Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0721230 | XP_003611134.1 | 95.342 | 365 | 11 | 2 | 1 | 365 | 1 | 359 | 0.0 | 709 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0721230 | sp|Q9T0D3|HFB2B_ARATH | 49.573 | 351 | 134 | 7 | 16 | 355 | 51 | 369 | 3.33e-89 | 276 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0721230 | B7FM72 | 95.342 | 365 | 11 | 2 | 1 | 365 | 1 | 359 | 0.0 | 709 |
Gene ID | Type | Classification |
---|---|---|
Msa0721230 | TF | HSF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003220 | Msa0721230 | 0.801759 | 7.737776e-49 | -8.615850e-47 |
Msa0004540 | Msa0721230 | 0.806582 | 7.669737e-50 | -8.615850e-47 |
Msa0010770 | Msa0721230 | 0.816605 | 5.072543e-52 | -8.615850e-47 |
Msa0014830 | Msa0721230 | 0.816356 | 5.768467e-52 | -8.615850e-47 |
Msa0029630 | Msa0721230 | 0.849296 | 3.542183e-60 | -8.615850e-47 |
Msa0038870 | Msa0721230 | 0.826652 | 2.411878e-54 | -8.615850e-47 |
Msa0041690 | Msa0721230 | 0.806777 | 6.977495e-50 | -8.615850e-47 |
Msa0064350 | Msa0721230 | 0.800934 | 1.141667e-48 | -8.615850e-47 |
Msa0068000 | Msa0721230 | 0.803733 | 3.028555e-49 | -8.615850e-47 |
Msa0070430 | Msa0721230 | 0.825391 | 4.807847e-54 | -8.615850e-47 |
Msa0074750 | Msa0721230 | 0.810961 | 8.885960e-51 | -8.615850e-47 |
Msa0077900 | Msa0721230 | 0.805636 | 1.213384e-49 | -8.615850e-47 |
Msa0079920 | Msa0721230 | 0.836623 | 8.396319e-57 | -8.615850e-47 |
Msa0091610 | Msa0721230 | 0.832427 | 9.513849e-56 | -8.615850e-47 |
Msa0103790 | Msa0721230 | 0.810055 | 1.394100e-50 | -8.615850e-47 |
Msa0115370 | Msa0721230 | 0.829147 | 6.056297e-55 | -8.615850e-47 |
Msa0613920 | Msa0721230 | 0.819417 | 1.174186e-52 | -8.615850e-47 |
Msa0614510 | Msa0721230 | 0.806754 | 7.054874e-50 | -8.615850e-47 |
Msa0620230 | Msa0721230 | 0.859558 | 3.806602e-63 | -8.615850e-47 |
Msa0628420 | Msa0721230 | 0.823744 | 1.174531e-53 | -8.615850e-47 |
Msa0628500 | Msa0721230 | 0.823272 | 1.514706e-53 | -8.615850e-47 |
Msa0679100 | Msa0721230 | 0.806903 | 6.561487e-50 | -8.615850e-47 |
Msa0693430 | Msa0721230 | 0.800811 | 1.209889e-48 | -8.615850e-47 |
Msa0697080 | Msa0721230 | 0.828912 | 6.903820e-55 | -8.615850e-47 |
Msa0697720 | Msa0721230 | 0.808905 | 2.461212e-50 | -8.615850e-47 |
Msa0699360 | Msa0721230 | 0.801214 | 1.000864e-48 | -8.615850e-47 |
Msa0708770 | Msa0721230 | 0.801168 | 1.022472e-48 | -8.615850e-47 |
Msa0713820 | Msa0721230 | 0.841881 | 3.629858e-58 | -8.615850e-47 |
Msa0721230 | Msa0734960 | 0.810586 | 1.071115e-50 | -8.615850e-47 |
Msa0721230 | Msa0743530 | 0.825158 | 5.458575e-54 | -8.615850e-47 |
Msa0721230 | Msa0750330 | -0.835187 | 1.941184e-56 | -8.615850e-47 |
Msa0721230 | Msa0752510 | 0.809027 | 2.317405e-50 | -8.615850e-47 |
Msa0721230 | Msa0752700 | 0.821123 | 4.772469e-53 | -8.615850e-47 |
Msa0721230 | Msa0753460 | 0.954434 | 2.984723e-112 | -8.615850e-47 |
Msa0721230 | Msa0756060 | 0.819753 | 9.843030e-53 | -8.615850e-47 |
Msa0721230 | Msa0794970 | 0.820636 | 6.178414e-53 | -8.615850e-47 |
Msa0721230 | Msa0795250 | 0.838400 | 2.941380e-57 | -8.615850e-47 |
