Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832700 | XP_003611134.1 | 95.342 | 365 | 11 | 2 | 1 | 365 | 1 | 359 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832700 | sp|Q9T0D3|HFB2B_ARATH | 49.573 | 351 | 134 | 7 | 16 | 355 | 51 | 369 | 3.33e-89 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832700 | B7FM72 | 95.342 | 365 | 11 | 2 | 1 | 365 | 1 | 359 | 0.0 | 709 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0832700 | TF | HSF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0832700 | 0.800996 | 1.108996e-48 | -8.615850e-47 |
| Msa0003220 | Msa0832700 | 0.820614 | 6.248776e-53 | -8.615850e-47 |
| Msa0003270 | Msa0832700 | 0.803704 | 3.070778e-49 | -8.615850e-47 |
| Msa0004540 | Msa0832700 | 0.803041 | 4.211849e-49 | -8.615850e-47 |
| Msa0010770 | Msa0832700 | 0.834303 | 3.239805e-56 | -8.615850e-47 |
| Msa0014830 | Msa0832700 | 0.805481 | 1.307672e-49 | -8.615850e-47 |
| Msa0029630 | Msa0832700 | 0.842946 | 1.895515e-58 | -8.615850e-47 |
| Msa0038870 | Msa0832700 | 0.830192 | 3.371772e-55 | -8.615850e-47 |
| Msa0041690 | Msa0832700 | 0.818134 | 2.296232e-52 | -8.615850e-47 |
| Msa0054530 | Msa0832700 | 0.810619 | 1.053623e-50 | -8.615850e-47 |
| Msa0068000 | Msa0832700 | 0.812006 | 5.267495e-51 | -8.615850e-47 |
| Msa0069330 | Msa0832700 | 0.810880 | 9.252051e-51 | -8.615850e-47 |
| Msa0070430 | Msa0832700 | 0.820721 | 5.904506e-53 | -8.615850e-47 |
| Msa0074750 | Msa0832700 | 0.814362 | 1.601113e-51 | -8.615850e-47 |
| Msa0077900 | Msa0832700 | 0.810861 | 9.337836e-51 | -8.615850e-47 |
| Msa0079920 | Msa0832700 | 0.834633 | 2.677573e-56 | -8.615850e-47 |
| Msa0091610 | Msa0832700 | 0.827983 | 1.157012e-54 | -8.615850e-47 |
| Msa0103790 | Msa0832700 | 0.809992 | 1.438323e-50 | -8.615850e-47 |
| Msa0104550 | Msa0832700 | 0.809784 | 1.594323e-50 | -8.615850e-47 |
| Msa0115090 | Msa0832700 | 0.813270 | 2.786387e-51 | -8.615850e-47 |
| Msa0115370 | Msa0832700 | 0.818739 | 1.675039e-52 | -8.615850e-47 |
| Msa0613920 | Msa0832700 | 0.817567 | 3.084181e-52 | -8.615850e-47 |
| Msa0614510 | Msa0832700 | 0.808919 | 2.444471e-50 | -8.615850e-47 |
| Msa0620230 | Msa0832700 | 0.867756 | 1.082469e-65 | -8.615850e-47 |
| Msa0628420 | Msa0832700 | 0.823767 | 1.160257e-53 | -8.615850e-47 |
| Msa0628500 | Msa0832700 | 0.826828 | 2.189062e-54 | -8.615850e-47 |
| Msa0642970 | Msa0832700 | 0.801722 | 7.872489e-49 | -8.615850e-47 |
| Msa0647430 | Msa0832700 | 0.803170 | 3.962010e-49 | -8.615850e-47 |
| Msa0652690 | Msa0832700 | 0.803991 | 2.676688e-49 | -8.615850e-47 |
| Msa0679100 | Msa0832700 | 0.810367 | 1.193902e-50 | -8.615850e-47 |
| Msa0697080 | Msa0832700 | 0.815205 | 1.041333e-51 | -8.615850e-47 |
| Msa0697720 | Msa0832700 | 0.813102 | 3.034101e-51 | -8.615850e-47 |
| Msa0699360 | Msa0832700 | 0.809697 | 1.664414e-50 | -8.615850e-47 |
| Msa0710270 | Msa0832700 | 0.806052 | 9.917181e-50 | -8.615850e-47 |
| Msa0713820 | Msa0832700 | 0.844890 | 5.710686e-59 | -8.615850e-47 |
| Msa0721230 | Msa0832700 | 0.983021 | 1.279746e-156 | -8.615850e-47 |
| Msa0734960 | Msa0832700 | 0.825534 | 4.448185e-54 | -8.615850e-47 |
| Msa0743530 | Msa0832700 | 0.828321 | 9.594357e-55 | -8.615850e-47 |
| Msa0750330 | Msa0832700 | -0.831743 | 1.404139e-55 | -8.615850e-47 |
| Msa0752510 | Msa0832700 | 0.819049 | 1.424357e-52 | -8.615850e-47 |
| Msa0752700 | Msa0832700 | 0.828466 | 8.852495e-55 | -8.615850e-47 |
| Msa0753460 | Msa0832700 | 0.964874 | 7.035804e-124 | -8.615850e-47 |
| Msa0756060 | Msa0832700 | 0.824468 | 7.940439e-54 | -8.615850e-47 |
| Msa0789560 | Msa0832700 | 0.813099 | 3.037742e-51 | -8.615850e-47 |
| Msa0790890 | Msa0832700 | 0.810447 | 1.147682e-50 | -8.615850e-47 |
| Msa0794970 | Msa0832700 | 0.831176 | 1.936129e-55 | -8.615850e-47 |
| Msa0795250 | Msa0832700 | 0.860025 | 2.752389e-63 | -8.615850e-47 |
| Msa0797750 | Msa0832700 | 0.823556 | 1.299556e-53 | -8.615850e-47 |
| Msa0811040 | Msa0832700 | 0.806117 | 9.610870e-50 | -8.615850e-47 |
| Msa0820200 | Msa0832700 | 0.813685 | 2.258854e-51 | -8.615850e-47 |
| Msa0822170 | Msa0832700 | 0.820962 | 5.198393e-53 | -8.615850e-47 |
| Msa0822180 | Msa0832700 | 0.817671 | 2.922116e-52 | -8.615850e-47 |
| Msa0828680 | Msa0832700 | 0.803872 | 2.832713e-49 | -8.615850e-47 |
| Msa0831100 | Msa0832700 | 0.829821 | 4.153917e-55 | -8.615850e-47 |
| Msa0832700 | Msa0835280 | 0.834893 | 2.303369e-56 | -8.615850e-47 |
| Msa0832700 | Msa0869010 | 0.800279 | 1.552461e-48 | -8.615850e-47 |
| Msa0832700 | Msa0869680 | 0.803712 | 3.058914e-49 | -8.615850e-47 |
| Msa0832700 | Msa0880450 | 0.870581 | 1.310002e-66 | -8.615850e-47 |
| Msa0832700 | Msa0898660 | 0.845567 | 3.747916e-59 | -8.615850e-47 |
| Msa0832700 | Msa0907850 | 0.800906 | 1.156780e-48 | -8.615850e-47 |
| Msa0832700 | Msa0943170 | 0.825923 | 3.597105e-54 | -8.615850e-47 |
| Msa0832700 | Msa0945240 | 0.800385 | 1.477817e-48 | -8.615850e-47 |
| Msa0832700 | Msa0998590 | 0.830915 | 2.243578e-55 | -8.615850e-47 |
| Msa0832700 | Msa1035230 | 0.825726 | 4.004859e-54 | -8.615850e-47 |
| Msa0832700 | Msa1036300 | 0.812579 | 3.949171e-51 | -8.615850e-47 |
| Msa0832700 | Msa1037510 | 0.830511 | 2.818267e-55 | -8.615850e-47 |
| Msa0832700 | Msa1051990 | 0.817210 | 3.711206e-52 | -8.615850e-47 |
| Msa0832700 | Msa1072600 | 0.804629 | 1.970599e-49 | -8.615850e-47 |
| Msa0832700 | Msa1075970 | 0.811552 | 6.611187e-51 | -8.615850e-47 |
| Msa0832700 | Msa1084430 | 0.815130 | 1.082165e-51 | -8.615850e-47 |
| Msa0832700 | Msa1113590 | 0.828670 | 7.901104e-55 | -8.615850e-47 |
| Msa0832700 | Msa1122780 | 0.804290 | 2.318596e-49 | -8.615850e-47 |
| Msa0832700 | Msa1123350 | 0.843082 | 1.743864e-58 | -8.615850e-47 |
| Msa0832700 | Msa1127430 | 0.806267 | 8.939546e-50 | -8.615850e-47 |
| Msa0832700 | Msa1127590 | 0.809442 | 1.888760e-50 | -8.615850e-47 |
| Msa0832700 | Msa1130980 | 0.831047 | 2.083207e-55 | -8.615850e-47 |
| Msa0832700 | Msa1174850 | 0.805073 | 1.592098e-49 | -8.615850e-47 |
| Msa0832700 | Msa1204850 | 0.807491 | 4.926031e-50 | -8.615850e-47 |
| Msa0832700 | Msa1205480 | 0.806413 | 8.327696e-50 | -8.615850e-47 |
| Msa0832700 | Msa1205590 | 0.832040 | 1.185848e-55 | -8.615850e-47 |
| Msa0832700 | Msa1206650 | 0.855097 | 7.928298e-62 | -8.615850e-47 |
| Msa0832700 | Msa1211340 | 0.805493 | 1.299743e-49 | -8.615850e-47 |
| Msa0832700 | Msa1227690 | 0.810816 | 9.551213e-51 | -8.615850e-47 |
| Msa0832700 | Msa1231820 | 0.802878 | 4.552095e-49 | -8.615850e-47 |
| Msa0832700 | Msa1250530 | 0.820954 | 5.219254e-53 | -8.615850e-47 |
| Msa0832700 | Msa1251160 | 0.809655 | 1.699585e-50 | -8.615850e-47 |
| Msa0832700 | Msa1255370 | 0.807716 | 4.411960e-50 | -8.615850e-47 |
| Msa0832700 | Msa1255410 | 0.824195 | 9.207723e-54 | -8.615850e-47 |
| Msa0832700 | Msa1256470 | 0.803255 | 3.803558e-49 | -8.615850e-47 |
| Msa0832700 | Msa1257070 | 0.839323 | 1.697784e-57 | -8.615850e-47 |
| Msa0832700 | Msa1259640 | 0.813628 | 2.324675e-51 | -8.615850e-47 |
| Msa0832700 | Msa1266020 | 0.824955 | 6.097767e-54 | -8.615850e-47 |
| Msa0832700 | Msa1295910 | 0.806453 | 8.166318e-50 | -8.615850e-47 |
| Msa0832700 | Msa1297530 | 0.803989 | 2.678302e-49 | -8.615850e-47 |
