AlfalfaGEDB | Msa1231490

M. sativa cultivar zhongmu-4 / Msa1231490

KEGG: -
GO: GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
PFAM: PF00320.30

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1231490	XP_003627002.1	97.681	345	5	1	1	345	1	342	0.0	702

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1231490	sp\|O82632\|GATA9_ARATH	47.561	328	122	13	33	345	16	308	6.26e-80	249

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1231490	G7LFY2	97.681	345	5	1	1	345	1	342	0.0	702

TFs/TRs:

Gene ID	Type	Classification
Msa1231490	TF	C2C2-GATA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0004590	Msa1231490	0.803417	3.521069e-49	-8.615850e-47
Msa0006840	Msa1231490	0.846276	2.403695e-59	-8.615850e-47
Msa0013410	Msa1231490	0.801053	1.079414e-48	-8.615850e-47
Msa0032130	Msa1231490	0.802078	6.652309e-49	-8.615850e-47
Msa0036810	Msa1231490	0.813122	3.003527e-51	-8.615850e-47
Msa0045620	Msa1231490	0.875900	2.138573e-68	-8.615850e-47
Msa0050530	Msa1231490	0.826368	2.819044e-54	-8.615850e-47
Msa0057860	Msa1231490	0.801719	7.886351e-49	-8.615850e-47
Msa0063190	Msa1231490	0.833944	3.985696e-56	-8.615850e-47
Msa0080370	Msa1231490	0.802373	5.786597e-49	-8.615850e-47
Msa0080440	Msa1231490	0.806765	7.018574e-50	-8.615850e-47
Msa0100600	Msa1231490	0.830237	3.288452e-55	-8.615850e-47
Msa0100890	Msa1231490	0.835551	1.571550e-56	-8.615850e-47
Msa0102920	Msa1231490	0.807306	5.390259e-50	-8.615850e-47
Msa0605520	Msa1231490	0.822354	2.477810e-53	-8.615850e-47
Msa0623310	Msa1231490	0.859960	2.880442e-63	-8.615850e-47
Msa0626980	Msa1231490	0.845293	4.445399e-59	-8.615850e-47
Msa0627360	Msa1231490	0.842908	1.940255e-58	-8.615850e-47
Msa0658120	Msa1231490	0.810786	9.694759e-51	-8.615850e-47
Msa0663290	Msa1231490	0.801574	8.443013e-49	-8.615850e-47
Msa0673940	Msa1231490	0.843895	1.057486e-58	-8.615850e-47
Msa0676200	Msa1231490	0.810976	8.816022e-51	-8.615850e-47
Msa0687370	Msa1231490	0.822916	1.833267e-53	-8.615850e-47
Msa0689830	Msa1231490	0.803851	2.861241e-49	-8.615850e-47
Msa0702970	Msa1231490	0.805094	1.576091e-49	-8.615850e-47
Msa0708020	Msa1231490	0.800484	1.410248e-48	-8.615850e-47
Msa0714320	Msa1231490	0.804021	2.638767e-49	-8.615850e-47
Msa0732970	Msa1231490	0.800362	1.493650e-48	-8.615850e-47
Msa0751720	Msa1231490	0.833089	6.513466e-56	-8.615850e-47
Msa0756330	Msa1231490	0.805502	1.294276e-49	-8.615850e-47
Msa0764770	Msa1231490	0.810164	1.320740e-50	-8.615850e-47
Msa0771910	Msa1231490	0.801935	7.120564e-49	-8.615850e-47
Msa0831820	Msa1231490	0.843771	1.141634e-58	-8.615850e-47
Msa0835750	Msa1231490	0.802828	4.662525e-49	-8.615850e-47
Msa0147680	Msa1231490	0.829079	6.292381e-55	-8.615850e-47
Msa0185690	Msa1231490	0.802898	4.508345e-49	-8.615850e-47
Msa0206370	Msa1231490	0.810967	8.859243e-51	-8.615850e-47
Msa0221180	Msa1231490	0.803654	3.143969e-49	-8.615850e-47
Msa1231490	Msa1240940	0.818022	2.435220e-52	-8.615850e-47
Msa1231490	Msa1265570	0.802097	6.594940e-49	-8.615850e-47
Msa1231490	Msa1278030	0.869688	2.567772e-66	-8.615850e-47
Msa1231490	Msa1282300	0.831708	1.432531e-55	-8.615850e-47
Msa1231490	Msa1297070	0.816008	6.900435e-52	-8.615850e-47
Msa1231490	Msa1312240	0.841603	4.300058e-58	-8.615850e-47
Msa1231490	Msa1328870	0.815705	8.061143e-52	-8.615850e-47
Msa1231490	Msa1342760	0.814010	1.915159e-51	-8.615850e-47
Msa1231490	Msa1356450	0.807292	5.427700e-50	-8.615850e-47
Msa1231490	Msa1362590	0.807854	4.124050e-50	-8.615850e-47
Msa1231490	Msa1368170	0.830763	2.444720e-55	-8.615850e-47
Msa1231490	Msa1371800	0.872125	4.043788e-67	-8.615850e-47
Msa1231490	Msa1372030	0.842479	2.521984e-58	-8.615850e-47
Msa1231490	Msa1376310	0.879387	1.298675e-69	-8.615850e-47
Msa1231490	Msa1377140	0.804755	1.855032e-49	-8.615850e-47
Msa1231490	Msa1385570	0.844903	5.666095e-59	-8.615850e-47
Msa1231490	Msa1395050	0.805538	1.271996e-49	-8.615850e-47
Msa1231490	Msa1398490	0.803635	3.173035e-49	-8.615850e-47
Msa1231490	Msa1420830	0.841052	6.003291e-58	-8.615850e-47
Msa1231490	Msa1434700	0.801468	8.875479e-49	-8.615850e-47
Msa1231490	Msa1438510	0.818919	1.524487e-52	-8.615850e-47
Msa1231490	Msa1447900	0.841313	5.124644e-58	-8.615850e-47
Msa1231490	Msa1453030	0.804978	1.666474e-49	-8.615850e-47
Msa1231490	Msa1460970	0.827874	1.229010e-54	-8.615850e-47
Msa0372100	Msa1231490	0.811891	5.578683e-51	-8.615850e-47
Msa0388250	Msa1231490	0.802069	6.682037e-49	-8.615850e-47
Msa0401060	Msa1231490	0.802726	4.893254e-49	-8.615850e-47
Msa0416210	Msa1231490	0.816697	4.838444e-52	-8.615850e-47
Msa0422820	Msa1231490	0.803595	3.234486e-49	-8.615850e-47
Msa0422900	Msa1231490	0.811202	7.877375e-51	-8.615850e-47
Msa0433630	Msa1231490	0.829665	4.533420e-55	-8.615850e-47
