Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117920 | XP_003624821.1 | 95.252 | 337 | 16 | 0 | 1 | 337 | 1 | 337 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117920 | G7L3Q5 | 95.252 | 337 | 16 | 0 | 1 | 337 | 1 | 337 | 0.0 | 607 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa1117920 | 0.802956 | 4.385837e-49 | -8.615850e-47 |
| Msa0018160 | Msa1117920 | 0.813604 | 2.352829e-51 | -8.615850e-47 |
| Msa0021500 | Msa1117920 | 0.814612 | 1.409971e-51 | -8.615850e-47 |
| Msa0025580 | Msa1117920 | 0.810526 | 1.103101e-50 | -8.615850e-47 |
| Msa0034210 | Msa1117920 | 0.809176 | 2.153383e-50 | -8.615850e-47 |
| Msa0036870 | Msa1117920 | 0.810478 | 1.129871e-50 | -8.615850e-47 |
| Msa0052260 | Msa1117920 | 0.804633 | 1.966986e-49 | -8.615850e-47 |
| Msa0054690 | Msa1117920 | 0.844560 | 7.007879e-59 | -8.615850e-47 |
| Msa0090400 | Msa1117920 | 0.814164 | 1.770832e-51 | -8.615850e-47 |
| Msa0626450 | Msa1117920 | 0.812362 | 4.404498e-51 | -8.615850e-47 |
| Msa0626490 | Msa1117920 | 0.808476 | 3.039338e-50 | -8.615850e-47 |
| Msa0644410 | Msa1117920 | 0.822399 | 2.419162e-53 | -8.615850e-47 |
| Msa0658640 | Msa1117920 | 0.807321 | 5.350809e-50 | -8.615850e-47 |
| Msa0661150 | Msa1117920 | 0.842622 | 2.311355e-58 | -8.615850e-47 |
| Msa0664600 | Msa1117920 | 0.804918 | 1.714942e-49 | -8.615850e-47 |
| Msa0683570 | Msa1117920 | 0.833522 | 5.080374e-56 | -8.615850e-47 |
| Msa0700460 | Msa1117920 | 0.822207 | 2.680052e-53 | -8.615850e-47 |
| Msa0713700 | Msa1117920 | 0.810027 | 1.413937e-50 | -8.615850e-47 |
| Msa0735780 | Msa1117920 | 0.811583 | 6.512081e-51 | -8.615850e-47 |
| Msa0756490 | Msa1117920 | 0.804186 | 2.437665e-49 | -8.615850e-47 |
| Msa0768990 | Msa1117920 | 0.811911 | 5.524676e-51 | -8.615850e-47 |
| Msa0795870 | Msa1117920 | 0.830544 | 2.766363e-55 | -8.615850e-47 |
| Msa0819170 | Msa1117920 | 0.817405 | 3.355349e-52 | -8.615850e-47 |
| Msa0824450 | Msa1117920 | 0.809931 | 1.482321e-50 | -8.615850e-47 |
| Msa0833650 | Msa1117920 | 0.832551 | 8.864283e-56 | -8.615850e-47 |
| Msa0125550 | Msa1117920 | 0.806420 | 8.298915e-50 | -8.615850e-47 |
| Msa0128310 | Msa1117920 | 0.815388 | 9.485845e-52 | -8.615850e-47 |
| Msa0136650 | Msa1117920 | 0.810421 | 1.162377e-50 | -8.615850e-47 |
| Msa0137880 | Msa1117920 | 0.803340 | 3.653144e-49 | -8.615850e-47 |
| Msa0146040 | Msa1117920 | 0.820298 | 7.383626e-53 | -8.615850e-47 |
| Msa0174440 | Msa1117920 | 0.805742 | 1.152719e-49 | -8.615850e-47 |
| Msa0178560 | Msa1117920 | 0.805028 | 1.626509e-49 | -8.615850e-47 |
| Msa0180650 | Msa1117920 | 0.800281 | 1.551111e-48 | -8.615850e-47 |
| Msa0182240 | Msa1117920 | 0.806652 | 7.412583e-50 | -8.615850e-47 |
| Msa0190570 | Msa1117920 | 0.816976 | 4.189712e-52 | -8.615850e-47 |
| Msa0200050 | Msa1117920 | 0.803252 | 3.809077e-49 | -8.615850e-47 |
| Msa0225860 | Msa1117920 | 0.820056 | 8.391431e-53 | -8.615850e-47 |
| Msa0230740 | Msa1117920 | 0.801314 | 9.547491e-49 | -8.615850e-47 |
| Msa0371480 | Msa1117920 | 0.804164 | 2.463642e-49 | -8.615850e-47 |
| Msa0380620 | Msa1117920 | 0.814434 | 1.543516e-51 | -8.615850e-47 |
| Msa0380670 | Msa1117920 | 0.804574 | 2.023500e-49 | -8.615850e-47 |
| Msa0419700 | Msa1117920 | 0.828279 | 9.822090e-55 | -8.615850e-47 |
| Msa0422050 | Msa1117920 | 0.800914 | 1.152443e-48 | -8.615850e-47 |
| Msa0430260 | Msa1117920 | 0.815572 | 8.630289e-52 | -8.615850e-47 |
| Msa0430300 | Msa1117920 | 0.817103 | 3.923216e-52 | -8.615850e-47 |
| Msa0472950 | Msa1117920 | 0.814493 | 1.497864e-51 | -8.615850e-47 |
| Msa0981320 | Msa1117920 | 0.810613 | 1.056809e-50 | -8.615850e-47 |
| Msa1019470 | Msa1117920 | 0.801477 | 8.841078e-49 | -8.615850e-47 |
| Msa1028100 | Msa1117920 | 0.810837 | 9.449963e-51 | -8.615850e-47 |
| Msa1042160 | Msa1117920 | 0.832830 | 7.554280e-56 | -8.615850e-47 |
| Msa1042190 | Msa1117920 | 0.833335 | 5.657064e-56 | -8.615850e-47 |
| Msa1045140 | Msa1117920 | 0.811059 | 8.459858e-51 | -8.615850e-47 |
| Msa1081390 | Msa1117920 | 0.822056 | 2.905708e-53 | -8.615850e-47 |
| Msa0292330 | Msa1117920 | 0.802154 | 6.417317e-49 | -8.615850e-47 |
| Msa0298470 | Msa1117920 | 0.813711 | 2.229310e-51 | -8.615850e-47 |
| Msa0339500 | Msa1117920 | 0.800985 | 1.114684e-48 | -8.615850e-47 |
| Msa0340500 | Msa1117920 | 0.808788 | 2.606718e-50 | -8.615850e-47 |
| Msa1116220 | Msa1117920 | 0.829320 | 5.497675e-55 | -8.615850e-47 |
| Msa1117920 | Msa1132840 | 0.832437 | 9.457466e-56 | -8.615850e-47 |
| Msa1117920 | Msa1140210 | 0.820884 | 5.417199e-53 | -8.615850e-47 |
| Msa1117920 | Msa1161680 | 0.987443 | 2.814260e-170 | -8.615850e-47 |
| Msa1117920 | Msa1167470 | 0.827580 | 1.446153e-54 | -8.615850e-47 |
| Msa1117920 | Msa1186020 | 0.822038 | 2.932426e-53 | -8.615850e-47 |
| Msa1117920 | Msa1215870 | 0.808517 | 2.978935e-50 | -8.615850e-47 |
| Msa1117920 | Msa1223470 | 0.811572 | 6.548195e-51 | -8.615850e-47 |
| Msa1117920 | Msa1224930 | 0.807363 | 5.244019e-50 | -8.615850e-47 |
| Msa1117920 | Msa1226520 | 0.819264 | 1.272238e-52 | -8.615850e-47 |
| Msa1117920 | Msa1240770 | 0.820527 | 6.544916e-53 | -8.615850e-47 |
| Msa1117920 | Msa1282260 | 0.812095 | 5.038145e-51 | -8.615850e-47 |
| Msa1117920 | Msa1321340 | 0.820560 | 6.429704e-53 | -8.615850e-47 |
| Msa1117920 | Msa1343180 | 0.833445 | 5.311984e-56 | -8.615850e-47 |
| Msa1117920 | Msa1359690 | 0.833166 | 6.232738e-56 | -8.615850e-47 |
| Msa1117920 | Msa1372230 | 0.800334 | 1.513210e-48 | -8.615850e-47 |
| Msa1117920 | Msa1396030 | 0.859994 | 2.812847e-63 | -8.615850e-47 |
| Msa1117920 | Msa1437930 | 0.839370 | 1.650209e-57 | -8.615850e-47 |
| Msa1117920 | Msa1440960 | 0.805098 | 1.573016e-49 | -8.615850e-47 |