| Msa0832700 | Msa1298100 | 0.802685 | 4.990102e-49 | -8.615850e-47 |
| Msa0832700 | Msa1307950 | 0.814990 | 1.162845e-51 | -8.615850e-47 |
| Msa0832700 | Msa1320820 | 0.809046 | 2.295921e-50 | -8.615850e-47 |
| Msa0832700 | Msa1327640 | 0.860884 | 1.512609e-63 | -8.615850e-47 |
| Msa0832700 | Msa1329790 | 0.809796 | 1.585399e-50 | -8.615850e-47 |
| Msa0832700 | Msa1336040 | 0.805928 | 1.053457e-49 | -8.615850e-47 |
| Msa0832700 | Msa1344310 | 0.805358 | 1.387102e-49 | -8.615850e-47 |
| Msa0832700 | Msa1344850 | 0.800110 | 1.680676e-48 | -8.615850e-47 |
| Msa0832700 | Msa1356610 | 0.847263 | 1.291575e-59 | -8.615850e-47 |
| Msa0832700 | Msa1362420 | 0.837602 | 4.718704e-57 | -8.615850e-47 |
| Msa0832700 | Msa1367590 | 0.827036 | 1.952461e-54 | -8.615850e-47 |
| Msa0832700 | Msa1372290 | 0.806997 | 6.267575e-50 | -8.615850e-47 |
| Msa0832700 | Msa1373850 | 0.804177 | 2.448072e-49 | -8.615850e-47 |
| Msa0832700 | Msa1376650 | 0.821349 | 4.234110e-53 | -8.615850e-47 |
| Msa0832700 | Msa1377800 | 0.840442 | 8.674711e-58 | -8.615850e-47 |
| Msa0832700 | Msa1411950 | 0.824593 | 7.421516e-54 | -8.615850e-47 |
| Msa0832700 | Msa1416260 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa0832700 | Msa1418340 | 0.833485 | 5.191898e-56 | -8.615850e-47 |
| Msa0832700 | Msa1421560 | 0.818835 | 1.593265e-52 | -8.615850e-47 |
| Msa0832700 | Msa1450720 | 0.832172 | 1.099853e-55 | -8.615850e-47 |
| Msa0832700 | Msa1459960 | 0.805851 | 1.093366e-49 | -8.615850e-47 |
| Msa0125450 | Msa0832700 | 0.840004 | 1.129035e-57 | -8.615850e-47 |
| Msa0125540 | Msa0832700 | 0.842918 | 1.927969e-58 | -8.615850e-47 |
| Msa0127850 | Msa0832700 | 0.801015 | 1.099181e-48 | -8.615850e-47 |
| Msa0130240 | Msa0832700 | 0.806703 | 7.233063e-50 | -8.615850e-47 |
| Msa0136120 | Msa0832700 | 0.827701 | 1.352611e-54 | -8.615850e-47 |
| Msa0146080 | Msa0832700 | 0.823385 | 1.425106e-53 | -8.615850e-47 |
| Msa0147980 | Msa0832700 | 0.803127 | 4.043665e-49 | -8.615850e-47 |
| Msa0150260 | Msa0832700 | 0.820898 | 5.378374e-53 | -8.615850e-47 |
| Msa0150570 | Msa0832700 | 0.812326 | 4.485616e-51 | -8.615850e-47 |
| Msa0167980 | Msa0832700 | 0.804411 | 2.187942e-49 | -8.615850e-47 |
| Msa0183420 | Msa0832700 | 0.807307 | 5.388794e-50 | -8.615850e-47 |
| Msa0183870 | Msa0832700 | 0.806866 | 6.680369e-50 | -8.615850e-47 |
| Msa0185400 | Msa0832700 | 0.805668 | 1.194684e-49 | -8.615850e-47 |
| Msa0195630 | Msa0832700 | 0.800702 | 1.273289e-48 | -8.615850e-47 |
| Msa0201500 | Msa0832700 | 0.802007 | 6.881042e-49 | -8.615850e-47 |
| Msa0217670 | Msa0832700 | 0.808185 | 3.507146e-50 | -8.615850e-47 |
| Msa0237200 | Msa0832700 | 0.836912 | 7.086569e-57 | -8.615850e-47 |
| Msa0237410 | Msa0832700 | 0.806482 | 8.052240e-50 | -8.615850e-47 |
| Msa0375980 | Msa0832700 | 0.803998 | 2.667022e-49 | -8.615850e-47 |
| Msa0376280 | Msa0832700 | 0.812691 | 3.732381e-51 | -8.615850e-47 |
| Msa0377450 | Msa0832700 | 0.808438 | 3.097654e-50 | -8.615850e-47 |
| Msa0378980 | Msa0832700 | 0.811990 | 5.310747e-51 | -8.615850e-47 |
| Msa0380300 | Msa0832700 | 0.801818 | 7.524268e-49 | -8.615850e-47 |
| Msa0382310 | Msa0832700 | 0.807855 | 4.122736e-50 | -8.615850e-47 |
| Msa0382370 | Msa0832700 | 0.809869 | 1.529058e-50 | -8.615850e-47 |
| Msa0395980 | Msa0832700 | 0.802583 | 5.237857e-49 | -8.615850e-47 |
| Msa0431210 | Msa0832700 | 0.813244 | 2.823561e-51 | -8.615850e-47 |
| Msa0432070 | Msa0832700 | 0.813104 | 3.030243e-51 | -8.615850e-47 |
| Msa0434570 | Msa0832700 | 0.802049 | 6.746995e-49 | -8.615850e-47 |
| Msa0434770 | Msa0832700 | 0.802730 | 4.883739e-49 | -8.615850e-47 |
| Msa0440510 | Msa0832700 | 0.803494 | 3.393253e-49 | -8.615850e-47 |
| Msa0471690 | Msa0832700 | 0.830330 | 3.121237e-55 | -8.615850e-47 |
| Msa0474950 | Msa0832700 | 0.803423 | 3.511523e-49 | -8.615850e-47 |
| Msa0475790 | Msa0832700 | 0.804195 | 2.427759e-49 | -8.615850e-47 |
| Msa0243090 | Msa0832700 | 0.807231 | 5.591193e-50 | -8.615850e-47 |
| Msa0244980 | Msa0832700 | 0.808823 | 2.562476e-50 | -8.615850e-47 |
| Msa0247060 | Msa0832700 | 0.802360 | 5.822323e-49 | -8.615850e-47 |
| Msa0257490 | Msa0832700 | 0.815750 | 7.876731e-52 | -8.615850e-47 |
| Msa0274970 | Msa0832700 | 0.833034 | 6.724385e-56 | -8.615850e-47 |
| Msa0284820 | Msa0832700 | 0.803812 | 2.915817e-49 | -8.615850e-47 |
| Msa0296790 | Msa0832700 | 0.826623 | 2.450568e-54 | -8.615850e-47 |
| Msa0310430 | Msa0832700 | 0.805263 | 1.452651e-49 | -8.615850e-47 |
| Msa0311720 | Msa0832700 | 0.803035 | 4.224640e-49 | -8.615850e-47 |
| Msa0315680 | Msa0832700 | 0.829446 | 5.125737e-55 | -8.615850e-47 |
| Msa0323560 | Msa0832700 | 0.813255 | 2.807426e-51 | -8.615850e-47 |
| Msa0324240 | Msa0832700 | 0.815104 | 1.096689e-51 | -8.615850e-47 |
| Msa0336360 | Msa0832700 | 0.800933 | 1.142344e-48 | -8.615850e-47 |
| Msa0342290 | Msa0832700 | 0.822400 | 2.417184e-53 | -8.615850e-47 |
| Msa0363060 | Msa0832700 | 0.836316 | 1.005115e-56 | -8.615850e-47 |
| Msa0363640 | Msa0832700 | 0.828340 | 9.494214e-55 | -8.615850e-47 |
| Msa0484290 | Msa0832700 | 0.812763 | 3.599759e-51 | -8.615850e-47 |
| Msa0484740 | Msa0832700 | 0.840409 | 8.847447e-58 | -8.615850e-47 |
| Msa0491000 | Msa0832700 | 0.817127 | 3.874405e-52 | -8.615850e-47 |
| Msa0504780 | Msa0832700 | 0.819739 | 9.915022e-53 | -8.615850e-47 |
| Msa0511770 | Msa0832700 | 0.802848 | 4.617004e-49 | -8.615850e-47 |
| Msa0520270 | Msa0832700 | 0.810225 | 1.281297e-50 | -8.615850e-47 |
| Msa0524500 | Msa0832700 | 0.829472 | 5.050447e-55 | -8.615850e-47 |
| Msa0531250 | Msa0832700 | 0.811699 | 6.144878e-51 | -8.615850e-47 |
| Msa0547160 | Msa0832700 | 0.807569 | 4.741603e-50 | -8.615850e-47 |
| Msa0547990 | Msa0832700 | 0.813653 | 2.295191e-51 | -8.615850e-47 |
| Msa0552810 | Msa0832700 | 0.818116 | 2.317864e-52 | -8.615850e-47 |
| Msa0577200 | Msa0832700 | -0.832048 | 1.180760e-55 | -8.615850e-47 |
| Msa0581070 | Msa0832700 | 0.817460 | 3.260843e-52 | -8.615850e-47 |
| Msa0600450 | Msa0832700 | 0.804123 | 2.512428e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832700 | MtrunA17_Chr5g0397881 | 95.342 | 365 | 11 | 2 | 1 | 365 | 1 | 359 | 0.0 | 709 |
| Msa0832700 | MtrunA17_Chr6g0472421 | 45.745 | 376 | 119 | 14 | 5 | 353 | 7 | 324 | 2.25e-81 | 252 |
| Msa0832700 | MtrunA17_Chr1g0203601 | 45.773 | 343 | 117 | 11 | 6 | 347 | 5 | 279 | 2.72e-74 | 232 |
| Msa0832700 | MtrunA17_Chr3g0134031 | 46.087 | 230 | 113 | 4 | 1 | 219 | 1 | 230 | 4.67e-60 | 197 |
| Msa0832700 | MtrunA17_Chr5g0402291 | 45.490 | 255 | 112 | 7 | 17 | 260 | 2 | 240 | 1.23e-59 | 194 |
| Msa0832700 | MtrunA17_Chr5g0441531 | 44.248 | 226 | 101 | 4 | 14 | 239 | 15 | 215 | 5.99e-58 | 189 |
| Msa0832700 | MtrunA17_Chr7g0257331 | 44.724 | 199 | 75 | 3 | 18 | 216 | 16 | 179 | 3.48e-48 | 162 |
| Msa0832700 | MtrunA17_Chr5g0410881 | 72.000 | 100 | 26 | 1 | 22 | 121 | 30 | 127 | 6.74e-46 | 164 |
| Msa0832700 | MtrunA17_Chr8g0375041 | 42.211 | 199 | 85 | 3 | 17 | 215 | 2 | 170 | 9.73e-45 | 154 |
| Msa0832700 | MtrunA17_Chr6g0467041 | 60.952 | 105 | 41 | 0 | 24 | 128 | 22 | 126 | 7.22e-43 | 151 |
| Msa0832700 | MtrunA17_Chr7g0260331 | 65.957 | 94 | 32 | 0 | 22 | 115 | 47 | 140 | 3.52e-42 | 150 |