Msa0477480	Msa1231490	0.815900	7.292406e-52	-8.615850e-47
Msa1008850	Msa1231490	0.854033	1.610962e-61	-8.615850e-47
Msa1019180	Msa1231490	0.806148	9.469209e-50	-8.615850e-47
Msa1021560	Msa1231490	0.851527	8.373526e-61	-8.615850e-47
Msa1026710	Msa1231490	0.816426	5.565233e-52	-8.615850e-47
Msa1033420	Msa1231490	0.811106	8.262074e-51	-8.615850e-47
Msa1038860	Msa1231490	0.802942	4.414468e-49	-8.615850e-47
Msa1050260	Msa1231490	0.827276	1.710529e-54	-8.615850e-47
Msa1060300	Msa1231490	0.820055	8.394200e-53	-8.615850e-47
Msa1073060	Msa1231490	0.803736	3.023725e-49	-8.615850e-47
Msa1085560	Msa1231490	0.802860	4.590624e-49	-8.615850e-47
Msa1085680	Msa1231490	0.808272	3.360374e-50	-8.615850e-47
Msa1105540	Msa1231490	0.850827	1.319786e-60	-8.615850e-47
Msa1105580	Msa1231490	0.855758	5.089172e-62	-8.615850e-47
Msa0249870	Msa1231490	0.807233	5.587612e-50	-8.615850e-47
Msa0260980	Msa1231490	0.829129	6.118273e-55	-8.615850e-47
Msa0297200	Msa1231490	0.800857	1.183838e-48	-8.615850e-47
Msa0336430	Msa1231490	0.824250	8.938689e-54	-8.615850e-47
Msa0336460	Msa1231490	0.810131	1.342757e-50	-8.615850e-47
Msa0336520	Msa1231490	0.832330	1.005074e-55	-8.615850e-47
Msa1130770	Msa1231490	0.834021	3.812101e-56	-8.615850e-47
Msa1138800	Msa1231490	0.815889	7.334102e-52	-8.615850e-47
Msa1144990	Msa1231490	0.806499	7.984957e-50	-8.615850e-47
Msa1148930	Msa1231490	0.848098	7.607540e-60	-8.615850e-47
Msa1180840	Msa1231490	0.888519	5.494782e-73	-8.615850e-47
Msa1188340	Msa1231490	0.811251	7.686515e-51	-8.615850e-47
Msa1206040	Msa1231490	0.815151	1.070591e-51	-8.615850e-47
Msa0521510	Msa1231490	0.813245	2.822387e-51	-8.615850e-47
Msa0521530	Msa1231490	0.817539	3.128453e-52	-8.615850e-47
Msa0528310	Msa1231490	0.801115	1.048408e-48	-8.615850e-47
Msa0530660	Msa1231490	0.843717	1.179950e-58	-8.615850e-47
Msa0552570	Msa1231490	0.825557	4.393661e-54	-8.615850e-47
Msa0566460	Msa1231490	0.841902	3.584403e-58	-8.615850e-47
Msa0571350	Msa1231490	0.826056	3.344871e-54	-8.615850e-47
Msa0575950	Msa1231490	0.804356	2.246996e-49	-8.615850e-47
Msa0576330	Msa1231490	0.809915	1.494104e-50	-8.615850e-47
Msa0587180	Msa1231490	0.858006	1.107319e-62	-8.615850e-47
Msa0846900	Msa1231490	0.851696	7.501038e-61	-8.615850e-47
Msa0876630	Msa1231490	0.810710	1.006666e-50	-8.615850e-47
Msa0925330	Msa1231490	0.810693	1.015467e-50	-8.615850e-47
Msa0929900	Msa1231490	0.828450	8.931302e-55	-8.615850e-47
Msa0945900	Msa1231490	0.813490	2.493650e-51	-8.615850e-47
Msa0966120	Msa1231490	0.804921	1.712340e-49	-8.615850e-47
Msa0978980	Msa1231490	0.804164	2.463186e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1231490	MtrunA17_Chr8g0340401	97.681	345	5	1	1	345	1	342	0.0	702
Msa1231490	MtrunA17_Chr1g0146231	46.471	340	132	11	35	345	26	344	6.23e-83	255
Msa1231490	MtrunA17_Chr3g0140331	44.595	370	128	11	1	345	47	364	9.47e-80	248
Msa1231490	MtrunA17_Chr8g0372291	39.362	282	119	7	31	295	41	287	3.26e-48	164
Msa1231490	MtrunA17_Chr4g0035891	39.146	281	114	11	33	295	39	280	4.21e-43	150
Msa1231490	MtrunA17_Chr5g0404981	39.916	238	81	6	102	295	150	369	2.19e-40	146
Msa1231490	MtrunA17_Chr3g0145121	36.042	283	124	7	33	295	39	284	5.28e-40	142
Msa1231490	MtrunA17_Chr6g0461591	38.889	234	77	10	115	292	35	258	1.64e-35	130
Msa1231490	MtrunA17_Chr1g0169431	58.824	119	44	3	179	295	126	241	4.25e-35	128
Msa1231490	MtrunA17_Chr7g0253101	37.557	221	80	6	115	290	45	252	1.33e-33	125
Msa1231490	MtrunA17_Chr5g0395391	76.389	72	17	0	225	296	269	340	2.57e-33	126
Msa1231490	MtrunA17_Chr5g0395391	76.923	65	15	0	225	289	167	231	3.27e-29	115
Msa1231490	MtrunA17_Chr1g0199671	72.973	74	20	0	226	299	242	315	6.45e-33	124
Msa1231490	MtrunA17_Chr4g0028961	64.198	81	29	0	212	292	218	298	5.91e-30	116
Msa1231490	MtrunA17_Chr1g0213161	69.333	75	21	1	226	298	152	226	1.33e-29	113
Msa1231490	MtrunA17_Chr2g0326771	75.385	65	16	0	226	290	216	280	1.90e-29	115
Msa1231490	MtrunA17_Chr7g0232671	53.947	76	34	1	213	287	173	248	4.74e-21	90.9
Msa1231490	MtrunA17_Chr7g0232681	31.492	181	107	4	107	287	30	193	3.11e-19	84.3
Msa1231490	MtrunA17_Chr7g0232701	56.452	62	27	0	226	287	73	134	2.35e-18	80.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1231490	AT4G32890.1	47.561	328	122	13	33	345	16	308	6.36e-81	249
Msa1231490	AT5G25830.1	45.730	363	100	15	35	345	14	331	9.73e-73	229
Msa1231490	AT3G60530.1	48.792	207	58	8	101	298	63	230	1.13e-48	164
Msa1231490	AT2G45050.1	44.954	218	67	5	104	300	68	253	1.92e-48	164
Msa1231490	AT5G66320.2	41.277	235	79	6	102	294	100	317	1.39e-40	145
Msa1231490	AT5G66320.1	41.277	235	79	6	102	294	100	317	1.39e-40	145
Msa1231490	AT4G36240.1	39.114	271	103	9	35	293	11	231	4.17e-40	141
Msa1231490	AT4G34680.1	44.974	189	72	3	107	295	93	249	1.28e-39	141
