AlfalfaGEDB | Msa1028100

M. sativa cultivar zhongmu-4 / Msa1028100

KEGG: -
GO: GO:0002376 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0009505 GO:0009531 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009664 GO:0009814 GO:0009817 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016020 GO:0016043 GO:0016049 GO:0017016 GO:0017048 GO:0019899 GO:0021700 GO:0022622 GO:0030154 GO:0030312 GO:0031267 GO:0032501 GO:0032502 GO:0040007 GO:0043207 GO:0044424 GO:0044464 GO:0045087 GO:0045229 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051020 GO:0051704 GO:0051707 GO:0060560 GO:0065007 GO:0065009 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0098542 GO:0098772 GO:0099402 GO:1905392
PFAM: PF03759.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1028100	XP_003623962.2	95.379	541	16	1	1	541	1	532	0.0	1056

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1028100	sp\|A4IJ27\|ROGF3_ARATH	54.113	547	170	13	1	540	1	473	0.0	522

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1028100	G7L4N2	95.379	541	16	1	1	541	1	532	0.0	1056

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0002580	Msa1028100	0.810606	1.060508e-50	-8.615850e-47
Msa0005890	Msa1028100	0.834894	2.301829e-56	-8.615850e-47
Msa0021500	Msa1028100	0.803119	4.058468e-49	-8.615850e-47
Msa0034810	Msa1028100	0.818557	1.842070e-52	-8.615850e-47
Msa0036870	Msa1028100	0.801330	9.472311e-49	-8.615850e-47
Msa0054690	Msa1028100	0.833912	4.061244e-56	-8.615850e-47
Msa0071860	Msa1028100	0.813318	2.719336e-51	-8.615850e-47
Msa0640200	Msa1028100	0.800062	1.718565e-48	-8.615850e-47
Msa0661150	Msa1028100	0.822750	2.004535e-53	-8.615850e-47
Msa0697160	Msa1028100	0.808845	2.535391e-50	-8.615850e-47
Msa0704410	Msa1028100	0.809202	2.126111e-50	-8.615850e-47
Msa0735780	Msa1028100	0.804958	1.682159e-49	-8.615850e-47
Msa0741220	Msa1028100	0.808892	2.476885e-50	-8.615850e-47
Msa0761670	Msa1028100	0.807090	5.991134e-50	-8.615850e-47
Msa0768990	Msa1028100	0.801769	7.702833e-49	-8.615850e-47
Msa0795870	Msa1028100	0.852039	5.993358e-61	-8.615850e-47
Msa0824450	Msa1028100	0.829119	6.153756e-55	-8.615850e-47
Msa0833650	Msa1028100	0.856387	3.330846e-62	-8.615850e-47
Msa0146040	Msa1028100	0.802222	6.215064e-49	-8.615850e-47
Msa0175730	Msa1028100	0.803892	2.805727e-49	-8.615850e-47
Msa0190570	Msa1028100	0.826313	2.904809e-54	-8.615850e-47
Msa0225100	Msa1028100	0.804370	2.231334e-49	-8.615850e-47
Msa0225860	Msa1028100	0.830479	2.870059e-55	-8.615850e-47
Msa0371170	Msa1028100	0.834951	2.226534e-56	-8.615850e-47
Msa0405680	Msa1028100	0.822644	2.121442e-53	-8.615850e-47
Msa0430300	Msa1028100	0.814313	1.641950e-51	-8.615850e-47
Msa0436910	Msa1028100	0.806627	7.505882e-50	-8.615850e-47
Msa0472950	Msa1028100	0.805814	1.113173e-49	-8.615850e-47
Msa1019430	Msa1028100	0.810495	1.120272e-50	-8.615850e-47
Msa1019470	Msa1028100	0.818653	1.752053e-52	-8.615850e-47
Msa1028100	Msa1045140	0.800469	1.420288e-48	-8.615850e-47
Msa1028100	Msa1103990	0.819880	9.205000e-53	-8.615850e-47
Msa1028100	Msa1117920	0.810837	9.449963e-51	-8.615850e-47
Msa1028100	Msa1132840	0.848452	6.076052e-60	-8.615850e-47
Msa1028100	Msa1155830	0.834949	2.229013e-56	-8.615850e-47
Msa1028100	Msa1161680	0.823197	1.576460e-53	-8.615850e-47
Msa1028100	Msa1208950	0.803966	2.708617e-49	-8.615850e-47
Msa1028100	Msa1215870	0.802962	4.374448e-49	-8.615850e-47
Msa1028100	Msa1226520	0.804860	1.763450e-49	-8.615850e-47
Msa1028100	Msa1265650	0.813702	2.239347e-51	-8.615850e-47
Msa1028100	Msa1303560	0.800897	1.161680e-48	-8.615850e-47
Msa1028100	Msa1303650	0.807352	5.270429e-50	-8.615850e-47
Msa1028100	Msa1343180	0.833689	4.615259e-56	-8.615850e-47
Msa1028100	Msa1359690	0.811562	6.579261e-51	-8.615850e-47
Msa1028100	Msa1393280	0.826867	2.143656e-54	-8.615850e-47
Msa1028100	Msa1396030	0.804127	2.507609e-49	-8.615850e-47
Msa1028100	Msa1437930	0.806789	6.935662e-50	-8.615850e-47
Msa1028100	Msa1440880	0.815367	9.587240e-52	-8.615850e-47
Msa1028100	Msa1465440	0.802799	4.727046e-49	-8.615850e-47
Msa0271880	Msa1028100	0.801444	8.980076e-49	-8.615850e-47
Msa0287740	Msa1028100	0.820697	5.981506e-53	-8.615850e-47