| Msa1117920 | Msa1452140 | 0.803110 | 4.075343e-49 | -8.615850e-47 |
| Msa1117920 | Msa1454140 | 0.806255 | 8.989280e-50 | -8.615850e-47 |
| Msa1117920 | Msa1465440 | 0.830007 | 3.741558e-55 | -8.615850e-47 |
| Msa0511750 | Msa1117920 | 0.808432 | 3.106328e-50 | -8.615850e-47 |
| Msa0530780 | Msa1117920 | 0.832333 | 1.003681e-55 | -8.615850e-47 |
| Msa0543660 | Msa1117920 | 0.800978 | 1.118085e-48 | -8.615850e-47 |
| Msa0548470 | Msa1117920 | 0.838193 | 3.325355e-57 | -8.615850e-47 |
| Msa0557460 | Msa1117920 | 0.823692 | 1.208109e-53 | -8.615850e-47 |
| Msa0567170 | Msa1117920 | 0.805772 | 1.136049e-49 | -8.615850e-47 |
| Msa0580370 | Msa1117920 | 0.834485 | 2.916161e-56 | -8.615850e-47 |
| Msa0584420 | Msa1117920 | 0.806903 | 6.561223e-50 | -8.615850e-47 |
| Msa0859290 | Msa1117920 | 0.800792 | 1.220783e-48 | -8.615850e-47 |
| Msa0895000 | Msa1117920 | 0.802328 | 5.910239e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117920 | MtrunA17_Chr7g0254901 | 95.252 | 337 | 16 | 0 | 1 | 337 | 1 | 337 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117920 | AT3G56810.1 | 28.340 | 247 | 133 | 5 | 133 | 337 | 88 | 332 | 1.61e-15 | 76.6 |
Find 92 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAGATTGTTAGAGAATT+AGG | 0.198743 | 7_3:+66380449 | Msa1117920:CDS |
| GAAGCAGAGTCTTCTCTTAC+AGG | 0.271350 | 7_3:-66380498 | None:intergenic |
| TGGCGACCGGAGTGACAATT+TGG | 0.295248 | 7_3:-66376804 | None:intergenic |
| TAGACAAATACACAAGTATA+AGG | 0.307460 | 7_3:-66380591 | None:intergenic |
| TCTCTTATGAAAGTGAGTTT+TGG | 0.316516 | 7_3:-66376039 | None:intergenic |
| AATAGAGAGCTTGGAAGAAT+AGG | 0.342378 | 7_3:+66380389 | Msa1117920:CDS |
| AAGAATAGGATTAGCTTTGC+AGG | 0.354347 | 7_3:+66380403 | Msa1117920:CDS |
| CTGTTGATTTCTTCCTCTCC+TGG | 0.358296 | 7_3:-66380227 | None:intergenic |
| GACGTCGACGGAACGAGTTC+AGG | 0.389376 | 7_3:-66376666 | None:intergenic |
| CACCGCCGTTTCCTTACCTT+CGG | 0.406699 | 7_3:+66376198 | Msa1117920:CDS |
| CAAATTACATTGGATTTAGC+TGG | 0.408644 | 7_3:+66380615 | Msa1117920:three_prime_UTR |
| AAGGAAACGGCGGTGGCGAC+GGG | 0.421061 | 7_3:-66376190 | None:intergenic |
| AAAATTCACGTCAAGACAAT+TGG | 0.426627 | 7_3:+66376126 | Msa1117920:CDS |
| TCCGAGGAGTCCGACTTTAC+CGG | 0.432538 | 7_3:+66376440 | Msa1117920:CDS |
| AAGACAATTGGCTGTATGTC+CGG | 0.444181 | 7_3:+66376138 | Msa1117920:CDS |
| TCCGTCGACGTCGCCGGCGG+TGG | 0.446605 | 7_3:+66376677 | Msa1117920:CDS |
| CGGTGTCGCCGTCGTCTTCA+CGG | 0.447900 | 7_3:+66376085 | Msa1117920:CDS |
| ATATTCTCCGATGACTTCCT+TGG | 0.450568 | 7_3:-66376483 | None:intergenic |
| AGTGTGTAGGGATGTTGCTT+GGG | 0.459394 | 7_3:+66380361 | Msa1117920:CDS |
| CAAATTAGCGGTGGCGGTGA+CGG | 0.471037 | 7_3:-66376340 | None:intergenic |
| TAAGGAAACGGCGGTGGCGA+CGG | 0.473448 | 7_3:-66376191 | None:intergenic |
| CTTTGCAGGATTGTATATGC+AGG | 0.473468 | 7_3:+66380417 | Msa1117920:CDS |
| AAGTGTAGATGAAGTGTGTA+GGG | 0.475361 | 7_3:+66380349 | Msa1117920:CDS |
| AACGAAACGAACCGAAGGTA+AGG | 0.480610 | 7_3:-66376209 | None:intergenic |
| CTCTGCTTCTGAACTATACA+TGG | 0.482592 | 7_3:+66380512 | Msa1117920:exon |
| ACACAGGACTCGGCTGTTGT+TGG | 0.485477 | 7_3:-66376746 | None:intergenic |
| GAAGTGTAGATGAAGTGTGT+AGG | 0.487123 | 7_3:+66380348 | Msa1117920:CDS |
| GAGAAGAGACAGAAGCTGCT+TGG | 0.490693 | 7_3:+66376579 | Msa1117920:CDS |
| AGACAAATACACAAGTATAA+GGG | 0.494714 | 7_3:-66380590 | None:intergenic |
| AGTAGCGAGGCTGATGGGAC+TGG | 0.494740 | 7_3:+66376524 | Msa1117920:CDS |
| TGGGGAGAAAATAGAGAGCT+TGG | 0.497438 | 7_3:+66380380 | Msa1117920:CDS |
| ACTCGTTCCGTCGACGTCGC+CGG | 0.499621 | 7_3:+66376671 | Msa1117920:CDS |
| AAGTGTGTAGGGATGTTGCT+TGG | 0.504474 | 7_3:+66380360 | Msa1117920:CDS |
| GTCTTCACCGGAGTCAGTTG+TGG | 0.509279 | 7_3:+66376557 | Msa1117920:CDS |
| ATGAAGATCGTTCAGTTATG+TGG | 0.515586 | 7_3:+66380306 | Msa1117920:CDS |
| CTCTTCTCCACAACTGACTC+CGG | 0.518044 | 7_3:-66376564 | None:intergenic |
| CTTCTCTTACAGGACTCAAA+TGG | 0.520799 | 7_3:-66380488 | None:intergenic |
| GGAAATGAGGTGGAGAATGC+CGG | 0.524845 | 7_3:-66376157 | None:intergenic |
| GCCGGCGGTGGTTAAGCATA+CGG | 0.526954 | 7_3:+66376689 | Msa1117920:CDS |
| GCCGGTAAAGTCGGACTCCT+CGG | 0.530010 | 7_3:-66376441 | None:intergenic |
| GCGTTAGTAGCGAGGCTGAT+GGG | 0.534834 | 7_3:+66376519 | Msa1117920:CDS |
| TGGTGGCAAATTAGCGGTGG+CGG | 0.535065 | 7_3:-66376346 | None:intergenic |
| TTCAGTTATGTGGAGTAGCA+AGG | 0.537258 | 7_3:+66380316 | Msa1117920:CDS |
| AGATTCGCCGTTCGAGTCCA+AGG | 0.544649 | 7_3:+66376466 | Msa1117920:CDS |
| AATTATCACGCGAGGTTCCG+AGG | 0.549305 | 7_3:+66376424 | Msa1117920:CDS |
| TCGAAGACTTACAATGTGAA+TGG | 0.555380 | 7_3:-66376824 | None:intergenic |
| TGATAATTTCGAATTTCGTA+CGG | 0.556195 | 7_3:-66376409 | None:intergenic |
| CTCGAACGGCGAATCTCCGC+CGG | 0.556248 | 7_3:-66376459 | None:intergenic |
| ACAACTGACTCCGGTGAAGA+CGG | 0.558552 | 7_3:-66376555 | None:intergenic |
| GGAATCGCTTCCGTCTTCAC+CGG | 0.560395 | 7_3:+66376545 | Msa1117920:CDS |
| ATTTGTCTAACAAATTACAT+TGG | 0.560698 | 7_3:+66380605 | Msa1117920:three_prime_UTR |
| CAGCAGTTACTGAAGAAGCC+AGG | 0.563875 | 7_3:+66380209 | Msa1117920:CDS |
| TTTGCAGGATTGTATATGCA+GGG | 0.564322 | 7_3:+66380418 | Msa1117920:CDS |
| CTCAGTCCAAATTGTCACTC+CGG | 0.564508 | 7_3:+66376798 | Msa1117920:CDS |
| CGAAGGTAAGGAAACGGCGG+TGG | 0.570537 | 7_3:-66376197 | None:intergenic |
| GTGAAGTGTTCGGTGGTTAA+CGG | 0.571904 | 7_3:+66376720 | Msa1117920:CDS |
| ACCGTATGCTTAACCACCGC+CGG | 0.573875 | 7_3:-66376690 | None:intergenic |
| CGAATCTCCGCCGGTAAAGT+CGG | 0.575052 | 7_3:-66376450 | None:intergenic |
| ATTAGCGGTGGCGGTGACGG+TGG | 0.575627 | 7_3:-66376337 | None:intergenic |
| ACCACCGCCGGCGACGTCGA+CGG | 0.576349 | 7_3:-66376678 | None:intergenic |