Msa1231490	AT4G34680.2	44.974	189	72	3	107	295	93	249	1.28e-39	141
Msa1231490	AT1G08010.2	76.056	71	17	0	226	296	220	290	9.46e-34	126
Msa1231490	AT1G08010.1	76.056	71	17	0	226	296	220	290	9.46e-34	126
Msa1231490	AT1G08010.3	76.056	71	17	0	226	296	220	290	9.46e-34	126
Msa1231490	AT3G24050.1	77.941	68	15	0	225	292	193	260	1.86e-33	125
Msa1231490	AT3G54810.1	59.794	97	35	1	226	322	229	321	6.00e-33	125
Msa1231490	AT3G54810.2	59.794	97	35	1	226	322	229	321	6.00e-33	125
Msa1231490	AT3G51080.1	60.000	90	36	0	226	315	221	310	4.79e-31	119
Msa1231490	AT1G08000.2	74.627	67	17	0	226	292	218	284	1.28e-30	118
Msa1231490	AT1G08000.1	74.627	67	17	0	226	292	218	284	1.28e-30	118
Msa1231490	AT3G45170.1	47.917	96	50	0	218	313	107	202	1.72e-26	104
Msa1231490	AT2G28340.1	66.154	65	22	0	228	292	193	257	5.07e-25	103
Msa1231490	AT3G06740.1	31.373	102	45	2	226	312	41	132	4.07e-11	60.8

Find 93 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCTCACGTTTCTTCAAAAT+TGG	0.145607	8_2:+7624051	None:intergenic
GGAAGAGTCGGTGGAATTTC+CGG	0.199866	8_2:+7624616	None:intergenic
AGTGTAGCATAGTTTAATTT+AGG	0.264045	8_2:-7623635	Msa1231490:three_prime_UTR
TTTCCTGGTAGAGGTGTTTC+CGG	0.296778	8_2:+7624159	None:intergenic
GAATTCTCATAGGAAAGTTT+TGG	0.321671	8_2:-7623842	Msa1231490:CDS
GTGTAGCATAGTTTAATTTA+GGG	0.337935	8_2:-7623634	Msa1231490:three_prime_UTR
CGAATTTCGCGTTTACGAAA+TGG	0.338304	8_2:-7624813	Msa1231490:exon
GACGCTTCTCCGGCGAGAAT+TGG	0.338370	8_2:+7624744	None:intergenic
TTCCGGTGTTTGCGGTTTAA+CGG	0.362633	8_2:+7624254	None:intergenic
GTATGATGACATGGCGGAAC+TGG	0.373031	8_2:-7624358	Msa1231490:CDS
AGGCGCGTGGACCAGTCTCC+TGG	0.390187	8_2:+7624108	None:intergenic
CTTCCAGAACATTCCACATT+CGG	0.390638	8_2:+7624027	None:intergenic
GATCCGAATGTGGAATGTTC+TGG	0.407889	8_2:-7624030	Msa1231490:CDS
AAACGCTCACGCGCTGCTCC+AGG	0.438274	8_2:-7624126	Msa1231490:CDS
AGCTGTAACTCGTCTGGCTC+TGG	0.462242	8_2:-7624575	Msa1231490:CDS
ATCAATTATCATCATCATTG+TGG	0.463155	8_2:-7623691	Msa1231490:CDS
TACTTTGTCGGTGGCTACTA+CGG	0.465894	8_2:-7624779	Msa1231490:CDS
AAGACGCCGCAGTGGAGAAC+AGG	0.467796	8_2:-7623979	Msa1231490:CDS
AATTATGATGAGGGGATAAG+AGG	0.473337	8_2:-7623456	Msa1231490:three_prime_UTR
TGGTCACCGTGACGCTTCTC+CGG	0.476812	8_2:+7624734	None:intergenic
CGAAGCATTCGAATTCTCAT+AGG	0.477067	8_2:-7623852	Msa1231490:CDS
TCAATTATCATCATCATTGT+GGG	0.480828	8_2:-7623690	Msa1231490:CDS
TTGAGTGAAAGAGAGAATTG+AGG	0.481130	8_2:+7624877	None:intergenic
GAAGCACAAGATTACTTTGT+CGG	0.482794	8_2:-7624791	Msa1231490:CDS
CACCGGTGAACTCTGTGTTC+CGG	0.483064	8_2:-7624492	Msa1231490:intron
TAACGCTTCATTTCTCCGTC+CGG	0.485388	8_2:-7624178	Msa1231490:CDS
TCCGGTGATGTTCAACTCAC+CGG	0.487659	8_2:-7624509	Msa1231490:CDS
GTTGACAGCTGTAACTCGTC+TGG	0.493159	8_2:-7624581	Msa1231490:CDS
AAAACATTGCAACTTCTCTC+CGG	0.498282	8_2:-7624285	Msa1231490:CDS
GATGAAGATTCCGGTGTTTG+CGG	0.503689	8_2:+7624246	None:intergenic
GGAGGCACAATTGTTCCGTA+TGG	0.507701	8_2:-7624536	Msa1231490:CDS
TAAGTCCGGTAGGTTGGTGC+CGG	0.508279	8_2:-7623911	Msa1231490:CDS
TTGCAACTTCTCTCCGGCGC+CGG	0.510336	8_2:-7624279	Msa1231490:CDS
TCTGGTGGTGATAACCGCTT+TGG	0.512040	8_2:-7624557	Msa1231490:CDS
CAGTGGAGAACAGGACCAAT+GGG	0.512631	8_2:-7623970	Msa1231490:CDS
GGTGGTGATAACCGCTTTGG+AGG	0.525558	8_2:-7624554	Msa1231490:CDS
TGCTTCGCCGATACAAAAGT+TGG	0.526129	8_2:+7623868	None:intergenic
CTCGCCGCCGGTCGATACTC+CGG	0.528513	8_2:+7623892	None:intergenic
AAAATCAAGTAAATCATCAA+TGG	0.529566	8_2:+7624688	None:intergenic
TGTTTGCGGTTTAACGGCAC+CGG	0.530689	8_2:+7624260	None:intergenic
GTCGGTGGCTACTACGGTGC+CGG	0.534317	8_2:-7624773	Msa1231490:CDS
GGAATGGCTTTCGAATTTCG+TGG	0.546230	8_2:-7624337	Msa1231490:CDS
GTTGTTGTTGATGATGATGA+TGG	0.548424	8_2:+7623770	None:intergenic
ACCGGTGAGTTGAACATCAC+CGG	0.549777	8_2:+7624508	None:intergenic
ATAATGTAGAATTATGATGA+GGG	0.551811	8_2:-7623465	Msa1231490:three_prime_UTR
TCGGTGGAAGATGAAGATTC+CGG	0.552072	8_2:+7624237	None:intergenic
TTCTTCGATAACAATGTCGC+CGG	0.552150	8_2:-7624635	Msa1231490:CDS
ATACTCCGGCACCAACCTAC+CGG	0.552745	8_2:+7623906	None:intergenic
GAGGTTTAAGTCCGGTAGGT+TGG	0.552850	8_2:-7623917	Msa1231490:CDS
GCTGTCAACAGCGGTGACAT+TGG	0.554444	8_2:+7624595	None:intergenic
GCAGTGGAGAACAGGACCAA+TGG	0.555338	8_2:-7623971	Msa1231490:CDS
CTGGTAGAGGTGTTTCCGGA+CGG	0.556532	8_2:+7624163	None:intergenic
AGCGGTGACATTGGAAGAGT+CGG	0.570500	8_2:+7624604	None:intergenic
GATAATGTAGAATTATGATG+AGG	0.574310	8_2:-7623466	Msa1231490:three_prime_UTR
ACAAAAGTTGGACTCGCCGC+CGG	0.580278	8_2:+7623880	None:intergenic
ATGACATGGCGGAACTGGAA+TGG	0.581462	8_2:-7624353	Msa1231490:CDS
TGCCGTTAAACCGCAAACAC+CGG	0.582957	8_2:-7624256	Msa1231490:CDS
TACCGGAACACAGAGTTCAC+CGG	0.583290	8_2:+7624490	None:intergenic
TAAATTTGCCAAATTCAGCA+AGG	0.584504	8_2:+7623398	None:intergenic