Msa0298470	Msa1028100	0.821257	4.445751e-53	-8.615850e-47
Msa0310850	Msa1028100	0.806694	7.265169e-50	-8.615850e-47
Msa0340500	Msa1028100	0.805986	1.024195e-49	-8.615850e-47
Msa0530780	Msa1028100	0.821225	4.520746e-53	-8.615850e-47
Msa0546500	Msa1028100	0.810877	9.264395e-51	-8.615850e-47
Msa0580370	Msa1028100	0.845947	2.955497e-59	-8.615850e-47
Msa0584420	Msa1028100	0.814300	1.652705e-51	-8.615850e-47
Msa0587620	Msa1028100	0.803261	3.792811e-49	-8.615850e-47
Msa0600930	Msa1028100	0.809242	2.084905e-50	-8.615850e-47
Msa0967870	Msa1028100	0.817444	3.288164e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1028100	MtrunA17_Chr7g0247761	95.379	541	16	1	1	541	1	532	0.0	1056
Msa1028100	MtrunA17_Chr8g0348921	67.544	342	82	6	1	331	1	324	2.12e-152	444
Msa1028100	MtrunA17_Chr8g0348921	81.699	153	28	0	386	538	318	470	3.82e-81	261
Msa1028100	MtrunA17_Chr4g0004771	42.191	429	170	6	111	538	88	439	5.48e-108	333
Msa1028100	MtrunA17_Chr6g0485861	40.515	427	177	9	113	538	96	446	2.41e-96	303
Msa1028100	MtrunA17_Chr2g0331631	38.407	427	187	6	113	538	86	437	1.56e-89	285
Msa1028100	MtrunA17_Chr7g0240501	62.326	215	80	1	113	326	184	398	2.92e-83	272
Msa1028100	MtrunA17_Chr7g0240501	56.522	161	58	3	386	538	397	553	3.57e-46	171
Msa1028100	MtrunA17_Chr4g0008771	60.731	219	82	1	113	331	96	310	1.79e-81	264
Msa1028100	MtrunA17_Chr4g0008771	54.487	156	59	3	386	533	304	455	1.90e-38	148
Msa1028100	MtrunA17_Chr4g0038651	57.399	223	95	0	109	331	83	305	2.47e-80	261
Msa1028100	MtrunA17_Chr4g0038651	52.866	157	64	4	386	536	299	451	7.60e-40	152
Msa1028100	MtrunA17_Chr3g0112731	58.447	219	91	0	113	331	100	318	6.85e-78	256
Msa1028100	MtrunA17_Chr3g0112731	56.051	157	57	3	386	534	312	464	1.33e-43	163
Msa1028100	MtrunA17_Chr5g0408591	38.588	425	194	7	109	533	114	471	4.54e-77	253
Msa1028100	MtrunA17_Chr5g0436141	58.525	217	90	0	115	331	84	300	4.82e-75	248
Msa1028100	MtrunA17_Chr5g0436141	57.143	161	56	4	381	533	290	445	1.20e-46	171

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1028100	AT4G00460.2	54.113	547	170	13	1	540	1	473	0.0	522
Msa1028100	AT4G00460.4	54.113	547	170	13	1	540	1	473	0.0	522
Msa1028100	AT4G00460.3	57.398	392	103	6	152	540	10	340	2.16e-147	427
Msa1028100	AT1G01700.5	54.085	355	149	8	1	346	1	350	6.58e-114	343
Msa1028100	AT1G01700.2	54.085	355	149	8	1	346	1	350	6.58e-114	343
Msa1028100	AT1G01700.1	55.325	338	139	7	1	329	1	335	5.08e-112	342
Msa1028100	AT1G01700.1	73.548	155	41	0	386	540	331	485	9.27e-72	237
Msa1028100	AT1G01700.3	54.203	345	139	8	1	329	1	342	5.21e-110	336
Msa1028100	AT1G01700.3	65.854	123	42	0	386	508	338	460	4.47e-47	171
Msa1028100	AT4G00460.1	53.779	344	134	10	1	337	1	326	5.04e-108	326
Msa1028100	AT1G01700.4	50.815	368	139	8	1	329	1	365	1.61e-105	326
Msa1028100	AT1G01700.4	73.548	155	41	0	386	540	361	515	1.40e-71	238
Msa1028100	AT1G79860.1	41.995	431	168	8	112	539	91	442	5.39e-104	322
Msa1028100	AT3G55660.1	43.387	431	170	6	110	532	104	468	2.15e-103	323
Msa1028100	AT4G13240.1	41.026	429	175	8	113	540	74	425	4.17e-100	312
Msa1028100	AT3G24620.1	41.135	423	172	7	112	533	84	430	8.36e-100	311
Msa1028100	AT1G52240.1	41.232	422	168	6	114	534	105	447	3.36e-98	308
Msa1028100	AT3G55660.2	41.750	400	159	6	110	501	104	437	4.73e-89	281
Msa1028100	AT2G45890.1	57.143	252	91	5	100	338	80	327	2.65e-87	277
Msa1028100	AT2G45890.1	64.968	157	53	2	386	540	306	462	1.13e-62	213
Msa1028100	AT5G19560.1	38.732	426	180	9	113	534	44	392	1.15e-86	276
Msa1028100	AT5G19560.5	38.732	426	180	9	113	534	44	392	1.15e-86	276
Msa1028100	AT5G19560.4	35.600	500	216	12	39	534	14	411	2.47e-86	276
Msa1028100	AT5G02010.1	61.538	221	83	1	113	331	70	290	4.35e-86	276
Msa1028100	AT5G02010.1	59.603	151	54	3	386	533	284	430	1.14e-48	177
Msa1028100	AT5G05940.2	53.307	257	117	2	109	365	98	351	1.47e-83	268
Msa1028100	AT5G05940.2	52.381	126	46	3	386	501	314	435	5.44e-28	117
Msa1028100	AT3G16130.1	39.030	433	185	10	112	541	89	445	3.07e-83	269
Msa1028100	AT5G05940.1	53.307	257	117	2	109	365	98	351	2.56e-82	268
Msa1028100	AT5G05940.1	55.696	158	56	3	386	533	314	467	2.00e-43	163
Msa1028100	AT4G38430.1	56.388	227	96	1	100	326	80	303	7.48e-78	255
Msa1028100	AT4G38430.1	54.430	158	61	4	386	536	302	455	2.03e-43	162