| CGAGAGAATGACAAACGAGT+TGG | 0.576947 | 7_3:+66380265 | Msa1117920:CDS |
| TGGTGTAATAAAGAGTATAA+CGG | 0.579233 | 7_3:-66376009 | None:intergenic |
| GTGGCGACGGGAATGAGAAG+TGG | 0.589471 | 7_3:-66376178 | None:intergenic |
| TTCTGGTGGCAAATTAGCGG+TGG | 0.590543 | 7_3:-66376349 | None:intergenic |
| GGGAATGAGAAGTGGAAATG+AGG | 0.592567 | 7_3:-66376170 | None:intergenic |
| GAGATGCGACGAGGATCTCA+AGG | 0.595528 | 7_3:+66376611 | Msa1117920:CDS |
| GGTTTGTGAGGTGAAGTGTT+CGG | 0.599032 | 7_3:+66376710 | Msa1117920:CDS |
| AATGAGAAGTGGAAATGAGG+TGG | 0.606615 | 7_3:-66376167 | None:intergenic |
| ACGAACCGAAGGTAAGGAAA+CGG | 0.606713 | 7_3:-66376203 | None:intergenic |
| ATCAGCCTCGCTACTAACGC+TGG | 0.612829 | 7_3:-66376516 | None:intergenic |
| TCAAGAACAGACACAGGACT+CGG | 0.613130 | 7_3:-66376756 | None:intergenic |
| TCAGTTATGTGGAGTAGCAA+GGG | 0.613803 | 7_3:+66380317 | Msa1117920:CDS |
| TTCGAGTCCAAGGAAGTCAT+CGG | 0.619932 | 7_3:+66376476 | Msa1117920:CDS |
| CTTACAATGTGAATGGCGAC+CGG | 0.622655 | 7_3:-66376817 | None:intergenic |
| AGCGTTAGTAGCGAGGCTGA+TGG | 0.630450 | 7_3:+66376518 | Msa1117920:CDS |
| AAACACCAGCGTTAGTAGCG+AGG | 0.630494 | 7_3:+66376511 | Msa1117920:CDS |
| GGTTAAGCATACGGTTTGTG+AGG | 0.632063 | 7_3:+66376698 | Msa1117920:CDS |
| CGTTCCGTCGACGTCGCCGG+CGG | 0.638784 | 7_3:+66376674 | Msa1117920:CDS |
| GTGTGTAGGGATGTTGCTTG+GGG | 0.646863 | 7_3:+66380362 | Msa1117920:CDS |
| GTTACTGAAGAAGCCAGGAG+AGG | 0.659127 | 7_3:+66380214 | Msa1117920:CDS |
| TTGTGAGGTGAAGTGTTCGG+TGG | 0.659789 | 7_3:+66376713 | Msa1117920:CDS |
| AAATTCGAAATTATCACGCG+AGG | 0.662168 | 7_3:+66376416 | Msa1117920:CDS |
| GTTTCTCGCCGTGAAGACGA+CGG | 0.662502 | 7_3:-66376093 | None:intergenic |
| ATGACTTCCTTGGACTCGAA+CGG | 0.668743 | 7_3:-66376473 | None:intergenic |
| AAGTCGTCAAGAACAGACAC+AGG | 0.683064 | 7_3:-66376762 | None:intergenic |
| TTCACGGCGAGAAACGACGC+CGG | 0.686409 | 7_3:+66376101 | Msa1117920:CDS |
| GAGTGACAATTTGGACTGAG+TGG | 0.688078 | 7_3:-66376795 | None:intergenic |
| GAGGAGTCCGACTTTACCGG+CGG | 0.703444 | 7_3:+66376443 | Msa1117920:CDS |
| AGAAAATCATAGATTCAGTG+AGG | 0.716140 | 7_3:+66376640 | Msa1117920:CDS |
| AGCGTTGCAGAGATGCGACG+AGG | 0.722914 | 7_3:+66376602 | Msa1117920:CDS |
| AACCGAAGGTAAGGAAACGG+CGG | 0.755169 | 7_3:-66376200 | None:intergenic |
| AATGAAGAGACAAAGCAGCG+CGG | 0.779162 | 7_3:+66376065 | Msa1117920:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGAAAAAAGAAAAA+GGG | + | chr7_3:66378329-66378348 | Msa1117920:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr7_3:66378523-66378542 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr7_3:66378524-66378543 | None:intergenic | 10.0% |
| !! | TAATATAAACTAATAAATCA+TGG | + | chr7_3:66378852-66378871 | Msa1117920:intron | 10.0% |
| !!! | TTTTACTTAAATAAAAGTAA+TGG | - | chr7_3:66379290-66379309 | None:intergenic | 10.0% |
| !!! | ATTTGTGTTTTTTTTTTATT+TGG | + | chr7_3:66379491-66379510 | Msa1117920:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:66377443-66377462 | Msa1117920:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:66377443-66377462 | Msa1117920:intron | 100.0% |
| !!! | ATTCAATCATTCAATATTTT+AGG | - | chr7_3:66377016-66377035 | None:intergenic | 15.0% |
| !! | AATTCAAAAAAGAAAAATAC+TGG | - | chr7_3:66377377-66377396 | None:intergenic | 15.0% |
| !! | ATTAATCCAAAACATAAAAA+GGG | - | chr7_3:66377482-66377501 | None:intergenic | 15.0% |
| !! | AATTAATCCAAAACATAAAA+AGG | - | chr7_3:66377483-66377502 | None:intergenic | 15.0% |
| !!! | TTGTGTATATTTTAAATGTT+GGG | - | chr7_3:66377703-66377722 | None:intergenic | 15.0% |
| !!! | ATTGTGTATATTTTAAATGT+TGG | - | chr7_3:66377704-66377723 | None:intergenic | 15.0% |
| !!! | AGAAGTTATGATTTAAAATT+TGG | - | chr7_3:66377903-66377922 | None:intergenic | 15.0% |
| !! | AAATTAATCACTGTTAAATT+AGG | - | chr7_3:66378000-66378019 | None:intergenic | 15.0% |
| !! | AAATTAATCATAGTTGAATT+AGG | - | chr7_3:66378067-66378086 | None:intergenic | 15.0% |
| !!! | TTTTTGTAGTAATAATAGTT+GGG | - | chr7_3:66378096-66378115 | None:intergenic | 15.0% |
| !!! | ATTTTTGTAGTAATAATAGT+TGG | - | chr7_3:66378097-66378116 | None:intergenic | 15.0% |
| !! | AAATCAATTATACATTCAAT+TGG | - | chr7_3:66378182-66378201 | None:intergenic | 15.0% |
| !! | TGTTAATAAAATTGAATAGA+CGG | - | chr7_3:66378282-66378301 | None:intergenic | 15.0% |
| !! | CAAAAAAAGAAAAAAGAAAA+AGG | + | chr7_3:66378328-66378347 | Msa1117920:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr7_3:66378522-66378541 | None:intergenic | 15.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | + | chr7_3:66378559-66378578 | Msa1117920:intron | 15.0% |
| !!! | AGTTTATATTATTATCGTTT+TGG | - | chr7_3:66378843-66378862 | None:intergenic | 15.0% |
| !! | GAGAAAAAATTTATAATGTA+GGG | + | chr7_3:66379439-66379458 | Msa1117920:intron | 15.0% |
| !! | TTAATTATAAGAGAATCAAT+TGG | + | chr7_3:66379874-66379893 | Msa1117920:intron | 15.0% |
| !! | TAATTATAAGAGAATCAATT+GGG | + | chr7_3:66379875-66379894 | Msa1117920:intron | 15.0% |
| !!! | TCGTCTTGTTTTTTTTTTTT+TGG | + | chr7_3:66377330-66377349 | Msa1117920:intron | 20.0% |
| !!! | ATTGCTTCCTAATTTTATTT+TGG | + | chr7_3:66377500-66377519 | Msa1117920:intron | 20.0% |
| !! | ATGTACTCCAAAATAAAATT+AGG | - | chr7_3:66377510-66377529 | None:intergenic | 20.0% |
| !! | ACTAAAATGCATGTAATTAT+CGG | - | chr7_3:66377616-66377635 | None:intergenic | 20.0% |
| !!! | TCCATTTTTCCATTTTTTTT+AGG | + | chr7_3:66377874-66377893 | Msa1117920:intron | 20.0% |
| !! | TCCTAAAAAAAATGGAAAAA+TGG | - | chr7_3:66377878-66377897 | None:intergenic | 20.0% |
| !!! | CACAGACAATTATAAAATTT+TGG | + | chr7_3:66378206-66378225 | Msa1117920:intron | 20.0% |
