrunA17_Chr8g0373261 23.371 445 296 14 288 707 48 472 1.42e-14 78.2
Msa0930040 MtrunA17_Chr1g0193171 31.034 145 96 2 553 695 185 327 2.16e-14 77.4
Msa0930040 MtrunA17_Chr7g0231781 48.000 75 32 2 659 729 1 72 1.02e-13 71.6
Msa0930040 MtrunA17_Chr5g0413371 27.979 193 123 6 503 684 329 516 9.65e-13 72.0
Msa0930040 MtrunA17_Chr8g0338961 23.389 419 273 16 305 707 39 425 9.89e-13 71.6
Msa0930040 MtrunA17_Chr7g0275141 23.567 157 116 2 553 707 22 176 6.56e-12 69.3
Msa0930040 MtrunA17_Chr4g0049281 24.528 159 116 2 551 707 6 162 1.35e-11 68.2
Msa0930040 MtrunA17_Chr5g0412021 42.353 85 43 2 167 245 4 88 9.82e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0930040 AT4G10630.1 53.049 328 90 11 1 266 1 326 1.05e-91 292
Msa0930040 AT1G32760.1 51.780 309 100 12 2 266 3 306 4.43e-71 237
Msa0930040 AT5G03870.1 43.269 208 99 3 61 266 186 376 2.28e-39 150
Msa0930040 AT1G64500.1 49.045 157 76 2 114 266 202 358 2.02e-38 147
Msa0930040 AT5G39865.1 35.827 254 117 8 55 266 132 381 7.05e-37 144
Msa0930040 AT5G06470.1 45.860 157 77 3 114 266 79 231 8.75e-35 133
Msa0930040 AT5G13810.1 43.478 161 85 3 106 266 111 265 4.01e-34 132
Msa0930040 AT5G01420.1 43.860 171 86 4 103 269 232 396 1.13e-33 134
Msa0930040 AT3G57070.1 43.624 149 78 3 120 266 264 408 3.46e-32 130
Msa0930040 AT5G58530.1 44.375 160 74 3 116 266 105 258 4.43e-32 126
Msa0930040 AT2G41330.1 44.218 147 77 3 121 266 251 393 8.27e-32 129
Msa0930040 AT3G28850.1 42.105 171 73 4 122 266 249 419 2.17e-30 125
Msa0930040 AT3G11773.1 41.135 141 76 3 126 266 9 142 3.98e-25 102
Msa0930040 AT3G11773.2 41.667 108 56 3 159 266 92 192 5.53e-17 80.9
Msa0930040 AT1G06740.1 25.431 232 148 5 497 707 90 317 1.66e-15 81.3
Msa0930040 AT3G05850.1 27.439 164 114 3 533 694 187 347 1.51e-11 68.6

Find 225 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCAAGAGTTAATGATTTC+AGG 0.178045 6_2:-78826709 None:intergenic
TTACAGAAACAATATAATTA+TGG 0.208573 6_2:+78829361 Msa0930040:CDS
TGTAGTGATTGTAATGAAAA+TGG 0.257897 6_2:+78827303 Msa0930040:CDS
TCATCTCTATTTCTTTGATC+AGG 0.261830 6_2:-78829799 None:intergenic
TCAAAGCAAGGTTTAGGTTT+AGG 0.267652 6_2:-78826816 None:intergenic
AAAACCCGGTTCGGCTCTTT+CGG 0.272734 6_2:+78826840 Msa0930040:CDS
CAGCTGCATACCTCCATATC+AGG 0.276314 6_2:-78830395 None:intergenic
AGACAGAAATTTACCTTGTT+TGG 0.279776 6_2:-78832323 None:intergenic
ACCTTGTTTGGTGGTTTAAA+TGG 0.282154 6_2:-78832311 None:intergenic
TTAGCAGGTTGAGACTTCTT+TGG 0.287926 6_2:-78832101 None:intergenic
TGCCCTCTTCTTTGCTCTCC+AGG 0.289167 6_2:-78830334 None:intergenic
TTTGTTGGGAGAGGTTCTTC+AGG 0.290766 6_2:+78827146 Msa0930040:CDS
TTACAACTGCTATTCTTAAC+AGG 0.292082 6_2:-78829577 None:intergenic
ATAAATATTCTTACCTTTCA+AGG 0.303104 6_2:-78829055 None:intergenic
AGTGAAGAAGAGAGAGGTTT+AGG 0.306900 6_2:+78829709 Msa0930040:CDS
AAAATGACAATGAAAGGATT+AGG 0.322350 6_2:+78830055 Msa0930040:CDS
ATCATGGAGGGTTATTTGTT+AGG 0.323631 6_2:+78829242 Msa0930040:CDS
TTCTCAGTACACATTATCTT+TGG 0.329129 6_2:-78830243 None:intergenic
GACGGTTGGGATTGCGCCTT+TGG 0.330563 6_2:+78828993 Msa0930040:CDS
TACAGAAACAATATAATTAT+GGG 0.341529 6_2:+78829362 Msa0930040:CDS
GATGGTGAGTAAACAGAAAC+AGG 0.351897 6_2:+78827260 Msa0930040:CDS
ACCACTTTCTTCTCTCCGTT+CGG 0.362950 6_2:-78826886 None:intergenic
TCAGATTCTTCTATACAGTT+AGG 0.369853 6_2:-78829553 None:intergenic
CCGATCCGAAAGAGCCGAAC+CGG 0.370965 6_2:-78826845 None:intergenic
GAATCTGGTGCATTTGCATT+TGG 0.372377 6_2:-78832188 None:intergenic
GAATCTGGTGCATTTGCATT+TGG 0.372377 6_2:-78832242 None:intergenic
TTAGGAATGGAGGATGGGTT+TGG 0.373036 6_2:+78829727 Msa0930040:CDS
AAGTTGATTTCAAGTTAGTT+AGG 0.378965 6_2:+78829419 Msa0930040:CDS
CAAGGTTTAGGTTTAGGTTT+GGG 0.381455 6_2:-78826810 None:intergenic
TCATGGAGGGTTATTTGTTA+GGG 0.386460 6_2:+78829243 Msa0930040:CDS
CAAAACAGTATACCCTGATA+TGG 0.389980 6_2:+78830382 Msa0930040:CDS
TAAGTCCCTAGCTGAGTTCA+AGG 0.393590 6_2:+78829981 Msa0930040:CDS
CCTGCAACAACTGCTGTTCA+TGG 0.393980 6_2:+78832269 Msa0930040:CDS
GTCCAAGATATGAAAAGTTT+AGG 0.396244 6_2:+78829911 Msa0930040:CDS
AGAGGTTTAGGAATGGAGGA+TGG 0.397345 6_2:+78829721 Msa0930040:CDS
GATGATTCTGATGAGGAAAA+AGG 0.403791 6_2:+78829889 Msa0930040:CDS
CACCTGAAATCATTAACTCT+TGG 0.404093 6_2:+78826707 Msa0930040:CDS
AGGTGCCGAACTCGTCTTCA+TGG 0.405385 6_2:-78826558 None:intergenic
TCTAATTATCTCATGATTGA+AGG 0.411595 6_2:+78829760 Msa0930040:CDS
TCTTTAACTTCCACCACTTA+CGG 0.416969 6_2:+78826610 Msa0930040:CDS
GGTTGTGGAAGAGGGTTTGT+TGG 0.419535 6_2:+78827131 Msa0930040:CDS
TTGTTGGGAGAGGTTCTTCA+GGG 0.419600 6_2:+78827147 Msa0930040:CDS
CATCTCTATTTCTTTGATCA+GGG 0.423935 6_2:-78829798 None:intergenic
GCAAGGTTTAGGTTTAGGTT+TGG 0.424192 6_2:-78826811 None:intergenic
GTTGTGGAAGAGGGTTTGTT+GGG 0.424770 6_2:+78827132 Msa0930040:CDS
GGAAGAGGGTTTGTTGGGAG+AGG 0.425439 6_2:+78827137 Msa0930040:CDS
AAATGACAATGAAAGGATTA+GGG 0.425461 6_2:+78830056 Msa0930040:CDS
GATGTTGAAGGTTGTGGAAG+AGG 0.428644 6_2:+78827122 Msa0930040:CDS
GGGTGAGAAGCGGAAGCTTT+CGG 0.431717 6_2:-78826752 None:intergenic
ATAATTATGGGAAAAGGTAT+AGG 0.433508 6_2:+78829374 Msa0930040:CDS
TTCAGGTGGTTCGGAGCGGA+GGG 0.434145 6_2:-78826692 None:intergenic
AGTTGTGGAATTTGACGGTT+GGG 0.435788 6_2:+78828980 Msa0930040:CDS
GTTAATGATTTCAGGTGGTT+CGG 0.436171 6_2:-78826701 None:intergenic
GAGGGTTATTTGTTAGGGAC+TGG 0.437017 6_2:+78829248 Msa0930040:CDS
GTGGAGGAGTGGGTGGATCG+AGG 0.437573 6_2:-78826645 None:intergenic
GATGATGGGGTTGAAATAGA+TGG 0.437656 6_2:+78829829 Msa0930040:CDS
ACCTGAAATCATTAACTCTT+GGG 0.437778 6_2:+78826708 Msa0930040:CDS
AGAGAGAGGTTTAGGAATGG+AGG 0.442006 6_2:+78829717 Msa0930040:CDS
TGTTAAGAATAGCAGTTGTA+AGG 0.442673 6_2:+78829579 Msa0930040:CDS
CGAGAAGATGGTGGAGGAGT+GGG 0.445237 6_2:-78826655 None:intergenic
ATGTGATCAGCAGTTGTTGC+AGG 0.446473 6_2:-78832161 None:intergenic
ATGTGATCAGCAGTTGTTGC+AGG 0.446473 6_2:-78832215 None:intergenic
CCTGCACATGCTCCTGCTAC+TGG 0.447312 6_2:+78832065 Msa0930040:CDS
GATGAAGATTCTGATGTTAG+AGG 0.447382 6_2:+78829670 Msa0930040:CDS
AACAATATAATTATGGGAAA+AGG 0.448596 6_2:+78829368 Msa0930040:CDS
ATGTTGAAGGTTGTGGAAGA+GGG 0.449891 6_2:+78827123 Msa0930040:CDS
CATTAACTCTTGGGAACTCA+TGG 0.451980 6_2:+78826717 Msa0930040:CDS
TTTGGTTGAGACTTCTTAGC+AGG 0.452126 6_2:-78832116 None:intergenic
CATGGAGTGGGAATCACCTT+TGG 0.452323 6_2:+78830306 Msa0930040:CDS
TTTGTGAAGGGATACTATAT+TGG 0.456511 6_2:+78827087 Msa0930040:CDS
GTTGTTGCAGGTGCAGAATC+TGG 0.460483 6_2:-78832203 None:intergenic
GTTGTTGCAGGTGCAGAATC+TGG 0.460483 6_2:-78832257 None:intergenic
GGAGGTGTTTGTGAGGGTTG+CGG 0.462528 6_2:+78827192 Msa0930040:CDS
GTTGTTGCAGGTGCAGAGTC+TGG 0.464505 6_2:-78832149 None:intergenic
CCATGAACAGCAGTTGTTGC+AGG 0.474237 6_2:-78832269 None:intergenic
TGATTATGAAAGTGATTCAT+TGG 0.474698 6_2:+78829852 Msa0930040:CDS
TTTCAGGTGGTTCGGAGCGG+AGG 0.476568 6_2:-78826693 None:intergenic
TGATCAGGGTCAGTAGTACT+TGG 0.477689 6_2:-78829784 None:intergenic
CAGAAATTTACCTTGTTTGG+TGG 0.479134 6_2:-78832320 None:intergenic
GAGGTTTAGGAATGGAGGAT+GGG 0.479603 6_2:+78829722 Msa0930040:CDS
TGAAGATGCTGTAGTAATGA+AGG 0.480288 6_2:+78829447 Msa0930040:CDS
TGCTCTCCAGGCCCTTCCAA+AGG 0.480401 6_2:-78830322 None:intergenic
AGAATCATCAGGGTCAGAAC+TGG 0.480581 6_2:-78829875 None:intergenic
GTAGTGATTGTAATGAAAAT+GGG 0.482875 6_2:+78827304 Msa0930040:CDS
ATGCTCCTGCTACTGGTAGA+AGG 0.483038 6_2:+78832072 Msa0930040:CDS
CGTGACGTTTCGATGGATAG+TGG 0.483806 6_2:+78827006 Msa0930040:CDS
AGAGATGAGAAGTTTGATGA+TGG 0.489449 6_2:+78829814 Msa0930040:CDS
AGAAGAGAGAGGTTTAGGAA+TGG 0.490277 6_2:+78829714 Msa0930040:CDS
GAATCACCTTTGGAAGGGCC+TGG 0.493398 6_2:+78830316 Msa0930040:CDS
GAGATGAGAAGTTTGATGAT+GGG 0.493502 6_2:+78829815 Msa0930040:CDS
AGGGCAAAGGAGATTATTGA+AGG 0.494853 6_2:+78830351 Msa0930040:CDS
TGGAGGAGTGGGTGGATCGA+GGG 0.499701 6_2:-78826644 None:intergenic
AGATCTAATATATGTGTCCT+TGG 0.500092 6_2:-78830187 None:intergenic