Msa1028100	AT1G31650.2	36.806	432	194	8	113	538	108	466	3.28e-76	251
Msa1028100	AT1G31650.1	36.806	432	194	8	113	538	136	494	9.46e-76	250
Msa1028100	AT5G19560.2	33.405	467	205	12	39	501	14	378	5.97e-72	234
Msa1028100	AT5G19560.3	34.925	335	137	9	204	534	5	262	3.00e-48	171

Find 111 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAGACTCAGCTGCTATTAT+TGG	0.157288	7_1:-60681987	None:intergenic
CTATTATTGGCTTCCATAAA+AGG	0.163944	7_1:-60681974	None:intergenic
CCTTATAGGGTCACATTTAA+AGG	0.180836	7_1:-60681916	None:intergenic
TGAACTTTCACAAACTTCTT+TGG	0.225497	7_1:+60682555	Msa1028100:CDS
CCTTTAAATGTGACCCTATA+AGG	0.229587	7_1:+60681916	Msa1028100:CDS
GACAATGATCTCTTGGATTC+AGG	0.233036	7_1:+60680502	Msa1028100:CDS
TTCCAAGACATTTGCCTTAT+AGG	0.244815	7_1:-60681930	None:intergenic
TCTACATTCTTCCAAATCTA+AGG	0.248306	7_1:-60682937	None:intergenic
AGATCATCTATATATGTTTC+TGG	0.259898	7_1:-60681737	None:intergenic
AGAAAGCTATTCAAGAGTTT+TGG	0.272823	7_1:+60682780	Msa1028100:CDS
TCCAAGACATTTGCCTTATA+GGG	0.297843	7_1:-60681929	None:intergenic
GTTTACAAAAGACTGTTAAA+TGG	0.299408	7_1:-60682915	None:intergenic
TCCCTTCGCCTTCACCTTCT+CGG	0.302548	7_1:+60680404	Msa1028100:CDS
CGTGCTACTAGTACCTTATA+TGG	0.309555	7_1:-60682032	None:intergenic
AGGCTAAACCTGGTCTTTCT+AGG	0.314752	7_1:+60680434	Msa1028100:CDS
CTAAACTTACCTTGTTGTAT+TGG	0.316872	7_1:-60682591	None:intergenic
AAATTCGCGAAGCTTCTTCT+AGG	0.326700	7_1:+60680801	Msa1028100:CDS
CTTTCGGATACTGCCGAGTT+TGG	0.328934	7_1:+60680305	Msa1028100:CDS
ATGGATAATTCATTCAAGTT+TGG	0.333229	7_1:+60680190	Msa1028100:CDS
CGACGATATAATTCCATATA+AGG	0.335709	7_1:+60682019	Msa1028100:CDS
GAAAGAAGTAAAAGAGCTTA+TGG	0.337222	7_1:+60682450	Msa1028100:CDS
AATTCTGCAGCGACAGTATT+CGG	0.363238	7_1:+60680993	Msa1028100:intron
GTTGAAATATAAAGCATAAC+AGG	0.365363	7_1:+60683054	Msa1028100:three_prime_UTR
TGTCCACAGTATACATATAT+TGG	0.365840	7_1:-60682291	None:intergenic
CACCATTTCTCATCTTTCCT+TGG	0.371604	7_1:-60681575	None:intergenic
GACACAGTCAAGAAGGCGTT+CGG	0.382404	7_1:-60682323	None:intergenic
ACTTGATGACAATGATCTCT+TGG	0.389330	7_1:+60680495	Msa1028100:CDS
CTTCTAAATATTGTGCAGTT+GGG	0.391083	7_1:-60681118	None:intergenic
GTGTCAAGCTTCTGCAGTGC+AGG	0.407014	7_1:-60681353	None:intergenic
AAACCTGGTCTTTCTAGGTT+AGG	0.418055	7_1:+60680439	Msa1028100:CDS
AGATTGAGTGGCGATTCTTT+CGG	0.426841	7_1:+60680289	Msa1028100:CDS
GTATCATCCTTCACCTTCAA+TGG	0.427778	7_1:+60680231	Msa1028100:CDS
CAGAGTGGACGAGGAAATCT+AGG	0.428454	7_1:+60682256	Msa1028100:intron
TGGCATTCAACATTGTTGCT+TGG	0.438300	7_1:+60682809	Msa1028100:CDS
GAAACACCTTACGGAGAAAC+GGG	0.442561	7_1:+60681646	Msa1028100:CDS
GAATGTAGACAGTTAGTAGA+TGG	0.444094	7_1:+60682951	Msa1028100:three_prime_UTR
CCGGGGAGAACACAAGGAAC+TGG	0.444787	7_1:-60681602	None:intergenic
CACATATTCTTGAACTAAGA+TGG	0.447519	7_1:+60680171	Msa1028100:exon
GACTTCTCAGAGAGGCCACC+GGG	0.448393	7_1:-60681620	None:intergenic
AAAGAAGTTTGTGAAAGTTC+AGG	0.448944	7_1:-60682553	None:intergenic
CACAATCCCGTTTCTCCGTA+AGG	0.453280	7_1:-60681652	None:intergenic
ACCCTATAAGGCAAATGTCT+TGG	0.461394	7_1:+60681928	Msa1028100:CDS
GGAAACACCTTACGGAGAAA+CGG	0.462302	7_1:+60681645	Msa1028100:CDS
GAAAGAATTACCGTAGAGAT+TGG	0.465229	7_1:-60680886	None:intergenic
TCTTCTAAATATTGTGCAGT+TGG	0.471414	7_1:-60681119	None:intergenic
CCAGTTCCTTGTGTTCTCCC+CGG	0.471465	7_1:+60681602	Msa1028100:CDS
CTCCAAGGAAAGATGAGAAA+TGG	0.471652	7_1:+60681573	Msa1028100:CDS
ACACAGTCAAGAAGGCGTTC+GGG	0.477977	7_1:-60682322	None:intergenic
ATTCGGACAAAGCTTAAAGT+TGG	0.482979	7_1:+60681010	Msa1028100:CDS
AGCTTATGGATGACACAGAT+TGG	0.490524	7_1:+60682464	Msa1028100:CDS
AAGCAACAATGTTGAATGCC+AGG	0.498483	7_1:-60682807	None:intergenic
CTTGGCAATAGAATTTCAGC+TGG	0.501471	7_1:-60681881	None:intergenic
AGGGAAAGGCGAAGATTCAC+TGG	0.503652	7_1:-60680386	None:intergenic
TCTTTATGTAGATAAATCAA+TGG	0.509070	7_1:+60682843	Msa1028100:CDS
GACATGTCTGGTGGAGGGAA+AGG	0.515039	7_1:+60680828	Msa1028100:CDS
ACTAAATGATGATCCATTGA+AGG	0.518471	7_1:-60680244	None:intergenic
CTTCTAGGAGAAGACATGTC+TGG	0.518863	7_1:+60680816	Msa1028100:CDS
CATGTGGAAAAGAGAAATGA+AGG	0.523280	7_1:+60681058	Msa1028100:CDS