| !! | TATTAACATATCATGATTAG+TGG | + | chr7_3:66378294-66378313 | Msa1117920:intron | 20.0% |
| !!! | CTTTTTTTTAGAAAATGAGT+CGG | - | chr7_3:66378385-66378404 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr7_3:66378499-66378518 | None:intergenic | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | + | chr7_3:66378558-66378577 | Msa1117920:intron | 20.0% |
| !! | TTTCTTATAGTACAAAATAG+TGG | - | chr7_3:66378901-66378920 | None:intergenic | 20.0% |
| !!! | ACTATTTTGTACTATAAGAA+AGG | + | chr7_3:66378900-66378919 | Msa1117920:intron | 20.0% |
| !! | TCTCTTATTGTGTTTATATA+AGG | + | chr7_3:66379205-66379224 | Msa1117920:intron | 20.0% |
| !! | GGAGAAAAAATTTATAATGT+AGG | + | chr7_3:66379438-66379457 | Msa1117920:intron | 20.0% |
| !! | AAAATTTATAATGTAGGGAA+AGG | + | chr7_3:66379444-66379463 | Msa1117920:intron | 20.0% |
| !! | AAATTTATAATGTAGGGAAA+GGG | + | chr7_3:66379445-66379464 | Msa1117920:intron | 20.0% |
| !!! | GGTAGTGTATATATATTTTT+TGG | + | chr7_3:66379512-66379531 | Msa1117920:intron | 20.0% |
| !!! | GTTTTAACATTCAAATTTCT+AGG | - | chr7_3:66379990-66380009 | None:intergenic | 20.0% |
| !! | AAACAAATGTCTATATAACA+TGG | + | chr7_3:66380036-66380055 | Msa1117920:intron | 20.0% |
| !! | AAAATAAAACTGATGTCTAA+TGG | + | chr7_3:66380149-66380168 | Msa1117920:intron | 20.0% |
| !! | ATTTGTCTAACAAATTACAT+TGG | + | chr7_3:66380605-66380624 | Msa1117920:three_prime_UTR | 20.0% |
| ! | TGATAATTTCGAATTTCGTA+CGG | - | chr7_3:66376412-66376431 | None:intergenic | 25.0% |
| ! | AGTGTTTATGTTTGATATCA+CGG | + | chr7_3:66376915-66376934 | Msa1117920:intron | 25.0% |
| ! | AAATCATGCAATTTACACAT+TGG | - | chr7_3:66377055-66377074 | None:intergenic | 25.0% |
| !!! | TGATTTTAACATACTTTGCA+TGG | + | chr7_3:66377069-66377088 | Msa1117920:intron | 25.0% |
| !!! | AGTTTTATGTTTTACTAGCA+AGG | + | chr7_3:66377148-66377167 | Msa1117920:intron | 25.0% |
| ! | GATGATAGATCATTAGAAAA+AGG | + | chr7_3:66377242-66377261 | Msa1117920:intron | 25.0% |
| ! | GATGAACTGATTAACTATTT+AGG | + | chr7_3:66377298-66377317 | Msa1117920:intron | 25.0% |
| ! | TCAAAAAAGAAAAATACTGG+TGG | - | chr7_3:66377374-66377393 | None:intergenic | 25.0% |
| !!! | TTGAATTTGCTTTAAGAGTT+AGG | + | chr7_3:66377390-66377409 | Msa1117920:intron | 25.0% |
| !! | TAAACTCCCTTTTTATGTTT+TGG | + | chr7_3:66377473-66377492 | Msa1117920:intron | 25.0% |
| ! | GGAGTACATAATTGAATAAA+TGG | + | chr7_3:66377521-66377540 | Msa1117920:intron | 25.0% |
| !!! | AGTTGTTAGATTAAGTTGAA+TGG | + | chr7_3:66377633-66377652 | Msa1117920:intron | 25.0% |
| !!! | GATTGTAAATGCTTTTTCAT+AGG | - | chr7_3:66377751-66377770 | None:intergenic | 25.0% |
| ! | ATGTATATGAATTTCCTTAC+AGG | + | chr7_3:66377810-66377829 | Msa1117920:intron | 25.0% |
| ! | AAAAATGGAAAAATGGATAG+AGG | - | chr7_3:66377871-66377890 | None:intergenic | 25.0% |
| ! | ATTTGGCATCCTAAAAAAAA+TGG | - | chr7_3:66377886-66377905 | None:intergenic | 25.0% |
| ! | GTTAATCACATGTAAAATTG+TGG | + | chr7_3:66378151-66378170 | Msa1117920:intron | 25.0% |
| ! | CAATTCAAGGTCAAAATTTA+TGG | - | chr7_3:66378253-66378272 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr7_3:66378411-66378430 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr7_3:66378412-66378431 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr7_3:66378500-66378519 | None:intergenic | 25.0% |
| ! | ACTAATAAATCATGGTACTT+TGG | + | chr7_3:66378860-66378879 | Msa1117920:intron | 25.0% |
| ! | AAAGATGTTTCAAAAGGAAA+AGG | + | chr7_3:66378966-66378985 | Msa1117920:intron | 25.0% |
| ! | GAAACAGTTTATCATTATTG+AGG | + | chr7_3:66379227-66379246 | Msa1117920:intron | 25.0% |
| ! | TCAATACCAAAATTAGTTGT+TGG | + | chr7_3:66379340-66379359 | Msa1117920:intron | 25.0% |
| ! | CAATACCAAAATTAGTTGTT+GGG | + | chr7_3:66379341-66379360 | Msa1117920:intron | 25.0% |
| ! | ATATTCAACCTAAGTCTATT+TGG | + | chr7_3:66379406-66379425 | Msa1117920:intron | 25.0% |
| !!! | ATAGCTTTGAACCATATTTT+TGG | - | chr7_3:66379656-66379675 | None:intergenic | 25.0% |
| ! | AAAAATATGGTTCAAAGCTA+TGG | + | chr7_3:66379655-66379674 | Msa1117920:intron | 25.0% |
| !! | CATTCAAATTTCTAGGAAAA+TGG | - | chr7_3:66379983-66380002 | None:intergenic | 25.0% |
| ! | AGACAAATACACAAGTATAA+GGG | - | chr7_3:66380593-66380612 | None:intergenic | 25.0% |
| ! | TAGACAAATACACAAGTATA+AGG | - | chr7_3:66380594-66380613 | None:intergenic | 25.0% |
| ! | TCTCTTATGAAAGTGAGTTT+TGG | - | chr7_3:66376042-66376061 | None:intergenic | 30.0% |
| AAAATTCACGTCAAGACAAT+TGG | + | chr7_3:66376126-66376145 | Msa1117920:CDS | 30.0% | |
| CCTGAAAATGAGAACAAAAA+AGG | - | chr7_3:66376291-66376310 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTGTTCTCATTTTC+AGG | + | chr7_3:66376288-66376307 | Msa1117920:intron | 30.0% |
| !!! | TTCTTCTCATTCGTTTTTTC+TGG | - | chr7_3:66376369-66376388 | None:intergenic | 30.0% |
| AGAAAATCATAGATTCAGTG+AGG | + | chr7_3:66376640-66376659 | Msa1117920:CDS | 30.0% | |
| ! | CCGTGATTTTGCAAAAATTA+GGG | - | chr7_3:66376964-66376983 | None:intergenic | 30.0% |
| ! | CCCTAATTTTTGCAAAATCA+CGG | + | chr7_3:66376961-66376980 | Msa1117920:intron | 30.0% |
| ! | ACCGTGATTTTGCAAAAATT+AGG | - | chr7_3:66376965-66376984 | None:intergenic | 30.0% |
| ! | TAATTTTTGCAAAATCACGG+TGG | + | chr7_3:66376964-66376983 | Msa1117920:intron | 30.0% |
| ATCATAGTTGAATTAGGTTC+TGG | - | chr7_3:66378061-66378080 | None:intergenic | 30.0% | |
| TAGTAATAATAGTTGGGAAG+AGG | - | chr7_3:66378090-66378109 | None:intergenic | 30.0% | |
| ! | GTGATTAACCAGATGTTTTA+GGG | - | chr7_3:66378140-66378159 | None:intergenic | 30.0% |
| ! | TGTGATTAACCAGATGTTTT+AGG | - | chr7_3:66378141-66378160 | None:intergenic | 30.0% |