GCGAAAGTTGTGGAATTTGA+CGG 0.504626 6_2:+78828975 Msa0930040:CDS
ATTCTGATGTTAGAGGAGAC+AGG 0.505760 6_2:+78829677 Msa0930040:CDS
CCGGTTCGGCTCTTTCGGAT+CGG 0.506227 6_2:+78826845 Msa0930040:CDS
TTGAACCATGAAGACGAGTT+CGG 0.509241 6_2:+78826553 Msa0930040:CDS
GGGCTTCCTTGAACTCAGCT+AGG 0.510275 6_2:-78829987 None:intergenic
GTTGGTGGAGGTGTTTGTGA+GGG 0.511209 6_2:+78827186 Msa0930040:CDS
CTGCGAGCGTGACGTTTCGA+TGG 0.512099 6_2:+78826999 Msa0930040:CDS
GTATTACATTCCACTCAGTA+AGG 0.513597 6_2:-78830008 None:intergenic
GTGAAACGAGAAGATGGTGG+AGG 0.513837 6_2:-78826661 None:intergenic
GTGGGTTTAAAGAGGAACTG+AGG 0.517564 6_2:+78827025 Msa0930040:CDS
GAATAGCAGTTGTAAGGGGA+AGG 0.518416 6_2:+78829585 Msa0930040:CDS
TTGAGAGTGAAACGAGAAGA+TGG 0.519723 6_2:-78826667 None:intergenic
TGGGTGACCAACACACGTAC+AGG 0.520595 6_2:+78830133 Msa0930040:CDS
GTTAAGAATAGCAGTTGTAA+GGG 0.523086 6_2:+78829580 Msa0930040:CDS
ACTTTCTTCTCTCCGTTCGG+TGG 0.523310 6_2:-78826883 None:intergenic
GATGGATAGTGGGTTTAAAG+AGG 0.524140 6_2:+78827017 Msa0930040:CDS
TTGATTTAGATGTTGATAAG+TGG 0.527116 6_2:+78829305 Msa0930040:CDS
AGGTGTTCGGAGGACATTTG+AGG 0.530160 6_2:+78826930 Msa0930040:CDS
TGAGACCTTCTACCAGTAGC+AGG 0.531642 6_2:-78832077 None:intergenic
CCAGTAGCAGGAGCATGTGC+AGG 0.532121 6_2:-78832065 None:intergenic
TGAAGAGATGTTGAAGGTTG+TGG 0.532420 6_2:+78827116 Msa0930040:CDS
TTGGAAGAAGGGGTGAGAAG+CGG 0.533583 6_2:-78826762 None:intergenic
CTCTTTCGGATCGGTTTGAG+AGG 0.536689 6_2:+78826854 Msa0930040:CDS
GATGACAGTGAAGAAGAGAG+AGG 0.538137 6_2:+78829703 Msa0930040:CDS
ATGGGAAAAGGTATAGGATG+TGG 0.538368 6_2:+78829380 Msa0930040:CDS
GGTATGCAGCTGAGTTAAAG+AGG 0.542441 6_2:+78830406 Msa0930040:CDS
CAAAGGTGATTCCCACTCCA+TGG 0.543582 6_2:-78830305 None:intergenic
GTGAAGGGATACTATATTGG+CGG 0.545463 6_2:+78827090 Msa0930040:CDS
AGACCACAATGTCATGGCAT+GGG 0.547643 6_2:+78832474 Msa0930040:CDS
GATATTGTCTGCGAAAGTTG+TGG 0.548452 6_2:+78828965 Msa0930040:CDS
GTTTAGGTTTAGGTTTGGGT+CGG 0.549168 6_2:-78826806 None:intergenic
TTGGAAGCTTAATCGACGGA+TGG 0.549319 6_2:+78829012 Msa0930040:CDS
GTGGATCGAGGGTGTTGAGA+AGG 0.552372 6_2:-78826633 None:intergenic
AAGATATGAAAAGTTTAGGA+TGG 0.554199 6_2:+78829915 Msa0930040:CDS
TGTTGGTGGAGGTGTTTGTG+AGG 0.554629 6_2:+78827185 Msa0930040:CDS
CAACAACGTTGAGAGGTGTT+CGG 0.556960 6_2:+78826917 Msa0930040:CDS
TTGCCAAGAAAAGCTGTTGG+TGG 0.557146 6_2:+78827171 Msa0930040:CDS
AAGTTGTGGAATTTGACGGT+TGG 0.557511 6_2:+78828979 Msa0930040:CDS
GGCTTCCTTGAACTCAGCTA+GGG 0.560517 6_2:-78829986 None:intergenic
AGCGGAAGCTTTCGGTGTCG+AGG 0.562057 6_2:-78826744 None:intergenic
AAGGTATAGGATGTGGTGGA+AGG 0.562652 6_2:+78829387 Msa0930040:CDS
AAGACCACAATGTCATGGCA+TGG 0.562805 6_2:+78832473 Msa0930040:CDS
GGCACCTCAGCACTCGGTGT+CGG 0.562950 6_2:+78826574 Msa0930040:CDS
GGTGTTGAGAAGGCCGTAAG+TGG 0.564170 6_2:-78826623 None:intergenic
ACCATTTAAACCACCAAACA+AGG 0.564292 6_2:+78832310 Msa0930040:CDS
ATTCAAGTACAAGGTTGGCA+TGG 0.564426 6_2:+78829954 Msa0930040:CDS
CGGTGCTGAAGAGATGTTGA+AGG 0.565844 6_2:+78827110 Msa0930040:CDS
ACATCATGAAAGACATGAGA+AGG 0.566593 6_2:+78830280 Msa0930040:CDS
CCGCCGAGAGTGTTTGTGAA+GGG 0.568180 6_2:+78827075 Msa0930040:CDS
ATCGCGTTTGGTCAGATCGA+CGG 0.568293 6_2:+78828938 Msa0930040:intron
TTGAGTCTGACGTCCTTGAA+AGG 0.568707 6_2:+78829042 Msa0930040:CDS
ATCTATACAACAACGTTGAG+AGG 0.568839 6_2:+78826910 Msa0930040:CDS
CCAAGAAAAGCTGTTGGTGG+AGG 0.569004 6_2:+78827174 Msa0930040:CDS
ACTGAGTGGAATGTAATACA+TGG 0.569149 6_2:+78830012 Msa0930040:CDS
ATGTAACGGAAGCTGTAAGA+TGG 0.570898 6_2:+78827242 Msa0930040:CDS
CCCTCCATGATGAAAAGCTA+CGG 0.571792 6_2:-78829230 None:intergenic
ACATGGGAGGGAGTTTAAGA+TGG 0.574246 6_2:+78830029 Msa0930040:CDS
ACAGGATTAAAACATGGAGT+GGG 0.575004 6_2:+78830151 Msa0930040:CDS
TGTGCAGGCACATTAACAGC+AGG 0.575206 6_2:-78832050 None:intergenic
GTGACGTTTCGATGGATAGT+GGG 0.575896 6_2:+78827007 Msa0930040:CDS
TGGAAGCTTAATCGACGGAT+GGG 0.575949 6_2:+78829013 Msa0930040:CDS
TGTTGCTTTATGTAGTCAAG+TGG 0.576929 6_2:+78830113 Msa0930040:CDS
GGAAAAGGTATAGGATGTGG+TGG 0.581617 6_2:+78829383 Msa0930040:CDS
GAAGATGGTGGAGGAGTGGG+TGG 0.583270 6_2:-78826652 None:intergenic
GAGTGGGAATCACCTTTGGA+AGG 0.583305 6_2:+78830310 Msa0930040:CDS
TACCCCATGCCATGACATTG+TGG 0.587161 6_2:-78832477 None:intergenic
AGATGAGAAGTTTGATGATG+GGG 0.587215 6_2:+78829816 Msa0930040:CDS
GAGTTCGGCACCTCAGCACT+CGG 0.587519 6_2:+78826568 Msa0930040:CDS
GCCTTTGGAAGCTTAATCGA+CGG 0.587847 6_2:+78829008 Msa0930040:CDS
TCCGCCGAGAGTGTTTGTGA+AGG 0.587875 6_2:+78827074 Msa0930040:CDS
ACGAGAAGATGGTGGAGGAG+TGG 0.589446 6_2:-78826656 None:intergenic
TATTACATTCCACTCAGTAA+GGG 0.589981 6_2:-78830007 None:intergenic
GTTGAGAAGGCCGTAAGTGG+TGG 0.592261 6_2:-78826620 None:intergenic
TACAGGATTAAAACATGGAG+TGG 0.595612 6_2:+78830150 Msa0930040:CDS
TTTCCTCATCAGAATCATCA+GGG 0.596188 6_2:-78829885 None:intergenic
GTTGCTTTATGTAGTCAAGT+GGG 0.597565 6_2:+78830114 Msa0930040:CDS
AGAGTGAAACGAGAAGATGG+TGG 0.598146 6_2:-78826664 None:intergenic
GGGCCTGGAGAGCAAAGAAG+AGG 0.600440 6_2:+78830331 Msa0930040:CDS
GAGAGCAAAGAAGAGGGCAA+AGG 0.601678 6_2:+78830338 Msa0930040:CDS
CGATCCGAAAGAGCCGAACC+GGG 0.602068 6_2:-78826844 None:intergenic
CTTCCGTTACATCGAAAACA+AGG 0.602706 6_2:-78827231 None:intergenic
AAAGGAGATTATTGAAGGTG+AGG 0.606012 6_2:+78830356 Msa0930040:CDS
GATGATGAGGAAGTTGATGC+TGG 0.606323 6_2:+78829634 Msa0930040:CDS
TCAGGTGGTTCGGAGCGGAG+GGG 0.606340 6_2:-78826691 None:intergenic
TATCCCTTCACAAACACTCT+CGG 0.606463 6_2:-78827078 None:intergenic
CAAGAGTTAATGATTTCAGG+TGG 0.609204 6_2:-78826706 None:intergenic
ATGAGAAGGAACCATGGAGT+GGG 0.612351 6_2:+78830294 Msa0930040:CDS
CATGATGTTGTTGAAAGTGA+TGG 0.612797 6_2:+78829514 Msa0930040:CDS
GGCACATTAACAGCAGGCTG+AGG 0.615594 6_2:-78832044 None:intergenic
AACTCTTGGGAACTCATGGA+AGG 0.617874 6_2:+78826721 Msa0930040:CDS
TGGGTTTAAAGAGGAACTGA+GGG 0.619505 6_2:+78827026 Msa0930040:CDS
GAGCAAAGACCACAATGTCA+TGG 0.619845 6_2:+78832468 Msa0930040:CDS
ATGGTGAGTAAACAGAAACA+GGG 0.621676 6_2:+78827261 Msa0930040:CDS
GGAGCTTCTGAAAGAGAAGA+CGG 0.622205 6_2:+78827047 Msa0930040:CDS
AACAGTATACCCTGATATGG+AGG 0.625415 6_2:+78830385 Msa0930040:CDS
GGCCTGGAGAGCAAAGAAGA+GGG 0.625625 6_2:+78830332 Msa0930040:CDS
TAGATCTGCTACTTCCAAGT+GGG 0.626500 6_2:+78830203 Msa0930040:CDS
GATGTTGTTGAAAGTGATGG+TGG 0.627330 6_2:+78829517 Msa0930040:CDS
AGCTGCATACCTCCATATCA+GGG 0.627607 6_2:-78830394 None:intergenic
GGTTTGCCAAGAAAAGCTGT+TGG 0.627797 6_2:+78827168 Msa0930040:CDS
TGACCCTGATGATTCTGATG+AGG 0.631034 6_2:+78829882 Msa0930040:CDS
CATGAGAAGGAACCATGGAG+TGG 0.633932 6_2:+78830293 Msa0930040:CDS
GTGGAATGTAATACATGGGA+GGG 0.637428 6_2:+78830017 Msa0930040:CDS
AAAGACATGAGAAGGAACCA+TGG 0.639571 6_2:+78830288 Msa0930040:CDS
AGTGGGAATCACCTTTGGAA+GGG 0.641839 6_2:+78830311 Msa0930040:CDS
AAGTGAAGGTTCTGATGATG+AGG 0.642734 6_2:+78829621 Msa0930040:CDS
TGGGGACCACACATGTGCCA+AGG 0.644735 6_2:+78830170 Msa0930040:CDS
ATGTGTCCTTGGCACATGTG+TGG 0.645669 6_2:-78830176 None:intergenic
GTATGCAGCTGAGTTAAAGA+GGG 0.645685 6_2:+78830407 Msa0930040:CDS
TGATTTCAGGTGGTTCGGAG+CGG 0.646701 6_2:-78826696 None:intergenic
GACCACAATGTCATGGCATG+GGG 0.647011 6_2:+78832475 Msa0930040:CDS
CTGAGTGGAATGTAATACAT+GGG 0.647042 6_2:+78830013 Msa0930040:CDS
GACTGGTTGATATGTTACAA+AGG 0.652204 6_2:+78829265 Msa0930040:CDS
ACCGAACGGAGAGAAGAAAG+TGG 0.652619 6_2:+78826885 Msa0930040:CDS
AAGTTAAAGAGACGATGTGG+TGG 0.652944 6_2:-78826597 None:intergenic
TCAAGGAAGCCCTTACTGAG+TGG 0.653182 6_2:+78829998 Msa0930040:CDS
GATGAGGAAGTTGATGCTGG+TGG 0.655184 6_2:+78829637 Msa0930040:CDS
GAGAGGATATGTCCACCGAA+CGG 0.656504 6_2:+78826871 Msa0930040:CDS
TTAAGAATAGCAGTTGTAAG+GGG 0.658118 6_2:+78829581 Msa0930040:CDS
GTGGCCGACACCGAGTGCTG+AGG 0.659050 6_2:-78826578 None:intergenic
TCCGTCGATTAAGCTTCCAA+AGG 0.659512 6_2:-78829009 None:intergenic