TTTAGAAGATGGCACAATTG+TGG	0.526926	7_1:+60681133	Msa1028100:CDS
GAAGGTGAAGGCGAAGGGAA+AGG	0.528059	7_1:-60680400	None:intergenic
TGACTTCTCAGAGAGGCCAC+CGG	0.528368	7_1:-60681621	None:intergenic
TCTTTCAGATGATGAAAAGC+AGG	0.530067	7_1:+60681303	Msa1028100:intron
TACGCGCAGCCTCGTTTCGA+AGG	0.530209	7_1:+60681546	Msa1028100:CDS
AGGCCACCGGGGAGAACACA+AGG	0.530986	7_1:-60681608	None:intergenic
CATCTGAACTTGTCCAAACT+CGG	0.532701	7_1:-60680318	None:intergenic
GAAGAGAAACATTCTTGTGA+TGG	0.535798	7_1:-60682893	None:intergenic
GGAGAAGACATGTCTGGTGG+AGG	0.539294	7_1:+60680822	Msa1028100:CDS
CGGTGGAGAGAGGCTAAACC+TGG	0.540529	7_1:+60680424	Msa1028100:CDS
TTCTAAATATTGTGCAGTTG+GGG	0.542515	7_1:-60681117	None:intergenic
TTAGTCATTCAAAGTCATCA+TGG	0.545171	7_1:+60682428	Msa1028100:CDS
TTGATATAAATATCTGACCT+TGG	0.549418	7_1:-60681326	None:intergenic
TAAAGGAATCATCAATCACT+TGG	0.551161	7_1:-60681899	None:intergenic
ACTGCACAATATTTAGAAGA+TGG	0.552337	7_1:+60681122	Msa1028100:CDS
TTAATTTGACACAGTCAAGA+AGG	0.556029	7_1:-60682330	None:intergenic
GTTCAGGATATCTTTGCTTG+AGG	0.557074	7_1:-60682537	None:intergenic
TCAAATTCATAAAGCAGCAA+TGG	0.559529	7_1:+60681679	Msa1028100:CDS
AAGCACTTGATCTAGCAGAC+AGG	0.561427	7_1:+60682365	Msa1028100:CDS
AGGTGAGCTTGAAATGATGA+AGG	0.561510	7_1:+60680776	Msa1028100:intron
CACCGAGAAGGTGAAGGCGA+AGG	0.567574	7_1:-60680406	None:intergenic
TAATTTCTTCAGAGTGGACG+AGG	0.573453	7_1:+60682247	Msa1028100:intron
TTCACCTTCTCGGTGGAGAG+AGG	0.578830	7_1:+60680414	Msa1028100:CDS
TATGGATGACACAGATTGGA+AGG	0.579189	7_1:+60682468	Msa1028100:CDS
ACCGAGAAGGTGAAGGCGAA+GGG	0.580301	7_1:-60680405	None:intergenic
ATTACCGTAGAGATTGGTAA+TGG	0.583340	7_1:-60680880	None:intergenic
ATTCCTAACCTAGAAAGACC+AGG	0.583658	7_1:-60680442	None:intergenic
CTTCGCCTTCACCTTCTCGG+TGG	0.583766	7_1:+60680407	Msa1028100:CDS
TCTCTCCACCGAGAAGGTGA+AGG	0.584475	7_1:-60680412	None:intergenic
GTGGCCTCTCTGAGAAGTCA+AGG	0.590461	7_1:+60681624	Msa1028100:CDS
ATATATAGATGATCTTCCAC+AGG	0.596411	7_1:+60681745	Msa1028100:CDS
CGTTTCGAAGGATTGCTCCA+AGG	0.600239	7_1:+60681558	Msa1028100:CDS
AATGCCATTACCAATCTCTA+CGG	0.606376	7_1:+60680876	Msa1028100:CDS
TGTCAAGCTTCTGCAGTGCA+GGG	0.607994	7_1:-60681352	None:intergenic
AACGAGGCTGCGCGTAAACG+AGG	0.608608	7_1:-60681539	None:intergenic
AGATGATGAAAAGCAGGCCA+AGG	0.612297	7_1:+60681309	Msa1028100:intron
GTTCCTTGTGTTCTCCCCGG+TGG	0.614320	7_1:+60681605	Msa1028100:CDS
GAGAAGACATGTCTGGTGGA+GGG	0.615927	7_1:+60680823	Msa1028100:CDS
TTAGCCTCTCTCCACCGAGA+AGG	0.616988	7_1:-60680418	None:intergenic
TGGAGCAATCCTTCGAAACG+AGG	0.621042	7_1:-60681555	None:intergenic
GTTTGGTGAAAATTCTGATG+TGG	0.623453	7_1:+60680207	Msa1028100:CDS
GAAGTCAAGGAAACACCTTA+CGG	0.627190	7_1:+60681637	Msa1028100:CDS
TGATGATCCATTGAAGGTGA+AGG	0.630506	7_1:-60680238	None:intergenic
AGAAGATGGCACAATTGTGG+AGG	0.635109	7_1:+60681136	Msa1028100:CDS
AGCACTTGATCTAGCAGACA+GGG	0.643640	7_1:+60682366	Msa1028100:CDS
CTAGGAGAAGACATGTCTGG+TGG	0.645913	7_1:+60680819	Msa1028100:CDS
CAAGGAAAGATGAGAAATGG+TGG	0.648761	7_1:+60681576	Msa1028100:CDS
TTGAATCATCGATGTACACA+TGG	0.667957	7_1:+60682389	Msa1028100:CDS
TTACCAATATATGTATACTG+TGG	0.673146	7_1:+60682288	Msa1028100:CDS
GTTTCCTTGACTTCTCAGAG+AGG	0.693317	7_1:-60681628	None:intergenic
ATGCAAGATCCAATACAACA+AGG	0.709340	7_1:+60682582	Msa1028100:CDS
ACTTCTCAGAGAGGCCACCG+GGG	0.720694	7_1:-60681619	None:intergenic
AGCCTGAGAAGAAAACCATG+TGG	0.741104	7_1:+60681042	Msa1028100:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTATTACTACTTAAAA+GGG	-	chr7_1:60682093-60682112	None:intergenic	10.0%
!!!	ATTTTTTATTACTACTTAAA+AGG	-	chr7_1:60682094-60682113	None:intergenic	10.0%
!!	TTGAATTGTTCATATTTAAT+AGG	-	chr7_1:60680606-60680625	None:intergenic	15.0%
!!	TAATTGAAAATGTTTGTATT+TGG	+	chr7_1:60680969-60680988	Msa1028100:intron	15.0%
!!	CATAGATATAGAAAAACAAA+AGG	-	chr7_1:60680005-60680024	None:intergenic	20.0%
!!!	CTTTTGTTTTTCTATATCTA+TGG	+	chr7_1:60680003-60680022	Msa1028100:five_prime_UTR	20.0%
!!	TTTCATCTTAGAATTTAGTT+TGG	+	chr7_1:60680555-60680574	Msa1028100:intron	20.0%
!!	ATAGTATGATAAAAAAAGAG+AGG	+	chr7_1:60680922-60680941	Msa1028100:intron	20.0%
!!	TCTATAAAAAGAACATCATT+TGG	-	chr7_1:60681175-60681194	None:intergenic	20.0%