GTTGGTGCCGGAGTATCGAC+CGG	0.600084	8_2:-7623899	Msa1231490:CDS
GTTTCGTCGGTGGAGAATGA+CGG	0.600088	8_2:+7624207	None:intergenic
GTTACGAGCGGTTTCGTCGG+TGG	0.601791	8_2:+7624197	None:intergenic
TAGATAGCATGTCTAAACTC+TGG	0.605527	8_2:+7623667	None:intergenic
TGTAACTCGTCTGGCTCTGG+TGG	0.609264	8_2:-7624572	Msa1231490:CDS
AGTAAATCATCAATGGCGAA+AGG	0.614239	8_2:+7624695	None:intergenic
TTCTCGCCGGAGAAGCGTCA+CGG	0.616797	8_2:-7624740	Msa1231490:CDS
TCAATGGCGAAAGGCTCACA+CGG	0.620341	8_2:+7624704	None:intergenic
AGCGTTACGAGCGGTTTCGT+CGG	0.625069	8_2:+7624194	None:intergenic
GGGGAGATGTAGTAGGCGCG+TGG	0.625946	8_2:+7624095	None:intergenic
CGGCGAAAACCAATTCTCGC+CGG	0.631060	8_2:-7624753	Msa1231490:CDS
GCACAAGATTACTTTGTCGG+TGG	0.638723	8_2:-7624788	Msa1231490:CDS
GAAACGTGAGGATCCGAATG+TGG	0.640873	8_2:-7624040	Msa1231490:CDS
TGTGGTGTGAGGTTTAAGTC+CGG	0.641447	8_2:-7623925	Msa1231490:CDS
GTGTGAGGTTTAAGTCCGGT+AGG	0.641902	8_2:-7623921	Msa1231490:CDS
ACCGTCAGACATAATCGCGT+CGG	0.646289	8_2:+7624658	None:intergenic
AATTTCATAGTATGATGACA+TGG	0.646855	8_2:-7624367	Msa1231490:intron
GAATGACGGAAGTGTGTCGG+TGG	0.649487	8_2:+7624221	None:intergenic
TCTGCAATGCGTGTGGTGTG+AGG	0.651426	8_2:-7623936	Msa1231490:CDS
AAAATGTCTCCACTGCGGCA+CGG	0.653917	8_2:-7624004	Msa1231490:CDS
TAATGTAGAATTATGATGAG+GGG	0.670081	8_2:-7623464	Msa1231490:three_prime_UTR
GGAGAATGACGGAAGTGTGT+CGG	0.671284	8_2:+7624218	None:intergenic
GGTGACATTGGAAGAGTCGG+TGG	0.674783	8_2:+7624607	None:intergenic
GAGAAATGAAGCGTTACGAG+CGG	0.684093	8_2:+7624185	None:intergenic
GCACGGATAAGACGCCGCAG+TGG	0.685559	8_2:-7623987	Msa1231490:CDS
AAAACACTCTGCAATGCGTG+TGG	0.694406	8_2:-7623943	Msa1231490:CDS
TTCGGCGTTTCATCTAACGG+TGG	0.696201	8_2:-7623724	Msa1231490:CDS
GGTGCCGGAGTATCGACCGG+CGG	0.709828	8_2:-7623896	Msa1231490:CDS
CGAGTTACAGCTGTCAACAG+CGG	0.715870	8_2:+7624586	None:intergenic
TTCATAGTATGATGACATGG+CGG	0.725133	8_2:-7624364	Msa1231490:intron
GAACAATTGTGCCTCCAAAG+CGG	0.730079	8_2:+7624543	None:intergenic
ATTGGTCCTGTTCTCCACTG+CGG	0.754224	8_2:+7623973	None:intergenic
ATGGCGAAAGGCTCACACGG+TGG	0.757233	8_2:+7624707	None:intergenic
GGAAGAAAATGTCTCCACTG+CGG	0.780752	8_2:-7624009	Msa1231490:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATCAAGTAAATCATCAA+TGG	+	chr8_2:7623605-7623624	None:intergenic	20.0%
!!	ACTTCAATTATCTTCAATTA+CGG	+	chr8_2:7623858-7623877	None:intergenic	20.0%
!!!	TTCAAAATTGGATAACTTTT+CGG	+	chr8_2:7624230-7624249	None:intergenic	20.0%
!!!	TTTTAAACTATTTTCTGCTT+TGG	-	chr8_2:7624716-7624735	Msa1231490:CDS	20.0%
!!	ATAATGTAGAATTATGATGA+GGG	-	chr8_2:7624825-7624844	Msa1231490:five_prime_UTR	20.0%
!!	AAAATCAAGTAAATCATCAA+TGG	+	chr8_2:7623605-7623624	None:intergenic	20.0%
!!	ACTTCAATTATCTTCAATTA+CGG	+	chr8_2:7623858-7623877	None:intergenic	20.0%
!!!	TTCAAAATTGGATAACTTTT+CGG	+	chr8_2:7624230-7624249	None:intergenic	20.0%
!!!	TTTTAAACTATTTTCTGCTT+TGG	-	chr8_2:7624716-7624735	Msa1231490:CDS	20.0%
!!	ATAATGTAGAATTATGATGA+GGG	-	chr8_2:7624825-7624844	Msa1231490:five_prime_UTR	20.0%
!	TTAGTGACATTATTACTTAC+CGG	+	chr8_2:7623820-7623839	None:intergenic	25.0%
!	AATTTCATAGTATGATGACA+TGG	-	chr8_2:7623923-7623942	Msa1231490:CDS	25.0%
!	ATCAATTATCATCATCATTG+TGG	-	chr8_2:7624599-7624618	Msa1231490:CDS	25.0%
!	TCAATTATCATCATCATTGT+GGG	-	chr8_2:7624600-7624619	Msa1231490:CDS	25.0%
!!	AGTGTAGCATAGTTTAATTT+AGG	-	chr8_2:7624655-7624674	Msa1231490:CDS	25.0%
!!	GTGTAGCATAGTTTAATTTA+GGG	-	chr8_2:7624656-7624675	Msa1231490:CDS	25.0%
!!!	ATTTGAGCTTTTTCCTTTAA+AGG	-	chr8_2:7624794-7624813	Msa1231490:CDS	25.0%
!!!	TTTGAGCTTTTTCCTTTAAA+GGG	-	chr8_2:7624795-7624814	Msa1231490:CDS	25.0%
!	GATAATGTAGAATTATGATG+AGG	-	chr8_2:7624824-7624843	Msa1231490:five_prime_UTR	25.0%
!	TAATGTAGAATTATGATGAG+GGG	-	chr8_2:7624826-7624845	Msa1231490:five_prime_UTR	25.0%
!!	ATTATTTTCCTTGCTGAATT+TGG	-	chr8_2:7624884-7624903	Msa1231490:five_prime_UTR	25.0%
!	TTAGTGACATTATTACTTAC+CGG	+	chr8_2:7623820-7623839	None:intergenic	25.0%
!	AATTTCATAGTATGATGACA+TGG	-	chr8_2:7623923-7623942	Msa1231490:CDS	25.0%
!	ATCAATTATCATCATCATTG+TGG	-	chr8_2:7624599-7624618	Msa1231490:CDS	25.0%
!	TCAATTATCATCATCATTGT+GGG	-	chr8_2:7624600-7624619	Msa1231490:CDS	25.0%
!!	AGTGTAGCATAGTTTAATTT+AGG	-	chr8_2:7624655-7624674	Msa1231490:CDS	25.0%
!!	GTGTAGCATAGTTTAATTTA+GGG	-	chr8_2:7624656-7624675	Msa1231490:CDS	25.0%
!!!	ATTTGAGCTTTTTCCTTTAA+AGG	-	chr8_2:7624794-7624813	Msa1231490:CDS	25.0%
!!!	TTTGAGCTTTTTCCTTTAAA+GGG	-	chr8_2:7624795-7624814	Msa1231490:CDS	25.0%
!	GATAATGTAGAATTATGATG+AGG	-	chr8_2:7624824-7624843	Msa1231490:five_prime_UTR	25.0%
!	TAATGTAGAATTATGATGAG+GGG	-	chr8_2:7624826-7624845	Msa1231490:five_prime_UTR	25.0%
!!	ATTATTTTCCTTGCTGAATT+TGG	-	chr8_2:7624884-7624903	Msa1231490:five_prime_UTR	25.0%