| Msa0832700 | MtrunA17_Chr1g0185131 | 67.021 | 94 | 31 | 0 | 22 | 115 | 30 | 123 | 5.62e-42 | 149 |
| Msa0832700 | MtrunA17_Chr8g0379701 | 64.356 | 101 | 35 | 1 | 15 | 115 | 4 | 103 | 1.26e-41 | 150 |
| Msa0832700 | MtrunA17_Chr4g0039891 | 63.265 | 98 | 36 | 0 | 24 | 121 | 12 | 109 | 1.77e-40 | 149 |
| Msa0832700 | MtrunA17_Chr4g0047421 | 37.624 | 202 | 89 | 3 | 21 | 218 | 30 | 198 | 2.48e-40 | 141 |
| Msa0832700 | MtrunA17_Chr8g0378061 | 60.577 | 104 | 41 | 0 | 25 | 128 | 23 | 126 | 5.06e-40 | 147 |
| Msa0832700 | MtrunA17_Chr3g0135831 | 62.500 | 96 | 36 | 0 | 22 | 117 | 44 | 139 | 2.76e-38 | 140 |
| Msa0832700 | MtrunA17_Chr4g0071051 | 63.441 | 93 | 34 | 0 | 22 | 114 | 99 | 191 | 5.00e-38 | 141 |
| Msa0832700 | MtrunA17_Chr1g0204741 | 63.830 | 94 | 34 | 0 | 22 | 115 | 38 | 131 | 1.21e-37 | 138 |
| Msa0832700 | MtrunA17_Chr6g0485571 | 59.184 | 98 | 40 | 0 | 18 | 115 | 5 | 102 | 3.90e-37 | 137 |
| Msa0832700 | MtrunA17_Chr2g0330821 | 52.137 | 117 | 56 | 0 | 12 | 128 | 67 | 183 | 7.30e-37 | 136 |
| Msa0832700 | MtrunA17_Chr2g0284481 | 51.240 | 121 | 58 | 1 | 11 | 131 | 3 | 122 | 1.39e-36 | 136 |
| Msa0832700 | MtrunA17_Chr8g0392001 | 59.140 | 93 | 37 | 1 | 24 | 115 | 22 | 114 | 2.65e-32 | 124 |
| Msa0832700 | MtrunA17_Chr1g0179321 | 63.636 | 66 | 24 | 0 | 18 | 83 | 43 | 108 | 2.03e-24 | 96.3 |
| Msa0832700 | MtrunA17_Chr4g0023771 | 54.054 | 74 | 32 | 2 | 11 | 83 | 3 | 75 | 3.10e-19 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832700 | AT4G11660.1 | 49.573 | 351 | 134 | 7 | 16 | 355 | 51 | 369 | 3.39e-90 | 276 |
| Msa0832700 | AT5G62020.1 | 46.302 | 311 | 116 | 8 | 1 | 305 | 1 | 266 | 9.70e-82 | 251 |
| Msa0832700 | AT4G36990.1 | 50.242 | 207 | 86 | 3 | 12 | 218 | 2 | 191 | 1.16e-61 | 199 |
| Msa0832700 | AT1G46264.1 | 37.248 | 298 | 172 | 5 | 19 | 306 | 29 | 321 | 4.54e-59 | 195 |
| Msa0832700 | AT2G41690.1 | 40.930 | 215 | 110 | 2 | 4 | 218 | 20 | 217 | 1.51e-48 | 164 |
| Msa0832700 | AT1G32330.1 | 65.289 | 121 | 38 | 2 | 1 | 121 | 16 | 132 | 6.73e-47 | 166 |
| Msa0832700 | AT1G32330.2 | 65.289 | 121 | 38 | 2 | 1 | 121 | 16 | 132 | 7.01e-47 | 166 |
| Msa0832700 | AT4G17750.1 | 61.667 | 120 | 46 | 0 | 2 | 121 | 30 | 149 | 1.37e-46 | 166 |
| Msa0832700 | AT3G02990.1 | 66.355 | 107 | 34 | 2 | 9 | 115 | 10 | 114 | 9.14e-43 | 155 |
| Msa0832700 | AT3G22830.1 | 67.347 | 98 | 32 | 0 | 18 | 115 | 55 | 152 | 6.65e-42 | 151 |
| Msa0832700 | AT4G13980.1 | 60.000 | 110 | 38 | 1 | 25 | 128 | 24 | 133 | 3.01e-40 | 148 |
| Msa0832700 | AT5G16820.1 | 67.708 | 96 | 30 | 1 | 20 | 115 | 24 | 118 | 7.68e-40 | 147 |
| Msa0832700 | AT5G16820.2 | 67.708 | 96 | 30 | 1 | 20 | 115 | 24 | 118 | 7.68e-40 | 147 |
| Msa0832700 | AT5G43840.1 | 63.830 | 94 | 34 | 0 | 22 | 115 | 17 | 110 | 2.74e-39 | 141 |
| Msa0832700 | AT2G26150.1 | 61.702 | 94 | 36 | 0 | 22 | 115 | 42 | 135 | 5.03e-39 | 142 |
| Msa0832700 | AT2G26150.4 | 61.702 | 94 | 36 | 0 | 22 | 115 | 42 | 135 | 5.03e-39 | 142 |
| Msa0832700 | AT3G63350.1 | 58.763 | 97 | 40 | 0 | 18 | 114 | 22 | 118 | 1.28e-38 | 139 |
| Msa0832700 | AT5G03720.2 | 64.211 | 95 | 33 | 1 | 21 | 115 | 53 | 146 | 5.13e-38 | 141 |
| Msa0832700 | AT5G03720.1 | 64.211 | 95 | 33 | 1 | 21 | 115 | 53 | 146 | 5.13e-38 | 141 |
| Msa0832700 | AT3G51910.1 | 60.215 | 93 | 37 | 0 | 22 | 114 | 27 | 119 | 1.09e-37 | 137 |
| Msa0832700 | AT5G54070.1 | 60.638 | 94 | 37 | 0 | 21 | 114 | 68 | 161 | 1.09e-37 | 138 |
| Msa0832700 | AT3G24520.1 | 65.217 | 92 | 32 | 0 | 24 | 115 | 17 | 108 | 1.17e-36 | 135 |
| Msa0832700 | AT4G18880.1 | 58.824 | 119 | 46 | 2 | 17 | 135 | 9 | 124 | 3.09e-35 | 133 |
| Msa0832700 | AT5G45710.3 | 58.621 | 116 | 44 | 3 | 20 | 135 | 10 | 121 | 1.26e-34 | 130 |
| Msa0832700 | AT5G45710.1 | 58.621 | 116 | 44 | 3 | 20 | 135 | 10 | 121 | 1.26e-34 | 130 |
| Msa0832700 | AT1G67970.1 | 60.215 | 93 | 36 | 1 | 24 | 115 | 19 | 111 | 1.01e-33 | 129 |
| Msa0832700 | AT4G18870.1 | 45.263 | 95 | 49 | 1 | 20 | 111 | 139 | 233 | 1.09e-22 | 97.1 |
| Msa0832700 | AT4G18870.1 | 47.191 | 89 | 42 | 3 | 25 | 111 | 14 | 99 | 3.53e-20 | 90.1 |
| Msa0832700 | AT1G77570.1 | 39.326 | 89 | 49 | 3 | 25 | 109 | 27 | 114 | 3.01e-13 | 67.0 |
Find 133 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATGTTCCTAAGCTGTTT+GGG | 0.212139 | 5_4:+5791473 | Msa0832700:CDS |
| TGTAACAGAAGGGAAAATTT+TGG | 0.225929 | 5_4:+5791330 | Msa0832700:CDS |
| TCTTCTTCTGACTCCGTTTC+CGG | 0.235189 | 5_4:+5790217 | Msa0832700:five_prime_UTR |
| GCTAATGAAACATTCCTTAT+AGG | 0.235307 | 5_4:-5791361 | None:intergenic |
| TAAAGGCCGTGTTTGGAATT+TGG | 0.236573 | 5_4:+5791715 | Msa0832700:three_prime_UTR |
| GTGTTTATTTCTAGGGATTT+CGG | 0.268121 | 5_4:+5790849 | Msa0832700:intron |
| AAGCTGTTTGGGGTTTCAAT+TGG | 0.272470 | 5_4:+5791484 | Msa0832700:CDS |
| CCTCATGTTCCTAAGCTGTT+TGG | 0.282001 | 5_4:+5791472 | Msa0832700:CDS |
| ATGATGAGTAATTATGCTTC+TGG | 0.326687 | 5_4:+5791253 | Msa0832700:CDS |
| TCCCACAAGCATGTCTAAAA+AGG | 0.327270 | 5_4:-5792070 | None:intergenic |
| ATGGAACAAGCTTCATAGTT+TGG | 0.332696 | 5_4:+5790645 | Msa0832700:CDS |
| CCGTTGATGATTTGGTTTCA+TGG | 0.341139 | 5_4:+5790615 | Msa0832700:CDS |
| ATTGAGTTGACGAACGAAAC+TGG | 0.358502 | 5_4:-5790726 | None:intergenic |
| ATGGTGTCTCCAGCAACTTC+TGG | 0.358649 | 5_4:+5791043 | Msa0832700:CDS |
| TGATTCTTCCGTTGATGATT+TGG | 0.364300 | 5_4:+5790607 | Msa0832700:CDS |
| AGGAGAGGATAGGAATAAAA+AGG | 0.370793 | 5_4:-5790134 | None:intergenic |
| CTGCCACCGGCGACGGCGTT+AGG | 0.374761 | 5_4:-5790192 | None:intergenic |
| AACGCATTCCATCTCTTTCA+AGG | 0.375340 | 5_4:+5790252 | Msa0832700:five_prime_UTR |
| GAAGTTGATGGCGACATTAC+CGG | 0.375837 | 5_4:+5790499 | Msa0832700:exon |
| AGCTGTTTGGGGTTTCAATT+GGG | 0.377393 | 5_4:+5791485 | Msa0832700:CDS |
| AGCAACTTCTGGTGATGAAC+AGG | 0.397317 | 5_4:+5791054 | Msa0832700:CDS |
| TTATTGTGTTTGAAATACTT+TGG | 0.401377 | 5_4:-5790698 | None:intergenic |
| AATACTATAATTATGTTACT+TGG | 0.403069 | 5_4:-5792211 | None:intergenic |
| CAGACACTAGCTGGTGTCAT+TGG | 0.404857 | 5_4:+5791794 | Msa0832700:three_prime_UTR |
| TGCTGCGACGGCACGGGGCG+TGG | 0.405775 | 5_4:+5791306 | Msa0832700:CDS |
| CTTAATGTGGGTGGAGCTGC+TGG | 0.418056 | 5_4:+5791400 | Msa0832700:CDS |
| TCTAATTTGATACATGTACT+AGG | 0.423269 | 5_4:+5792158 | Msa0832700:three_prime_UTR |
| ATAGTGGTAAAGGCCGTGTT+TGG | 0.429939 | 5_4:+5791708 | Msa0832700:exon |
| TACGAGTGCTGCGACGGCAC+GGG | 0.438079 | 5_4:+5791300 | Msa0832700:CDS |
| ATGCGTTGAAATATTCTAAC+CGG | 0.439764 | 5_4:-5790236 | None:intergenic |
| GACGGAGAATGAGGTTGAAC+CGG | 0.444512 | 5_4:+5791522 | Msa0832700:CDS |
| TTTGGAATTTGGATTATGTC+GGG | 0.453154 | 5_4:+5791726 | Msa0832700:three_prime_UTR |
| ACATGAGGTGCCTCAACCTC+TGG | 0.453623 | 5_4:-5791457 | None:intergenic |
| CGGATGATCAAGAGCGTCGT+TGG | 0.460641 | 5_4:+5791674 | Msa0832700:CDS |
| ATGTGAGACGACGAGTTTGA+TGG | 0.466931 | 5_4:+5791432 | Msa0832700:CDS |
| ATTGTTTACCTTGAAAGAGA+TGG | 0.467486 | 5_4:-5790260 | None:intergenic |
| GCCATAGCTGTTCCTGCTGC+CGG | 0.467534 | 5_4:-5790965 | None:intergenic |
| GTTTGGAATTTGGATTATGT+CGG | 0.467678 | 5_4:+5791725 | Msa0832700:three_prime_UTR |
| TTGGTTTCATGGAATGAAGA+TGG | 0.472004 | 5_4:+5790626 | Msa0832700:CDS |