!!	TCTTTATGTAGATAAATCAA+TGG	+	chr7_1:60682843-60682862	Msa1028100:CDS	20.0%
!!	ATGGATAATTCATTCAAGTT+TGG	+	chr7_1:60680190-60680209	Msa1028100:CDS	25.0%
!	AACAATTCAATCTAGACAAT+AGG	+	chr7_1:60680616-60680635	Msa1028100:intron	25.0%
!	ACAATTCAATCTAGACAATA+GGG	+	chr7_1:60680617-60680636	Msa1028100:intron	25.0%
!!!	AGTTTAGTTTTGTCAACATT+AGG	+	chr7_1:60680756-60680775	Msa1028100:intron	25.0%
!	TTGATATAAATATCTGACCT+TGG	-	chr7_1:60681329-60681348	None:intergenic	25.0%
!!	GGAAATATTAGATTCTTTTG+AGG	+	chr7_1:60681475-60681494	Msa1028100:intron	25.0%
!	AGATCATCTATATATGTTTC+TGG	-	chr7_1:60681740-60681759	None:intergenic	25.0%
!!	CAAATTTCATAAGCCTTTTA+TGG	+	chr7_1:60681961-60681980	Msa1028100:CDS	25.0%
!	AAACAATAATTTCTTCAGAG+TGG	+	chr7_1:60682241-60682260	Msa1028100:intron	25.0%
!	TTACCAATATATGTATACTG+TGG	+	chr7_1:60682288-60682307	Msa1028100:CDS	25.0%
!	AATTGGAGACATTTCTATTT+AGG	+	chr7_1:60682704-60682723	Msa1028100:intron	25.0%
!	GTTTACAAAAGACTGTTAAA+TGG	-	chr7_1:60682918-60682937	None:intergenic	25.0%
!!	TCTTTTGTAAACCTTAGATT+TGG	+	chr7_1:60682926-60682945	Msa1028100:three_prime_UTR	25.0%
!	GTTGAAATATAAAGCATAAC+AGG	+	chr7_1:60683054-60683073	Msa1028100:three_prime_UTR	25.0%
	CACATATTCTTGAACTAAGA+TGG	+	chr7_1:60680171-60680190	Msa1028100:exon	30.0%
	ACTAAATGATGATCCATTGA+AGG	-	chr7_1:60680247-60680266	None:intergenic	30.0%
	AATAAGACTATGTCATCTAG+TGG	-	chr7_1:60680663-60680682	None:intergenic	30.0%
	TCATCTTAGAATTGTGACTT+GGG	-	chr7_1:60680728-60680747	None:intergenic	30.0%
	TTCTAAATATTGTGCAGTTG+GGG	-	chr7_1:60681120-60681139	None:intergenic	30.0%
	CTTCTAAATATTGTGCAGTT+GGG	-	chr7_1:60681121-60681140	None:intergenic	30.0%
	TCTTCTAAATATTGTGCAGT+TGG	-	chr7_1:60681122-60681141	None:intergenic	30.0%
	ACTGCACAATATTTAGAAGA+TGG	+	chr7_1:60681122-60681141	Msa1028100:CDS	30.0%
	TCGACGTTATAGTTATCATT+TGG	-	chr7_1:60681250-60681269	None:intergenic	30.0%
	TTGCATGAAAGAAGAAAATG+AGG	-	chr7_1:60681399-60681418	None:intergenic	30.0%
!	AACATGAAAATGTTGTTTGC+AGG	+	chr7_1:60681454-60681473	Msa1028100:intron	30.0%
	TCAAATTCATAAAGCAGCAA+TGG	+	chr7_1:60681679-60681698	Msa1028100:CDS	30.0%
	ATATATAGATGATCTTCCAC+AGG	+	chr7_1:60681745-60681764	Msa1028100:CDS	30.0%
	AGGAATGTTCTTCAACAATA+GGG	-	chr7_1:60681794-60681813	None:intergenic	30.0%
	AAGGAATGTTCTTCAACAAT+AGG	-	chr7_1:60681795-60681814	None:intergenic	30.0%
!	GATCAAGACTTTCTGAAAAA+AGG	-	chr7_1:60681814-60681833	None:intergenic	30.0%
	TAAAGGAATCATCAATCACT+TGG	-	chr7_1:60681902-60681921	None:intergenic	30.0%
!!	CTATTATTGGCTTCCATAAA+AGG	-	chr7_1:60681977-60681996	None:intergenic	30.0%
	CGACGATATAATTCCATATA+AGG	+	chr7_1:60682019-60682038	Msa1028100:CDS	30.0%
	TGTCCACAGTATACATATAT+TGG	-	chr7_1:60682294-60682313	None:intergenic	30.0%
!	TTAATTTGACACAGTCAAGA+AGG	-	chr7_1:60682333-60682352	None:intergenic	30.0%
	TTAGTCATTCAAAGTCATCA+TGG	+	chr7_1:60682428-60682447	Msa1028100:CDS	30.0%
	GAAAGAAGTAAAAGAGCTTA+TGG	+	chr7_1:60682450-60682469	Msa1028100:CDS	30.0%
	AAAGAAGTTTGTGAAAGTTC+AGG	-	chr7_1:60682556-60682575	None:intergenic	30.0%
	TGAACTTTCACAAACTTCTT+TGG	+	chr7_1:60682555-60682574	Msa1028100:CDS	30.0%
!	CTAAACTTACCTTGTTGTAT+TGG	-	chr7_1:60682594-60682613	None:intergenic	30.0%
!	GAATGAAAATCATCTTTTGC+AGG	+	chr7_1:60682738-60682757	Msa1028100:intron	30.0%
!	AGAAAGCTATTCAAGAGTTT+TGG	+	chr7_1:60682780-60682799	Msa1028100:CDS	30.0%
	TCTACATTCTTCCAAATCTA+AGG	-	chr7_1:60682940-60682959	None:intergenic	30.0%
!	GTTTGGTGAAAATTCTGATG+TGG	+	chr7_1:60680207-60680226	Msa1028100:CDS	35.0%
!	ACTTGATGACAATGATCTCT+TGG	+	chr7_1:60680495-60680514	Msa1028100:CDS	35.0%
	ATTCAATCTAGACAATAGGG+CGG	+	chr7_1:60680620-60680639	Msa1028100:intron	35.0%
	CATCTTAGAATTGTGACTTG+GGG	-	chr7_1:60680727-60680746	None:intergenic	35.0%
	GTCATCTTAGAATTGTGACT+TGG	-	chr7_1:60680729-60680748	None:intergenic	35.0%
	AATGCCATTACCAATCTCTA+CGG	+	chr7_1:60680876-60680895	Msa1028100:CDS	35.0%
	ATTACCGTAGAGATTGGTAA+TGG	-	chr7_1:60680883-60680902	None:intergenic	35.0%
	GAAAGAATTACCGTAGAGAT+TGG	-	chr7_1:60680889-60680908	None:intergenic	35.0%
	ATTCGGACAAAGCTTAAAGT+TGG	+	chr7_1:60681010-60681029	Msa1028100:CDS	35.0%
!	CTTCATTTCTCTTTTCCACA+TGG	-	chr7_1:60681060-60681079	None:intergenic	35.0%