TTAGATCTGCTACTTCCAAG+TGG 0.669290 6_2:+78830202 Msa0930040:CDS
ACACGTACAGGATTAAAACA+TGG 0.670076 6_2:+78830145 Msa0930040:CDS
GACATTTGAGGCTTGCAATG+CGG 0.676497 6_2:+78826942 Msa0930040:CDS
AGTGGAATGTAATACATGGG+AGG 0.691528 6_2:+78830016 Msa0930040:CDS
CCCTTCACAAACACTCTCGG+CGG 0.696914 6_2:-78827075 None:intergenic
CAACGTTGAGAGGTGTTCGG+AGG 0.699173 6_2:+78826920 Msa0930040:CDS
CAGGATTAAAACATGGAGTG+GGG 0.701719 6_2:+78830152 Msa0930040:CDS
TGGAAGTTAAAGAGACGATG+TGG 0.732203 6_2:-78826600 None:intergenic
TGGTGAGTAAACAGAAACAG+GGG 0.736014 6_2:+78827262 Msa0930040:CDS
GCTTCTGAAAGAGAAGACGG+TGG 0.771527 6_2:+78827050 Msa0930040:CDS
TGGTTGATATGTTACAAAGG+TGG 0.775980 6_2:+78829268 Msa0930040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAAAAACAACATTTTA+CGG + chr6_2:78828008-78828027 Msa0930040:intron 10.0%
!!! ATAATAAAACGTTTTATAAA+AGG + chr6_2:78828804-78828823 Msa0930040:intron 10.0%
!!! TATTGTTTTTTGATTTATTT+TGG + chr6_2:78830777-78830796 Msa0930040:intron 10.0%
!! CAAATTAAAAATCAATAATA+TGG - chr6_2:78830814-78830833 None:intergenic 10.0%
!!! AAAAAAAAACAACATTTTAC+GGG + chr6_2:78828009-78828028 Msa0930040:intron 15.0%
!! AAAACAAAAAAAATTTGTCA+GGG - chr6_2:78828595-78828614 None:intergenic 15.0%
!! TAAAACAAAAAAAATTTGTC+AGG - chr6_2:78828596-78828615 None:intergenic 15.0%
!! TTACAGAAACAATATAATTA+TGG + chr6_2:78829361-78829380 Msa0930040:CDS 15.0%
!! TACAGAAACAATATAATTAT+GGG + chr6_2:78829362-78829381 Msa0930040:CDS 15.0%
!!! TTTTTGATTTATTTTGGTTA+TGG + chr6_2:78830783-78830802 Msa0930040:intron 15.0%
!!! TTTTGATTTATTTTGGTTAT+GGG + chr6_2:78830784-78830803 Msa0930040:intron 15.0%
!!! AGAAAGGTATAATTTTAATA+TGG + chr6_2:78831808-78831827 Msa0930040:intron 15.0%
!! CTAATCAATGAAAAAAAAAA+AGG - chr6_2:78832402-78832421 None:intergenic 15.0%
!! AAAAAAGACTGAATTAATAA+TGG - chr6_2:78832748-78832767 None:intergenic 15.0%
!!! TCATCATTTTATTCACTTTT+TGG + chr6_2:78827943-78827962 Msa0930040:intron 20.0%
!!! GTTGTTTTTTTTTAAGTTGT+AGG - chr6_2:78828002-78828021 None:intergenic 20.0%
!!! AAAAAAAACAACATTTTACG+GGG + chr6_2:78828010-78828029 Msa0930040:intron 20.0%
!! TAGTTTCAGAATATAAAAGT+CGG + chr6_2:78828459-78828478 Msa0930040:intron 20.0%
!! AGCCTTAAGTTTATAAAAAA+GGG - chr6_2:78828497-78828516 None:intergenic 20.0%
!! AAGCCTTAAGTTTATAAAAA+AGG - chr6_2:78828498-78828517 None:intergenic 20.0%
!! ATAAATATTCTTACCTTTCA+AGG - chr6_2:78829058-78829077 None:intergenic 20.0%
!! AACAATATAATTATGGGAAA+AGG + chr6_2:78829368-78829387 Msa0930040:CDS 20.0%
!! TAACAAAAAATTCAAGTACA+AGG + chr6_2:78829945-78829964 Msa0930040:CDS 20.0%
!! GCAAATTTCAAGAAAAAATA+TGG + chr6_2:78830935-78830954 Msa0930040:intron 20.0%
!! AATTTCAAGAAAAAATATGG+TGG + chr6_2:78830938-78830957 Msa0930040:intron 20.0%
!! TGAATAGAATATCAACTATT+AGG + chr6_2:78831236-78831255 Msa0930040:intron 20.0%
!! AATTAATAATGGTTGATCTA+AGG - chr6_2:78832737-78832756 None:intergenic 20.0%
! TGTAGTGATTGTAATGAAAA+TGG + chr6_2:78827303-78827322 Msa0930040:CDS 25.0%
! GTAGTGATTGTAATGAAAAT+GGG + chr6_2:78827304-78827323 Msa0930040:CDS 25.0%
! CTAAATTATGTGTTCATTCA+TGG - chr6_2:78827529-78827548 None:intergenic 25.0%
!! GCTTATTCATATAATGCTTT+TGG + chr6_2:78827974-78827993 Msa0930040:intron 25.0%
! CCTTAAGTTTATAAAAAAGG+GGG - chr6_2:78828495-78828514 None:intergenic 25.0%
! GCCTTAAGTTTATAAAAAAG+GGG - chr6_2:78828496-78828515 None:intergenic 25.0%
!!! TTTTGTTTTAAAAAAGTCCC+TGG + chr6_2:78828606-78828625 Msa0930040:intron 25.0%
!! AACGTTTTATAAAAGGAGAA+AGG + chr6_2:78828811-78828830 Msa0930040:intron 25.0%
!! ACGTTTTATAAAAGGAGAAA+GGG + chr6_2:78828812-78828831 Msa0930040:intron 25.0%
!! TTTACCATTTTCTCATTTTG+TGG + chr6_2:78829132-78829151 Msa0930040:intron 25.0%
!! TTACCATTTTCTCATTTTGT+GGG + chr6_2:78829133-78829152 Msa0930040:intron 25.0%
!! TTGATTTAGATGTTGATAAG+TGG + chr6_2:78829305-78829324 Msa0930040:CDS 25.0%
!! ATAATTATGGGAAAAGGTAT+AGG + chr6_2:78829374-78829393 Msa0930040:CDS 25.0%
!!! AAGTTGATTTCAAGTTAGTT+AGG + chr6_2:78829419-78829438 Msa0930040:CDS 25.0%
! TCTAATTATCTCATGATTGA+AGG + chr6_2:78829760-78829779 Msa0930040:CDS 25.0%
! TGATTATGAAAGTGATTCAT+TGG + chr6_2:78829852-78829871 Msa0930040:CDS 25.0%
!! ATCCTAAACTTTTCATATCT+TGG - chr6_2:78829916-78829935 None:intergenic 25.0%
! AAGATATGAAAAGTTTAGGA+TGG + chr6_2:78829915-78829934 Msa0930040:CDS 25.0%
! AAAAAATTCAAGTACAAGGT+TGG + chr6_2:78829949-78829968 Msa0930040:CDS 25.0%
! AAAATGACAATGAAAGGATT+AGG + chr6_2:78830055-78830074 Msa0930040:CDS 25.0%
! AAATGACAATGAAAGGATTA+GGG + chr6_2:78830056-78830075 Msa0930040:CDS 25.0%
! AAGTAAAAAGATCCAAATCT+GGG - chr6_2:78830489-78830508 None:intergenic 25.0%
!!! TCTTTTTACTTCTGTTTTGA+AGG + chr6_2:78830498-78830517 Msa0930040:intron 25.0%
!!! AATATTACCCTTTAGCTTTT+GGG + chr6_2:78830637-78830656 Msa0930040:intron 25.0%
!! ACATTTAGGGTAAAAACTAA+AGG - chr6_2:78831113-78831132 None:intergenic 25.0%
! TCATCAATACATCACATTTA+GGG - chr6_2:78831126-78831145 None:intergenic 25.0%
! TTCATCAATACATCACATTT+AGG - chr6_2:78831127-78831146 None:intergenic 25.0%
!!! TTAAGTCTTTTTAAAGGCAT+AGG - chr6_2:78831295-78831314 None:intergenic 25.0%
!! TGCCTTTAAAAAGACTTAAT+AGG + chr6_2:78831296-78831315 Msa0930040:intron 25.0%
!! GCCTTTAAAAAGACTTAATA+GGG + chr6_2:78831297-78831316 Msa0930040:intron 25.0%
!! TCCCTATTAAGTCTTTTTAA+AGG - chr6_2:78831301-78831320 None:intergenic 25.0%
! TATAATGTTAGTGCAATCAA+TGG + chr6_2:78831565-78831584 Msa0930040:intron 25.0%
! ATAATGTTAGTGCAATCAAT+GGG + chr6_2:78831566-78831585 Msa0930040:intron 25.0%
!! AGGCATCAATTTACATATTT+TGG + chr6_2:78832347-78832366 Msa0930040:intron 25.0%
! ACATTACAAACCAGATAAAA+AGG - chr6_2:78832793-78832812 None:intergenic 25.0%
!!! TTTTTATCTGGTTTGTAATG+TGG + chr6_2:78832792-78832811 Msa0930040:intron 25.0%
!!! TTTTATCTGGTTTGTAATGT+GGG + chr6_2:78832793-78832812 Msa0930040:intron 25.0%
! TAACCCATTAATAGCAAAAA+GGG - chr6_2:78832829-78832848 None:intergenic 25.0%
! ATAACCCATTAATAGCAAAA+AGG - chr6_2:78832830-78832849 None:intergenic 25.0%
ACCTGAAATCATTAACTCTT+GGG + chr6_2:78826708-78826727 Msa0930040:CDS 30.0%
! TTTTCTTTGTTGGATGGTTT+TGG - chr6_2:78826784-78826803 None:intergenic 30.0%
!!! GTTTTTTCAAAGCAAGGTTT+AGG - chr6_2:78826825-78826844 None:intergenic 30.0%
TTTGTGAAGGGATACTATAT+TGG + chr6_2:78827087-78827106 Msa0930040:CDS 30.0%
TAGCTAACTAACTACAAAGT+GGG - chr6_2:78827341-78827360 None:intergenic 30.0%
! GATTAGTTGCAAGTTACAAA+AGG - chr6_2:78827493-78827512 None:intergenic 30.0%
TTTGTGTGTCAGGATTATTA+TGG + chr6_2:78827590-78827609 Msa0930040:intron 30.0%
GATTATTATGGTTTCCTTTG+TGG + chr6_2:78827602-78827621 Msa0930040:intron 30.0%
! AATTGGATTTTTCTCCACAA+AGG - chr6_2:78827619-78827638 None:intergenic 30.0%
! CTGTGATGATGAACATAAAT+TGG - chr6_2:78827636-78827655 None:intergenic 30.0%
TCTTCATTGTTGAACTTGAA+TGG + chr6_2:78827658-78827677 Msa0930040:intron 30.0%
CTTCATTGTTGAACTTGAAT+GGG + chr6_2:78827659-78827678 Msa0930040:intron 30.0%
TTCATTGTTGAACTTGAATG+GGG + chr6_2:78827660-78827679 Msa0930040:intron 30.0%
ATATATATAAACCACACTCC+TGG - chr6_2:78827733-78827752 None:intergenic 30.0%
! GAATGTTGATAAATGAAGAC+TGG + chr6_2:78827804-78827823 Msa0930040:intron 30.0%
CATCTAATTAAAACACAAGC+AGG + chr6_2:78828042-78828061 Msa0930040:intron 30.0%
! GAAGTACTTATCCAAAAACT+TGG - chr6_2:78828138-78828157 None:intergenic 30.0%
! TCATACATCATGACATCTTT+TGG - chr6_2:78828433-78828452 None:intergenic 30.0%
!!! CCCCCTTTTTTATAAACTTA+AGG + chr6_2:78828492-78828511 Msa0930040:intron 30.0%
! TTTTATAAAAGGAGAAAGGG+AGG + chr6_2:78828815-78828834 Msa0930040:intron 30.0%
TTTATAAAAGGAGAAAGGGA+GGG + chr6_2:78828816-78828835 Msa0930040:intron 30.0%
! AGAATATTTATGCGCCTTTT+TGG + chr6_2:78829067-78829086 Msa0930040:intron 30.0%
ACCACAGTATAAAACCAAAA+AGG - chr6_2:78829084-78829103 None:intergenic 30.0%
! TACCATTTTCTCATTTTGTG+GGG + chr6_2:78829134-78829153 Msa0930040:intron 30.0%