| TAGACGGTTAATTCAATTCA+AGG | - | chr7_3:66378266-66378285 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr7_3:66378515-66378534 | None:intergenic | 30.0% | |
| AATTCCGGTTCTATAGTATA+GGG | - | chr7_3:66378609-66378628 | None:intergenic | 30.0% | |
| TAATTCCGGTTCTATAGTAT+AGG | - | chr7_3:66378610-66378629 | None:intergenic | 30.0% | |
| ! | AGTTAGCTTCTCTTTAATTC+CGG | - | chr7_3:66378624-66378643 | None:intergenic | 30.0% |
| AATAAATCATGGTACTTTGG+TGG | + | chr7_3:66378863-66378882 | Msa1117920:intron | 30.0% | |
| CAGTCAAAAGATGTTTCAAA+AGG | + | chr7_3:66378960-66378979 | Msa1117920:intron | 30.0% | |
| ATGTTTCAAAAGGAAAAGGA+GGG | + | chr7_3:66378970-66378989 | Msa1117920:intron | 30.0% | |
| ! | AATTTTCTGTACACCATTGT+TGG | - | chr7_3:66379380-66379399 | None:intergenic | 30.0% |
| ! | TTTGTGTTTAGTTCAACTAG+AGG | + | chr7_3:66379546-66379565 | Msa1117920:intron | 30.0% |
| ! | TTTTCACTCGAGCTAAAATT+AGG | + | chr7_3:66379610-66379629 | Msa1117920:intron | 30.0% |
| !!! | CTTTGAACCATATTTTTGGT+CGG | - | chr7_3:66379652-66379671 | None:intergenic | 30.0% |
| TTCAGTCAAGATTTGAACTT+AGG | - | chr7_3:66379905-66379924 | None:intergenic | 30.0% | |
| AATTGAGCTCTTAATTGCTA+GGG | + | chr7_3:66379953-66379972 | Msa1117920:intron | 30.0% | |
| ! | AAAGTGTTATAAGCTAGAAG+TGG | - | chr7_3:66380114-66380133 | None:intergenic | 30.0% |
| GAAGAGATTGTTAGAGAATT+AGG | + | chr7_3:66380449-66380468 | Msa1117920:CDS | 30.0% | |
| CAAATTACATTGGATTTAGC+TGG | + | chr7_3:66380615-66380634 | Msa1117920:three_prime_UTR | 30.0% | |
| !! | CTTATGAAAGTGAGTTTTGG+TGG | - | chr7_3:66376039-66376058 | None:intergenic | 35.0% |
| !! | TTTTTCTGGTGGCAAATTAG+CGG | - | chr7_3:66376355-66376374 | None:intergenic | 35.0% |
| !!! | TTCTCATTCGTTTTTTCTGG+TGG | - | chr7_3:66376366-66376385 | None:intergenic | 35.0% |
| AAATTCGAAATTATCACGCG+AGG | + | chr7_3:66376416-66376435 | Msa1117920:CDS | 35.0% | |
| TCGAAGACTTACAATGTGAA+TGG | - | chr7_3:66376827-66376846 | None:intergenic | 35.0% | |
| ACATAAACACTGACGCTAAT+TGG | - | chr7_3:66376906-66376925 | None:intergenic | 35.0% | |
| ! | AGGAACAGAGTTTACGTTTT+AGG | + | chr7_3:66377168-66377187 | Msa1117920:intron | 35.0% |
| AAGTTGACATGTACTACTCT+TGG | + | chr7_3:66377579-66377598 | Msa1117920:intron | 35.0% | |
| AGTTGACATGTACTACTCTT+GGG | + | chr7_3:66377580-66377599 | Msa1117920:intron | 35.0% | |
| AAATCATTGTGTCTCCTGTA+AGG | - | chr7_3:66377827-66377846 | None:intergenic | 35.0% | |
| TCTTCTATTCCACAACATCA+TGG | + | chr7_3:66377920-66377939 | Msa1117920:intron | 35.0% | |
| AAGATGATTGCATAACCAAC+AGG | - | chr7_3:66377974-66377993 | None:intergenic | 35.0% | |
| TTCTGGATGAATGAGCTAAA+GGG | - | chr7_3:66378044-66378063 | None:intergenic | 35.0% | |
| !!! | CAGATGTTTTAGGGAAAAAC+GGG | - | chr7_3:66378131-66378150 | None:intergenic | 35.0% |
| !!! | CCAGATGTTTTAGGGAAAAA+CGG | - | chr7_3:66378132-66378151 | None:intergenic | 35.0% |
| AGAAAATGAGTCGGTTATTC+CGG | - | chr7_3:66378376-66378395 | None:intergenic | 35.0% | |
| TGTCAATTAAATTGGGACTG+AGG | + | chr7_3:66378566-66378585 | Msa1117920:intron | 35.0% | |
| GTTTCCCTATACTATAGAAC+CGG | + | chr7_3:66378602-66378621 | Msa1117920:intron | 35.0% | |
| ! | TAACTAATGACCGTTTTGCT+GGG | + | chr7_3:66378639-66378658 | Msa1117920:intron | 35.0% |
| ATGTAATGGTATGGTGACAT+TGG | - | chr7_3:66378690-66378709 | None:intergenic | 35.0% | |
| CATAATTCATAGCTAGCATG+AGG | - | chr7_3:66378932-66378951 | None:intergenic | 35.0% | |
| GATGTTTCAAAAGGAAAAGG+AGG | + | chr7_3:66378969-66378988 | Msa1117920:intron | 35.0% | |
| GCAGGTAATAAAGTTCCAAA+GGG | - | chr7_3:66379017-66379036 | None:intergenic | 35.0% | |
| ! | AAACAAGGCTCTTGTTTGTT+GGG | - | chr7_3:66379111-66379130 | None:intergenic | 35.0% |
| TACCAAAATTAGTTGTTGGG+TGG | + | chr7_3:66379344-66379363 | Msa1117920:intron | 35.0% | |
| ACCAAAATTAGTTGTTGGGT+GGG | + | chr7_3:66379345-66379364 | Msa1117920:intron | 35.0% | |
| ! | CCTAAGTCTATTTGGTTCAA+CGG | + | chr7_3:66379414-66379433 | Msa1117920:intron | 35.0% |
| TAATGTAGGGAAAGGGAAAA+AGG | + | chr7_3:66379452-66379471 | Msa1117920:intron | 35.0% | |
| AATGTAGGGAAAGGGAAAAA+GGG | + | chr7_3:66379453-66379472 | Msa1117920:intron | 35.0% | |
| CGAGCTAAAATTAGGTTACA+TGG | + | chr7_3:66379618-66379637 | Msa1117920:intron | 35.0% | |
| TTACCTTCCGACCAAAAATA+TGG | + | chr7_3:66379642-66379661 | Msa1117920:intron | 35.0% | |
| ATATGGTTCAAAGCTATGGA+TGG | + | chr7_3:66379659-66379678 | Msa1117920:intron | 35.0% | |
| CTATGGATGGAATACCATAA+GGG | + | chr7_3:66379672-66379691 | Msa1117920:intron | 35.0% | |
| ACTAAGTGATTGAACTCAAG+TGG | + | chr7_3:66379841-66379860 | Msa1117920:intron | 35.0% | |
| GTTCAAATCTTGACTGAAGT+TGG | + | chr7_3:66379907-66379926 | Msa1117920:intron | 35.0% | |
| CAATTGAGCTCTTAATTGCT+AGG | + | chr7_3:66379952-66379971 | Msa1117920:intron | 35.0% | |
| TGTTATAAGCTAGAAGTGGA+AGG | - | chr7_3:66380110-66380129 | None:intergenic | 35.0% | |
| ATGAAGATCGTTCAGTTATG+TGG | + | chr7_3:66380306-66380325 | Msa1117920:CDS | 35.0% | |
| AAGTGTAGATGAAGTGTGTA+GGG | + | chr7_3:66380349-66380368 | Msa1117920:CDS | 35.0% | |
| AATAGAGAGCTTGGAAGAAT+AGG | + | chr7_3:66380389-66380408 | Msa1117920:CDS | 35.0% | |
| !! | AAGAATAGGATTAGCTTTGC+AGG | + | chr7_3:66380403-66380422 | Msa1117920:CDS | 35.0% |
| TTTGCAGGATTGTATATGCA+GGG | + | chr7_3:66380418-66380437 | Msa1117920:CDS | 35.0% | |
| ! | GTCTTGACGTGAATTTTGTC+CGG | - | chr7_3:66376123-66376142 | None:intergenic | 40.0% |
| AAGACAATTGGCTGTATGTC+CGG | + | chr7_3:66376138-66376157 | Msa1117920:CDS | 40.0% | |
| AATGAGAAGTGGAAATGAGG+TGG | - | chr7_3:66376170-66376189 | None:intergenic | 40.0% | |
| ATATTCTCCGATGACTTCCT+TGG | - | chr7_3:66376486-66376505 | None:intergenic | 40.0% | |
| ACGGTGAGTTTATTGAGATC+AGG | + | chr7_3:66376934-66376953 | Msa1117920:intron | 40.0% | |