!	TGTTTTCAATTCTTCTTCAG+CGG	+	chr8_2:7623991-7624010	None:intergenic	30.0%
!	AAAATTGGATAACTTTTCGG+TGG	+	chr8_2:7624227-7624246	None:intergenic	30.0%
!	GAATTCTCATAGGAAAGTTT+TGG	-	chr8_2:7624448-7624467	Msa1231490:intron	30.0%
!!	TTGAGCTTTTTCCTTTAAAG+GGG	-	chr8_2:7624796-7624815	Msa1231490:CDS	30.0%
!	ATTATCTTTTCCCCCTTTAA+AGG	+	chr8_2:7624810-7624829	None:intergenic	30.0%
!	TGTTTTCAATTCTTCTTCAG+CGG	+	chr8_2:7623991-7624010	None:intergenic	30.0%
!	AAAATTGGATAACTTTTCGG+TGG	+	chr8_2:7624227-7624246	None:intergenic	30.0%
!	GAATTCTCATAGGAAAGTTT+TGG	-	chr8_2:7624448-7624467	Msa1231490:intron	30.0%
!!	TTGAGCTTTTTCCTTTAAAG+GGG	-	chr8_2:7624796-7624815	Msa1231490:CDS	30.0%
!	ATTATCTTTTCCCCCTTTAA+AGG	+	chr8_2:7624810-7624829	None:intergenic	30.0%
	TTGAGTGAAAGAGAGAATTG+AGG	+	chr8_2:7623416-7623435	None:intergenic	35.0%
	GAAGCACAAGATTACTTTGT+CGG	-	chr8_2:7623499-7623518	Msa1231490:three_prime_UTR	35.0%
	AGTAAATCATCAATGGCGAA+AGG	+	chr8_2:7623598-7623617	None:intergenic	35.0%
!	ATTGTTCCGTATGGTTTTTC+CGG	-	chr8_2:7623763-7623782	Msa1231490:CDS	35.0%
	TTCATAGTATGATGACATGG+CGG	-	chr8_2:7623926-7623945	Msa1231490:CDS	35.0%
	AAAACATTGCAACTTCTCTC+CGG	-	chr8_2:7624005-7624024	Msa1231490:CDS	35.0%
!!	TCCAATTTTGAAGAAACGTG+AGG	-	chr8_2:7624238-7624257	Msa1231490:CDS	35.0%
	TCCTCACGTTTCTTCAAAAT+TGG	+	chr8_2:7624242-7624261	None:intergenic	35.0%
!!	GTTGTTGTTGATGATGATGA+TGG	+	chr8_2:7624523-7624542	None:intergenic	35.0%
!	CTGAGTCACAGTTCAATTTT+CGG	-	chr8_2:7624548-7624567	Msa1231490:CDS	35.0%
!	ATTTTCGGCGTTTCATCTAA+CGG	-	chr8_2:7624563-7624582	Msa1231490:CDS	35.0%
	TAGATAGCATGTCTAAACTC+TGG	+	chr8_2:7624626-7624645	None:intergenic	35.0%
!!	TGAGCTTTTTCCTTTAAAGG+GGG	-	chr8_2:7624797-7624816	Msa1231490:CDS	35.0%
	AATTATGATGAGGGGATAAG+AGG	-	chr8_2:7624834-7624853	Msa1231490:five_prime_UTR	35.0%
	TTGAGTGAAAGAGAGAATTG+AGG	+	chr8_2:7623416-7623435	None:intergenic	35.0%
	GAAGCACAAGATTACTTTGT+CGG	-	chr8_2:7623499-7623518	Msa1231490:three_prime_UTR	35.0%
	AGTAAATCATCAATGGCGAA+AGG	+	chr8_2:7623598-7623617	None:intergenic	35.0%
!	ATTGTTCCGTATGGTTTTTC+CGG	-	chr8_2:7623763-7623782	Msa1231490:CDS	35.0%
	TTCATAGTATGATGACATGG+CGG	-	chr8_2:7623926-7623945	Msa1231490:CDS	35.0%
	AAAACATTGCAACTTCTCTC+CGG	-	chr8_2:7624005-7624024	Msa1231490:CDS	35.0%
!!	TCCAATTTTGAAGAAACGTG+AGG	-	chr8_2:7624238-7624257	Msa1231490:CDS	35.0%
	TCCTCACGTTTCTTCAAAAT+TGG	+	chr8_2:7624242-7624261	None:intergenic	35.0%
!!	GTTGTTGTTGATGATGATGA+TGG	+	chr8_2:7624523-7624542	None:intergenic	35.0%
!	CTGAGTCACAGTTCAATTTT+CGG	-	chr8_2:7624548-7624567	Msa1231490:CDS	35.0%
!	ATTTTCGGCGTTTCATCTAA+CGG	-	chr8_2:7624563-7624582	Msa1231490:CDS	35.0%
	TAGATAGCATGTCTAAACTC+TGG	+	chr8_2:7624626-7624645	None:intergenic	35.0%
!!	TGAGCTTTTTCCTTTAAAGG+GGG	-	chr8_2:7624797-7624816	Msa1231490:CDS	35.0%
	AATTATGATGAGGGGATAAG+AGG	-	chr8_2:7624834-7624853	Msa1231490:five_prime_UTR	35.0%
	CGAATTTCGCGTTTACGAAA+TGG	-	chr8_2:7623477-7623496	Msa1231490:three_prime_UTR	40.0%
	TTCTTCGATAACAATGTCGC+CGG	-	chr8_2:7623655-7623674	Msa1231490:exon	40.0%
	ACATCACCGGAAAAACCATA+CGG	+	chr8_2:7623772-7623791	None:intergenic	40.0%
	CTTCCAGAACATTCCACATT+CGG	+	chr8_2:7624266-7624285	None:intergenic	40.0%
!	CGAAGCATTCGAATTCTCAT+AGG	-	chr8_2:7624438-7624457	Msa1231490:intron	40.0%
	AGAGAGAATTGAGGAATGTG+TGG	+	chr8_2:7623407-7623426	None:intergenic	40.0%
	CGAATTTCGCGTTTACGAAA+TGG	-	chr8_2:7623477-7623496	Msa1231490:three_prime_UTR	40.0%
	TTCTTCGATAACAATGTCGC+CGG	-	chr8_2:7623655-7623674	Msa1231490:exon	40.0%
	ACATCACCGGAAAAACCATA+CGG	+	chr8_2:7623772-7623791	None:intergenic	40.0%
	CTTCCAGAACATTCCACATT+CGG	+	chr8_2:7624266-7624285	None:intergenic	40.0%
!	CGAAGCATTCGAATTCTCAT+AGG	-	chr8_2:7624438-7624457	Msa1231490:intron	40.0%
	GCACAAGATTACTTTGTCGG+TGG	-	chr8_2:7623502-7623521	Msa1231490:three_prime_UTR	45.0%
	TACTTTGTCGGTGGCTACTA+CGG	-	chr8_2:7623511-7623530	Msa1231490:three_prime_UTR	45.0%
	GAACAATTGTGCCTCCAAAG+CGG	+	chr8_2:7623750-7623769	None:intergenic	45.0%
	GGAATGGCTTTCGAATTTCG+TGG	-	chr8_2:7623953-7623972	Msa1231490:CDS	45.0%
	TTCCGGTGTTTGCGGTTTAA+CGG	+	chr8_2:7624039-7624058	None:intergenic	45.0%
	GATGAAGATTCCGGTGTTTG+CGG	+	chr8_2:7624047-7624066	None:intergenic	45.0%
	TCGGTGGAAGATGAAGATTC+CGG	+	chr8_2:7624056-7624075	None:intergenic	45.0%
!	GAGAAATGAAGCGTTACGAG+CGG	+	chr8_2:7624108-7624127	None:intergenic	45.0%
	TAACGCTTCATTTCTCCGTC+CGG	-	chr8_2:7624112-7624131	Msa1231490:CDS	45.0%
!!	TTTCCTGGTAGAGGTGTTTC+CGG	+	chr8_2:7624134-7624153	None:intergenic	45.0%
	GATCCGAATGTGGAATGTTC+TGG	-	chr8_2:7624260-7624279	Msa1231490:CDS	45.0%
	GGAAGAAAATGTCTCCACTG+CGG	-	chr8_2:7624281-7624300	Msa1231490:CDS	45.0%
!!	CACGCATTGCAGAGTGTTTT+CGG	+	chr8_2:7624347-7624366	None:intergenic	45.0%