! AACATTCATCACTATCGATT+TGG - chr6_2:78829161-78829180 None:intergenic 30.0%
!!! TGGTGTTATTTTGAACTAGA+AGG + chr6_2:78829325-78829344 Msa0930040:CDS 30.0%
!!! GGTGTTATTTTGAACTAGAA+GGG + chr6_2:78829326-78829345 Msa0930040:CDS 30.0%
TCAGATTCTTCTATACAGTT+AGG - chr6_2:78829556-78829575 None:intergenic 30.0%
TTACAACTGCTATTCTTAAC+AGG - chr6_2:78829580-78829599 None:intergenic 30.0%
TGTTAAGAATAGCAGTTGTA+AGG + chr6_2:78829579-78829598 Msa0930040:CDS 30.0%
GTTAAGAATAGCAGTTGTAA+GGG + chr6_2:78829580-78829599 Msa0930040:CDS 30.0%
TTAAGAATAGCAGTTGTAAG+GGG + chr6_2:78829581-78829600 Msa0930040:CDS 30.0%
! CATCTCTATTTCTTTGATCA+GGG - chr6_2:78829801-78829820 None:intergenic 30.0%
! TCATCTCTATTTCTTTGATC+AGG - chr6_2:78829802-78829821 None:intergenic 30.0%
GTCCAAGATATGAAAAGTTT+AGG + chr6_2:78829911-78829930 Msa0930040:CDS 30.0%
TATTACATTCCACTCAGTAA+GGG - chr6_2:78830010-78830029 None:intergenic 30.0%
TGGTGAAAAATGACAATGAA+AGG + chr6_2:78830049-78830068 Msa0930040:CDS 30.0%
AGATCTAATATATGTGTCCT+TGG - chr6_2:78830190-78830209 None:intergenic 30.0%
TTCTCAGTACACATTATCTT+TGG - chr6_2:78830246-78830265 None:intergenic 30.0%
GAAGTAAAAAGATCCAAATC+TGG - chr6_2:78830490-78830509 None:intergenic 30.0%
CAAAAGCTAAAGGGTAATAT+TGG - chr6_2:78830638-78830657 None:intergenic 30.0%
!!! CAATATTACCCTTTAGCTTT+TGG + chr6_2:78830636-78830655 Msa0930040:intron 30.0%
!!! ATATTACCCTTTAGCTTTTG+GGG + chr6_2:78830638-78830657 Msa0930040:intron 30.0%
! ACACTGTTACTTGAAGATAT+TGG + chr6_2:78830702-78830721 Msa0930040:intron 30.0%
ATATTGGAACTGATAAGAGA+TGG + chr6_2:78830718-78830737 Msa0930040:intron 30.0%
TATTGGAACTGATAAGAGAT+GGG + chr6_2:78830719-78830738 Msa0930040:intron 30.0%
TGTATGTGTTTGTTTGATGA+AGG + chr6_2:78830844-78830863 Msa0930040:intron 30.0%
GTATGTGTTTGTTTGATGAA+GGG + chr6_2:78830845-78830864 Msa0930040:intron 30.0%
TTCAAGAAAAAATATGGTGG+AGG + chr6_2:78830941-78830960 Msa0930040:intron 30.0%
TGAAAGTTGACAGAAAACTT+TGG + chr6_2:78831077-78831096 Msa0930040:intron 30.0%
ACATAATAGCTATGTCTGAA+TGG + chr6_2:78831197-78831216 Msa0930040:intron 30.0%
! TCAACTATTAGGTCTAAGAT+TGG + chr6_2:78831247-78831266 Msa0930040:intron 30.0%
! TTAGGTCTAAGATTGGAAAT+TGG + chr6_2:78831254-78831273 Msa0930040:intron 30.0%
! TTTGAAGTTGCTAAGATGTA+TGG + chr6_2:78831370-78831389 Msa0930040:intron 30.0%
TTCCAATACATAGTTGATCT+TGG + chr6_2:78831397-78831416 Msa0930040:intron 30.0%
TTCCAAGATCAACTATGTAT+TGG - chr6_2:78831402-78831421 None:intergenic 30.0%
ACCAAAAAAACTGAGAAGAA+GGG + chr6_2:78831657-78831676 Msa0930040:intron 30.0%
! ATTAATGGTAGTACTTTTGC+AGG - chr6_2:78831773-78831792 None:intergenic 30.0%
!! TTTTTGAGCTTCTGGATTAA+TGG - chr6_2:78831788-78831807 None:intergenic 30.0%
TGCAACAATACAATATATGC+AGG - chr6_2:78831891-78831910 None:intergenic 30.0%
CATATATTGTATTGTTGCAG+AGG + chr6_2:78831892-78831911 Msa0930040:intron 30.0%
AGACAGAAATTTACCTTGTT+TGG - chr6_2:78832326-78832345 None:intergenic 30.0%
TTAGAAAAAACATGCTGAGA+TGG + chr6_2:78832418-78832437 Msa0930040:intron 30.0%
TTGTCTATGTCTATGTCAAT+AGG - chr6_2:78832638-78832657 None:intergenic 30.0%
ATTGACATAGACATAGACAA+TGG + chr6_2:78832638-78832657 Msa0930040:intron 30.0%
!!! CAGTCTTTTTTTGCTATTAC+TGG + chr6_2:78832757-78832776 Msa0930040:intron 30.0%
!!! AATGCCCTTTTTGCTATTAA+TGG + chr6_2:78832822-78832841 Msa0930040:intron 30.0%
!!! ATGCCCTTTTTGCTATTAAT+GGG + chr6_2:78832823-78832842 Msa0930040:intron 30.0%
! TCTTTAACTTCCACCACTTA+CGG + chr6_2:78826610-78826629 Msa0930040:CDS 35.0%
! GTTAATGATTTCAGGTGGTT+CGG - chr6_2:78826704-78826723 None:intergenic 35.0%
CAAGAGTTAATGATTTCAGG+TGG - chr6_2:78826709-78826728 None:intergenic 35.0%
CACCTGAAATCATTAACTCT+TGG + chr6_2:78826707-78826726 Msa0930040:CDS 35.0%
TCCCAAGAGTTAATGATTTC+AGG - chr6_2:78826712-78826731 None:intergenic 35.0%
! CAAGGTTTAGGTTTAGGTTT+GGG - chr6_2:78826813-78826832 None:intergenic 35.0%
! TCAAAGCAAGGTTTAGGTTT+AGG - chr6_2:78826819-78826838 None:intergenic 35.0%
!! AACCTTGCTTTGAAAAAACC+CGG + chr6_2:78826826-78826845 Msa0930040:CDS 35.0%
ATCTATACAACAACGTTGAG+AGG + chr6_2:78826910-78826929 Msa0930040:CDS 35.0%
!!! TTGCCTTGTTTTCGATGTAA+CGG + chr6_2:78827228-78827247 Msa0930040:CDS 35.0%
ATGGTGAGTAAACAGAAACA+GGG + chr6_2:78827261-78827280 Msa0930040:CDS 35.0%
CTAGCTAACTAACTACAAAG+TGG - chr6_2:78827342-78827361 None:intergenic 35.0%
TTGCAAGTTACAAAAGGACA+AGG - chr6_2:78827487-78827506 None:intergenic 35.0%
TGACGTTTACTATTGCCTAA+TGG + chr6_2:78827553-78827572 Msa0930040:intron 35.0%
GACGTTTACTATTGCCTAAT+GGG + chr6_2:78827554-78827573 Msa0930040:intron 35.0%
ATTGCCTAATGGGACAAATT+TGG + chr6_2:78827564-78827583 Msa0930040:intron 35.0%
ATCTCCAAATTTGTCCCATT+AGG - chr6_2:78827571-78827590 None:intergenic 35.0%
AATTTGGAGATTTGTGTGTC+AGG + chr6_2:78827580-78827599 Msa0930040:intron 35.0%
TCATTGTTGAACTTGAATGG+GGG + chr6_2:78827661-78827680 Msa0930040:intron 35.0%
TCAAATAGCACTTTACCATG+TGG - chr6_2:78827786-78827805 None:intergenic 35.0%
! TGTTGATAAATGAAGACTGG+TGG + chr6_2:78827807-78827826 Msa0930040:intron 35.0%
TCTTGAAGGAAACTTCTGTT+TGG + chr6_2:78827833-78827852 Msa0930040:intron 35.0%
CATTCTTAGAGTTCAACTCT+TGG - chr6_2:78828184-78828203 None:intergenic 35.0%
!!! GCCTTTTTGGTTTTATACTG+TGG + chr6_2:78829080-78829099 Msa0930040:intron 35.0%
! ATTACCGTAGCTTTTCATCA+TGG + chr6_2:78829226-78829245 Msa0930040:CDS 35.0%
ATCATGGAGGGTTATTTGTT+AGG + chr6_2:78829242-78829261 Msa0930040:CDS 35.0%
! TCATGGAGGGTTATTTGTTA+GGG + chr6_2:78829243-78829262 Msa0930040:CDS 35.0%
! GACTGGTTGATATGTTACAA+AGG + chr6_2:78829265-78829284 Msa0930040:CDS 35.0%
! TGGTTGATATGTTACAAAGG+TGG + chr6_2:78829268-78829287 Msa0930040:CDS 35.0%
TGAAGATGCTGTAGTAATGA+AGG + chr6_2:78829447-78829466 Msa0930040:CDS 35.0%
CATGATGTTGTTGAAAGTGA+TGG + chr6_2:78829514-78829533 Msa0930040:CDS 35.0%
GAAAAAGTGGTTGAAAGTGA+AGG + chr6_2:78829607-78829626 Msa0930040:CDS 35.0%
GATGAAGATTCTGATGTTAG+AGG + chr6_2:78829670-78829689 Msa0930040:CDS 35.0%
AGAGATGAGAAGTTTGATGA+TGG + chr6_2:78829814-78829833 Msa0930040:CDS 35.0%
! GAGATGAGAAGTTTGATGAT+GGG + chr6_2:78829815-78829834 Msa0930040:CDS 35.0%
!! AGATGAGAAGTTTGATGATG+GGG + chr6_2:78829816-78829835 Msa0930040:CDS 35.0%
TTTCCTCATCAGAATCATCA+GGG - chr6_2:78829888-78829907 None:intergenic 35.0%
! TTTTCCTCATCAGAATCATC+AGG - chr6_2:78829889-78829908 None:intergenic 35.0%
GATGATTCTGATGAGGAAAA+AGG + chr6_2:78829889-78829908 Msa0930040:CDS 35.0%
GTATTACATTCCACTCAGTA+AGG - chr6_2:78830011-78830030 None:intergenic 35.0%
ACTGAGTGGAATGTAATACA+TGG + chr6_2:78830012-78830031 Msa0930040:CDS 35.0%
CTGAGTGGAATGTAATACAT+GGG + chr6_2:78830013-78830032 Msa0930040:CDS 35.0%
!! TGTTGCTTTATGTAGTCAAG+TGG + chr6_2:78830113-78830132 Msa0930040:CDS 35.0%
! GTTGCTTTATGTAGTCAAGT+GGG + chr6_2:78830114-78830133 Msa0930040:CDS 35.0%
! TTTTAATCCTGTACGTGTGT+TGG - chr6_2:78830143-78830162 None:intergenic 35.0%
ACACGTACAGGATTAAAACA+TGG + chr6_2:78830145-78830164 Msa0930040:CDS 35.0%
TACAGGATTAAAACATGGAG+TGG + chr6_2:78830150-78830169 Msa0930040:CDS 35.0%
ACAGGATTAAAACATGGAGT+GGG + chr6_2:78830151-78830170 Msa0930040:CDS 35.0%
! TTGTACTTTTGTAACCCACT+TGG - chr6_2:78830220-78830239 None:intergenic 35.0%
ACATCATGAAAGACATGAGA+AGG + chr6_2:78830280-78830299 Msa0930040:CDS 35.0%
AAAGGAGATTATTGAAGGTG+AGG + chr6_2:78830356-78830375 Msa0930040:CDS 35.0%
CAAAACAGTATACCCTGATA+TGG + chr6_2:78830382-78830401 Msa0930040:CDS 35.0%
! CTGGTCTTTCAGTGTTAATT+AGG - chr6_2:78830452-78830471 None:intergenic 35.0%
!! GGTATACTTTTGATAGCAGT+TGG + chr6_2:78830597-78830616 Msa0930040:intron 35.0%
!! TACTTTTGATAGCAGTTGGT+AGG + chr6_2:78830601-78830620 Msa0930040:intron 35.0%
!! ACTTTTGATAGCAGTTGGTA+GGG + chr6_2:78830602-78830621 Msa0930040:intron 35.0%
AAGTGGAGAATAAGGAATCT+TGG + chr6_2:78830667-78830686 Msa0930040:intron 35.0%
AGAATAAGGAATCTTGGAGA+TGG + chr6_2:78830673-78830692 Msa0930040:intron 35.0%