| TAGGTGCGTGTTTAGTGTTA+AGG | - | chr7_3:66376997-66377016 | None:intergenic | 40.0% | |
| ! | ACTAAAAGTGTGTGTGTGTG+TGG | + | chr7_3:66377422-66377441 | Msa1117920:intron | 40.0% |
| ! | CTAAAAGTGTGTGTGTGTGT+GGG | + | chr7_3:66377423-66377442 | Msa1117920:intron | 40.0% |
| ! | TAAAAGTGTGTGTGTGTGTG+GGG | + | chr7_3:66377424-66377443 | Msa1117920:intron | 40.0% |
| CATGTACTACTCTTGGGATT+TGG | + | chr7_3:66377586-66377605 | Msa1117920:intron | 40.0% | |
| ATATGATGGCCATGATGTTG+TGG | - | chr7_3:66377932-66377951 | None:intergenic | 40.0% | |
| ACATCATGGCCATCATATAG+TGG | + | chr7_3:66377934-66377953 | Msa1117920:intron | 40.0% | |
| AGTTGTCTGCCACTATATGA+TGG | - | chr7_3:66377946-66377965 | None:intergenic | 40.0% | |
| GCAGACAACTTAATTCCTGT+TGG | + | chr7_3:66377956-66377975 | Msa1117920:intron | 40.0% | |
| TCTGGATGAATGAGCTAAAG+GGG | - | chr7_3:66378043-66378062 | None:intergenic | 40.0% | |
| ! | GTTCTGGATGAATGAGCTAA+AGG | - | chr7_3:66378045-66378064 | None:intergenic | 40.0% |
| !! | CCGTTTTTCCCTAAAACATC+TGG | + | chr7_3:66378129-66378148 | Msa1117920:intron | 40.0% |
| GAAAATGAGTCGGTTATTCC+GGG | - | chr7_3:66378375-66378394 | None:intergenic | 40.0% | |
| ! | CTAACTAATGACCGTTTTGC+TGG | + | chr7_3:66378638-66378657 | Msa1117920:intron | 40.0% |
| !! | AACCACTTTGGTGCCATTAA+TGG | + | chr7_3:66378662-66378681 | Msa1117920:intron | 40.0% |
| TGACTTAGCTTACGTGACAT+TGG | - | chr7_3:66378791-66378810 | None:intergenic | 40.0% | |
| AATCATGGTACTTTGGTGGA+TGG | + | chr7_3:66378867-66378886 | Msa1117920:intron | 40.0% | |
| AAGAAATACACACCACCCTT+TGG | + | chr7_3:66378999-66379018 | Msa1117920:intron | 40.0% | |
| GGTAATAAAGTTCCAAAGGG+TGG | - | chr7_3:66379014-66379033 | None:intergenic | 40.0% | |
| GGCAGGTAATAAAGTTCCAA+AGG | - | chr7_3:66379018-66379037 | None:intergenic | 40.0% | |
| !!! | ATGCAGAAACGCACTTTTTC+AGG | + | chr7_3:66379045-66379064 | Msa1117920:intron | 40.0% |
| !!! | TGCAGAAACGCACTTTTTCA+GGG | + | chr7_3:66379046-66379065 | Msa1117920:intron | 40.0% |
| ! | CAAACAAGGCTCTTGTTTGT+TGG | - | chr7_3:66379112-66379131 | None:intergenic | 40.0% |
| ! | ACCCACCCAACAACTAATTT+TGG | - | chr7_3:66379349-66379368 | None:intergenic | 40.0% |
| CCGTTGAACCAAATAGACTT+AGG | - | chr7_3:66379417-66379436 | None:intergenic | 40.0% | |
| ! | AAGTCTATTTGGTTCAACGG+AGG | + | chr7_3:66379417-66379436 | Msa1117920:intron | 40.0% |
| ! | GTTTAGTTCAACTAGAGGAG+TGG | + | chr7_3:66379551-66379570 | Msa1117920:intron | 40.0% |
| !!! | GAACCATATTTTTGGTCGGA+AGG | - | chr7_3:66379648-66379667 | None:intergenic | 40.0% |
| GCTATGGATGGAATACCATA+AGG | + | chr7_3:66379671-66379690 | Msa1117920:intron | 40.0% | |
| TTCAGTTATGTGGAGTAGCA+AGG | + | chr7_3:66380316-66380335 | Msa1117920:CDS | 40.0% | |
| TCAGTTATGTGGAGTAGCAA+GGG | + | chr7_3:66380317-66380336 | Msa1117920:CDS | 40.0% | |
| GAAGTGTAGATGAAGTGTGT+AGG | + | chr7_3:66380348-66380367 | Msa1117920:CDS | 40.0% | |
| CTTTGCAGGATTGTATATGC+AGG | + | chr7_3:66380417-66380436 | Msa1117920:CDS | 40.0% | |
| CTTCTCTTACAGGACTCAAA+TGG | - | chr7_3:66380491-66380510 | None:intergenic | 40.0% | |
| CTCTGCTTCTGAACTATACA+TGG | + | chr7_3:66380512-66380531 | Msa1117920:exon | 40.0% | |
| !!! | AAGTGAGTTTTGGTGGTGAG+TGG | - | chr7_3:66376032-66376051 | None:intergenic | 45.0% |
| AATGAAGAGACAAAGCAGCG+CGG | + | chr7_3:66376065-66376084 | Msa1117920:exon | 45.0% | |
| GGGAATGAGAAGTGGAAATG+AGG | - | chr7_3:66376173-66376192 | None:intergenic | 45.0% | |
| ACGAACCGAAGGTAAGGAAA+CGG | - | chr7_3:66376206-66376225 | None:intergenic | 45.0% | |
| AACGAAACGAACCGAAGGTA+AGG | - | chr7_3:66376212-66376231 | None:intergenic | 45.0% | |
| AACGAAACGAAACGAACCGA+AGG | - | chr7_3:66376217-66376236 | None:intergenic | 45.0% | |
| ATGACTTCCTTGGACTCGAA+CGG | - | chr7_3:66376476-66376495 | None:intergenic | 45.0% | |
| TTCGAGTCCAAGGAAGTCAT+CGG | + | chr7_3:66376476-66376495 | Msa1117920:CDS | 45.0% | |
| GGTTAAGCATACGGTTTGTG+AGG | + | chr7_3:66376698-66376717 | Msa1117920:CDS | 45.0% | |
| ! | GGTTTGTGAGGTGAAGTGTT+CGG | + | chr7_3:66376710-66376729 | Msa1117920:CDS | 45.0% |
| ! | GTGAAGTGTTCGGTGGTTAA+CGG | + | chr7_3:66376720-66376739 | Msa1117920:CDS | 45.0% |
| TCAAGAACAGACACAGGACT+CGG | - | chr7_3:66376759-66376778 | None:intergenic | 45.0% | |
| AAGTCGTCAAGAACAGACAC+AGG | - | chr7_3:66376765-66376784 | None:intergenic | 45.0% | |
| GAGTGACAATTTGGACTGAG+TGG | - | chr7_3:66376798-66376817 | None:intergenic | 45.0% | |
| CTCAGTCCAAATTGTCACTC+CGG | + | chr7_3:66376798-66376817 | Msa1117920:CDS | 45.0% | |
| CTTACAATGTGAATGGCGAC+CGG | - | chr7_3:66376820-66376839 | None:intergenic | 45.0% | |
| GCGTGTTTAGTGTTAAGGCA+CGG | - | chr7_3:66376992-66377011 | None:intergenic | 45.0% | |
| ! | AAAAGTGTGTGTGTGTGTGG+GGG | + | chr7_3:66377425-66377444 | Msa1117920:intron | 45.0% |
| CAAAGTGGTTCCCAGCAAAA+CGG | - | chr7_3:66378652-66378671 | None:intergenic | 45.0% | |
| TGCCATTAATGGCACCAAAG+TGG | - | chr7_3:66378667-66378686 | None:intergenic | 45.0% | |
| !! | GGTGACATTGGTGCCATTAA+TGG | - | chr7_3:66378678-66378697 | None:intergenic | 45.0% |
| ! | GTGGTGGAGATGTAATGGTA+TGG | - | chr7_3:66378699-66378718 | None:intergenic | 45.0% |
| ! | TGTGTGTGGTGGAGATGTAA+TGG | - | chr7_3:66378704-66378723 | None:intergenic | 45.0% |
| TGATGTGTGTGGATGTGTGT+GGG | - | chr7_3:66378744-66378763 | None:intergenic | 45.0% | |
| TTGATGTGTGTGGATGTGTG+TGG | - | chr7_3:66378745-66378764 | None:intergenic | 45.0% | |
| CACACATCCACACACATCAA+CGG | + | chr7_3:66378745-66378764 | Msa1117920:intron | 45.0% | |
| ! | AACGGCCAAGATTTTCCCAA+TGG | + | chr7_3:66378763-66378782 | Msa1117920:intron | 45.0% |
| !! | TGGTGCCATTGGGAAAATCT+TGG | - | chr7_3:66378771-66378790 | None:intergenic | 45.0% |