	AAAACACTCTGCAATGCGTG+TGG	-	chr8_2:7624347-7624366	Msa1231490:CDS	45.0%
	TGTGGTGTGAGGTTTAAGTC+CGG	-	chr8_2:7624365-7624384	Msa1231490:intron	45.0%
!	GGCGAGTCCAACTTTTGTAT+CGG	-	chr8_2:7624415-7624434	Msa1231490:intron	45.0%
	TGCTTCGCCGATACAAAAGT+TGG	+	chr8_2:7624425-7624444	None:intergenic	45.0%
	GCACAAGATTACTTTGTCGG+TGG	-	chr8_2:7623502-7623521	Msa1231490:three_prime_UTR	45.0%
	TACTTTGTCGGTGGCTACTA+CGG	-	chr8_2:7623511-7623530	Msa1231490:three_prime_UTR	45.0%
	GAACAATTGTGCCTCCAAAG+CGG	+	chr8_2:7623750-7623769	None:intergenic	45.0%
	GGAATGGCTTTCGAATTTCG+TGG	-	chr8_2:7623953-7623972	Msa1231490:CDS	45.0%
	TTCCGGTGTTTGCGGTTTAA+CGG	+	chr8_2:7624039-7624058	None:intergenic	45.0%
	GATGAAGATTCCGGTGTTTG+CGG	+	chr8_2:7624047-7624066	None:intergenic	45.0%
	TCGGTGGAAGATGAAGATTC+CGG	+	chr8_2:7624056-7624075	None:intergenic	45.0%
!	GAGAAATGAAGCGTTACGAG+CGG	+	chr8_2:7624108-7624127	None:intergenic	45.0%
	TAACGCTTCATTTCTCCGTC+CGG	-	chr8_2:7624112-7624131	Msa1231490:CDS	45.0%
!!	TTTCCTGGTAGAGGTGTTTC+CGG	+	chr8_2:7624134-7624153	None:intergenic	45.0%
	GATCCGAATGTGGAATGTTC+TGG	-	chr8_2:7624260-7624279	Msa1231490:CDS	45.0%
	GGAAGAAAATGTCTCCACTG+CGG	-	chr8_2:7624281-7624300	Msa1231490:CDS	45.0%
!!	CACGCATTGCAGAGTGTTTT+CGG	+	chr8_2:7624347-7624366	None:intergenic	45.0%
	AAAACACTCTGCAATGCGTG+TGG	-	chr8_2:7624347-7624366	Msa1231490:CDS	45.0%
	TGTGGTGTGAGGTTTAAGTC+CGG	-	chr8_2:7624365-7624384	Msa1231490:intron	45.0%
!	GGCGAGTCCAACTTTTGTAT+CGG	-	chr8_2:7624415-7624434	Msa1231490:intron	45.0%
	TGCTTCGCCGATACAAAAGT+TGG	+	chr8_2:7624425-7624444	None:intergenic	45.0%
!	AAGGCTCACACGGTGGTTTT+TGG	+	chr8_2:7623579-7623598	None:intergenic	50.0%
	TCAATGGCGAAAGGCTCACA+CGG	+	chr8_2:7623589-7623608	None:intergenic	50.0%
	ACCGTCAGACATAATCGCGT+CGG	+	chr8_2:7623635-7623654	None:intergenic	50.0%
	GGAAGAGTCGGTGGAATTTC+CGG	+	chr8_2:7623677-7623696	None:intergenic	50.0%
	AGCGGTGACATTGGAAGAGT+CGG	+	chr8_2:7623689-7623708	None:intergenic	50.0%
	CGAGTTACAGCTGTCAACAG+CGG	+	chr8_2:7623707-7623726	None:intergenic	50.0%
	GTTGACAGCTGTAACTCGTC+TGG	-	chr8_2:7623709-7623728	Msa1231490:CDS	50.0%
!	TCTGGTGGTGATAACCGCTT+TGG	-	chr8_2:7623733-7623752	Msa1231490:CDS	50.0%
!	GGAGGCACAATTGTTCCGTA+TGG	-	chr8_2:7623754-7623773	Msa1231490:CDS	50.0%
	TCCGGTGATGTTCAACTCAC+CGG	-	chr8_2:7623781-7623800	Msa1231490:CDS	50.0%
!	ACCGGTGAGTTGAACATCAC+CGG	+	chr8_2:7623785-7623804	None:intergenic	50.0%
	TACCGGAACACAGAGTTCAC+CGG	+	chr8_2:7623803-7623822	None:intergenic	50.0%
!	GTATGATGACATGGCGGAAC+TGG	-	chr8_2:7623932-7623951	Msa1231490:CDS	50.0%
!	ATGACATGGCGGAACTGGAA+TGG	-	chr8_2:7623937-7623956	Msa1231490:CDS	50.0%
	TGTTTGCGGTTTAACGGCAC+CGG	+	chr8_2:7624033-7624052	None:intergenic	50.0%
	TGCCGTTAAACCGCAAACAC+CGG	-	chr8_2:7624034-7624053	Msa1231490:CDS	50.0%
!	GGAGAATGACGGAAGTGTGT+CGG	+	chr8_2:7624075-7624094	None:intergenic	50.0%
	GTTTCGTCGGTGGAGAATGA+CGG	+	chr8_2:7624086-7624105	None:intergenic	50.0%
!	CTACGTGCTTTTCCTGGTAG+AGG	+	chr8_2:7624143-7624162	None:intergenic	50.0%
!!	CGTTTGCTACGTGCTTTTCC+TGG	+	chr8_2:7624149-7624168	None:intergenic	50.0%
!	ATAACTTTTCGGTGGCGCGT+CGG	+	chr8_2:7624219-7624238	None:intergenic	50.0%
	GAAACGTGAGGATCCGAATG+TGG	-	chr8_2:7624250-7624269	Msa1231490:CDS	50.0%
	AAAATGTCTCCACTGCGGCA+CGG	-	chr8_2:7624286-7624305	Msa1231490:CDS	50.0%
	ATTGGTCCTGTTCTCCACTG+CGG	+	chr8_2:7624320-7624339	None:intergenic	50.0%
	CAGTGGAGAACAGGACCAAT+GGG	-	chr8_2:7624320-7624339	Msa1231490:CDS	50.0%
!!	CAGAGTGTTTTCGGTCCCAT+TGG	+	chr8_2:7624338-7624357	None:intergenic	50.0%
	GTGTGAGGTTTAAGTCCGGT+AGG	-	chr8_2:7624369-7624388	Msa1231490:intron	50.0%
	GAGGTTTAAGTCCGGTAGGT+TGG	-	chr8_2:7624373-7624392	Msa1231490:intron	50.0%
	TTCGGCGTTTCATCTAACGG+TGG	-	chr8_2:7624566-7624585	Msa1231490:CDS	50.0%
!	AAGGCTCACACGGTGGTTTT+TGG	+	chr8_2:7623579-7623598	None:intergenic	50.0%
	TCAATGGCGAAAGGCTCACA+CGG	+	chr8_2:7623589-7623608	None:intergenic	50.0%
	ACCGTCAGACATAATCGCGT+CGG	+	chr8_2:7623635-7623654	None:intergenic	50.0%
	GGAAGAGTCGGTGGAATTTC+CGG	+	chr8_2:7623677-7623696	None:intergenic	50.0%
	AGCGGTGACATTGGAAGAGT+CGG	+	chr8_2:7623689-7623708	None:intergenic	50.0%
	CGAGTTACAGCTGTCAACAG+CGG	+	chr8_2:7623707-7623726	None:intergenic	50.0%
	GTTGACAGCTGTAACTCGTC+TGG	-	chr8_2:7623709-7623728	Msa1231490:CDS	50.0%
!	TCTGGTGGTGATAACCGCTT+TGG	-	chr8_2:7623733-7623752	Msa1231490:CDS	50.0%
!	GGAGGCACAATTGTTCCGTA+TGG	-	chr8_2:7623754-7623773	Msa1231490:CDS	50.0%
	TCCGGTGATGTTCAACTCAC+CGG	-	chr8_2:7623781-7623800	Msa1231490:CDS	50.0%
!	ACCGGTGAGTTGAACATCAC+CGG	+	chr8_2:7623785-7623804	None:intergenic	50.0%
	TACCGGAACACAGAGTTCAC+CGG	+	chr8_2:7623803-7623822	None:intergenic	50.0%
!	GTATGATGACATGGCGGAAC+TGG	-	chr8_2:7623932-7623951	Msa1231490:CDS	50.0%