CTTCATCTCTGATCAACAAA+AGG + chr6_2:78830743-78830762 Msa0930040:intron 35.0%
AGCTAAAGCAACATACTATC+AGG + chr6_2:78830994-78831013 Msa0930040:intron 35.0%
ACAAAAGATGCTGCAACTTA+AGG + chr6_2:78831024-78831043 Msa0930040:intron 35.0%
CAACTTAAGGCAATTGATGA+AGG + chr6_2:78831037-78831056 Msa0930040:intron 35.0%
AATAGGGAGATTGAACTTAG+TGG + chr6_2:78831313-78831332 Msa0930040:intron 35.0%
AGATTGAACTTAGTGGTGAA+TGG + chr6_2:78831320-78831339 Msa0930040:intron 35.0%
ACAGTGTAGTTGCAATTTCT+GGG + chr6_2:78831426-78831445 Msa0930040:intron 35.0%
CATTCATCAACCAAATTCTC+AGG - chr6_2:78831511-78831530 None:intergenic 35.0%
ACTCAAAAGCCACATATGAA+AGG + chr6_2:78831533-78831552 Msa0930040:intron 35.0%
AGAGTAACACCTTTCATATG+TGG - chr6_2:78831545-78831564 None:intergenic 35.0%
GACCAAAAAAACTGAGAAGA+AGG + chr6_2:78831656-78831675 Msa0930040:intron 35.0%
CCAAAAAAACTGAGAAGAAG+GGG + chr6_2:78831658-78831677 Msa0930040:intron 35.0%
ACTTGCCTCTTATTCTGTTT+GGG - chr6_2:78831700-78831719 None:intergenic 35.0%
AAGTACAGATGTACCAAATG+TGG + chr6_2:78831724-78831743 Msa0930040:intron 35.0%
TCCAGAAGCTCAAAAAAGAA+AGG + chr6_2:78831792-78831811 Msa0930040:intron 35.0%
!!! ACCTTTCTTTTTTGAGCTTC+TGG - chr6_2:78831796-78831815 None:intergenic 35.0%
ACATCATTCACATTACCAGT+AGG - chr6_2:78831936-78831955 None:intergenic 35.0%
ACATCATTCACATTACCAGT+AGG - chr6_2:78831936-78831955 None:intergenic 35.0%
! GAGTCTGGTGTATTTTCATT+TGG - chr6_2:78832137-78832156 None:intergenic 35.0%
ACCATTTAAACCACCAAACA+AGG + chr6_2:78832310-78832329 Msa0930040:CDS 35.0%
! ACCTTGTTTGGTGGTTTAAA+TGG - chr6_2:78832314-78832333 None:intergenic 35.0%
! CAGAAATTTACCTTGTTTGG+TGG - chr6_2:78832323-78832342 None:intergenic 35.0%
ACAAGGTAAATTTCTGTCTC+AGG + chr6_2:78832327-78832346 Msa0930040:intron 35.0%
TCTACACAAATATCATCTGC+TGG + chr6_2:78832512-78832531 Msa0930040:intron 35.0%
CTACACAAATATCATCTGCT+GGG + chr6_2:78832513-78832532 Msa0930040:intron 35.0%
TACACAAATATCATCTGCTG+GGG + chr6_2:78832514-78832533 Msa0930040:intron 35.0%
! GGATTTTTCTCTATTGTTCC+TGG - chr6_2:78832617-78832636 None:intergenic 35.0%
AGAAGAAGAAGCAAGATTGT+TGG + chr6_2:78832708-78832727 Msa0930040:intron 35.0%
! CTGAGAAATGCCTTTTTATC+TGG + chr6_2:78832780-78832799 Msa0930040:intron 35.0%
GGTTATAAATCCCTTTACAG+TGG + chr6_2:78832844-78832863 Msa0930040:intron 35.0%
CAATTACAGACCACTGTAAA+GGG - chr6_2:78832857-78832876 None:intergenic 35.0%
TTGAACCATGAAGACGAGTT+CGG + chr6_2:78826553-78826572 Msa0930040:CDS 40.0%
AAGTTAAAGAGACGATGTGG+TGG - chr6_2:78826600-78826619 None:intergenic 40.0%
TGGAAGTTAAAGAGACGATG+TGG - chr6_2:78826603-78826622 None:intergenic 40.0%
TTGAGAGTGAAACGAGAAGA+TGG - chr6_2:78826670-78826689 None:intergenic 40.0%
CATTAACTCTTGGGAACTCA+TGG + chr6_2:78826717-78826736 Msa0930040:CDS 40.0%
!!! TTGGATGGTTTTGGAAGAAG+GGG - chr6_2:78826775-78826794 None:intergenic 40.0%
!!! GTTGGATGGTTTTGGAAGAA+GGG - chr6_2:78826776-78826795 None:intergenic 40.0%
!!! TGTTGGATGGTTTTGGAAGA+AGG - chr6_2:78826777-78826796 None:intergenic 40.0%
!! TCGGTGTTTTCTTTGTTGGA+TGG - chr6_2:78826790-78826809 None:intergenic 40.0%
! GTTTAGGTTTAGGTTTGGGT+CGG - chr6_2:78826809-78826828 None:intergenic 40.0%
! GCAAGGTTTAGGTTTAGGTT+TGG - chr6_2:78826814-78826833 None:intergenic 40.0%
!!! AACCGGGTTTTTTCAAAGCA+AGG - chr6_2:78826831-78826850 None:intergenic 40.0%
!! TGCTTTGAAAAAACCCGGTT+CGG + chr6_2:78826831-78826850 Msa0930040:CDS 40.0%
! AGAGCAGCTTTTGATGCATT+TGG + chr6_2:78826967-78826986 Msa0930040:CDS 40.0%
!! GATGGATAGTGGGTTTAAAG+AGG + chr6_2:78827017-78827036 Msa0930040:CDS 40.0%
TGGGTTTAAAGAGGAACTGA+GGG + chr6_2:78827026-78827045 Msa0930040:CDS 40.0%
TATCCCTTCACAAACACTCT+CGG - chr6_2:78827081-78827100 None:intergenic 40.0%
GTGAAGGGATACTATATTGG+CGG + chr6_2:78827090-78827109 Msa0930040:CDS 40.0%
TGAAGAGATGTTGAAGGTTG+TGG + chr6_2:78827116-78827135 Msa0930040:CDS 40.0%
ATGTTGAAGGTTGTGGAAGA+GGG + chr6_2:78827123-78827142 Msa0930040:CDS 40.0%
CTTCCGTTACATCGAAAACA+AGG - chr6_2:78827234-78827253 None:intergenic 40.0%
! ATGTAACGGAAGCTGTAAGA+TGG + chr6_2:78827242-78827261 Msa0930040:CDS 40.0%
GATGGTGAGTAAACAGAAAC+AGG + chr6_2:78827260-78827279 Msa0930040:CDS 40.0%
TGGTGAGTAAACAGAAACAG+GGG + chr6_2:78827262-78827281 Msa0930040:CDS 40.0%
AGTGAACGTACATAAAGAGC+TGG - chr6_2:78827413-78827432 None:intergenic 40.0%
CAAGTTACAAAAGGACAAGG+AGG - chr6_2:78827484-78827503 None:intergenic 40.0%
CAAGAGCTAAACACTAAGGA+GGG - chr6_2:78828112-78828131 None:intergenic 40.0%
GAACCAAGAGCTAAACACTA+AGG - chr6_2:78828116-78828135 None:intergenic 40.0%
! AGCTCTTGGTTCCAAGTTTT+TGG + chr6_2:78828124-78828143 Msa0930040:intron 40.0%
CAAAATGCGGCCATATTACA+GGG - chr6_2:78828536-78828555 None:intergenic 40.0%
TCAAAATGCGGCCATATTAC+AGG - chr6_2:78828537-78828556 None:intergenic 40.0%
CAGGGACGAAAATCAAAATG+CGG - chr6_2:78828549-78828568 None:intergenic 40.0%
AAGAAGGAGAAGGAGATCAA+TGG - chr6_2:78828876-78828895 None:intergenic 40.0%
!! TTCAACAGTATCGACGTTGT+TGG - chr6_2:78828903-78828922 None:intergenic 40.0%
GATATTGTCTGCGAAAGTTG+TGG + chr6_2:78828965-78828984 Msa0930040:CDS 40.0%
GCGAAAGTTGTGGAATTTGA+CGG + chr6_2:78828975-78828994 Msa0930040:CDS 40.0%
AAGTTGTGGAATTTGACGGT+TGG + chr6_2:78828979-78828998 Msa0930040:CDS 40.0%
AGTTGTGGAATTTGACGGTT+GGG + chr6_2:78828980-78828999 Msa0930040:CDS 40.0%
GTCCCCACAAAATGAGAAAA+TGG - chr6_2:78829139-78829158 None:intergenic 40.0%
! ATGGGAAAAGGTATAGGATG+TGG + chr6_2:78829380-78829399 Msa0930040:CDS 40.0%
GATGTTGTTGAAAGTGATGG+TGG + chr6_2:78829517-78829536 Msa0930040:CDS 40.0%
TTGTAAGGGGAAGGAAAAAG+TGG + chr6_2:78829594-78829613 Msa0930040:CDS 40.0%
! AAGTGAAGGTTCTGATGATG+AGG + chr6_2:78829621-78829640 Msa0930040:CDS 40.0%
ATTCTGATGTTAGAGGAGAC+AGG + chr6_2:78829677-78829696 Msa0930040:CDS 40.0%
AGTGAAGAAGAGAGAGGTTT+AGG + chr6_2:78829709-78829728 Msa0930040:CDS 40.0%
AGAAGAGAGAGGTTTAGGAA+TGG + chr6_2:78829714-78829733 Msa0930040:CDS 40.0%
!! GATGATGGGGTTGAAATAGA+TGG + chr6_2:78829829-78829848 Msa0930040:CDS 40.0%
ATTCAAGTACAAGGTTGGCA+TGG + chr6_2:78829954-78829973 Msa0930040:CDS 40.0%
AGTGGAATGTAATACATGGG+AGG + chr6_2:78830016-78830035 Msa0930040:CDS 40.0%
GTGGAATGTAATACATGGGA+GGG + chr6_2:78830017-78830036 Msa0930040:CDS 40.0%
CAGGATTAAAACATGGAGTG+GGG + chr6_2:78830152-78830171 Msa0930040:CDS 40.0%
! TTAGATCTGCTACTTCCAAG+TGG + chr6_2:78830202-78830221 Msa0930040:CDS 40.0%
! TAGATCTGCTACTTCCAAGT+GGG + chr6_2:78830203-78830222 Msa0930040:CDS 40.0%
AAAGACATGAGAAGGAACCA+TGG + chr6_2:78830288-78830307 Msa0930040:CDS 40.0%
AGGGCAAAGGAGATTATTGA+AGG + chr6_2:78830351-78830370 Msa0930040:CDS 40.0%
AACAGTATACCCTGATATGG+AGG + chr6_2:78830385-78830404 Msa0930040:CDS 40.0%
GTATGCAGCTGAGTTAAAGA+GGG + chr6_2:78830407-78830426 Msa0930040:CDS 40.0%
GAGTTAAAGAGGGTTTCACA+AGG + chr6_2:78830417-78830436 Msa0930040:intron 40.0%
AGACCATTCATAGGAGTAGA+TGG + chr6_2:78830549-78830568 Msa0930040:intron 40.0%
GACCATTCATAGGAGTAGAT+GGG + chr6_2:78830550-78830569 Msa0930040:intron 40.0%
! TGTCACTTGAAGACTAGGTA+TGG + chr6_2:78830573-78830592 Msa0930040:intron 40.0%
CAACTACCCCAAAAGCTAAA+GGG - chr6_2:78830647-78830666 None:intergenic 40.0%
TCAACTACCCCAAAAGCTAA+AGG - chr6_2:78830648-78830667 None:intergenic 40.0%
GGTAGTTGAAGTGGAGAATA+AGG + chr6_2:78830659-78830678 Msa0930040:intron 40.0%
TTGAACACAGATTGTGTCTC+AGG + chr6_2:78830903-78830922 Msa0930040:intron 40.0%
TGCAATCAGGAACTTGATGA+TGG + chr6_2:78830967-78830986 Msa0930040:intron 40.0%
! GCAATCAGGAACTTGATGAT+GGG + chr6_2:78830968-78830987 Msa0930040:intron 40.0%
!! CAATCAGGAACTTGATGATG+GGG + chr6_2:78830969-78830988 Msa0930040:intron 40.0%
!! AATCAGGAACTTGATGATGG+GGG + chr6_2:78830970-78830989 Msa0930040:intron 40.0%
AAGCAACATACTATCAGGCA+TGG + chr6_2:78830999-78831018 Msa0930040:intron 40.0%
AGCAACATACTATCAGGCAT+GGG + chr6_2:78831000-78831019 Msa0930040:intron 40.0%
GTGGTGAATGGATATCAACT+TGG + chr6_2:78831332-78831351 Msa0930040:intron 40.0%