| !! | TACGTGACATTGGTGCCATT+GGG | - | chr7_3:66378781-66378800 | None:intergenic | 45.0% |
| !! | TTACGTGACATTGGTGCCAT+TGG | - | chr7_3:66378782-66378801 | None:intergenic | 45.0% |
| ! | TTTTGGACCAGAGCAAAACG+GGG | - | chr7_3:66378826-66378845 | None:intergenic | 45.0% |
| !! | GTTTTGGACCAGAGCAAAAC+GGG | - | chr7_3:66378827-66378846 | None:intergenic | 45.0% |
| !! | CGTTTTGGACCAGAGCAAAA+CGG | - | chr7_3:66378828-66378847 | None:intergenic | 45.0% |
| ! | GTACTTTGGTGGATGGATCT+TGG | + | chr7_3:66378874-66378893 | Msa1117920:intron | 45.0% |
| AGTGCGTTTCTGCATGACTA+GGG | - | chr7_3:66379040-66379059 | None:intergenic | 45.0% | |
| AAGTGCGTTTCTGCATGACT+AGG | - | chr7_3:66379041-66379060 | None:intergenic | 45.0% | |
| TGCAGGTTAATTCATGCGTG+TGG | + | chr7_3:66379160-66379179 | Msa1117920:intron | 45.0% | |
| AGGTTAATTCATGCGTGTGG+TGG | + | chr7_3:66379163-66379182 | Msa1117920:intron | 45.0% | |
| GAGAAGACAACGTCTTCATC+AGG | - | chr7_3:66379189-66379208 | None:intergenic | 45.0% | |
| GTACACCATTGTTGGTACCA+GGG | - | chr7_3:66379372-66379391 | None:intergenic | 45.0% | |
| TGTACACCATTGTTGGTACC+AGG | - | chr7_3:66379373-66379392 | None:intergenic | 45.0% | |
| ATACCATAAGGGTTCTCGCA+TGG | + | chr7_3:66379683-66379702 | Msa1117920:intron | 45.0% | |
| !! | CTGTTGATTTCTTCCTCTCC+TGG | - | chr7_3:66380230-66380249 | None:intergenic | 45.0% |
| CGAGAGAATGACAAACGAGT+TGG | + | chr7_3:66380265-66380284 | Msa1117920:CDS | 45.0% | |
| AAGTGTGTAGGGATGTTGCT+TGG | + | chr7_3:66380360-66380379 | Msa1117920:CDS | 45.0% | |
| ! | AGTGTGTAGGGATGTTGCTT+GGG | + | chr7_3:66380361-66380380 | Msa1117920:CDS | 45.0% |
| TGGGGAGAAAATAGAGAGCT+TGG | + | chr7_3:66380380-66380399 | Msa1117920:CDS | 45.0% | |
| GAAGCAGAGTCTTCTCTTAC+AGG | - | chr7_3:66380501-66380520 | None:intergenic | 45.0% | |
| !! | TATTAAAAATTAAATTAATG+TGG | + | chr7_3:66377556-66377575 | Msa1117920:intron | 5.0% |
| GGAAATGAGGTGGAGAATGC+CGG | - | chr7_3:66376160-66376179 | None:intergenic | 50.0% | |
| AACCGAAGGTAAGGAAACGG+CGG | - | chr7_3:66376203-66376222 | None:intergenic | 50.0% | |
| TTCTGGTGGCAAATTAGCGG+TGG | - | chr7_3:66376352-66376371 | None:intergenic | 50.0% | |
| AATTATCACGCGAGGTTCCG+AGG | + | chr7_3:66376424-66376443 | Msa1117920:CDS | 50.0% | |
| AAACACCAGCGTTAGTAGCG+AGG | + | chr7_3:66376511-66376530 | Msa1117920:CDS | 50.0% | |
| ! | ACAACTGACTCCGGTGAAGA+CGG | - | chr7_3:66376558-66376577 | None:intergenic | 50.0% |
| ! | CTCTTCTCCACAACTGACTC+CGG | - | chr7_3:66376567-66376586 | None:intergenic | 50.0% |
| GAGAAGAGACAGAAGCTGCT+TGG | + | chr7_3:66376579-66376598 | Msa1117920:CDS | 50.0% | |
| ! | TTGTGAGGTGAAGTGTTCGG+TGG | + | chr7_3:66376713-66376732 | Msa1117920:CDS | 50.0% |
| AAAGTGTGTGTGTGTGTGGG+GGG | + | chr7_3:66377426-66377445 | Msa1117920:intron | 50.0% | |
| ATATGATACTCCCTCCGTCC+CGG | + | chr7_3:66378354-66378373 | Msa1117920:intron | 50.0% | |
| ATGAGTCGGTTATTCCGGGA+CGG | - | chr7_3:66378371-66378390 | None:intergenic | 50.0% | |
| ! | CGTTTTGCTGGGAACCACTT+TGG | + | chr7_3:66378650-66378669 | Msa1117920:intron | 50.0% |
| TGTGTGATGTGTGTGTGTGG+TGG | - | chr7_3:66378715-66378734 | None:intergenic | 50.0% | |
| GTGTGTGTGATGTGTGTGTG+TGG | - | chr7_3:66378718-66378737 | None:intergenic | 50.0% | |
| ATCTTGGCCGTTGATGTGTG+TGG | - | chr7_3:66378755-66378774 | None:intergenic | 50.0% | |
| ! | GTATTTCCCCCGTTTTGCTC+TGG | + | chr7_3:66378816-66378835 | Msa1117920:intron | 50.0% |
| TTTGGACCAGAGCAAAACGG+GGG | - | chr7_3:66378825-66378844 | None:intergenic | 50.0% | |
| GTGCGTTTCTGCATGACTAG+GGG | - | chr7_3:66379039-66379058 | None:intergenic | 50.0% | |
| ! | GCTCTTGTTTGTTGGGAGGA+GGG | - | chr7_3:66379104-66379123 | None:intergenic | 50.0% |
| ! | CAAGGCTCTTGTTTGTTGGG+AGG | - | chr7_3:66379108-66379127 | None:intergenic | 50.0% |
| GCGCGAGCAAGTAACAAACA+AGG | - | chr7_3:66379126-66379145 | None:intergenic | 50.0% | |
| ! | TGTTTGTTACTTGCTCGCGC+AGG | + | chr7_3:66379126-66379145 | Msa1117920:intron | 50.0% |
| CGCAGGTACTTCATTTCTGC+AGG | + | chr7_3:66379143-66379162 | Msa1117920:intron | 50.0% | |
| CATCCATGCGAGAACCCTTA+TGG | - | chr7_3:66379689-66379708 | None:intergenic | 50.0% | |
| CATAAGGGTTCTCGCATGGA+TGG | + | chr7_3:66379687-66379706 | Msa1117920:intron | 50.0% | |
| CAGCAGTTACTGAAGAAGCC+AGG | + | chr7_3:66380209-66380228 | Msa1117920:CDS | 50.0% | |
| GTTACTGAAGAAGCCAGGAG+AGG | + | chr7_3:66380214-66380233 | Msa1117920:CDS | 50.0% | |
| ! | GTGTGTAGGGATGTTGCTTG+GGG | + | chr7_3:66380362-66380381 | Msa1117920:CDS | 50.0% |
| GTTTCTCGCCGTGAAGACGA+CGG | - | chr7_3:66376096-66376115 | None:intergenic | 55.0% | |
| CACCGCCGTTTCCTTACCTT+CGG | + | chr7_3:66376198-66376217 | Msa1117920:CDS | 55.0% | |
| ! | CAAATTAGCGGTGGCGGTGA+CGG | - | chr7_3:66376343-66376362 | None:intergenic | 55.0% |
| TGGTGGCAAATTAGCGGTGG+CGG | - | chr7_3:66376349-66376368 | None:intergenic | 55.0% | |
| TCCGAGGAGTCCGACTTTAC+CGG | + | chr7_3:66376440-66376459 | Msa1117920:CDS | 55.0% | |
| CGAATCTCCGCCGGTAAAGT+CGG | - | chr7_3:66376453-66376472 | None:intergenic | 55.0% | |
| AGATTCGCCGTTCGAGTCCA+AGG | + | chr7_3:66376466-66376485 | Msa1117920:CDS | 55.0% | |
| ATCAGCCTCGCTACTAACGC+TGG | - | chr7_3:66376519-66376538 | None:intergenic | 55.0% | |
| AGCGTTAGTAGCGAGGCTGA+TGG | + | chr7_3:66376518-66376537 | Msa1117920:CDS | 55.0% | |
| GCGTTAGTAGCGAGGCTGAT+GGG | + | chr7_3:66376519-66376538 | Msa1117920:CDS | 55.0% | |
| GGAATCGCTTCCGTCTTCAC+CGG | + | chr7_3:66376545-66376564 | Msa1117920:CDS | 55.0% | |
| GTCTTCACCGGAGTCAGTTG+TGG | + | chr7_3:66376557-66376576 | Msa1117920:CDS | 55.0% | |
| GAGATGCGACGAGGATCTCA+AGG | + | chr7_3:66376611-66376630 | Msa1117920:CDS | 55.0% | |