| TGAAATATTCTAACCGGAAA+CGG | 0.475649 | 5_4:-5790230 | None:intergenic |
| TGTTCATCACCAGAAGTTGC+TGG | 0.476217 | 5_4:-5791052 | None:intergenic |
| GGTGTAATTAGGAACAGATC+TGG | 0.477002 | 5_4:+5790472 | Msa0832700:five_prime_UTR |
| AGAGATTCTAGAAGTTTCGA+AGG | 0.477691 | 5_4:-5790154 | None:intergenic |
| GCACCATTGTTCACCGCAAT+CGG | 0.477786 | 5_4:-5791097 | None:intergenic |
| CGCTAACCTAACGCCGTCGC+CGG | 0.479775 | 5_4:+5790186 | Msa0832700:five_prime_UTR |
| AGATCTGGAAAAGAAGTTGA+TGG | 0.487529 | 5_4:+5790487 | Msa0832700:exon |
| GATTCACCTGTTTGCTCCAC+CGG | 0.494684 | 5_4:-5790518 | None:intergenic |
| ACATTACCGGTGGAGCAAAC+AGG | 0.498008 | 5_4:+5790512 | Msa0832700:CDS |
| TGAACCGGAGAGAGAGGAAC+GGG | 0.498202 | 5_4:+5791537 | Msa0832700:CDS |
| CATGGCTAACAGACACTAGC+TGG | 0.498441 | 5_4:+5791785 | Msa0832700:three_prime_UTR |
| ATGTTACTTGGAAACAAAGT+TGG | 0.498921 | 5_4:-5792199 | None:intergenic |
| GCTGGAGACACCATTCTAAC+CGG | 0.500615 | 5_4:-5791034 | None:intergenic |
| ACTAGGATGCTTCCACCCTA+TGG | 0.501720 | 5_4:+5792175 | Msa0832700:three_prime_UTR |
| GTTGGAAATTGACGAAATAG+TGG | 0.503816 | 5_4:+5791692 | Msa0832700:CDS |
| GTCGAATTCATCTCCGATTG+CGG | 0.505685 | 5_4:+5791084 | Msa0832700:CDS |
| ATTGAAACCCCAAACAGCTT+AGG | 0.506033 | 5_4:-5791481 | None:intergenic |
| CAATTGGGCTTAAACGATGT+AGG | 0.509913 | 5_4:+5791500 | Msa0832700:CDS |
| TTAGCAAATTCCCACCGGTC+AGG | 0.510367 | 5_4:-5790881 | None:intergenic |
| TCATTCTCTTCAACTAACTC+CGG | 0.512986 | 5_4:-5791154 | None:intergenic |
| TTCGGAAAGTTGTACCTGAC+CGG | 0.514506 | 5_4:+5790867 | Msa0832700:CDS |
| CTACGAGTGCTGCGACGGCA+CGG | 0.515613 | 5_4:+5791299 | Msa0832700:CDS |
| TTCTAGAAGTTTCGAAGGAG+AGG | 0.516926 | 5_4:-5790149 | None:intergenic |
| ATCTTCTACGAGTGCTGCGA+CGG | 0.517274 | 5_4:+5791294 | Msa0832700:CDS |
| TGTTCCCGTTCCTCTCTCTC+CGG | 0.518493 | 5_4:-5791541 | None:intergenic |
| TGGAAACAAAGTTGGTCCAT+AGG | 0.519124 | 5_4:-5792191 | None:intergenic |
| GGAAACAAAGTTGGTCCATA+GGG | 0.527244 | 5_4:-5792190 | None:intergenic |
| CTGTTAGCCATGTTCAAACA+TGG | 0.530720 | 5_4:-5791774 | None:intergenic |
| TATGGCGGCACCGGTTAGAA+TGG | 0.532149 | 5_4:+5791024 | Msa0832700:CDS |
| AATTGACGAAATAGTGGTAA+AGG | 0.534223 | 5_4:+5791698 | Msa0832700:exon |
| AAAAGGAGCGTGTGTGTTGG+TGG | 0.534804 | 5_4:-5790117 | None:intergenic |
| TCATGTTCCTAAGCTGTTTG+GGG | 0.536796 | 5_4:+5791474 | Msa0832700:CDS |
| AACAGTAGCTATGGCGGCAC+CGG | 0.542259 | 5_4:+5791015 | Msa0832700:CDS |
| TGAGGTTGAACCGGAGAGAG+AGG | 0.546548 | 5_4:+5791531 | Msa0832700:CDS |
| CATGAGTTGCACCACTGCGC+CGG | 0.546633 | 5_4:+5791135 | Msa0832700:CDS |
| CGGTGGGAATTTGCTAATGA+CGG | 0.547176 | 5_4:+5790887 | Msa0832700:CDS |
| GGTGGAGCAAACAGGTGAAT+CGG | 0.547365 | 5_4:+5790520 | Msa0832700:CDS |
| GCCGGCAGCAGGAACAGCTA+TGG | 0.547975 | 5_4:+5790964 | Msa0832700:CDS |
| TAATACTGTAACAGTAGCTA+TGG | 0.548334 | 5_4:+5791006 | Msa0832700:CDS |
| TCTTTCTCTAAGCAAAATTG+TGG | 0.554230 | 5_4:-5791975 | None:intergenic |
| ACGATGTAGGACGGAGAATG+AGG | 0.556638 | 5_4:+5791513 | Msa0832700:CDS |
| ACGAGTGCTGCGACGGCACG+GGG | 0.561173 | 5_4:+5791301 | Msa0832700:CDS |
| TTTGATGGAACCAGAGGTTG+AGG | 0.561367 | 5_4:+5791447 | Msa0832700:CDS |
| GAAGAAACTGCCACCGGCGA+CGG | 0.562969 | 5_4:-5790199 | None:intergenic |
| CTAGCTGGTGTCATTGGACA+AGG | 0.568184 | 5_4:+5791800 | Msa0832700:three_prime_UTR |
| AAATCTCTAGCAAATTCAGC+AGG | 0.569125 | 5_4:-5790671 | None:intergenic |
| ACGCTTGCTTGAGCAAAGCA+TGG | 0.569500 | 5_4:-5791920 | None:intergenic |
| TGGTGATGGTGATGGTGACT+CGG | 0.574712 | 5_4:+5791654 | Msa0832700:CDS |
| TCTCCGATTGCGGTGAACAA+TGG | 0.579507 | 5_4:+5791094 | Msa0832700:CDS |
| CGGGGCGTGGTTGTAACAGA+AGG | 0.579523 | 5_4:+5791319 | Msa0832700:CDS |
| GAAGTTTCGAAGGAGAGGAT+AGG | 0.579811 | 5_4:-5790144 | None:intergenic |
| AACAGGTGAATCGGCGACGG+CGG | 0.583900 | 5_4:+5790529 | Msa0832700:CDS |
| AATGAGCTAAGTCAATTGAA+AGG | 0.584859 | 5_4:+5791208 | Msa0832700:CDS |
| AAGGAATGTTTCATTAGCTG+AGG | 0.585509 | 5_4:+5791366 | Msa0832700:CDS |
| CCTCGTGATGGTGATGGTGA+TGG | 0.588325 | 5_4:+5791646 | Msa0832700:CDS |
| ATCAAACTCGTCGTCTCACA+TGG | 0.592517 | 5_4:-5791430 | None:intergenic |
| AAAGGAGCGTGTGTGTTGGT+GGG | 0.603469 | 5_4:-5790116 | None:intergenic |
| AACAAAGTTGGTCCATAGGG+TGG | 0.604166 | 5_4:-5792187 | None:intergenic |
| GCAAACAGGTGAATCGGCGA+CGG | 0.608757 | 5_4:+5790526 | Msa0832700:CDS |
| AACTTCTGGTGATGAACAGG+TGG | 0.612326 | 5_4:+5791057 | Msa0832700:CDS |
| AGTTAGTTGAAGAGAATGAA+AGG | 0.612844 | 5_4:+5791158 | Msa0832700:CDS |
| CCATGAAACCAAATCATCAA+CGG | 0.613347 | 5_4:-5790615 | None:intergenic |
| TAACCTAACGCCGTCGCCGG+TGG | 0.614840 | 5_4:+5790189 | Msa0832700:five_prime_UTR |
| GGAAAGTTGTACCTGACCGG+TGG | 0.614886 | 5_4:+5790870 | Msa0832700:CDS |
| TCTGAACCTCGTGATGGTGA+TGG | 0.617342 | 5_4:+5791640 | Msa0832700:CDS |
| ATTTGCTTCGAGATATTCAG+CGG | 0.621869 | 5_4:+5790930 | Msa0832700:CDS |
| TTCAACTAACTCCGGCGCAG+TGG | 0.622278 | 5_4:-5791146 | None:intergenic |
| GATGCAAACACAATCCTCGC+AGG | 0.623759 | 5_4:+5791591 | Msa0832700:CDS |
| GCAGGAGACTGATCGAGGAT+CGG | 0.626303 | 5_4:+5791609 | Msa0832700:CDS |
| TCCTCGCAGGAGACTGATCG+AGG | 0.628520 | 5_4:+5791604 | Msa0832700:CDS |
| GAAAGTTGTACCTGACCGGT+GGG | 0.631205 | 5_4:+5790871 | Msa0832700:CDS |
| TACTGTAACAGTAGCTATGG+CGG | 0.634074 | 5_4:+5791009 | Msa0832700:CDS |
| AATGTGGGTGGAGCTGCTGG+CGG | 0.634893 | 5_4:+5791403 | Msa0832700:CDS |
| GGAAAATGTAGTGCTTAATG+TGG | 0.635559 | 5_4:+5791387 | Msa0832700:CDS |
| TTGAACCGGAGAGAGAGGAA+CGG | 0.637385 | 5_4:+5791536 | Msa0832700:CDS |
| AATGTAGTGCTTAATGTGGG+TGG | 0.639772 | 5_4:+5791391 | Msa0832700:CDS |
| ATGACACCCATGTTTGAACA+TGG | 0.639922 | 5_4:+5791767 | Msa0832700:three_prime_UTR |
| GAAAATGTAGTGCTTAATGT+GGG | 0.644997 | 5_4:+5791388 | Msa0832700:CDS |
| CGTCATTAGCAAATTCCCAC+CGG | 0.646656 | 5_4:-5790886 | None:intergenic |
| GACGAGTTTGATGGAACCAG+AGG | 0.648812 | 5_4:+5791441 | Msa0832700:CDS |
| CCAAACAGCTTAGGAACATG+AGG | 0.651312 | 5_4:-5791472 | None:intergenic |
| CATAATCCAAATTCCAAACA+CGG | 0.652013 | 5_4:-5791721 | None:intergenic |
| TCAGAAGAAGAAACTGCCAC+CGG | 0.654949 | 5_4:-5790205 | None:intergenic |
| TGGGCTTAAACGATGTAGGA+CGG | 0.657843 | 5_4:+5791504 | Msa0832700:CDS |
| TCCTCGATCAGTCTCCTGCG+AGG | 0.667916 | 5_4:-5791605 | None:intergenic |
| AGGAACAGCTATGGCGACAG+CGG | 0.668564 | 5_4:+5790973 | Msa0832700:CDS |
| GGGGCGTGGTTGTAACAGAA+GGG | 0.668865 | 5_4:+5791320 | Msa0832700:CDS |
| AAGGAGCGTGTGTGTTGGTG+GGG | 0.675490 | 5_4:-5790115 | None:intergenic |
| GTTGATGGCGACATTACCGG+TGG | 0.679162 | 5_4:+5790502 | Msa0832700:exon |
| GCTAATGACGGATTTCGACG+AGG | 0.685443 | 5_4:+5790899 | Msa0832700:CDS |
| TGTTAGCCATGTTCAAACAT+GGG | 0.695320 | 5_4:-5791773 | None:intergenic |
| GTGAAATCTGAACCTCGTGA+TGG | 0.700758 | 5_4:+5791634 | Msa0832700:CDS |
| CCATCACCATCACCATCACG+AGG | 0.701913 | 5_4:-5791646 | None:intergenic |
| TAGCTGGTGTCATTGGACAA+GGG | 0.714141 | 5_4:+5791801 | Msa0832700:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTATGATGTTAAATA+TGG | - | chr5_4:5790409-5790428 | None:intergenic | 10.0% |
| !! | AATTATTATGATGTTAAATA+TGG | - | chr5_4:5790409-5790428 | None:intergenic | 10.0% |