GAAGTTGCTAAGATGTATGG+TGG + chr6_2:78831373-78831392 Msa0930040:intron 40.0%
GACAGTGTAGTTGCAATTTC+TGG + chr6_2:78831425-78831444 Msa0930040:intron 40.0%
! TGCAATTTCTGGGAACTAGT+TGG + chr6_2:78831436-78831455 Msa0930040:intron 40.0%
GTCTCTGATACCTGAGAATT+TGG + chr6_2:78831498-78831517 Msa0930040:intron 40.0%
ATTTCCTCAGCATCAACAAC+TGG - chr6_2:78831604-78831623 None:intergenic 40.0%
TTGCCACCAACATACAAGAA+AGG + chr6_2:78831625-78831644 Msa0930040:intron 40.0%
!!! CTCAGTTTTTTTGGTCTTCC+TGG - chr6_2:78831652-78831671 None:intergenic 40.0%
!!! CCCCTTCTTCTCAGTTTTTT+TGG - chr6_2:78831661-78831680 None:intergenic 40.0%
GACTTGCCTCTTATTCTGTT+TGG - chr6_2:78831701-78831720 None:intergenic 40.0%
! TTTTGCAGGATCGGTTGTTA+TGG - chr6_2:78831759-78831778 None:intergenic 40.0%
! TGGTAGTACTTTTGCAGGAT+CGG - chr6_2:78831768-78831787 None:intergenic 40.0%
TTACCAGTAGGTGCATTTCT+TGG - chr6_2:78831924-78831943 None:intergenic 40.0%
ACATCATTCACAGTACCAGT+GGG - chr6_2:78831996-78832015 None:intergenic 40.0%
TTCACATTAACAGCAGACTG+AGG - chr6_2:78832020-78832039 None:intergenic 40.0%
! TTAGCAGGTTGAGACTTCTT+TGG - chr6_2:78832104-78832123 None:intergenic 40.0%
TTTGGTTGAGACTTCTTAGC+AGG - chr6_2:78832119-78832138 None:intergenic 40.0%
GAATCTGGTGCATTTGCATT+TGG - chr6_2:78832191-78832210 None:intergenic 40.0%
GAATCTGGTGCATTTGCATT+TGG - chr6_2:78832191-78832210 None:intergenic 40.0%
CACTTCTTCTAAGTCTGCTT+AGG - chr6_2:78832553-78832572 None:intergenic 40.0%
CTAAGCAGACTTAGAAGAAG+TGG + chr6_2:78832551-78832570 Msa0930040:intron 40.0%
TTTGGTCCTCAACCAAAGTT+TGG + chr6_2:78832587-78832606 Msa0930040:intron 40.0%
ATAGACATAGACAATGGACC+CGG + chr6_2:78832644-78832663 Msa0930040:intron 40.0%
GCAATTACAGACCACTGTAA+AGG - chr6_2:78832858-78832877 None:intergenic 40.0%
AGAGTGAAACGAGAAGATGG+TGG - chr6_2:78826667-78826686 None:intergenic 45.0%
AACTCTTGGGAACTCATGGA+AGG + chr6_2:78826721-78826740 Msa0930040:CDS 45.0%
!! TGGGTCGGTGTTTTCTTTGT+TGG - chr6_2:78826794-78826813 None:intergenic 45.0%
ACCACTTTCTTCTCTCCGTT+CGG - chr6_2:78826889-78826908 None:intergenic 45.0%
!! CAACAACGTTGAGAGGTGTT+CGG + chr6_2:78826917-78826936 Msa0930040:CDS 45.0%
! GACATTTGAGGCTTGCAATG+CGG + chr6_2:78826942-78826961 Msa0930040:CDS 45.0%
GTGACGTTTCGATGGATAGT+GGG + chr6_2:78827007-78827026 Msa0930040:CDS 45.0%
GTGGGTTTAAAGAGGAACTG+AGG + chr6_2:78827025-78827044 Msa0930040:CDS 45.0%
! GGAGCTTCTGAAAGAGAAGA+CGG + chr6_2:78827047-78827066 Msa0930040:CDS 45.0%
GATGTTGAAGGTTGTGGAAG+AGG + chr6_2:78827122-78827141 Msa0930040:CDS 45.0%
! GTTGTGGAAGAGGGTTTGTT+GGG + chr6_2:78827132-78827151 Msa0930040:CDS 45.0%
TTTGTTGGGAGAGGTTCTTC+AGG + chr6_2:78827146-78827165 Msa0930040:CDS 45.0%
TTGTTGGGAGAGGTTCTTCA+GGG + chr6_2:78827147-78827166 Msa0930040:CDS 45.0%
GGTTTGCCAAGAAAAGCTGT+TGG + chr6_2:78827168-78827187 Msa0930040:CDS 45.0%
TTGCCAAGAAAAGCTGTTGG+TGG + chr6_2:78827171-78827190 Msa0930040:CDS 45.0%
TGTTGAACTTGAATGGGGGT+TGG + chr6_2:78827665-78827684 Msa0930040:intron 45.0%
AGAAGGAGAGTCATCAGGAA+TGG - chr6_2:78827762-78827781 None:intergenic 45.0%
! AAGACTGGTGGTGATCTTGA+AGG + chr6_2:78827819-78827838 Msa0930040:intron 45.0%
AAACACAAGCAGGAATGTGC+AGG + chr6_2:78828052-78828071 Msa0930040:intron 45.0%
CCAAGAGCTAAACACTAAGG+AGG - chr6_2:78828113-78828132 None:intergenic 45.0%
!! CCTCCTTAGTGTTTAGCTCT+TGG + chr6_2:78828110-78828129 Msa0930040:intron 45.0%
TCAAAGTGTACTCGGAAGGA+AGG - chr6_2:78828160-78828179 None:intergenic 45.0%
CTCTTGGCTCAAAGTGTACT+CGG - chr6_2:78828168-78828187 None:intergenic 45.0%
TGCAAACCGTCCCTGTAATA+TGG + chr6_2:78828523-78828542 Msa0930040:intron 45.0%
TGCCAAATCACCAACGAAGT+GGG - chr6_2:78828633-78828652 None:intergenic 45.0%
TTGCCAAATCACCAACGAAG+TGG - chr6_2:78828634-78828653 None:intergenic 45.0%
!! ACTTCGTTGGTGATTTGGCA+AGG + chr6_2:78828633-78828652 Msa0930040:intron 45.0%
! TTGGTGATTTGGCAAGGTTC+TGG + chr6_2:78828639-78828658 Msa0930040:intron 45.0%
! TGGTGATTTGGCAAGGTTCT+GGG + chr6_2:78828640-78828659 Msa0930040:intron 45.0%
AGGAGAAAGGGAGGGAAAAT+TGG + chr6_2:78828824-78828843 Msa0930040:intron 45.0%
AGGGAGGGAAAATTGGATCT+AGG + chr6_2:78828831-78828850 Msa0930040:intron 45.0%
GGGAGGGAAAATTGGATCTA+GGG + chr6_2:78828832-78828851 Msa0930040:intron 45.0%
TGTTGGACAGAAGAAGGAGA+AGG - chr6_2:78828886-78828905 None:intergenic 45.0%
! GCCTTTGGAAGCTTAATCGA+CGG + chr6_2:78829008-78829027 Msa0930040:CDS 45.0%
! TCCGTCGATTAAGCTTCCAA+AGG - chr6_2:78829012-78829031 None:intergenic 45.0%
TTGGAAGCTTAATCGACGGA+TGG + chr6_2:78829012-78829031 Msa0930040:CDS 45.0%
TGGAAGCTTAATCGACGGAT+GGG + chr6_2:78829013-78829032 Msa0930040:CDS 45.0%
TTGAGTCTGACGTCCTTGAA+AGG + chr6_2:78829042-78829061 Msa0930040:CDS 45.0%
! ACCGTAGCTTTTCATCATGG+AGG + chr6_2:78829229-78829248 Msa0930040:CDS 45.0%
CCCTCCATGATGAAAAGCTA+CGG - chr6_2:78829233-78829252 None:intergenic 45.0%
! CCGTAGCTTTTCATCATGGA+GGG + chr6_2:78829230-78829249 Msa0930040:CDS 45.0%
! GAGGGTTATTTGTTAGGGAC+TGG + chr6_2:78829248-78829267 Msa0930040:CDS 45.0%
! GGAAAAGGTATAGGATGTGG+TGG + chr6_2:78829383-78829402 Msa0930040:CDS 45.0%
! AAGGTATAGGATGTGGTGGA+AGG + chr6_2:78829387-78829406 Msa0930040:CDS 45.0%
GAATAGCAGTTGTAAGGGGA+AGG + chr6_2:78829585-78829604 Msa0930040:CDS 45.0%
!! GATGATGAGGAAGTTGATGC+TGG + chr6_2:78829634-78829653 Msa0930040:CDS 45.0%
GATGACAGTGAAGAAGAGAG+AGG + chr6_2:78829703-78829722 Msa0930040:CDS 45.0%
AGAGAGAGGTTTAGGAATGG+AGG + chr6_2:78829717-78829736 Msa0930040:CDS 45.0%
AGAGGTTTAGGAATGGAGGA+TGG + chr6_2:78829721-78829740 Msa0930040:CDS 45.0%
GAGGTTTAGGAATGGAGGAT+GGG + chr6_2:78829722-78829741 Msa0930040:CDS 45.0%
! TTAGGAATGGAGGATGGGTT+TGG + chr6_2:78829727-78829746 Msa0930040:CDS 45.0%
TGATCAGGGTCAGTAGTACT+TGG - chr6_2:78829787-78829806 None:intergenic 45.0%
AGAATCATCAGGGTCAGAAC+TGG - chr6_2:78829878-78829897 None:intergenic 45.0%
TGACCCTGATGATTCTGATG+AGG + chr6_2:78829882-78829901 Msa0930040:CDS 45.0%
TAAGTCCCTAGCTGAGTTCA+AGG + chr6_2:78829981-78830000 Msa0930040:CDS 45.0%
ACATGGGAGGGAGTTTAAGA+TGG + chr6_2:78830029-78830048 Msa0930040:CDS 45.0%
ATGAGAAGGAACCATGGAGT+GGG + chr6_2:78830294-78830313 Msa0930040:CDS 45.0%
! AGTGGGAATCACCTTTGGAA+GGG + chr6_2:78830311-78830330 Msa0930040:CDS 45.0%
AGCTGCATACCTCCATATCA+GGG - chr6_2:78830397-78830416 None:intergenic 45.0%
GGTATGCAGCTGAGTTAAAG+AGG + chr6_2:78830406-78830425 Msa0930040:CDS 45.0%
! CCAAATCTGGGTTGAAGTGT+TGG - chr6_2:78830477-78830496 None:intergenic 45.0%
CCAACACTTCAACCCAGATT+TGG + chr6_2:78830474-78830493 Msa0930040:intron 45.0%
CACCCATCTACTCCTATGAA+TGG - chr6_2:78830555-78830574 None:intergenic 45.0%
!! ATGGGTGTCACTTGAAGACT+AGG + chr6_2:78830568-78830587 Msa0930040:intron 45.0%
CACTTGAAGACTAGGTATGG+TGG + chr6_2:78830576-78830595 Msa0930040:intron 45.0%
!!! AGCTTTTGGGGTAGTTGAAG+TGG + chr6_2:78830650-78830669 Msa0930040:intron 45.0%
! GTCTGTGTTTGATGACTTGC+TGG + chr6_2:78830874-78830893 Msa0930040:intron 45.0%
!! TGTGTTTGATGACTTGCTGG+AGG + chr6_2:78830877-78830896 Msa0930040:intron 45.0%
AGGCAATTGATGAAGGAGCA+TGG + chr6_2:78831044-78831063 Msa0930040:intron 45.0%
! GGCAATTGATGAAGGAGCAT+GGG + chr6_2:78831045-78831064 Msa0930040:intron 45.0%
! TTGATGAAGGAGCATGGGAT+TGG + chr6_2:78831050-78831069 Msa0930040:intron 45.0%
AACTAGTTGGCATCCCATGT+AGG + chr6_2:78831449-78831468 Msa0930040:intron 45.0%
CAATCAATGGGCAAGACATG+TGG + chr6_2:78831578-78831597 Msa0930040:intron 45.0%
GGACCTTTCTTGTATGTTGG+TGG - chr6_2:78831631-78831650 None:intergenic 45.0%
CCTGGACCTTTCTTGTATGT+TGG - chr6_2:78831634-78831653 None:intergenic 45.0%
CCAACATACAAGAAAGGTCC+AGG + chr6_2:78831631-78831650 Msa0930040:intron 45.0%
CTCTTATTCTGTTTGGGCTC+AGG - chr6_2:78831694-78831713 None:intergenic 45.0%
CTGAGCCCAAACAGAATAAG+AGG + chr6_2:78831692-78831711 Msa0930040:intron 45.0%
TGTACCAAATGTGGCCAGTT+TGG + chr6_2:78831733-78831752 Msa0930040:intron 45.0%