| ACCGTATGCTTAACCACCGC+CGG | - | chr7_3:66376693-66376712 | None:intergenic | 55.0% | |
| ACACAGGACTCGGCTGTTGT+TGG | - | chr7_3:66376749-66376768 | None:intergenic | 55.0% | |
| TGGCGACCGGAGTGACAATT+TGG | - | chr7_3:66376807-66376826 | None:intergenic | 55.0% | |
| AAGTGTGTGTGTGTGTGGGG+GGG | + | chr7_3:66377427-66377446 | Msa1117920:intron | 55.0% | |
| GTTTCTGCATGACTAGGGGC+AGG | - | chr7_3:66379035-66379054 | None:intergenic | 55.0% | |
| ! | TGTTTGTTGGGAGGAGGGAG+TGG | - | chr7_3:66379099-66379118 | None:intergenic | 55.0% |
| ! | GGCTCTTGTTTGTTGGGAGG+AGG | - | chr7_3:66379105-66379124 | None:intergenic | 55.0% |
| TTAGTTGTTGGGTGGGTCCC+TGG | + | chr7_3:66379352-66379371 | Msa1117920:intron | 55.0% | |
| TGGGTCCCTGGTACCAACAA+TGG | + | chr7_3:66379364-66379383 | Msa1117920:intron | 55.0% | |
| AAGGGTTCTCGCATGGATGG+TGG | + | chr7_3:66379690-66379709 | Msa1117920:intron | 55.0% | |
| TTCACGGCGAGAAACGACGC+CGG | + | chr7_3:66376101-66376120 | Msa1117920:CDS | 60.0% | |
| GTGGCGACGGGAATGAGAAG+TGG | - | chr7_3:66376181-66376200 | None:intergenic | 60.0% | |
| TAAGGAAACGGCGGTGGCGA+CGG | - | chr7_3:66376194-66376213 | None:intergenic | 60.0% | |
| CGAAGGTAAGGAAACGGCGG+TGG | - | chr7_3:66376200-66376219 | None:intergenic | 60.0% | |
| GCCGGTAAAGTCGGACTCCT+CGG | - | chr7_3:66376444-66376463 | None:intergenic | 60.0% | |
| GAGGAGTCCGACTTTACCGG+CGG | + | chr7_3:66376443-66376462 | Msa1117920:CDS | 60.0% | |
| AGTAGCGAGGCTGATGGGAC+TGG | + | chr7_3:66376524-66376543 | Msa1117920:CDS | 60.0% | |
| AGCGTTGCAGAGATGCGACG+AGG | + | chr7_3:66376602-66376621 | Msa1117920:CDS | 60.0% | |
| GACGTCGACGGAACGAGTTC+AGG | - | chr7_3:66376669-66376688 | None:intergenic | 60.0% | |
| GCCGGCGGTGGTTAAGCATA+CGG | + | chr7_3:66376689-66376708 | Msa1117920:CDS | 60.0% | |
| AGTGTGTGTGTGTGTGGGGG+GGG | + | chr7_3:66377428-66377447 | Msa1117920:intron | 60.0% | |
| GTCGGTTATTCCGGGACGGA+GGG | - | chr7_3:66378367-66378386 | None:intergenic | 60.0% | |
| AGTCGGTTATTCCGGGACGG+AGG | - | chr7_3:66378368-66378387 | None:intergenic | 60.0% | |
| !! | GAGGAGGGAGTGGTTTGGTG+GGG | - | chr7_3:66379089-66379108 | None:intergenic | 60.0% |
| !! | GGAGGAGGGAGTGGTTTGGT+GGG | - | chr7_3:66379090-66379109 | None:intergenic | 60.0% |
| GTTGGGAGGAGGGAGTGGTT+TGG | - | chr7_3:66379094-66379113 | None:intergenic | 60.0% | |
| !! | CGGTGTCGCCGTCGTCTTCA+CGG | + | chr7_3:66376085-66376104 | Msa1117920:CDS | 65.0% |
| AAGGAAACGGCGGTGGCGAC+GGG | - | chr7_3:66376193-66376212 | None:intergenic | 65.0% | |
| ! | ATTAGCGGTGGCGGTGACGG+TGG | - | chr7_3:66376340-66376359 | None:intergenic | 65.0% |
| CTCGAACGGCGAATCTCCGC+CGG | - | chr7_3:66376462-66376481 | None:intergenic | 65.0% | |
| ACTCGTTCCGTCGACGTCGC+CGG | + | chr7_3:66376671-66376690 | Msa1117920:CDS | 65.0% | |
| GTGTGTGTGTGTGTGGGGGG+GGG | + | chr7_3:66377429-66377448 | Msa1117920:intron | 65.0% | |
| TGTGTGTGTGTGTGGGGGGG+GGG | + | chr7_3:66377430-66377449 | Msa1117920:intron | 65.0% | |
| ! | GGGAGGAGGGAGTGGTTTGG+TGG | - | chr7_3:66379091-66379110 | None:intergenic | 65.0% |
| GTGTGTGTGTGTGGGGGGGG+GGG | + | chr7_3:66377431-66377450 | Msa1117920:intron | 70.0% | |
| TGTGTGTGTGTGGGGGGGGG+GGG | + | chr7_3:66377432-66377451 | Msa1117920:intron | 70.0% | |
| CGTTCCGTCGACGTCGCCGG+CGG | + | chr7_3:66376674-66376693 | Msa1117920:CDS | 75.0% | |
| ACCACCGCCGGCGACGTCGA+CGG | - | chr7_3:66376681-66376700 | None:intergenic | 75.0% | |
| GTGTGTGTGTGGGGGGGGGG+GGG | + | chr7_3:66377433-66377452 | Msa1117920:intron | 75.0% | |
| TGTGTGTGTGGGGGGGGGGG+GGG | + | chr7_3:66377434-66377453 | Msa1117920:intron | 75.0% | |
| ! | TCCGTCGACGTCGCCGGCGG+TGG | + | chr7_3:66376677-66376696 | Msa1117920:CDS | 80.0% |
| ! | GTGTGTGTGGGGGGGGGGGG+GGG | + | chr7_3:66377435-66377454 | Msa1117920:intron | 80.0% |
| ! | TGTGTGTGGGGGGGGGGGGG+GGG | + | chr7_3:66377436-66377455 | Msa1117920:intron | 80.0% |
| ! | GTGTGTGGGGGGGGGGGGGG+GGG | + | chr7_3:66377437-66377456 | Msa1117920:intron | 85.0% |
| ! | TGTGTGGGGGGGGGGGGGGG+GGG | + | chr7_3:66377438-66377457 | Msa1117920:intron | 85.0% |
| ! | GTGTGGGGGGGGGGGGGGGG+GGG | + | chr7_3:66377439-66377458 | Msa1117920:intron | 90.0% |
| ! | TGTGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:66377440-66377459 | Msa1117920:intron | 90.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:66377441-66377460 | Msa1117920:intron | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:66377442-66377461 | Msa1117920:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 66376010 | 66380699 | 66376010 | ID=Msa1117920;Name=Msa1117920 |
| chr7_3 | mRNA | 66376010 | 66380699 | 66376010 | ID=Msa1117920-mRNA-1;Parent=Msa1117920;Name=Msa1117920-mRNA-1;_AED=0.03;_eAED=0.03;_QI=56|1|1|1|1|1|3|176|337 |
| chr7_3 | exon | 66376010 | 66376219 | 66376010 | ID=Msa1117920-mRNA-1:exon:16025;Parent=Msa1117920-mRNA-1 |
| chr7_3 | exon | 66376310 | 66376834 | 66376310 | ID=Msa1117920-mRNA-1:exon:16026;Parent=Msa1117920-mRNA-1 |
| chr7_3 | exon | 66380189 | 66380699 | 66380189 | ID=Msa1117920-mRNA-1:exon:16027;Parent=Msa1117920-mRNA-1 |
| chr7_3 | five_prime_UTR | 66376010 | 66376065 | 66376010 | ID=Msa1117920-mRNA-1:five_prime_utr;Parent=Msa1117920-mRNA-1 |
| chr7_3 | CDS | 66376066 | 66376219 | 66376066 | ID=Msa1117920-mRNA-1:cds;Parent=Msa1117920-mRNA-1 |
| chr7_3 | CDS | 66376310 | 66376834 | 66376310 | ID=Msa1117920-mRNA-1:cds;Parent=Msa1117920-mRNA-1 |
| chr7_3 | CDS | 66380189 | 66380523 | 66380189 | ID=Msa1117920-mRNA-1:cds;Parent=Msa1117920-mRNA-1 |
| chr7_3 | three_prime_UTR | 66380524 | 66380699 | 66380524 | ID=Msa1117920-mRNA-1:three_prime_utr;Parent=Msa1117920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