	CATGTGGAAAAGAGAAATGA+AGG	+	chr7_1:60681058-60681077	Msa1028100:CDS	35.0%
	TTTAGAAGATGGCACAATTG+TGG	+	chr7_1:60681133-60681152	Msa1028100:CDS	35.0%
!	ATAGTTATCATTTGGCTCGA+TGG	-	chr7_1:60681242-60681261	None:intergenic	35.0%
	CCATATTAGAGATCACAAAC+AGG	-	chr7_1:60681278-60681297	None:intergenic	35.0%
	CCTGTTTGTGATCTCTAATA+TGG	+	chr7_1:60681275-60681294	Msa1028100:intron	35.0%
	TCTTTCAGATGATGAAAAGC+AGG	+	chr7_1:60681303-60681322	Msa1028100:intron	35.0%
	TAGGGATCAATCAACAATGA+AGG	-	chr7_1:60681776-60681795	None:intergenic	35.0%
	CCTTATAGGGTCACATTTAA+AGG	-	chr7_1:60681919-60681938	None:intergenic	35.0%
	CCTTTAAATGTGACCCTATA+AGG	+	chr7_1:60681916-60681935	Msa1028100:CDS	35.0%
	TCCAAGACATTTGCCTTATA+GGG	-	chr7_1:60681932-60681951	None:intergenic	35.0%
	TTCCAAGACATTTGCCTTAT+AGG	-	chr7_1:60681933-60681952	None:intergenic	35.0%
	TTGAATCATCGATGTACACA+TGG	+	chr7_1:60682389-60682408	Msa1028100:CDS	35.0%
	ATGCAAGATCCAATACAACA+AGG	+	chr7_1:60682582-60682601	Msa1028100:CDS	35.0%
!	TTCATTCCATATGCTAGCTT+AGG	-	chr7_1:60682685-60682704	None:intergenic	35.0%
	GCTAGCATATGGAATGAAAT+TGG	+	chr7_1:60682687-60682706	Msa1028100:intron	35.0%
!	AAATCATCTTTTGCAGGATG+TGG	+	chr7_1:60682744-60682763	Msa1028100:intron	35.0%
!	AATCATCTTTTGCAGGATGT+GGG	+	chr7_1:60682745-60682764	Msa1028100:intron	35.0%
!!!	AGCTATTCAAGAGTTTTGGA+AGG	+	chr7_1:60682784-60682803	Msa1028100:CDS	35.0%
	GAAGAGAAACATTCTTGTGA+TGG	-	chr7_1:60682896-60682915	None:intergenic	35.0%
	GAATGTAGACAGTTAGTAGA+TGG	+	chr7_1:60682951-60682970	Msa1028100:three_prime_UTR	35.0%
	GTATCATCCTTCACCTTCAA+TGG	+	chr7_1:60680231-60680250	Msa1028100:CDS	40.0%
	TGATGATCCATTGAAGGTGA+AGG	-	chr7_1:60680241-60680260	None:intergenic	40.0%
	CCACTCAATCTAGAAAAAGC+AGG	-	chr7_1:60680280-60680299	None:intergenic	40.0%
!!!	CCTGCTTTTTCTAGATTGAG+TGG	+	chr7_1:60680277-60680296	Msa1028100:CDS	40.0%
	AGATTGAGTGGCGATTCTTT+CGG	+	chr7_1:60680289-60680308	Msa1028100:CDS	40.0%
	CATCTGAACTTGTCCAAACT+CGG	-	chr7_1:60680321-60680340	None:intergenic	40.0%
!	AAACCTGGTCTTTCTAGGTT+AGG	+	chr7_1:60680439-60680458	Msa1028100:CDS	40.0%
	ATTCCTAACCTAGAAAGACC+AGG	-	chr7_1:60680445-60680464	None:intergenic	40.0%
	GACAATGATCTCTTGGATTC+AGG	+	chr7_1:60680502-60680521	Msa1028100:CDS	40.0%
!!	CATAGTCTTATTCCTACCAG+CGG	+	chr7_1:60680671-60680690	Msa1028100:intron	40.0%
	AGGTGAGCTTGAAATGATGA+AGG	+	chr7_1:60680776-60680795	Msa1028100:intron	40.0%
	AAATTCGCGAAGCTTCTTCT+AGG	+	chr7_1:60680801-60680820	Msa1028100:CDS	40.0%
	AATTCTGCAGCGACAGTATT+CGG	+	chr7_1:60680993-60681012	Msa1028100:intron	40.0%
!	TTCCACATGGTTTTCTTCTC+AGG	-	chr7_1:60681047-60681066	None:intergenic	40.0%
!!	CTTTTGAGGATACTGAGTTC+TGG	+	chr7_1:60681489-60681508	Msa1028100:CDS	40.0%
	CTCCAAGGAAAGATGAGAAA+TGG	+	chr7_1:60681573-60681592	Msa1028100:CDS	40.0%
	CACCATTTCTCATCTTTCCT+TGG	-	chr7_1:60681578-60681597	None:intergenic	40.0%
	CAAGGAAAGATGAGAAATGG+TGG	+	chr7_1:60681576-60681595	Msa1028100:CDS	40.0%
	GAAGTCAAGGAAACACCTTA+CGG	+	chr7_1:60681637-60681656	Msa1028100:CDS	40.0%
	AACAATGAAGGCTAAACCTG+TGG	-	chr7_1:60681764-60681783	None:intergenic	40.0%
	CTTGGCAATAGAATTTCAGC+TGG	-	chr7_1:60681884-60681903	None:intergenic	40.0%
	ACCCTATAAGGCAAATGTCT+TGG	+	chr7_1:60681928-60681947	Msa1028100:CDS	40.0%
	CAAGACTCAGCTGCTATTAT+TGG	-	chr7_1:60681990-60682009	None:intergenic	40.0%
!	CGTGCTACTAGTACCTTATA+TGG	-	chr7_1:60682035-60682054	None:intergenic	40.0%
	TAATTTCTTCAGAGTGGACG+AGG	+	chr7_1:60682247-60682266	Msa1028100:intron	40.0%
	AGCTTATGGATGACACAGAT+TGG	+	chr7_1:60682464-60682483	Msa1028100:CDS	40.0%
	TATGGATGACACAGATTGGA+AGG	+	chr7_1:60682468-60682487	Msa1028100:CDS	40.0%
	GTTCAGGATATCTTTGCTTG+AGG	-	chr7_1:60682540-60682559	None:intergenic	40.0%
!	ATCATCTTTTGCAGGATGTG+GGG	+	chr7_1:60682746-60682765	Msa1028100:intron	40.0%
	AAGCAACAATGTTGAATGCC+AGG	-	chr7_1:60682810-60682829	None:intergenic	40.0%
	TGGCATTCAACATTGTTGCT+TGG	+	chr7_1:60682809-60682828	Msa1028100:CDS	40.0%
!	AGGCTAAACCTGGTCTTTCT+AGG	+	chr7_1:60680434-60680453	Msa1028100:CDS	45.0%
!	CTTCTAGGAGAAGACATGTC+TGG	+	chr7_1:60680816-60680835	Msa1028100:CDS	45.0%
!	GTTTTCTTCTCAGGCTTCAG+CGG	-	chr7_1:60681038-60681057	None:intergenic	45.0%