!	ATGACATGGCGGAACTGGAA+TGG	-	chr8_2:7623937-7623956	Msa1231490:CDS	50.0%
	TGTTTGCGGTTTAACGGCAC+CGG	+	chr8_2:7624033-7624052	None:intergenic	50.0%
	TGCCGTTAAACCGCAAACAC+CGG	-	chr8_2:7624034-7624053	Msa1231490:CDS	50.0%
!	GGAGAATGACGGAAGTGTGT+CGG	+	chr8_2:7624075-7624094	None:intergenic	50.0%
	GTTTCGTCGGTGGAGAATGA+CGG	+	chr8_2:7624086-7624105	None:intergenic	50.0%
!	CTACGTGCTTTTCCTGGTAG+AGG	+	chr8_2:7624143-7624162	None:intergenic	50.0%
!!	CGTTTGCTACGTGCTTTTCC+TGG	+	chr8_2:7624149-7624168	None:intergenic	50.0%
!	ATAACTTTTCGGTGGCGCGT+CGG	+	chr8_2:7624219-7624238	None:intergenic	50.0%
	GAAACGTGAGGATCCGAATG+TGG	-	chr8_2:7624250-7624269	Msa1231490:CDS	50.0%
	AAAATGTCTCCACTGCGGCA+CGG	-	chr8_2:7624286-7624305	Msa1231490:CDS	50.0%
	ATTGGTCCTGTTCTCCACTG+CGG	+	chr8_2:7624320-7624339	None:intergenic	50.0%
	CAGTGGAGAACAGGACCAAT+GGG	-	chr8_2:7624320-7624339	Msa1231490:CDS	50.0%
!!	CAGAGTGTTTTCGGTCCCAT+TGG	+	chr8_2:7624338-7624357	None:intergenic	50.0%
	GTGTGAGGTTTAAGTCCGGT+AGG	-	chr8_2:7624369-7624388	Msa1231490:intron	50.0%
	GAGGTTTAAGTCCGGTAGGT+TGG	-	chr8_2:7624373-7624392	Msa1231490:intron	50.0%
	TTCGGCGTTTCATCTAACGG+TGG	-	chr8_2:7624566-7624585	Msa1231490:CDS	50.0%
!!!	CGGCGAGAATTGGTTTTCGC+CGG	+	chr8_2:7623539-7623558	None:intergenic	55.0%
	CGGCGAAAACCAATTCTCGC+CGG	-	chr8_2:7623537-7623556	Msa1231490:three_prime_UTR	55.0%
	GCCGACGCGATTATGTCTGA+CGG	-	chr8_2:7623631-7623650	Msa1231490:three_prime_UTR	55.0%
	GGTGACATTGGAAGAGTCGG+TGG	+	chr8_2:7623686-7623705	None:intergenic	55.0%
	GCTGTCAACAGCGGTGACAT+TGG	+	chr8_2:7623698-7623717	None:intergenic	55.0%
!	AGCTGTAACTCGTCTGGCTC+TGG	-	chr8_2:7623715-7623734	Msa1231490:CDS	55.0%
!!	TGTAACTCGTCTGGCTCTGG+TGG	-	chr8_2:7623718-7623737	Msa1231490:CDS	55.0%
	GGTGGTGATAACCGCTTTGG+AGG	-	chr8_2:7623736-7623755	Msa1231490:CDS	55.0%
	CACCGGTGAACTCTGTGTTC+CGG	-	chr8_2:7623798-7623817	Msa1231490:CDS	55.0%
!	GAATGACGGAAGTGTGTCGG+TGG	+	chr8_2:7624072-7624091	None:intergenic	55.0%
	AGCGTTACGAGCGGTTTCGT+CGG	+	chr8_2:7624099-7624118	None:intergenic	55.0%
!!	CTGGTAGAGGTGTTTCCGGA+CGG	+	chr8_2:7624130-7624149	None:intergenic	55.0%
!	TAACTTTTCGGTGGCGCGTC+GGG	+	chr8_2:7624218-7624237	None:intergenic	55.0%
	GCAGTGGAGAACAGGACCAA+TGG	-	chr8_2:7624319-7624338	Msa1231490:CDS	55.0%
	TCTGCAATGCGTGTGGTGTG+AGG	-	chr8_2:7624354-7624373	Msa1231490:CDS	55.0%
!!	TAAGTCCGGTAGGTTGGTGC+CGG	-	chr8_2:7624379-7624398	Msa1231490:intron	55.0%
	ATACTCCGGCACCAACCTAC+CGG	+	chr8_2:7624387-7624406	None:intergenic	55.0%
	ACAAAAGTTGGACTCGCCGC+CGG	+	chr8_2:7624413-7624432	None:intergenic	55.0%
!!!	CGGCGAGAATTGGTTTTCGC+CGG	+	chr8_2:7623539-7623558	None:intergenic	55.0%
	CGGCGAAAACCAATTCTCGC+CGG	-	chr8_2:7623537-7623556	Msa1231490:three_prime_UTR	55.0%
	GCCGACGCGATTATGTCTGA+CGG	-	chr8_2:7623631-7623650	Msa1231490:three_prime_UTR	55.0%
	GGTGACATTGGAAGAGTCGG+TGG	+	chr8_2:7623686-7623705	None:intergenic	55.0%
	GCTGTCAACAGCGGTGACAT+TGG	+	chr8_2:7623698-7623717	None:intergenic	55.0%
!	AGCTGTAACTCGTCTGGCTC+TGG	-	chr8_2:7623715-7623734	Msa1231490:CDS	55.0%
!!	TGTAACTCGTCTGGCTCTGG+TGG	-	chr8_2:7623718-7623737	Msa1231490:CDS	55.0%
	GGTGGTGATAACCGCTTTGG+AGG	-	chr8_2:7623736-7623755	Msa1231490:CDS	55.0%
	CACCGGTGAACTCTGTGTTC+CGG	-	chr8_2:7623798-7623817	Msa1231490:CDS	55.0%
!	GAATGACGGAAGTGTGTCGG+TGG	+	chr8_2:7624072-7624091	None:intergenic	55.0%
	AGCGTTACGAGCGGTTTCGT+CGG	+	chr8_2:7624099-7624118	None:intergenic	55.0%
!!	CTGGTAGAGGTGTTTCCGGA+CGG	+	chr8_2:7624130-7624149	None:intergenic	55.0%
!	TAACTTTTCGGTGGCGCGTC+GGG	+	chr8_2:7624218-7624237	None:intergenic	55.0%
	GCAGTGGAGAACAGGACCAA+TGG	-	chr8_2:7624319-7624338	Msa1231490:CDS	55.0%
	TCTGCAATGCGTGTGGTGTG+AGG	-	chr8_2:7624354-7624373	Msa1231490:CDS	55.0%
!!	TAAGTCCGGTAGGTTGGTGC+CGG	-	chr8_2:7624379-7624398	Msa1231490:intron	55.0%
	ATACTCCGGCACCAACCTAC+CGG	+	chr8_2:7624387-7624406	None:intergenic	55.0%
	ACAAAAGTTGGACTCGCCGC+CGG	+	chr8_2:7624413-7624432	None:intergenic	55.0%
	GACGCTTCTCCGGCGAGAAT+TGG	+	chr8_2:7623549-7623568	None:intergenic	60.0%
!!	TTCTCGCCGGAGAAGCGTCA+CGG	-	chr8_2:7623550-7623569	Msa1231490:three_prime_UTR	60.0%
	TGGTCACCGTGACGCTTCTC+CGG	+	chr8_2:7623559-7623578	None:intergenic	60.0%
	ATGGCGAAAGGCTCACACGG+TGG	+	chr8_2:7623586-7623605	None:intergenic	60.0%
	TTGCAACTTCTCTCCGGCGC+CGG	-	chr8_2:7624011-7624030	Msa1231490:CDS	60.0%
	GTTACGAGCGGTTTCGTCGG+TGG	+	chr8_2:7624096-7624115	None:intergenic	60.0%
	CGTCCGGAAACACCTCTACC+AGG	-	chr8_2:7624128-7624147	Msa1231490:CDS	60.0%
!	AACTTTTCGGTGGCGCGTCG+GGG	+	chr8_2:7624217-7624236	None:intergenic	60.0%
	AAGACGCCGCAGTGGAGAAC+AGG	-	chr8_2:7624311-7624330	Msa1231490:CDS	60.0%
!!	GTTGGTGCCGGAGTATCGAC+CGG	-	chr8_2:7624391-7624410	Msa1231490:intron	60.0%