| !! | ATAGATTATTAGATTAGAAT+AGG | + | chr5_4:5790379-5790398 | Msa0832700:intron | 15.0% |
| !!! | CATAATAATTTTGTTTGATT+AGG | + | chr5_4:5790419-5790438 | Msa0832700:intron | 15.0% |
| !! | AAAAAAGAAAGTAAAACAAA+AGG | - | chr5_4:5790803-5790822 | None:intergenic | 15.0% |
| !!! | TTTGTTTTACTTTCTTTTTT+AGG | + | chr5_4:5790803-5790822 | Msa0832700:intron | 15.0% |
| !!! | TAAATTTTGTGTTTATTTCT+AGG | + | chr5_4:5790841-5790860 | Msa0832700:intron | 15.0% |
| !!! | AAATTTTGTGTTTATTTCTA+GGG | + | chr5_4:5790842-5790861 | Msa0832700:intron | 15.0% |
| !! | AATACTATAATTATGTTACT+TGG | - | chr5_4:5792214-5792233 | None:intergenic | 15.0% |
| !! | ATAGATTATTAGATTAGAAT+AGG | + | chr5_4:5790379-5790398 | Msa0832700:intron | 15.0% |
| !!! | CATAATAATTTTGTTTGATT+AGG | + | chr5_4:5790419-5790438 | Msa0832700:intron | 15.0% |
| !! | AAAAAAGAAAGTAAAACAAA+AGG | - | chr5_4:5790803-5790822 | None:intergenic | 15.0% |
| !!! | TTTGTTTTACTTTCTTTTTT+AGG | + | chr5_4:5790803-5790822 | Msa0832700:intron | 15.0% |
| !!! | TAAATTTTGTGTTTATTTCT+AGG | + | chr5_4:5790841-5790860 | Msa0832700:intron | 15.0% |
| !!! | AAATTTTGTGTTTATTTCTA+GGG | + | chr5_4:5790842-5790861 | Msa0832700:intron | 15.0% |
| !! | AATACTATAATTATGTTACT+TGG | - | chr5_4:5792214-5792233 | None:intergenic | 15.0% |
| !! | ACAAAGTATGATATTAACTA+AGG | - | chr5_4:5790320-5790339 | None:intergenic | 20.0% |
| !! | ATGAACTAGATACAAAAATT+AGG | + | chr5_4:5790450-5790469 | Msa0832700:five_prime_UTR | 20.0% |
| !! | TGAACTAGATACAAAAATTA+GGG | + | chr5_4:5790451-5790470 | Msa0832700:five_prime_UTR | 20.0% |
| !!! | TTATTGTGTTTGAAATACTT+TGG | - | chr5_4:5790701-5790720 | None:intergenic | 20.0% |
| !! | ACAAAGTATGATATTAACTA+AGG | - | chr5_4:5790320-5790339 | None:intergenic | 20.0% |
| !! | ATGAACTAGATACAAAAATT+AGG | + | chr5_4:5790450-5790469 | Msa0832700:five_prime_UTR | 20.0% |
| !! | TGAACTAGATACAAAAATTA+GGG | + | chr5_4:5790451-5790470 | Msa0832700:five_prime_UTR | 20.0% |
| !!! | TTATTGTGTTTGAAATACTT+TGG | - | chr5_4:5790701-5790720 | None:intergenic | 20.0% |
| ! | TATACTAAGCATGCATAATA+CGG | - | chr5_4:5790356-5790375 | None:intergenic | 25.0% |
| ! | ACAAAAATTAGGGTGTAATT+AGG | + | chr5_4:5790461-5790480 | Msa0832700:five_prime_UTR | 25.0% |
| ! | TCTAATTTGATACATGTACT+AGG | + | chr5_4:5792158-5792177 | Msa0832700:three_prime_UTR | 25.0% |
| ! | TATACTAAGCATGCATAATA+CGG | - | chr5_4:5790356-5790375 | None:intergenic | 25.0% |
| ! | ACAAAAATTAGGGTGTAATT+AGG | + | chr5_4:5790461-5790480 | Msa0832700:five_prime_UTR | 25.0% |
| ! | TCTAATTTGATACATGTACT+AGG | + | chr5_4:5792158-5792177 | Msa0832700:three_prime_UTR | 25.0% |
| TGAAATATTCTAACCGGAAA+CGG | - | chr5_4:5790233-5790252 | None:intergenic | 30.0% | |
| ATGCGTTGAAATATTCTAAC+CGG | - | chr5_4:5790239-5790258 | None:intergenic | 30.0% | |
| ATTGTTTACCTTGAAAGAGA+TGG | - | chr5_4:5790263-5790282 | None:intergenic | 30.0% | |
| !! | GTGTTTATTTCTAGGGATTT+CGG | + | chr5_4:5790849-5790868 | Msa0832700:intron | 30.0% |
| TAATACTGTAACAGTAGCTA+TGG | + | chr5_4:5791006-5791025 | Msa0832700:CDS | 30.0% | |
| AGTTAGTTGAAGAGAATGAA+AGG | + | chr5_4:5791158-5791177 | Msa0832700:CDS | 30.0% | |
| AATGAGCTAAGTCAATTGAA+AGG | + | chr5_4:5791208-5791227 | Msa0832700:CDS | 30.0% | |
| ATGATGAGTAATTATGCTTC+TGG | + | chr5_4:5791253-5791272 | Msa0832700:CDS | 30.0% | |
| ! | TGTAACAGAAGGGAAAATTT+TGG | + | chr5_4:5791330-5791349 | Msa0832700:CDS | 30.0% |
| ! | TTTTGGATCTTTTGCCTATA+AGG | + | chr5_4:5791347-5791366 | Msa0832700:CDS | 30.0% |
| GCTAATGAAACATTCCTTAT+AGG | - | chr5_4:5791364-5791383 | None:intergenic | 30.0% | |
| GAAAATGTAGTGCTTAATGT+GGG | + | chr5_4:5791388-5791407 | Msa0832700:CDS | 30.0% | |
| AATTGACGAAATAGTGGTAA+AGG | + | chr5_4:5791698-5791717 | Msa0832700:exon | 30.0% | |
| CATAATCCAAATTCCAAACA+CGG | - | chr5_4:5791724-5791743 | None:intergenic | 30.0% | |
| ! | GTTTGGAATTTGGATTATGT+CGG | + | chr5_4:5791725-5791744 | Msa0832700:three_prime_UTR | 30.0% |
| ! | TTTGGAATTTGGATTATGTC+GGG | + | chr5_4:5791726-5791745 | Msa0832700:three_prime_UTR | 30.0% |
| !! | GGTGTCATGTTTCAAATTTT+AGG | - | chr5_4:5791755-5791774 | None:intergenic | 30.0% |
| TCTTTCTCTAAGCAAAATTG+TGG | - | chr5_4:5791978-5791997 | None:intergenic | 30.0% | |
| ! | ATGTTACTTGGAAACAAAGT+TGG | - | chr5_4:5792202-5792221 | None:intergenic | 30.0% |
| TGAAATATTCTAACCGGAAA+CGG | - | chr5_4:5790233-5790252 | None:intergenic | 30.0% | |
| ATGCGTTGAAATATTCTAAC+CGG | - | chr5_4:5790239-5790258 | None:intergenic | 30.0% | |
| ATTGTTTACCTTGAAAGAGA+TGG | - | chr5_4:5790263-5790282 | None:intergenic | 30.0% | |
| !! | GTGTTTATTTCTAGGGATTT+CGG | + | chr5_4:5790849-5790868 | Msa0832700:intron | 30.0% |
| TAATACTGTAACAGTAGCTA+TGG | + | chr5_4:5791006-5791025 | Msa0832700:CDS | 30.0% | |
| AGTTAGTTGAAGAGAATGAA+AGG | + | chr5_4:5791158-5791177 | Msa0832700:CDS | 30.0% | |
| AATGAGCTAAGTCAATTGAA+AGG | + | chr5_4:5791208-5791227 | Msa0832700:CDS | 30.0% | |
| ATGATGAGTAATTATGCTTC+TGG | + | chr5_4:5791253-5791272 | Msa0832700:CDS | 30.0% | |
| ! | TGTAACAGAAGGGAAAATTT+TGG | + | chr5_4:5791330-5791349 | Msa0832700:CDS | 30.0% |
| ! | TTTTGGATCTTTTGCCTATA+AGG | + | chr5_4:5791347-5791366 | Msa0832700:CDS | 30.0% |
| GCTAATGAAACATTCCTTAT+AGG | - | chr5_4:5791364-5791383 | None:intergenic | 30.0% | |
| GAAAATGTAGTGCTTAATGT+GGG | + | chr5_4:5791388-5791407 | Msa0832700:CDS | 30.0% | |
| AATTGACGAAATAGTGGTAA+AGG | + | chr5_4:5791698-5791717 | Msa0832700:exon | 30.0% | |
| CATAATCCAAATTCCAAACA+CGG | - | chr5_4:5791724-5791743 | None:intergenic | 30.0% | |
| ! | GTTTGGAATTTGGATTATGT+CGG | + | chr5_4:5791725-5791744 | Msa0832700:three_prime_UTR | 30.0% |
| ! | TTTGGAATTTGGATTATGTC+GGG | + | chr5_4:5791726-5791745 | Msa0832700:three_prime_UTR | 30.0% |
| !! | GGTGTCATGTTTCAAATTTT+AGG | - | chr5_4:5791755-5791774 | None:intergenic | 30.0% |
| TCTTTCTCTAAGCAAAATTG+TGG | - | chr5_4:5791978-5791997 | None:intergenic | 30.0% | |
| ! | ATGTTACTTGGAAACAAAGT+TGG | - | chr5_4:5792202-5792221 | None:intergenic | 30.0% |
| AGGAGAGGATAGGAATAAAA+AGG | - | chr5_4:5790137-5790156 | None:intergenic | 35.0% | |
| ! | AGAGATTCTAGAAGTTTCGA+AGG | - | chr5_4:5790157-5790176 | None:intergenic | 35.0% |
| AGATCTGGAAAAGAAGTTGA+TGG | + | chr5_4:5790487-5790506 | Msa0832700:exon | 35.0% | |
| ! | TGATACGTTTTCGTCAGAAA+CGG | - | chr5_4:5790578-5790597 | None:intergenic | 35.0% |
| !! | TGATTCTTCCGTTGATGATT+TGG | + | chr5_4:5790607-5790626 | Msa0832700:CDS | 35.0% |
| CCATGAAACCAAATCATCAA+CGG | - | chr5_4:5790618-5790637 | None:intergenic | 35.0% | |
| TTGGTTTCATGGAATGAAGA+TGG | + | chr5_4:5790626-5790645 | Msa0832700:CDS | 35.0% | |
| ATGGAACAAGCTTCATAGTT+TGG | + | chr5_4:5790645-5790664 | Msa0832700:CDS | 35.0% | |
| AAATCTCTAGCAAATTCAGC+AGG | - | chr5_4:5790674-5790693 | None:intergenic | 35.0% | |
| ATTTGCTTCGAGATATTCAG+CGG | + | chr5_4:5790930-5790949 | Msa0832700:CDS | 35.0% | |
| TCATTCTCTTCAACTAACTC+CGG | - | chr5_4:5791157-5791176 | None:intergenic | 35.0% | |
| AAGGAATGTTTCATTAGCTG+AGG | + | chr5_4:5791366-5791385 | Msa0832700:CDS | 35.0% | |
| GGAAAATGTAGTGCTTAATG+TGG | + | chr5_4:5791387-5791406 | Msa0832700:CDS | 35.0% | |