	AGCCTGAGAAGAAAACCATG+TGG	+	chr7_1:60681042-60681061	Msa1028100:CDS	45.0%
	AGAAGATGGCACAATTGTGG+AGG	+	chr7_1:60681136-60681155	Msa1028100:CDS	45.0%
	AGATGATGAAAAGCAGGCCA+AGG	+	chr7_1:60681309-60681328	Msa1028100:intron	45.0%
	GTTTCCTTGACTTCTCAGAG+AGG	-	chr7_1:60681631-60681650	None:intergenic	45.0%
	GGAAACACCTTACGGAGAAA+CGG	+	chr7_1:60681645-60681664	Msa1028100:CDS	45.0%
	GAAACACCTTACGGAGAAAC+GGG	+	chr7_1:60681646-60681665	Msa1028100:CDS	45.0%
	AAGCACTTGATCTAGCAGAC+AGG	+	chr7_1:60682365-60682384	Msa1028100:CDS	45.0%
	AGCACTTGATCTAGCAGACA+GGG	+	chr7_1:60682366-60682385	Msa1028100:CDS	45.0%
	TCCAGTCCTAAGCTAGCATA+TGG	+	chr7_1:60682676-60682695	Msa1028100:intron	45.0%
!	TCCATATGCTAGCTTAGGAC+TGG	-	chr7_1:60682680-60682699	None:intergenic	45.0%
!!!	TTCAAGAGTTTTGGAAGGCC+TGG	+	chr7_1:60682789-60682808	Msa1028100:CDS	45.0%
	CTTTCGGATACTGCCGAGTT+TGG	+	chr7_1:60680305-60680324	Msa1028100:CDS	50.0%
	AGGGAAAGGCGAAGATTCAC+TGG	-	chr7_1:60680389-60680408	None:intergenic	50.0%
	TAGTGGAACCTTCGCGCATT+AGG	-	chr7_1:60680646-60680665	None:intergenic	50.0%
	GAAACAATCTCTCCGCTGGT+AGG	-	chr7_1:60680686-60680705	None:intergenic	50.0%
	CCTAGAAACAATCTCTCCGC+TGG	-	chr7_1:60680690-60680709	None:intergenic	50.0%
!	CCAGCGGAGAGATTGTTTCT+AGG	+	chr7_1:60680687-60680706	Msa1028100:intron	50.0%
	CTAGGAGAAGACATGTCTGG+TGG	+	chr7_1:60680819-60680838	Msa1028100:CDS	50.0%
	GAGAAGACATGTCTGGTGGA+GGG	+	chr7_1:60680823-60680842	Msa1028100:CDS	50.0%
!	ATCATTTGGCTCGATGGCGA+AGG	-	chr7_1:60681236-60681255	None:intergenic	50.0%
	TGTCAAGCTTCTGCAGTGCA+GGG	-	chr7_1:60681355-60681374	None:intergenic	50.0%
	TGGAGCAATCCTTCGAAACG+AGG	-	chr7_1:60681558-60681577	None:intergenic	50.0%
	CGTTTCGAAGGATTGCTCCA+AGG	+	chr7_1:60681558-60681577	Msa1028100:CDS	50.0%
	CACAATCCCGTTTCTCCGTA+AGG	-	chr7_1:60681655-60681674	None:intergenic	50.0%
	CAGAGTGGACGAGGAAATCT+AGG	+	chr7_1:60682256-60682275	Msa1028100:intron	50.0%
!!	ACACAGTCAAGAAGGCGTTC+GGG	-	chr7_1:60682325-60682344	None:intergenic	50.0%
!!	GACACAGTCAAGAAGGCGTT+CGG	-	chr7_1:60682326-60682345	None:intergenic	50.0%
	GAAGGTGAAGGCGAAGGGAA+AGG	-	chr7_1:60680403-60680422	None:intergenic	55.0%
	TCCCTTCGCCTTCACCTTCT+CGG	+	chr7_1:60680404-60680423	Msa1028100:CDS	55.0%
	ACCGAGAAGGTGAAGGCGAA+GGG	-	chr7_1:60680408-60680427	None:intergenic	55.0%
	TCTCTCCACCGAGAAGGTGA+AGG	-	chr7_1:60680415-60680434	None:intergenic	55.0%
	TTCACCTTCTCGGTGGAGAG+AGG	+	chr7_1:60680414-60680433	Msa1028100:CDS	55.0%
	TTAGCCTCTCTCCACCGAGA+AGG	-	chr7_1:60680421-60680440	None:intergenic	55.0%
	GGAGAAGACATGTCTGGTGG+AGG	+	chr7_1:60680822-60680841	Msa1028100:CDS	55.0%
	GACATGTCTGGTGGAGGGAA+AGG	+	chr7_1:60680828-60680847	Msa1028100:CDS	55.0%
	GTGTCAAGCTTCTGCAGTGC+AGG	-	chr7_1:60681356-60681375	None:intergenic	55.0%
	CCAGTTCCTTGTGTTCTCCC+CGG	+	chr7_1:60681602-60681621	Msa1028100:CDS	55.0%
	TGACTTCTCAGAGAGGCCAC+CGG	-	chr7_1:60681624-60681643	None:intergenic	55.0%
!	GTGGCCTCTCTGAGAAGTCA+AGG	+	chr7_1:60681624-60681643	Msa1028100:CDS	55.0%
	CACCGAGAAGGTGAAGGCGA+AGG	-	chr7_1:60680409-60680428	None:intergenic	60.0%
	CTTCGCCTTCACCTTCTCGG+TGG	+	chr7_1:60680407-60680426	Msa1028100:CDS	60.0%
	CGGTGGAGAGAGGCTAAACC+TGG	+	chr7_1:60680424-60680443	Msa1028100:CDS	60.0%
	AACGAGGCTGCGCGTAAACG+AGG	-	chr7_1:60681542-60681561	None:intergenic	60.0%
	TACGCGCAGCCTCGTTTCGA+AGG	+	chr7_1:60681546-60681565	Msa1028100:CDS	60.0%
	CCGGGGAGAACACAAGGAAC+TGG	-	chr7_1:60681605-60681624	None:intergenic	60.0%
	GTTCCTTGTGTTCTCCCCGG+TGG	+	chr7_1:60681605-60681624	Msa1028100:CDS	60.0%
	ACTTCTCAGAGAGGCCACCG+GGG	-	chr7_1:60681622-60681641	None:intergenic	60.0%
	GACTTCTCAGAGAGGCCACC+GGG	-	chr7_1:60681623-60681642	None:intergenic	60.0%
	TAGGGCGGCCTAATGCGCGA+AGG	+	chr7_1:60680635-60680654	Msa1028100:intron	65.0%
	AGGCCACCGGGGAGAACACA+AGG	-	chr7_1:60681611-60681630	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_1	gene	60679969	60683108	60679969	ID=Msa1028100;Name=Msa1028100
chr7_1	mRNA	60679969	60683108	60679969	ID=Msa1028100-mRNA-1;Parent=Msa1028100;Name=Msa1028100-mRNA-1;_AED=0.15;_eAED=0.15;_QI=200\|0.87\|0.88\|1\|0.87\|0.77\|9\|226\|541
chr7_1	exon	60679969	60680121	60679969	ID=Msa1028100-mRNA-1:exon:12626;Parent=Msa1028100-mRNA-1