	GACGCTTCTCCGGCGAGAAT+TGG	+	chr8_2:7623549-7623568	None:intergenic	60.0%
!!	TTCTCGCCGGAGAAGCGTCA+CGG	-	chr8_2:7623550-7623569	Msa1231490:three_prime_UTR	60.0%
	TGGTCACCGTGACGCTTCTC+CGG	+	chr8_2:7623559-7623578	None:intergenic	60.0%
	ATGGCGAAAGGCTCACACGG+TGG	+	chr8_2:7623586-7623605	None:intergenic	60.0%
	TTGCAACTTCTCTCCGGCGC+CGG	-	chr8_2:7624011-7624030	Msa1231490:CDS	60.0%
	GTTACGAGCGGTTTCGTCGG+TGG	+	chr8_2:7624096-7624115	None:intergenic	60.0%
	CGTCCGGAAACACCTCTACC+AGG	-	chr8_2:7624128-7624147	Msa1231490:CDS	60.0%
!	AACTTTTCGGTGGCGCGTCG+GGG	+	chr8_2:7624217-7624236	None:intergenic	60.0%
	AAGACGCCGCAGTGGAGAAC+AGG	-	chr8_2:7624311-7624330	Msa1231490:CDS	60.0%
!!	GTTGGTGCCGGAGTATCGAC+CGG	-	chr8_2:7624391-7624410	Msa1231490:intron	60.0%
	GTCGGTGGCTACTACGGTGC+CGG	-	chr8_2:7623517-7623536	Msa1231490:three_prime_UTR	65.0%
	AAACGCTCACGCGCTGCTCC+AGG	-	chr8_2:7624164-7624183	Msa1231490:CDS	65.0%
	GGGGAGATGTAGTAGGCGCG+TGG	+	chr8_2:7624198-7624217	None:intergenic	65.0%
	GCGCGTCGGGGAGATGTAGT+AGG	+	chr8_2:7624205-7624224	None:intergenic	65.0%
	GCGTCTTATCCGTGCCGCAG+TGG	+	chr8_2:7624298-7624317	None:intergenic	65.0%
	GCACGGATAAGACGCCGCAG+TGG	-	chr8_2:7624303-7624322	Msa1231490:CDS	65.0%
	GTCGGTGGCTACTACGGTGC+CGG	-	chr8_2:7623517-7623536	Msa1231490:three_prime_UTR	65.0%
	AAACGCTCACGCGCTGCTCC+AGG	-	chr8_2:7624164-7624183	Msa1231490:CDS	65.0%
	GGGGAGATGTAGTAGGCGCG+TGG	+	chr8_2:7624198-7624217	None:intergenic	65.0%
	GCGCGTCGGGGAGATGTAGT+AGG	+	chr8_2:7624205-7624224	None:intergenic	65.0%
	GCGTCTTATCCGTGCCGCAG+TGG	+	chr8_2:7624298-7624317	None:intergenic	65.0%
	GCACGGATAAGACGCCGCAG+TGG	-	chr8_2:7624303-7624322	Msa1231490:CDS	65.0%
!!	CGGTTTAACGGCACCGGCGC+CGG	+	chr8_2:7624027-7624046	None:intergenic	70.0%
	CACGCGCTGCTCCAGGAGAC+TGG	-	chr8_2:7624171-7624190	Msa1231490:CDS	70.0%
	AGGCGCGTGGACCAGTCTCC+TGG	+	chr8_2:7624185-7624204	None:intergenic	70.0%
!!	GGTGCCGGAGTATCGACCGG+CGG	-	chr8_2:7624394-7624413	Msa1231490:intron	70.0%
	CTCGCCGCCGGTCGATACTC+CGG	+	chr8_2:7624401-7624420	None:intergenic	70.0%
!!	CGGTTTAACGGCACCGGCGC+CGG	+	chr8_2:7624027-7624046	None:intergenic	70.0%
	CACGCGCTGCTCCAGGAGAC+TGG	-	chr8_2:7624171-7624190	Msa1231490:CDS	70.0%
	AGGCGCGTGGACCAGTCTCC+TGG	+	chr8_2:7624185-7624204	None:intergenic	70.0%
!!	GGTGCCGGAGTATCGACCGG+CGG	-	chr8_2:7624394-7624413	Msa1231490:intron	70.0%
	CTCGCCGCCGGTCGATACTC+CGG	+	chr8_2:7624401-7624420	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_2	gene	7623405	7624907	7623405	ID=Msa1231490;Name=Msa1231490
chr8_2	mRNA	7623405	7624907	7623405	ID=Msa1231490-mRNA-1;Parent=Msa1231490;Name=Msa1231490-mRNA-1;_AED=0.00;_eAED=0.00;_QI=91\|1\|1\|1\|1\|1\|2\|261\|345
chr8_2	exon	7623405	7624379	7623405	ID=Msa1231490-mRNA-1:exon:2865;Parent=Msa1231490-mRNA-1
chr8_2	exon	7624493	7624907	7624493	ID=Msa1231490-mRNA-1:exon:2864;Parent=Msa1231490-mRNA-1
chr8_2	five_prime_UTR	7624817	7624907	7624817	ID=Msa1231490-mRNA-1:five_prime_utr;Parent=Msa1231490-mRNA-1
chr8_2	CDS	7624493	7624816	7624493	ID=Msa1231490-mRNA-1:cds;Parent=Msa1231490-mRNA-1
chr8_2	CDS	7623666	7624379	7623666	ID=Msa1231490-mRNA-1:cds;Parent=Msa1231490-mRNA-1
chr8_2	three_prime_UTR	7623405	7623665	7623405	ID=Msa1231490-mRNA-1:three_prime_utr;Parent=Msa1231490-mRNA-1

Gene Sequence

>Msa1231490

ATGGAAGCACAAGATTACTTTGTCGGTGGCTACTACGGTGCCGGCGAAAACCAATTCTCGCCGGAGAAGCGTCACGGTGACCAAAAACCACCGTGTGAGCCTTTCGCCATTGATGATTTACTTGATTTTTCAAATGCCGACGCGATTATGTCTGACGGTTTCTTCGATAACAATGTCGCCGGAAATTCCACCGACTCTTCCAATGTCACCGCTGTTGACAGCTGTAACTCGTCTGGCTCTGGTGGTGATAACCGCTTTGGAGGCACAATTGTTCCGTATGGTTTTTCCGGTGATGTTCAACTCACCGGTGAACTCTGTGTTCCGTATGATGACATGGCGGAACTGGAATGGCTTTCGAATTTCGTGGAAGATTCATACTCCGCTGAAGAAGAATTGAAAACATTGCAACTTCTCTCCGGCGCCGGTGCCGTTAAACCGCAAACACCGGAATCTTCATCTTCCACCGACACACTTCCGTCATTCTCCACCGACGAAACCGCTCGTAACGCTTCATTTCTCCGTCCGGAAACACCTCTACCAGGAAAAGCACGTAGCAAACGCTCACGCGCTGCTCCAGGAGACTGGTCCACGCGCCTACTACATCTCCCCGACGCGCCACCGAAAAGTTATCCAATTTTGAAGAAACGTGAGGATCCGAATGTGGAATGTTCTGGAAGAAAATGTCTCCACTGCGGCACGGATAAGACGCCGCAGTGGAGAACAGGACCAATGGGACCGAAAACACTCTGCAATGCGTGTGGTGTGAGGTTTAAGTCCGGTAGGTTGGTGCCGGAGTATCGACCGGCGGCGAGTCCAACTTTTGTATCGGCGAAGCATTCGAATTCTCATAGGAAAGTTTTGGAACTTCGAAGACAGAAAGAGATGCAAAGATCATCACAGCATCATCATCACCATCATCATCATCAACAACAACAGCTTCTGAGTCACAGTTCAATTTTCGGCGTTTCATCTAACGGTGGAGATGATTTCATCAATTATCATCATCATTGTGGGCCAGAGTTTAGACATGCTATCTAG

Protein sequence

>Msa1231490

MEAQDYFVGGYYGAGENQFSPEKRHGDQKPPCEPFAIDDLLDFSNADAIMSDGFFDNNVAGNSTDSSNVTAVDSCNSSGSGGDNRFGGTIVPYGFSGDVQLTGELCVPYDDMAELEWLSNFVEDSYSAEEELKTLQLLSGAGAVKPQTPESSSSTDTLPSFSTDETARNASFLRPETPLPGKARSKRSRAAPGDWSTRLLHLPDAPPKSYPILKKREDPNVECSGRKCLHCGTDKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSAKHSNSHRKVLELRRQKEMQRSSQHHHHHHHHQQQQLLSHSSIFGVSSNGGDDFINYHHHCGPEFRHAI*