| GTTGGAAATTGACGAAATAG+TGG | + | chr5_4:5791692-5791711 | Msa0832700:CDS | 35.0% | |
| TGTTAGCCATGTTCAAACAT+GGG | - | chr5_4:5791776-5791795 | None:intergenic | 35.0% | |
| ! | TCCTTTTTAGACATGCTTGT+GGG | + | chr5_4:5792069-5792088 | Msa0832700:three_prime_UTR | 35.0% |
| AGGAGAGGATAGGAATAAAA+AGG | - | chr5_4:5790137-5790156 | None:intergenic | 35.0% | |
| ! | AGAGATTCTAGAAGTTTCGA+AGG | - | chr5_4:5790157-5790176 | None:intergenic | 35.0% |
| AGATCTGGAAAAGAAGTTGA+TGG | + | chr5_4:5790487-5790506 | Msa0832700:exon | 35.0% | |
| ! | TGATACGTTTTCGTCAGAAA+CGG | - | chr5_4:5790578-5790597 | None:intergenic | 35.0% |
| !! | TGATTCTTCCGTTGATGATT+TGG | + | chr5_4:5790607-5790626 | Msa0832700:CDS | 35.0% |
| CCATGAAACCAAATCATCAA+CGG | - | chr5_4:5790618-5790637 | None:intergenic | 35.0% | |
| TTGGTTTCATGGAATGAAGA+TGG | + | chr5_4:5790626-5790645 | Msa0832700:CDS | 35.0% | |
| ATGGAACAAGCTTCATAGTT+TGG | + | chr5_4:5790645-5790664 | Msa0832700:CDS | 35.0% | |
| AAATCTCTAGCAAATTCAGC+AGG | - | chr5_4:5790674-5790693 | None:intergenic | 35.0% | |
| ATTTGCTTCGAGATATTCAG+CGG | + | chr5_4:5790930-5790949 | Msa0832700:CDS | 35.0% | |
| TCATTCTCTTCAACTAACTC+CGG | - | chr5_4:5791157-5791176 | None:intergenic | 35.0% | |
| AAGGAATGTTTCATTAGCTG+AGG | + | chr5_4:5791366-5791385 | Msa0832700:CDS | 35.0% | |
| GGAAAATGTAGTGCTTAATG+TGG | + | chr5_4:5791387-5791406 | Msa0832700:CDS | 35.0% | |
| GTTGGAAATTGACGAAATAG+TGG | + | chr5_4:5791692-5791711 | Msa0832700:CDS | 35.0% | |
| TGTTAGCCATGTTCAAACAT+GGG | - | chr5_4:5791776-5791795 | None:intergenic | 35.0% | |
| ! | TCCTTTTTAGACATGCTTGT+GGG | + | chr5_4:5792069-5792088 | Msa0832700:three_prime_UTR | 35.0% |
| ! | ATAAAAAGGAGCGTGTGTGT+TGG | - | chr5_4:5790123-5790142 | None:intergenic | 40.0% |
| ! | TTCTAGAAGTTTCGAAGGAG+AGG | - | chr5_4:5790152-5790171 | None:intergenic | 40.0% |
| AACGCATTCCATCTCTTTCA+AGG | + | chr5_4:5790252-5790271 | Msa0832700:five_prime_UTR | 40.0% | |
| GGTGTAATTAGGAACAGATC+TGG | + | chr5_4:5790472-5790491 | Msa0832700:five_prime_UTR | 40.0% | |
| !! | CCGTTGATGATTTGGTTTCA+TGG | + | chr5_4:5790615-5790634 | Msa0832700:CDS | 40.0% |
| !! | ATTGAGTTGACGAACGAAAC+TGG | - | chr5_4:5790729-5790748 | None:intergenic | 40.0% |
| TCAGCGGAGAAAAATATTGC+CGG | + | chr5_4:5790946-5790965 | Msa0832700:CDS | 40.0% | |
| TACTGTAACAGTAGCTATGG+CGG | + | chr5_4:5791009-5791028 | Msa0832700:CDS | 40.0% | |
| AATGTAGTGCTTAATGTGGG+TGG | + | chr5_4:5791391-5791410 | Msa0832700:CDS | 40.0% | |
| CTCATGTTCCTAAGCTGTTT+GGG | + | chr5_4:5791473-5791492 | Msa0832700:CDS | 40.0% | |
| TCATGTTCCTAAGCTGTTTG+GGG | + | chr5_4:5791474-5791493 | Msa0832700:CDS | 40.0% | |
| ATTGAAACCCCAAACAGCTT+AGG | - | chr5_4:5791484-5791503 | None:intergenic | 40.0% | |
| ! | AAGCTGTTTGGGGTTTCAAT+TGG | + | chr5_4:5791484-5791503 | Msa0832700:CDS | 40.0% |
| ! | AGCTGTTTGGGGTTTCAATT+GGG | + | chr5_4:5791485-5791504 | Msa0832700:CDS | 40.0% |
| CAATTGGGCTTAAACGATGT+AGG | + | chr5_4:5791500-5791519 | Msa0832700:CDS | 40.0% | |
| ! | TAAAGGCCGTGTTTGGAATT+TGG | + | chr5_4:5791715-5791734 | Msa0832700:three_prime_UTR | 40.0% |
| ATGACACCCATGTTTGAACA+TGG | + | chr5_4:5791767-5791786 | Msa0832700:three_prime_UTR | 40.0% | |
| CTGTTAGCCATGTTCAAACA+TGG | - | chr5_4:5791777-5791796 | None:intergenic | 40.0% | |
| ! | GTCCTTTTTAGACATGCTTG+TGG | + | chr5_4:5792068-5792087 | Msa0832700:three_prime_UTR | 40.0% |
| TCCCACAAGCATGTCTAAAA+AGG | - | chr5_4:5792073-5792092 | None:intergenic | 40.0% | |
| ! | GGAAACAAAGTTGGTCCATA+GGG | - | chr5_4:5792193-5792212 | None:intergenic | 40.0% |
| ! | TGGAAACAAAGTTGGTCCAT+AGG | - | chr5_4:5792194-5792213 | None:intergenic | 40.0% |
| ! | ATAAAAAGGAGCGTGTGTGT+TGG | - | chr5_4:5790123-5790142 | None:intergenic | 40.0% |
| ! | TTCTAGAAGTTTCGAAGGAG+AGG | - | chr5_4:5790152-5790171 | None:intergenic | 40.0% |
| AACGCATTCCATCTCTTTCA+AGG | + | chr5_4:5790252-5790271 | Msa0832700:five_prime_UTR | 40.0% | |
| GGTGTAATTAGGAACAGATC+TGG | + | chr5_4:5790472-5790491 | Msa0832700:five_prime_UTR | 40.0% | |
| !! | CCGTTGATGATTTGGTTTCA+TGG | + | chr5_4:5790615-5790634 | Msa0832700:CDS | 40.0% |
| !! | ATTGAGTTGACGAACGAAAC+TGG | - | chr5_4:5790729-5790748 | None:intergenic | 40.0% |
| TCAGCGGAGAAAAATATTGC+CGG | + | chr5_4:5790946-5790965 | Msa0832700:CDS | 40.0% | |
| TACTGTAACAGTAGCTATGG+CGG | + | chr5_4:5791009-5791028 | Msa0832700:CDS | 40.0% | |
| AATGTAGTGCTTAATGTGGG+TGG | + | chr5_4:5791391-5791410 | Msa0832700:CDS | 40.0% | |
| CTCATGTTCCTAAGCTGTTT+GGG | + | chr5_4:5791473-5791492 | Msa0832700:CDS | 40.0% | |
| TCATGTTCCTAAGCTGTTTG+GGG | + | chr5_4:5791474-5791493 | Msa0832700:CDS | 40.0% | |
| ATTGAAACCCCAAACAGCTT+AGG | - | chr5_4:5791484-5791503 | None:intergenic | 40.0% | |
| ! | AAGCTGTTTGGGGTTTCAAT+TGG | + | chr5_4:5791484-5791503 | Msa0832700:CDS | 40.0% |
| ! | AGCTGTTTGGGGTTTCAATT+GGG | + | chr5_4:5791485-5791504 | Msa0832700:CDS | 40.0% |
| CAATTGGGCTTAAACGATGT+AGG | + | chr5_4:5791500-5791519 | Msa0832700:CDS | 40.0% | |
| ! | TAAAGGCCGTGTTTGGAATT+TGG | + | chr5_4:5791715-5791734 | Msa0832700:three_prime_UTR | 40.0% |
| ATGACACCCATGTTTGAACA+TGG | + | chr5_4:5791767-5791786 | Msa0832700:three_prime_UTR | 40.0% | |
| CTGTTAGCCATGTTCAAACA+TGG | - | chr5_4:5791777-5791796 | None:intergenic | 40.0% | |
| ! | GTCCTTTTTAGACATGCTTG+TGG | + | chr5_4:5792068-5792087 | Msa0832700:three_prime_UTR | 40.0% |
| TCCCACAAGCATGTCTAAAA+AGG | - | chr5_4:5792073-5792092 | None:intergenic | 40.0% | |
| ! | GGAAACAAAGTTGGTCCATA+GGG | - | chr5_4:5792193-5792212 | None:intergenic | 40.0% |
| ! | TGGAAACAAAGTTGGTCCAT+AGG | - | chr5_4:5792194-5792213 | None:intergenic | 40.0% |
| GAAGTTTCGAAGGAGAGGAT+AGG | - | chr5_4:5790147-5790166 | None:intergenic | 45.0% | |
| TCAGAAGAAGAAACTGCCAC+CGG | - | chr5_4:5790208-5790227 | None:intergenic | 45.0% | |
| TCTTCTTCTGACTCCGTTTC+CGG | + | chr5_4:5790217-5790236 | Msa0832700:five_prime_UTR | 45.0% | |
| !! | GAAGTTGATGGCGACATTAC+CGG | + | chr5_4:5790499-5790518 | Msa0832700:exon | 45.0% |
| TTCGGAAAGTTGTACCTGAC+CGG | + | chr5_4:5790867-5790886 | Msa0832700:CDS | 45.0% | |
| CGTCATTAGCAAATTCCCAC+CGG | - | chr5_4:5790889-5790908 | None:intergenic | 45.0% | |
| !! | CGGTGGGAATTTGCTAATGA+CGG | + | chr5_4:5790887-5790906 | Msa0832700:CDS | 45.0% |
| AGAAAAATATTGCCGGCAGC+AGG | + | chr5_4:5790953-5790972 | Msa0832700:CDS | 45.0% | |
| TGTTCATCACCAGAAGTTGC+TGG | - | chr5_4:5791055-5791074 | None:intergenic | 45.0% | |
| ! | AGCAACTTCTGGTGATGAAC+AGG | + | chr5_4:5791054-5791073 | Msa0832700:CDS | 45.0% |
| ! | AACTTCTGGTGATGAACAGG+TGG | + | chr5_4:5791057-5791076 | Msa0832700:CDS | 45.0% |
| GTCGAATTCATCTCCGATTG+CGG | + | chr5_4:5791084-5791103 | Msa0832700:CDS | 45.0% | |
| ATCAAACTCGTCGTCTCACA+TGG | - | chr5_4:5791433-5791452 | None:intergenic | 45.0% | |
| ATGTGAGACGACGAGTTTGA+TGG | + | chr5_4:5791432-5791451 | Msa0832700:CDS | 45.0% | |
| TTTGATGGAACCAGAGGTTG+AGG | + | chr5_4:5791447-5791466 | Msa0832700:CDS | 45.0% | |
| CCAAACAGCTTAGGAACATG+AGG | - | chr5_4:5791475-5791494 | None:intergenic | 45.0% | |
| CCTCATGTTCCTAAGCTGTT+TGG | + | chr5_4:5791472-5791491 | Msa0832700:CDS | 45.0% | |