chr7_1	exon	60680143	60680523	60680143	ID=Msa1028100-mRNA-1:exon:12627;Parent=Msa1028100-mRNA-1
chr7_1	exon	60680778	60680897	60680778	ID=Msa1028100-mRNA-1:exon:12628;Parent=Msa1028100-mRNA-1
chr7_1	exon	60681003	60681157	60681003	ID=Msa1028100-mRNA-1:exon:12629;Parent=Msa1028100-mRNA-1
chr7_1	exon	60681311	60681385	60681311	ID=Msa1028100-mRNA-1:exon:12630;Parent=Msa1028100-mRNA-1
chr7_1	exon	60681476	60681766	60681476	ID=Msa1028100-mRNA-1:exon:12631;Parent=Msa1028100-mRNA-1
chr7_1	exon	60681858	60682040	60681858	ID=Msa1028100-mRNA-1:exon:12632;Parent=Msa1028100-mRNA-1
chr7_1	exon	60682259	60682603	60682259	ID=Msa1028100-mRNA-1:exon:12633;Parent=Msa1028100-mRNA-1
chr7_1	exon	60682760	60683108	60682760	ID=Msa1028100-mRNA-1:exon:12634;Parent=Msa1028100-mRNA-1
chr7_1	five_prime_UTR	60679969	60680121	60679969	ID=Msa1028100-mRNA-1:five_prime_utr;Parent=Msa1028100-mRNA-1
chr7_1	five_prime_UTR	60680143	60680189	60680143	ID=Msa1028100-mRNA-1:five_prime_utr;Parent=Msa1028100-mRNA-1
chr7_1	CDS	60680190	60680523	60680190	ID=Msa1028100-mRNA-1:cds;Parent=Msa1028100-mRNA-1
chr7_1	CDS	60680778	60680897	60680778	ID=Msa1028100-mRNA-1:cds;Parent=Msa1028100-mRNA-1
chr7_1	CDS	60681003	60681157	60681003	ID=Msa1028100-mRNA-1:cds;Parent=Msa1028100-mRNA-1
chr7_1	CDS	60681311	60681385	60681311	ID=Msa1028100-mRNA-1:cds;Parent=Msa1028100-mRNA-1
chr7_1	CDS	60681476	60681766	60681476	ID=Msa1028100-mRNA-1:cds;Parent=Msa1028100-mRNA-1
chr7_1	CDS	60681858	60682040	60681858	ID=Msa1028100-mRNA-1:cds;Parent=Msa1028100-mRNA-1
chr7_1	CDS	60682259	60682603	60682259	ID=Msa1028100-mRNA-1:cds;Parent=Msa1028100-mRNA-1
chr7_1	CDS	60682760	60682882	60682760	ID=Msa1028100-mRNA-1:cds;Parent=Msa1028100-mRNA-1
chr7_1	three_prime_UTR	60682883	60683108	60682883	ID=Msa1028100-mRNA-1:three_prime_utr;Parent=Msa1028100-mRNA-1

Gene Sequence

>Msa1028100

ATGGATAATTCATTCAAGTTTGGTGAAAATTCTGATGTGGAGTATCATCCTTCACCTTCAATGGATCATCATTTAGTCAGTGACACTCCTGCTTTTTCTAGATTGAGTGGCGATTCTTTCGGATACTGCCGAGTTTGGACAAGTTCAGATGCATCAAACTCAAACTTCTCAGATTCTGTAGATGATAGCAGCTATGCCAGTGAATCTTCGCCTTTCCCTTCGCCTTCACCTTCTCGGTGGAGAGAGGCTAAACCTGGTCTTTCTAGGTTAGGAATGAAGCTACGCAAGCATTCGATCGATGAAAAACTTGATGACAATGATCTCTTGGATTCAGGTGAGCTTGAAATGATGAAGGAAAAATTCGCGAAGCTTCTTCTAGGAGAAGACATGTCTGGTGGAGGGAAAGGTGTTAGCACAGCAGTTACAATCTCAAATGCCATTACCAATCTCTACGCGACAGTATTCGGACAAAGCTTAAAGTTGGAGCCGCTGAAGCCTGAGAAGAAAACCATGTGGAAAAGAGAAATGAAGGTTCTTCTATCTGTGTGTGATTACATACAAGAATTTGCCCCAACTGCACAATATTTAGAAGATGGCACAATTGTGGAGATGATGAAAAGCAGGCCAAGGTCAGATATTTATATCAATCTCCCTGCACTGCAGAAGCTTGACACAATGCTTATAGAAATATTAGATTCTTTTGAGGATACTGAGTTCTGGTATGCAGAGAACGTATCAGAAAGTTCGCCTCGTTTACGCGCAGCCTCGTTTCGAAGGATTGCTCCAAGGAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTGTTCTCCCCGGTGGCCTCTCTGAGAAGTCAAGGAAACACCTTACGGAGAAACGGGATTGTGCTAATCAAATTCATAAAGCAGCAATGGCGATAAATAGTAATATTCTTGCAGACATAGATATTCCAGAAACATATATAGATGATCTTCCACAGAATAAGTCTGCATTTCTTTTTTTCCAGCTGAAATTCTATTGCCAAGTGATTGATGATTCCTTTAAATGTGACCCTATAAGGCAAATGTCTTGGAATTTATCATCAAATTTCATAAGCCTTTTATGGAAGCCAATAATAGCAGCTGAGTCTTGTAAAAAACGCGACGATATAATTCCATATAAGAGTGGACGAGGAAATCTAGGCGACACAATTTACCAATATATGTATACTGTGGACAAGTTCTCACCCGAACGCCTTCTTGACTGTGTCAAATTAAGCTCTGAACATGAAGCACTTGATCTAGCAGACAGGGTTGAATCATCGATGTACACATGGAGACGTAAAGCTTGTCTTAGTCATTCAAAGTCATCATGGAAAGAAGTAAAAGAGCTTATGGATGACACAGATTGGAAGGACAAAAACTACATTTTAGCTGATCGAGCAGAAGCTTTGCTGTTTAGCCTCAAGCAAAGATATCCTGAACTTTCACAAACTTCTTTGGACACATGCAAGATCCAATACAACAAGGATGTGGGGAAAGCAGTACTAGAAAGCTATTCAAGAGTTTTGGAAGGCCTGGCATTCAACATTGTTGCTTGGATTGAAGATGTTCTTTATGTAGATAAATCAATGGCGAATCGAGAAGTCTAG

Protein sequence

>Msa1028100

MDNSFKFGENSDVEYHPSPSMDHHLVSDTPAFSRLSGDSFGYCRVWTSSDASNSNFSDSVDDSSYASESSPFPSPSPSRWREAKPGLSRLGMKLRKHSIDEKLDDNDLLDSGELEMMKEKFAKLLLGEDMSGGGKGVSTAVTISNAITNLYATVFGQSLKLEPLKPEKKTMWKREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILDSFEDTEFWYAENVSESSPRLRAASFRRIAPRKDEKWWLPVPCVLPGGLSEKSRKHLTEKRDCANQIHKAAMAINSNILADIDIPETYIDDLPQNKSAFLFFQLKFYCQVIDDSFKCDPIRQMSWNLSSNFISLLWKPIIAAESCKKRDDIIPYKSGRGNLGDTIYQYMYTVDKFSPERLLDCVKLSSEHEALDLADRVESSMYTWRRKACLSHSKSSWKEVKELMDDTDWKDKNYILADRAEALLFSLKQRYPELSQTSLDTCKIQYNKDVGKAVLESYSRVLEGLAFNIVAWIEDVLYVDKSMANREV*