ATCGGTTGTTATGGCCAAAC+TGG - chr6_2:78831750-78831769 None:intergenic 45.0%
TTCACATTACCAGTAGGTGC+AGG - chr6_2:78831930-78831949 None:intergenic 45.0%
CACATCATTCACAGTACCAG+TGG - chr6_2:78831997-78832016 None:intergenic 45.0%
ATGTGATCAGCAGTTGTTGC+AGG - chr6_2:78832164-78832183 None:intergenic 45.0%
ATGTGATCAGCAGTTGTTGC+AGG - chr6_2:78832164-78832183 None:intergenic 45.0%
! TGGTCTTTGCTCTCTTTTGC+AGG - chr6_2:78832460-78832479 None:intergenic 45.0%
GAGCAAAGACCACAATGTCA+TGG + chr6_2:78832468-78832487 Msa0930040:CDS 45.0%
AAGACCACAATGTCATGGCA+TGG + chr6_2:78832473-78832492 Msa0930040:CDS 45.0%
AGACCACAATGTCATGGCAT+GGG + chr6_2:78832474-78832493 Msa0930040:CDS 45.0%
!! AGTCTGCTTAGGTTGAGCTT+TGG - chr6_2:78832542-78832561 None:intergenic 45.0%
! AGTGGAAGAACCTGCTACTT+TGG + chr6_2:78832569-78832588 Msa0930040:intron 45.0%
AGTCTCTTGAGTTAGCTCAC+CGG - chr6_2:78832666-78832685 None:intergenic 45.0%
AACTCAAGAGACTGCTGTAG+TGG + chr6_2:78832673-78832692 Msa0930040:intron 45.0%
!!! TTTAAAATTTTTTTTTTACA+GGG - chr6_2:78828567-78828586 None:intergenic 5.0%
!!! ATTTAAAATTTTTTTTTTAC+AGG - chr6_2:78828568-78828587 None:intergenic 5.0%
! GTGAAACGAGAAGATGGTGG+AGG - chr6_2:78826664-78826683 None:intergenic 50.0%
! TGATTTCAGGTGGTTCGGAG+CGG - chr6_2:78826699-78826718 None:intergenic 50.0%
TTGGAAGAAGGGGTGAGAAG+CGG - chr6_2:78826765-78826784 None:intergenic 50.0%
!! AAAACCCGGTTCGGCTCTTT+CGG + chr6_2:78826840-78826859 Msa0930040:CDS 50.0%
!! CTCTTTCGGATCGGTTTGAG+AGG + chr6_2:78826854-78826873 Msa0930040:CDS 50.0%
GAGAGGATATGTCCACCGAA+CGG + chr6_2:78826871-78826890 Msa0930040:CDS 50.0%
ACTTTCTTCTCTCCGTTCGG+TGG - chr6_2:78826886-78826905 None:intergenic 50.0%
ACCGAACGGAGAGAAGAAAG+TGG + chr6_2:78826885-78826904 Msa0930040:CDS 50.0%
AGGTGTTCGGAGGACATTTG+AGG + chr6_2:78826930-78826949 Msa0930040:CDS 50.0%
CGTGACGTTTCGATGGATAG+TGG + chr6_2:78827006-78827025 Msa0930040:CDS 50.0%
! GCTTCTGAAAGAGAAGACGG+TGG + chr6_2:78827050-78827069 Msa0930040:CDS 50.0%
! CGGTGCTGAAGAGATGTTGA+AGG + chr6_2:78827110-78827129 Msa0930040:CDS 50.0%
GGTTGTGGAAGAGGGTTTGT+TGG + chr6_2:78827131-78827150 Msa0930040:CDS 50.0%
! CCTCCACCAACAGCTTTTCT+TGG - chr6_2:78827177-78827196 None:intergenic 50.0%
! CCAAGAAAAGCTGTTGGTGG+AGG + chr6_2:78827174-78827193 Msa0930040:CDS 50.0%
!! TGTTGGTGGAGGTGTTTGTG+AGG + chr6_2:78827185-78827204 Msa0930040:CDS 50.0%
!! GTTGGTGGAGGTGTTTGTGA+GGG + chr6_2:78827186-78827205 Msa0930040:CDS 50.0%
ATCCTCCACAGAGACAATCC+AGG + chr6_2:78827706-78827725 Msa0930040:intron 50.0%
ATAAACCACACTCCTGGTCC+TGG - chr6_2:78827727-78827746 None:intergenic 50.0%
ATGACTCTCCTTCTGCCACA+TGG + chr6_2:78827768-78827787 Msa0930040:intron 50.0%
GCACTTTACCATGTGGCAGA+AGG - chr6_2:78827779-78827798 None:intergenic 50.0%
CACTAAGGAGGGTAGAGAGA+AGG - chr6_2:78828101-78828120 None:intergenic 50.0%
TGGCTCAAAGTGTACTCGGA+AGG - chr6_2:78828164-78828183 None:intergenic 50.0%
ATGCGGCCATATTACAGGGA+CGG - chr6_2:78828532-78828551 None:intergenic 50.0%
GCCAAATCACCAACGAAGTG+GGG - chr6_2:78828632-78828651 None:intergenic 50.0%
ACTGTGCAACTTATGCCACG+TGG + chr6_2:78828680-78828699 Msa0930040:intron 50.0%
CGACGTTGTTGGACAGAAGA+AGG - chr6_2:78828892-78828911 None:intergenic 50.0%
ATCGCGTTTGGTCAGATCGA+CGG + chr6_2:78828938-78828957 Msa0930040:intron 50.0%
!! GATGAGGAAGTTGATGCTGG+TGG + chr6_2:78829637-78829656 Msa0930040:CDS 50.0%
GGCTTCCTTGAACTCAGCTA+GGG - chr6_2:78829989-78830008 None:intergenic 50.0%
TCAAGGAAGCCCTTACTGAG+TGG + chr6_2:78829998-78830017 Msa0930040:CDS 50.0%
ATGTGTCCTTGGCACATGTG+TGG - chr6_2:78830179-78830198 None:intergenic 50.0%
CATGAGAAGGAACCATGGAG+TGG + chr6_2:78830293-78830312 Msa0930040:CDS 50.0%
CAAAGGTGATTCCCACTCCA+TGG - chr6_2:78830308-78830327 None:intergenic 50.0%
CATGGAGTGGGAATCACCTT+TGG + chr6_2:78830306-78830325 Msa0930040:CDS 50.0%
GAGTGGGAATCACCTTTGGA+AGG + chr6_2:78830310-78830329 Msa0930040:CDS 50.0%
GAGAGCAAAGAAGAGGGCAA+AGG + chr6_2:78830338-78830357 Msa0930040:CDS 50.0%
CAGCTGCATACCTCCATATC+AGG - chr6_2:78830398-78830417 None:intergenic 50.0%
AGTGGGTGCAGACCATTCAT+AGG + chr6_2:78830540-78830559 Msa0930040:intron 50.0%
CAGCTATGGCATGCCTACAT+GGG - chr6_2:78831465-78831484 None:intergenic 50.0%
TAGGCATGCCATAGCTGCTA+TGG + chr6_2:78831468-78831487 Msa0930040:intron 50.0%
AGGCATGCCATAGCTGCTAT+GGG + chr6_2:78831469-78831488 Msa0930040:intron 50.0%
CCTTCTACCCATAGCAGCTA+TGG - chr6_2:78831479-78831498 None:intergenic 50.0%
CCATAGCTGCTATGGGTAGA+AGG + chr6_2:78831476-78831495 Msa0930040:intron 50.0%
TGTTTGGGCTCAGGTTCATC+AGG - chr6_2:78831685-78831704 None:intergenic 50.0%
ATGGCCAAACTGGCCACATT+TGG - chr6_2:78831740-78831759 None:intergenic 50.0%
CCAGTAGGTGCATTTCTTGG+TGG - chr6_2:78831921-78831940 None:intergenic 50.0%
CCACCAAGAAATGCACCTAC+TGG + chr6_2:78831918-78831937 Msa0930040:intron 50.0%
AATGATGTGCCTGCACCTAC+TGG + chr6_2:78831948-78831967 Msa0930040:intron 50.0%
TGTGCAGGCACATTAACAGC+AGG - chr6_2:78832053-78832072 None:intergenic 50.0%
ATGCTCCTGCTACTGGTAGA+AGG + chr6_2:78832072-78832091 Msa0930040:CDS 50.0%
TGAGACCTTCTACCAGTAGC+AGG - chr6_2:78832080-78832099 None:intergenic 50.0%
GTTGTTGCAGGTGCAGAATC+TGG - chr6_2:78832206-78832225 None:intergenic 50.0%
GTTGTTGCAGGTGCAGAATC+TGG - chr6_2:78832206-78832225 None:intergenic 50.0%
CCATGAACAGCAGTTGTTGC+AGG - chr6_2:78832272-78832291 None:intergenic 50.0%
CCTGCAACAACTGCTGTTCA+TGG + chr6_2:78832269-78832288 Msa0930040:CDS 50.0%
GACCACAATGTCATGGCATG+GGG + chr6_2:78832475-78832494 Msa0930040:CDS 50.0%
TACCCCATGCCATGACATTG+TGG - chr6_2:78832480-78832499 None:intergenic 50.0%
CAATGTCATGGCATGGGGTA+AGG + chr6_2:78832480-78832499 Msa0930040:intron 50.0%
TGGTTGAGGACCAAAGTAGC+AGG - chr6_2:78832582-78832601 None:intergenic 50.0%
GGTGCTCCAAACTTTGGTTG+AGG - chr6_2:78832596-78832615 None:intergenic 50.0%
! CAACCAAAGTTTGGAGCACC+AGG + chr6_2:78832596-78832615 Msa0930040:intron 50.0%
GTTCCTGGTGCTCCAAACTT+TGG - chr6_2:78832602-78832621 None:intergenic 50.0%
GTCTCTTGAGTTAGCTCACC+GGG - chr6_2:78832665-78832684 None:intergenic 50.0%
!! AGGTGCCGAACTCGTCTTCA+TGG - chr6_2:78826561-78826580 None:intergenic 55.0%
GTTGAGAAGGCCGTAAGTGG+TGG - chr6_2:78826623-78826642 None:intergenic 55.0%
! GGTGTTGAGAAGGCCGTAAG+TGG - chr6_2:78826626-78826645 None:intergenic 55.0%
!! GTGGATCGAGGGTGTTGAGA+AGG - chr6_2:78826636-78826655 None:intergenic 55.0%
!! CGAGAAGATGGTGGAGGAGT+GGG - chr6_2:78826658-78826677 None:intergenic 55.0%
!! ACGAGAAGATGGTGGAGGAG+TGG - chr6_2:78826659-78826678 None:intergenic 55.0%
GGGTGAGAAGCGGAAGCTTT+CGG - chr6_2:78826755-78826774 None:intergenic 55.0%
!! CAACGTTGAGAGGTGTTCGG+AGG + chr6_2:78826920-78826939 Msa0930040:CDS 55.0%
!! TCCGCCGAGAGTGTTTGTGA+AGG + chr6_2:78827074-78827093 Msa0930040:CDS 55.0%
CCCTTCACAAACACTCTCGG+CGG - chr6_2:78827078-78827097 None:intergenic 55.0%
!! CCGCCGAGAGTGTTTGTGAA+GGG + chr6_2:78827075-78827094 Msa0930040:CDS 55.0%
!! GGAAGAGGGTTTGTTGGGAG+AGG + chr6_2:78827137-78827156 Msa0930040:CDS 55.0%
!! GGAGGTGTTTGTGAGGGTTG+CGG + chr6_2:78827192-78827211 Msa0930040:CDS 55.0%
GTCCTGGATTGTCTCTGTGG+AGG - chr6_2:78827711-78827730 None:intergenic 55.0%
CTGGTCCTGGATTGTCTCTG+TGG - chr6_2:78827714-78827733 None:intergenic 55.0%
CACAGAGACAATCCAGGACC+AGG + chr6_2:78827712-78827731 Msa0930040:intron 55.0%
ACAATCCAGGACCAGGAGTG+TGG + chr6_2:78827719-78827738 Msa0930040:intron 55.0%
GTGGCAGAAGGAGAGTCATC+AGG - chr6_2:78827767-78827786 None:intergenic 55.0%
!! GCCCCACTTCGTTGGTGATT+TGG + chr6_2:78828628-78828647 Msa0930040:intron 55.0%
TCATCCTCCTGCATCGCGTT+TGG + chr6_2:78828926-78828945 Msa0930040:intron 55.0%
GATCTGACCAAACGCGATGC+AGG - chr6_2:78828936-78828955 None:intergenic 55.0%
GGGCTTCCTTGAACTCAGCT+AGG - chr6_2:78829990-78830009 None:intergenic 55.0%
TGGGTGACCAACACACGTAC+AGG + chr6_2:78830133-78830152 Msa0930040:CDS 55.0%
! GAATCACCTTTGGAAGGGCC+TGG + chr6_2:78830316-78830335 Msa0930040:CDS 55.0%