| TGGGCTTAAACGATGTAGGA+CGG | + | chr5_4:5791504-5791523 | Msa0832700:CDS | 45.0% | |
| GTGAAATCTGAACCTCGTGA+TGG | + | chr5_4:5791634-5791653 | Msa0832700:CDS | 45.0% | |
| ATAGTGGTAAAGGCCGTGTT+TGG | + | chr5_4:5791708-5791727 | Msa0832700:exon | 45.0% | |
| !! | TAGCTGGTGTCATTGGACAA+GGG | + | chr5_4:5791801-5791820 | Msa0832700:three_prime_UTR | 45.0% |
| ! | AACAAAGTTGGTCCATAGGG+TGG | - | chr5_4:5792190-5792209 | None:intergenic | 45.0% |
| GAAGTTTCGAAGGAGAGGAT+AGG | - | chr5_4:5790147-5790166 | None:intergenic | 45.0% | |
| TCAGAAGAAGAAACTGCCAC+CGG | - | chr5_4:5790208-5790227 | None:intergenic | 45.0% | |
| TCTTCTTCTGACTCCGTTTC+CGG | + | chr5_4:5790217-5790236 | Msa0832700:five_prime_UTR | 45.0% | |
| !! | GAAGTTGATGGCGACATTAC+CGG | + | chr5_4:5790499-5790518 | Msa0832700:exon | 45.0% |
| TTCGGAAAGTTGTACCTGAC+CGG | + | chr5_4:5790867-5790886 | Msa0832700:CDS | 45.0% | |
| CGTCATTAGCAAATTCCCAC+CGG | - | chr5_4:5790889-5790908 | None:intergenic | 45.0% | |
| !! | CGGTGGGAATTTGCTAATGA+CGG | + | chr5_4:5790887-5790906 | Msa0832700:CDS | 45.0% |
| AGAAAAATATTGCCGGCAGC+AGG | + | chr5_4:5790953-5790972 | Msa0832700:CDS | 45.0% | |
| TGTTCATCACCAGAAGTTGC+TGG | - | chr5_4:5791055-5791074 | None:intergenic | 45.0% | |
| ! | AGCAACTTCTGGTGATGAAC+AGG | + | chr5_4:5791054-5791073 | Msa0832700:CDS | 45.0% |
| ! | AACTTCTGGTGATGAACAGG+TGG | + | chr5_4:5791057-5791076 | Msa0832700:CDS | 45.0% |
| GTCGAATTCATCTCCGATTG+CGG | + | chr5_4:5791084-5791103 | Msa0832700:CDS | 45.0% | |
| ATCAAACTCGTCGTCTCACA+TGG | - | chr5_4:5791433-5791452 | None:intergenic | 45.0% | |
| ATGTGAGACGACGAGTTTGA+TGG | + | chr5_4:5791432-5791451 | Msa0832700:CDS | 45.0% | |
| TTTGATGGAACCAGAGGTTG+AGG | + | chr5_4:5791447-5791466 | Msa0832700:CDS | 45.0% | |
| CCAAACAGCTTAGGAACATG+AGG | - | chr5_4:5791475-5791494 | None:intergenic | 45.0% | |
| CCTCATGTTCCTAAGCTGTT+TGG | + | chr5_4:5791472-5791491 | Msa0832700:CDS | 45.0% | |
| TGGGCTTAAACGATGTAGGA+CGG | + | chr5_4:5791504-5791523 | Msa0832700:CDS | 45.0% | |
| GTGAAATCTGAACCTCGTGA+TGG | + | chr5_4:5791634-5791653 | Msa0832700:CDS | 45.0% | |
| ATAGTGGTAAAGGCCGTGTT+TGG | + | chr5_4:5791708-5791727 | Msa0832700:exon | 45.0% | |
| !! | TAGCTGGTGTCATTGGACAA+GGG | + | chr5_4:5791801-5791820 | Msa0832700:three_prime_UTR | 45.0% |
| ! | AACAAAGTTGGTCCATAGGG+TGG | - | chr5_4:5792190-5792209 | None:intergenic | 45.0% |
| !! | AAATTAATTAATTGATTATA+TGG | - | chr5_4:5790296-5790315 | None:intergenic | 5.0% |
| !! | AAATTAATTAATTGATTATA+TGG | - | chr5_4:5790296-5790315 | None:intergenic | 5.0% |
| ! | AAAGGAGCGTGTGTGTTGGT+GGG | - | chr5_4:5790119-5790138 | None:intergenic | 50.0% |
| ! | AAAAGGAGCGTGTGTGTTGG+TGG | - | chr5_4:5790120-5790139 | None:intergenic | 50.0% |
| ACATTACCGGTGGAGCAAAC+AGG | + | chr5_4:5790512-5790531 | Msa0832700:CDS | 50.0% | |
| GATTCACCTGTTTGCTCCAC+CGG | - | chr5_4:5790521-5790540 | None:intergenic | 50.0% | |
| GGTGGAGCAAACAGGTGAAT+CGG | + | chr5_4:5790520-5790539 | Msa0832700:CDS | 50.0% | |
| ! | GTTTTCGTCAGAAACGGCGT+CGG | - | chr5_4:5790572-5790591 | None:intergenic | 50.0% |
| GAAAGTTGTACCTGACCGGT+GGG | + | chr5_4:5790871-5790890 | Msa0832700:CDS | 50.0% | |
| TTAGCAAATTCCCACCGGTC+AGG | - | chr5_4:5790884-5790903 | None:intergenic | 50.0% | |
| !! | GCTAATGACGGATTTCGACG+AGG | + | chr5_4:5790899-5790918 | Msa0832700:CDS | 50.0% |
| GCTGGAGACACCATTCTAAC+CGG | - | chr5_4:5791037-5791056 | None:intergenic | 50.0% | |
| ATGGTGTCTCCAGCAACTTC+TGG | + | chr5_4:5791043-5791062 | Msa0832700:CDS | 50.0% | |
| TCTCCGATTGCGGTGAACAA+TGG | + | chr5_4:5791094-5791113 | Msa0832700:CDS | 50.0% | |
| GCACCATTGTTCACCGCAAT+CGG | - | chr5_4:5791100-5791119 | None:intergenic | 50.0% | |
| ! | ATCTTCTACGAGTGCTGCGA+CGG | + | chr5_4:5791294-5791313 | Msa0832700:CDS | 50.0% |
| GACGAGTTTGATGGAACCAG+AGG | + | chr5_4:5791441-5791460 | Msa0832700:CDS | 50.0% | |
| ACGATGTAGGACGGAGAATG+AGG | + | chr5_4:5791513-5791532 | Msa0832700:CDS | 50.0% | |
| GACGGAGAATGAGGTTGAAC+CGG | + | chr5_4:5791522-5791541 | Msa0832700:CDS | 50.0% | |
| TTGAACCGGAGAGAGAGGAA+CGG | + | chr5_4:5791536-5791555 | Msa0832700:CDS | 50.0% | |
| GATGCAAACACAATCCTCGC+AGG | + | chr5_4:5791591-5791610 | Msa0832700:CDS | 50.0% | |
| ! | TCTGAACCTCGTGATGGTGA+TGG | + | chr5_4:5791640-5791659 | Msa0832700:CDS | 50.0% |
| !! | TGGTGATGGTGATGGTGACT+CGG | + | chr5_4:5791654-5791673 | Msa0832700:CDS | 50.0% |
| CATGGCTAACAGACACTAGC+TGG | + | chr5_4:5791785-5791804 | Msa0832700:three_prime_UTR | 50.0% | |
| !! | CAGACACTAGCTGGTGTCAT+TGG | + | chr5_4:5791794-5791813 | Msa0832700:three_prime_UTR | 50.0% |
| !! | CTAGCTGGTGTCATTGGACA+AGG | + | chr5_4:5791800-5791819 | Msa0832700:three_prime_UTR | 50.0% |
| ACGCTTGCTTGAGCAAAGCA+TGG | - | chr5_4:5791923-5791942 | None:intergenic | 50.0% | |
| ACTAGGATGCTTCCACCCTA+TGG | + | chr5_4:5792175-5792194 | Msa0832700:three_prime_UTR | 50.0% | |
| ! | AAAGGAGCGTGTGTGTTGGT+GGG | - | chr5_4:5790119-5790138 | None:intergenic | 50.0% |
| ! | AAAAGGAGCGTGTGTGTTGG+TGG | - | chr5_4:5790120-5790139 | None:intergenic | 50.0% |
| ACATTACCGGTGGAGCAAAC+AGG | + | chr5_4:5790512-5790531 | Msa0832700:CDS | 50.0% | |
| GATTCACCTGTTTGCTCCAC+CGG | - | chr5_4:5790521-5790540 | None:intergenic | 50.0% | |
| GGTGGAGCAAACAGGTGAAT+CGG | + | chr5_4:5790520-5790539 | Msa0832700:CDS | 50.0% | |
| ! | GTTTTCGTCAGAAACGGCGT+CGG | - | chr5_4:5790572-5790591 | None:intergenic | 50.0% |
| GAAAGTTGTACCTGACCGGT+GGG | + | chr5_4:5790871-5790890 | Msa0832700:CDS | 50.0% | |
| TTAGCAAATTCCCACCGGTC+AGG | - | chr5_4:5790884-5790903 | None:intergenic | 50.0% | |
| !! | GCTAATGACGGATTTCGACG+AGG | + | chr5_4:5790899-5790918 | Msa0832700:CDS | 50.0% |
| GCTGGAGACACCATTCTAAC+CGG | - | chr5_4:5791037-5791056 | None:intergenic | 50.0% | |
| ATGGTGTCTCCAGCAACTTC+TGG | + | chr5_4:5791043-5791062 | Msa0832700:CDS | 50.0% | |
| TCTCCGATTGCGGTGAACAA+TGG | + | chr5_4:5791094-5791113 | Msa0832700:CDS | 50.0% | |
| GCACCATTGTTCACCGCAAT+CGG | - | chr5_4:5791100-5791119 | None:intergenic | 50.0% | |
| ! | ATCTTCTACGAGTGCTGCGA+CGG | + | chr5_4:5791294-5791313 | Msa0832700:CDS | 50.0% |
| GACGAGTTTGATGGAACCAG+AGG | + | chr5_4:5791441-5791460 | Msa0832700:CDS | 50.0% | |
| ACGATGTAGGACGGAGAATG+AGG | + | chr5_4:5791513-5791532 | Msa0832700:CDS | 50.0% | |
| GACGGAGAATGAGGTTGAAC+CGG | + | chr5_4:5791522-5791541 | Msa0832700:CDS | 50.0% | |
| TTGAACCGGAGAGAGAGGAA+CGG | + | chr5_4:5791536-5791555 | Msa0832700:CDS | 50.0% | |
| GATGCAAACACAATCCTCGC+AGG | + | chr5_4:5791591-5791610 | Msa0832700:CDS | 50.0% | |
| ! | TCTGAACCTCGTGATGGTGA+TGG | + | chr5_4:5791640-5791659 | Msa0832700:CDS | 50.0% |
| !! | TGGTGATGGTGATGGTGACT+CGG | + | chr5_4:5791654-5791673 | Msa0832700:CDS | 50.0% |
| CATGGCTAACAGACACTAGC+TGG | + | chr5_4:5791785-5791804 | Msa0832700:three_prime_UTR | 50.0% | |
| !! | CAGACACTAGCTGGTGTCAT+TGG | + | chr5_4:5791794-5791813 | Msa0832700:three_prime_UTR | 50.0% |
| !! | CTAGCTGGTGTCATTGGACA+AGG | + | chr5_4:5791800-5791819 | Msa0832700:three_prime_UTR | 50.0% |
| ACGCTTGCTTGAGCAAAGCA+TGG | - | chr5_4:5791923-5791942 | None:intergenic | 50.0% | |
| ACTAGGATGCTTCCACCCTA+TGG | + | chr5_4:5792175-5792194 | Msa0832700:three_prime_UTR | 50.0% | |