GGCCTGGAGAGCAAAGAAGA+GGG + chr6_2:78830332-78830351 Msa0930040:CDS 55.0%
TGCCCTCTTCTTTGCTCTCC+AGG - chr6_2:78830337-78830356 None:intergenic 55.0%
!! CTGGGTTGAAGTGTTGGTGC+TGG - chr6_2:78830471-78830490 None:intergenic 55.0%
!! ATGGTGGAGGTGCTGCAATC+AGG + chr6_2:78830954-78830973 Msa0930040:intron 55.0%
GCAGCTATGGCATGCCTACA+TGG - chr6_2:78831466-78831485 None:intergenic 55.0%
GTGGCCAGTTGTTGATGCTG+AGG + chr6_2:78831597-78831616 Msa0930040:intron 55.0%
AATGATGTGCCTGCACCCAC+TGG + chr6_2:78831978-78831997 Msa0930040:intron 55.0%
TTCACAGTACCAGTGGGTGC+AGG - chr6_2:78831990-78832009 None:intergenic 55.0%
GGCACATTAACAGCAGGCTG+AGG - chr6_2:78832047-78832066 None:intergenic 55.0%
GTTGTTGCAGGTGCAGAGTC+TGG - chr6_2:78832152-78832171 None:intergenic 55.0%
ATGGCATGGGGTAAGGTGTG+AGG + chr6_2:78832487-78832506 Msa0930040:intron 55.0%
GAGTTCGGCACCTCAGCACT+CGG + chr6_2:78826568-78826587 Msa0930040:CDS 60.0%
TGGAGGAGTGGGTGGATCGA+GGG - chr6_2:78826647-78826666 None:intergenic 60.0%
!! GAAGATGGTGGAGGAGTGGG+TGG - chr6_2:78826655-78826674 None:intergenic 60.0%
! TTCAGGTGGTTCGGAGCGGA+GGG - chr6_2:78826695-78826714 None:intergenic 60.0%
! TTTCAGGTGGTTCGGAGCGG+AGG - chr6_2:78826696-78826715 None:intergenic 60.0%
!! AGCGGAAGCTTTCGGTGTCG+AGG - chr6_2:78826747-78826766 None:intergenic 60.0%
CGATCCGAAAGAGCCGAACC+GGG - chr6_2:78826847-78826866 None:intergenic 60.0%
CCGATCCGAAAGAGCCGAAC+CGG - chr6_2:78826848-78826867 None:intergenic 60.0%
!! CCGGTTCGGCTCTTTCGGAT+CGG + chr6_2:78826845-78826864 Msa0930040:CDS 60.0%
CTGCGAGCGTGACGTTTCGA+TGG + chr6_2:78826999-78827018 Msa0930040:CDS 60.0%
TCACCAACGAAGTGGGGCCA+GGG - chr6_2:78828626-78828645 None:intergenic 60.0%
ATCACCAACGAAGTGGGGCC+AGG - chr6_2:78828627-78828646 None:intergenic 60.0%
CACAGTCAGCAACTGCCACG+TGG - chr6_2:78828666-78828685 None:intergenic 60.0%
CTGACCAAACGCGATGCAGG+AGG - chr6_2:78828933-78828952 None:intergenic 60.0%
GACGGTTGGGATTGCGCCTT+TGG + chr6_2:78828993-78829012 Msa0930040:CDS 60.0%
TGGGGACCACACATGTGCCA+AGG + chr6_2:78830170-78830189 Msa0930040:CDS 60.0%
TGCTCTCCAGGCCCTTCCAA+AGG - chr6_2:78830325-78830344 None:intergenic 60.0%
GGGCCTGGAGAGCAAAGAAG+AGG + chr6_2:78830331-78830350 Msa0930040:CDS 60.0%
! CCAGTAGCAGGAGCATGTGC+AGG - chr6_2:78832068-78832087 None:intergenic 60.0%
CCTGCACATGCTCCTGCTAC+TGG + chr6_2:78832065-78832084 Msa0930040:CDS 60.0%
!! GGCACCTCAGCACTCGGTGT+CGG + chr6_2:78826574-78826593 Msa0930040:CDS 65.0%
GTGGAGGAGTGGGTGGATCG+AGG - chr6_2:78826648-78826667 None:intergenic 65.0%
! TCAGGTGGTTCGGAGCGGAG+GGG - chr6_2:78826694-78826713 None:intergenic 65.0%
AGTCCCTGGCCCCACTTCGT+TGG + chr6_2:78828620-78828639 Msa0930040:intron 65.0%
!! TGGCAAGGTTCTGGGCCACG+TGG + chr6_2:78828648-78828667 Msa0930040:intron 65.0%
!! TATGCCACGTGGCGCTGACG+TGG + chr6_2:78828691-78828710 Msa0930040:intron 65.0%
TATGCCACGTCAGCGCCACG+TGG - chr6_2:78828698-78828717 None:intergenic 65.0%
! GTGGCCGACACCGAGTGCTG+AGG - chr6_2:78826581-78826600 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 78826529 78832881 78826529 ID=Msa0930040;Name=Msa0930040
chr6_2 mRNA 78826529 78832881 78826529 ID=Msa0930040-mRNA-1;Parent=Msa0930040;Name=Msa0930040-mRNA-1;_AED=0.29;_eAED=0.30;_QI=0|0|0|0.33|1|1|6|0|839
chr6_2 exon 78826529 78827325 78826529 ID=Msa0930040-mRNA-1:exon:13378;Parent=Msa0930040-mRNA-1
chr6_2 exon 78828953 78829063 78828953 ID=Msa0930040-mRNA-1:exon:13379;Parent=Msa0930040-mRNA-1
chr6_2 exon 78829219 78830428 78829219 ID=Msa0930040-mRNA-1:exon:13380;Parent=Msa0930040-mRNA-1
chr6_2 exon 78832023 78832331 78832023 ID=Msa0930040-mRNA-1:exon:13381;Parent=Msa0930040-mRNA-1
chr6_2 exon 78832422 78832496 78832422 ID=Msa0930040-mRNA-1:exon:13382;Parent=Msa0930040-mRNA-1
chr6_2 exon 78832864 78832881 78832864 ID=Msa0930040-mRNA-1:exon:13383;Parent=Msa0930040-mRNA-1
chr6_2 CDS 78826529 78827325 78826529 ID=Msa0930040-mRNA-1:cds;Parent=Msa0930040-mRNA-1
chr6_2 CDS 78828953 78829063 78828953 ID=Msa0930040-mRNA-1:cds;Parent=Msa0930040-mRNA-1
chr6_2 CDS 78829219 78830428 78829219 ID=Msa0930040-mRNA-1:cds;Parent=Msa0930040-mRNA-1
chr6_2 CDS 78832023 78832331 78832023 ID=Msa0930040-mRNA-1:cds;Parent=Msa0930040-mRNA-1
chr6_2 CDS 78832422 78832496 78832422 ID=Msa0930040-mRNA-1:cds;Parent=Msa0930040-mRNA-1
chr6_2 CDS 78832864 78832881 78832864 ID=Msa0930040-mRNA-1:cds;Parent=Msa0930040-mRNA-1
Gene Sequence

>Msa0930040

ATGGGTTGCGTGTCTTCACATCTGTTGAACCATGAAGACGAGTTCGGCACCTCAGCACTCGGTGTCGGCCACCACATCGTCTCTTTAACTTCCACCACTTACGGCCTTCTCAACACCCTCGATCCACCCACTCCTCCACCATCTTCTCGTTTCACTCTCAAACCCCTCCGCTCCGAACCACCTGAAATCATTAACTCTTGGGAACTCATGGAAGGCCTCGACACCGAAAGCTTCCGCTTCTCACCCCTTCTTCCAAAACCATCCAACAAAGAAAACACCGACCCAAACCTAAACCTAAACCTTGCTTTGAAAAAACCCGGTTCGGCTCTTTCGGATCGGTTTGAGAGGATATGTCCACCGAACGGAGAGAAGAAAGTGGTGATCTATACAACAACGTTGAGAGGTGTTCGGAGGACATTTGAGGCTTGCAATGCGGTGAGAGCAGCTTTTGATGCATTTGGTGTACAAATCTGCGAGCGTGACGTTTCGATGGATAGTGGGTTTAAAGAGGAACTGAGGGAGCTTCTGAAAGAGAAGACGGTGGTTCCGCCGAGAGTGTTTGTGAAGGGATACTATATTGGCGGTGCTGAAGAGATGTTGAAGGTTGTGGAAGAGGGTTTGTTGGGAGAGGTTCTTCAGGGTTTGCCAAGAAAAGCTGTTGGTGGAGGTGTTTGTGAGGGTTGCGGTGATATGAGATTCTTGCCTTGTTTTCGATGTAACGGAAGCTGTAAGATGGTGAGTAAACAGAAACAGGGGAACACTGTTGTTGTTAAGTGTAGTGATTGTAATGAAAATGGATCGACGGTTCAGATATTGTCTGCGAAAGTTGTGGAATTTGACGGTTGGGATTGCGCCTTTGGAAGCTTAATCGACGGATGGGAGTCATTTGAGTCTGACGTCCTTGAAAGCATGTCTATTACCGTAGCTTTTCATCATGGAGGGTTATTTGTTAGGGACTGGTTGATATGTTACAAAGGTGGTGAAGAATCAGTGTTTGATTTAGATGTTGATAAGTGGTGTTATTTTGAACTAGAAGGGTATGCAAATGATTTACAGAAACAATATAATTATGGGAAAAGGTATAGGATGTGGTGGAAGGTTGAAGAAGAAGTTGATTTCAAGTTAGTTAGGTTAGATGAAGATGCTGTAGTAATGAAGGAGTATGCTAGTAAGAAGAAATGTAAGCTTGATGTATTCATTGAGCATGATGTTGTTGAAAGTGATGGTGGTGTTGTTAATGTTCCTAACTGTATAGAAGAATCTGAACCTGTTAAGAATAGCAGTTGTAAGGGGAAGGAAAAAGTGGTTGAAAGTGAAGGTTCTGATGATGAGGAAGTTGATGCTGGTGGATATAGTTGTGATGAAGATTCTGATGTTAGAGGAGACAGGTTTGATGACAGTGAAGAAGAGAGAGGTTTAGGAATGGAGGATGGGTTTGGTTTAGCTGATTCTAATTATCTCATGATTGAAGGTCCAAGTACTACTGACCCTGATCAAAGAAATAGAGATGAGAAGTTTGATGATGGGGTTGAAATAGATGGTGATTATGAAAGTGATTCATTGGCCAGTTCTGACCCTGATGATTCTGATGAGGAAAAAGGTCCAAGATATGAAAAGTTTAGGATGGAACAGCTTAACAAAAAATTCAAGTACAAGGTTGGCATGGAGTTTAAGTCCCTAGCTGAGTTCAAGGAAGCCCTTACTGAGTGGAATGTAATACATGGGAGGGAGTTTAAGATGGTGAAAAATGACAATGAAAGGATTAGGGCAGTTTGCAATCATAAAGTGAATAAATGTGATTTTGTTGCTTTATGTAGTCAAGTGGGTGACCAACACACGTACAGGATTAAAACATGGAGTGGGGACCACACATGTGCCAAGGACACATATATTAGATCTGCTACTTCCAAGTGGGTTACAAAAGTACAACTTCCAAAGATAATGTGTACTGAGAAAATAAGTGTAAAAGACATCATGAAAGACATGAGAAGGAACCATGGAGTGGGAATCACCTTTGGAAGGGCCTGGAGAGCAAAGAAGAGGGCAAAGGAGATTATTGAAGGTGAGGCTGCAAAACAGTATACCCTGATATGGAGGTATGCAGCTGAGTTAAAGAGGTCTGCTGTTAATGTGAATGTGCCTCAGCCTGCTGTTAATGTGCCTGCACATGCTCCTGCTACTGGTAGAAGGTCTCAGCCAAAGAAGTCTCAACCTGCTAAGAAGTCTCAACCAAATGAAAATACACCAGACTCTGCACCTGCAACAACTGCTGATCACATAGCACCAAATGCAAATGCACCAGATTCTGCACCTGCAACAACTGCTGATCACATAGCACCAAATGCAAATGCACCAGATTCTGCACCTGCAACAACTGCTGTTCATGGTGCATCAAATGCAAATGCACCATTTAAACCACCAAACAAGAAAAAACATGCTGAGATGGTGTATGATGTTACACACCTGCAAAAGAGAGCAAAGACCACAATGTCATGGCATGGGTGGTCTGTAATTGCTTGA
Protein sequence

>Msa0930040

MGCVSSHLLNHEDEFGTSALGVGHHIVSLTSTTYGLLNTLDPPTPPPSSRFTLKPLRSEPPEIINSWELMEGLDTESFRFSPLLPKPSNKENTDPNLNLNLALKKPGSALSDRFERICPPNGEKKVVIYTTTLRGVRRTFEACNAVRAAFDAFGVQICERDVSMDSGFKEELRELLKEKTVVPPRVFVKGYYIGGAEEMLKVVEEGLLGEVLQGLPRKAVGGGVCEGCGDMRFLPCFRCNGSCKMVSKQKQGNTVVVKCSDCNENGSTVQILSAKVVEFDGWDCAFGSLIDGWESFESDVLESMSITVAFHHGGLFVRDWLICYKGGEESVFDLDVDKWCYFELEGYANDLQKQYNYGKRYRMWWKVEEEVDFKLVRLDEDAVVMKEYASKKKCKLDVFIEHDVVESDGGVVNVPNCIEESEPVKNSSCKGKEKVVESEGSDDEEVDAGGYSCDEDSDVRGDRFDDSEEERGLGMEDGFGLADSNYLMIEGPSTTDPDQRNRDEKFDDGVEIDGDYESDSLASSDPDDSDEEKGPRYEKFRMEQLNKKFKYKVGMEFKSLAEFKEALTEWNVIHGREFKMVKNDNERIRAVCNHKVNKCDFVALCSQVGDQHTYRIKTWSGDHTCAKDTYIRSATSKWVTKVQLPKIMCTEKISVKDIMKDMRRNHGVGITFGRAWRAKKRAKEIIEGEAAKQYTLIWRYAAELKRSAVNVNVPQPAVNVPAHAPATGRRSQPKKSQPAKKSQPNENTPDSAPATTADHIAPNANAPDSAPATTADHIAPNANAPDSAPATTAVHGASNANAPFKPPNKKKHAEMVYDVTHLQKRAKTTMSWHGWSVIA*