| ! | AAGGAGCGTGTGTGTTGGTG+GGG | - | chr5_4:5790118-5790137 | None:intergenic | 55.0% |
| !! | GTTGATGGCGACATTACCGG+TGG | + | chr5_4:5790502-5790521 | Msa0832700:exon | 55.0% |
| GCAAACAGGTGAATCGGCGA+CGG | + | chr5_4:5790526-5790545 | Msa0832700:CDS | 55.0% | |
| GGAAAGTTGTACCTGACCGG+TGG | + | chr5_4:5790870-5790889 | Msa0832700:CDS | 55.0% | |
| AGGAACAGCTATGGCGACAG+CGG | + | chr5_4:5790973-5790992 | Msa0832700:CDS | 55.0% | |
| AACAGTAGCTATGGCGGCAC+CGG | + | chr5_4:5791015-5791034 | Msa0832700:CDS | 55.0% | |
| !! | TATGGCGGCACCGGTTAGAA+TGG | + | chr5_4:5791024-5791043 | Msa0832700:CDS | 55.0% |
| TTCAACTAACTCCGGCGCAG+TGG | - | chr5_4:5791149-5791168 | None:intergenic | 55.0% | |
| GGGGCGTGGTTGTAACAGAA+GGG | + | chr5_4:5791320-5791339 | Msa0832700:CDS | 55.0% | |
| CTTAATGTGGGTGGAGCTGC+TGG | + | chr5_4:5791400-5791419 | Msa0832700:CDS | 55.0% | |
| ! | ACATGAGGTGCCTCAACCTC+TGG | - | chr5_4:5791460-5791479 | None:intergenic | 55.0% |
| TGAGGTTGAACCGGAGAGAG+AGG | + | chr5_4:5791531-5791550 | Msa0832700:CDS | 55.0% | |
| TGAACCGGAGAGAGAGGAAC+GGG | + | chr5_4:5791537-5791556 | Msa0832700:CDS | 55.0% | |
| TGTTCCCGTTCCTCTCTCTC+CGG | - | chr5_4:5791544-5791563 | None:intergenic | 55.0% | |
| GCAGGAGACTGATCGAGGAT+CGG | + | chr5_4:5791609-5791628 | Msa0832700:CDS | 55.0% | |
| CCATCACCATCACCATCACG+AGG | - | chr5_4:5791649-5791668 | None:intergenic | 55.0% | |
| !! | CCTCGTGATGGTGATGGTGA+TGG | + | chr5_4:5791646-5791665 | Msa0832700:CDS | 55.0% |
| !! | CGGATGATCAAGAGCGTCGT+TGG | + | chr5_4:5791674-5791693 | Msa0832700:CDS | 55.0% |
| ! | AAGGAGCGTGTGTGTTGGTG+GGG | - | chr5_4:5790118-5790137 | None:intergenic | 55.0% |
| !! | GTTGATGGCGACATTACCGG+TGG | + | chr5_4:5790502-5790521 | Msa0832700:exon | 55.0% |
| GCAAACAGGTGAATCGGCGA+CGG | + | chr5_4:5790526-5790545 | Msa0832700:CDS | 55.0% | |
| GGAAAGTTGTACCTGACCGG+TGG | + | chr5_4:5790870-5790889 | Msa0832700:CDS | 55.0% | |
| AGGAACAGCTATGGCGACAG+CGG | + | chr5_4:5790973-5790992 | Msa0832700:CDS | 55.0% | |
| AACAGTAGCTATGGCGGCAC+CGG | + | chr5_4:5791015-5791034 | Msa0832700:CDS | 55.0% | |
| !! | TATGGCGGCACCGGTTAGAA+TGG | + | chr5_4:5791024-5791043 | Msa0832700:CDS | 55.0% |
| TTCAACTAACTCCGGCGCAG+TGG | - | chr5_4:5791149-5791168 | None:intergenic | 55.0% | |
| GGGGCGTGGTTGTAACAGAA+GGG | + | chr5_4:5791320-5791339 | Msa0832700:CDS | 55.0% | |
| CTTAATGTGGGTGGAGCTGC+TGG | + | chr5_4:5791400-5791419 | Msa0832700:CDS | 55.0% | |
| ! | ACATGAGGTGCCTCAACCTC+TGG | - | chr5_4:5791460-5791479 | None:intergenic | 55.0% |
| TGAGGTTGAACCGGAGAGAG+AGG | + | chr5_4:5791531-5791550 | Msa0832700:CDS | 55.0% | |
| TGAACCGGAGAGAGAGGAAC+GGG | + | chr5_4:5791537-5791556 | Msa0832700:CDS | 55.0% | |
| TGTTCCCGTTCCTCTCTCTC+CGG | - | chr5_4:5791544-5791563 | None:intergenic | 55.0% | |
| GCAGGAGACTGATCGAGGAT+CGG | + | chr5_4:5791609-5791628 | Msa0832700:CDS | 55.0% | |
| CCATCACCATCACCATCACG+AGG | - | chr5_4:5791649-5791668 | None:intergenic | 55.0% | |
| !! | CCTCGTGATGGTGATGGTGA+TGG | + | chr5_4:5791646-5791665 | Msa0832700:CDS | 55.0% |
| !! | CGGATGATCAAGAGCGTCGT+TGG | + | chr5_4:5791674-5791693 | Msa0832700:CDS | 55.0% |
| GAAGAAACTGCCACCGGCGA+CGG | - | chr5_4:5790202-5790221 | None:intergenic | 60.0% | |
| AACAGGTGAATCGGCGACGG+CGG | + | chr5_4:5790529-5790548 | Msa0832700:CDS | 60.0% | |
| GCCATAGCTGTTCCTGCTGC+CGG | - | chr5_4:5790968-5790987 | None:intergenic | 60.0% | |
| CATGAGTTGCACCACTGCGC+CGG | + | chr5_4:5791135-5791154 | Msa0832700:CDS | 60.0% | |
| CGGGGCGTGGTTGTAACAGA+AGG | + | chr5_4:5791319-5791338 | Msa0832700:CDS | 60.0% | |
| AATGTGGGTGGAGCTGCTGG+CGG | + | chr5_4:5791403-5791422 | Msa0832700:CDS | 60.0% | |
| TCCTCGCAGGAGACTGATCG+AGG | + | chr5_4:5791604-5791623 | Msa0832700:CDS | 60.0% | |
| TCCTCGATCAGTCTCCTGCG+AGG | - | chr5_4:5791608-5791627 | None:intergenic | 60.0% | |
| GAAGAAACTGCCACCGGCGA+CGG | - | chr5_4:5790202-5790221 | None:intergenic | 60.0% | |
| AACAGGTGAATCGGCGACGG+CGG | + | chr5_4:5790529-5790548 | Msa0832700:CDS | 60.0% | |
| GCCATAGCTGTTCCTGCTGC+CGG | - | chr5_4:5790968-5790987 | None:intergenic | 60.0% | |
| CATGAGTTGCACCACTGCGC+CGG | + | chr5_4:5791135-5791154 | Msa0832700:CDS | 60.0% | |
| CGGGGCGTGGTTGTAACAGA+AGG | + | chr5_4:5791319-5791338 | Msa0832700:CDS | 60.0% | |
| AATGTGGGTGGAGCTGCTGG+CGG | + | chr5_4:5791403-5791422 | Msa0832700:CDS | 60.0% | |
| TCCTCGCAGGAGACTGATCG+AGG | + | chr5_4:5791604-5791623 | Msa0832700:CDS | 60.0% | |
| TCCTCGATCAGTCTCCTGCG+AGG | - | chr5_4:5791608-5791627 | None:intergenic | 60.0% | |
| CGCTAACCTAACGCCGTCGC+CGG | + | chr5_4:5790186-5790205 | Msa0832700:five_prime_UTR | 65.0% | |
| TAACCTAACGCCGTCGCCGG+TGG | + | chr5_4:5790189-5790208 | Msa0832700:five_prime_UTR | 65.0% | |
| GCCGGCAGCAGGAACAGCTA+TGG | + | chr5_4:5790964-5790983 | Msa0832700:CDS | 65.0% | |
| ! | CTACGAGTGCTGCGACGGCA+CGG | + | chr5_4:5791299-5791318 | Msa0832700:CDS | 65.0% |
| ! | TACGAGTGCTGCGACGGCAC+GGG | + | chr5_4:5791300-5791319 | Msa0832700:CDS | 65.0% |
| CGCTAACCTAACGCCGTCGC+CGG | + | chr5_4:5790186-5790205 | Msa0832700:five_prime_UTR | 65.0% | |
| TAACCTAACGCCGTCGCCGG+TGG | + | chr5_4:5790189-5790208 | Msa0832700:five_prime_UTR | 65.0% | |
| GCCGGCAGCAGGAACAGCTA+TGG | + | chr5_4:5790964-5790983 | Msa0832700:CDS | 65.0% | |
| ! | CTACGAGTGCTGCGACGGCA+CGG | + | chr5_4:5791299-5791318 | Msa0832700:CDS | 65.0% |
| ! | TACGAGTGCTGCGACGGCAC+GGG | + | chr5_4:5791300-5791319 | Msa0832700:CDS | 65.0% |
| ! | ACGAGTGCTGCGACGGCACG+GGG | + | chr5_4:5791301-5791320 | Msa0832700:CDS | 70.0% |
| ! | ACGAGTGCTGCGACGGCACG+GGG | + | chr5_4:5791301-5791320 | Msa0832700:CDS | 70.0% |
| CTGCCACCGGCGACGGCGTT+AGG | - | chr5_4:5790195-5790214 | None:intergenic | 75.0% | |
| CTGCCACCGGCGACGGCGTT+AGG | - | chr5_4:5790195-5790214 | None:intergenic | 75.0% | |
| ! | TGCTGCGACGGCACGGGGCG+TGG | + | chr5_4:5791306-5791325 | Msa0832700:CDS | 80.0% |
| ! | TGCTGCGACGGCACGGGGCG+TGG | + | chr5_4:5791306-5791325 | Msa0832700:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 5790113 | 5792252 | 5790113 | ID=Msa0832700;Name=Msa0832700 |
| chr5_4 | mRNA | 5790113 | 5792252 | 5790113 | ID=Msa0832700-mRNA-1;Parent=Msa0832700;Name=Msa0832700-mRNA-1;_AED=0.06;_eAED=0.06;_QI=226|1|1|1|0.5|0.33|3|541|365 |
| chr5_4 | exon | 5790113 | 5790273 | 5790113 | ID=Msa0832700-mRNA-1:exon:2507;Parent=Msa0832700-mRNA-1 |
| chr5_4 | exon | 5790441 | 5790754 | 5790441 | ID=Msa0832700-mRNA-1:exon:2508;Parent=Msa0832700-mRNA-1 |
| chr5_4 | exon | 5790863 | 5792252 | 5790863 | ID=Msa0832700-mRNA-1:exon:2509;Parent=Msa0832700-mRNA-1 |
| chr5_4 | five_prime_UTR | 5790113 | 5790273 | 5790113 | ID=Msa0832700-mRNA-1:five_prime_utr;Parent=Msa0832700-mRNA-1 |
| chr5_4 | five_prime_UTR | 5790441 | 5790505 | 5790441 | ID=Msa0832700-mRNA-1:five_prime_utr;Parent=Msa0832700-mRNA-1 |
| chr5_4 | CDS | 5790506 | 5790754 | 5790506 | ID=Msa0832700-mRNA-1:cds;Parent=Msa0832700-mRNA-1 |
| chr5_4 | CDS | 5790863 | 5791711 | 5790863 | ID=Msa0832700-mRNA-1:cds;Parent=Msa0832700-mRNA-1 |
| chr5_4 | three_prime_UTR | 5791712 | 5792252 | 5791712 | ID=Msa0832700-mRNA-1:three_prime_utr;Parent=Msa0832700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