Msa0721230 | Msa0797750 | 0.827407 | 1.591859e-54 | -8.615850e-47 |
Msa0721230 | Msa0820200 | 0.807183 | 5.723245e-50 | -8.615850e-47 |
Msa0721230 | Msa0822170 | 0.830807 | 2.385070e-55 | -8.615850e-47 |
Msa0721230 | Msa0822180 | 0.823716 | 1.192214e-53 | -8.615850e-47 |
Msa0721230 | Msa0828680 | 0.806332 | 8.659962e-50 | -8.615850e-47 |
Msa0721230 | Msa0831100 | 0.821274 | 4.404571e-53 | -8.615850e-47 |
Msa0721230 | Msa0832700 | 0.983021 | 1.279746e-156 | -8.615850e-47 |
Msa0721230 | Msa0835280 | 0.830894 | 2.270873e-55 | -8.615850e-47 |
Msa0721230 | Msa0858440 | 0.803857 | 2.853267e-49 | -8.615850e-47 |
Msa0721230 | Msa0880450 | 0.864719 | 9.930136e-65 | -8.615850e-47 |
Msa0721230 | Msa0898660 | 0.830169 | 3.417433e-55 | -8.615850e-47 |
Msa0721230 | Msa0943170 | 0.825505 | 4.519911e-54 | -8.615850e-47 |
Msa0721230 | Msa0947800 | 0.800164 | 1.638329e-48 | -8.615850e-47 |
Msa0721230 | Msa0998590 | 0.824058 | 9.915948e-54 | -8.615850e-47 |
Msa0721230 | Msa1035230 | 0.821838 | 3.262458e-53 | -8.615850e-47 |
Msa0721230 | Msa1036300 | 0.803100 | 4.094927e-49 | -8.615850e-47 |
Msa0721230 | Msa1037510 | 0.832424 | 9.527530e-56 | -8.615850e-47 |
Msa0721230 | Msa1075970 | 0.821179 | 4.634175e-53 | -8.615850e-47 |
Msa0721230 | Msa1113590 | 0.819122 | 1.370796e-52 | -8.615850e-47 |
Msa0721230 | Msa1123350 | 0.836902 | 7.128665e-57 | -8.615850e-47 |
Msa0721230 | Msa1127590 | 0.805654 | 1.202355e-49 | -8.615850e-47 |
Msa0721230 | Msa1130980 | 0.829085 | 6.269866e-55 | -8.615850e-47 |
Msa0721230 | Msa1184370 | 0.802357 | 5.830325e-49 | -8.615850e-47 |
Msa0721230 | Msa1186130 | 0.804251 | 2.363071e-49 | -8.615850e-47 |
Msa0721230 | Msa1204850 | 0.803182 | 3.938306e-49 | -8.615850e-47 |
Msa0721230 | Msa1205590 | 0.823706 | 1.198709e-53 | -8.615850e-47 |
Msa0721230 | Msa1206650 | 0.851650 | 7.730480e-61 | -8.615850e-47 |
Msa0721230 | Msa1227690 | 0.813929 | 1.995547e-51 | -8.615850e-47 |
Msa0721230 | Msa1250530 | 0.805728 | 1.160635e-49 | -8.615850e-47 |
Msa0721230 | Msa1255370 | 0.814686 | 1.357708e-51 | -8.615850e-47 |
Msa0721230 | Msa1255410 | 0.815624 | 8.403517e-52 | -8.615850e-47 |
Msa0721230 | Msa1256470 | 0.801022 | 1.095279e-48 | -8.615850e-47 |
Msa0721230 | Msa1257070 | 0.816377 | 5.706282e-52 | -8.615850e-47 |
Msa0721230 | Msa1259640 | 0.800440 | 1.439648e-48 | -8.615850e-47 |
Msa0721230 | Msa1266020 | 0.817831 | 2.688950e-52 | -8.615850e-47 |
Msa0721230 | Msa1295910 | 0.814395 | 1.574647e-51 | -8.615850e-47 |
Msa0721230 | Msa1307950 | 0.814187 | 1.750239e-51 | -8.615850e-47 |
Msa0721230 | Msa1320820 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
Msa0721230 | Msa1327640 | 0.854277 | 1.370027e-61 | -8.615850e-47 |
Msa0721230 | Msa1344310 | 0.805789 | 1.126505e-49 | -8.615850e-47 |
Msa0721230 | Msa1344850 | 0.814110 | 1.820776e-51 | -8.615850e-47 |
Msa0721230 | Msa1356610 | 0.837063 | 6.483838e-57 | -8.615850e-47 |
Msa0721230 | Msa1362420 | 0.842699 | 2.204765e-58 | -8.615850e-47 |
Msa0721230 | Msa1367590 | 0.816386 | 5.679330e-52 | -8.615850e-47 |
Msa0721230 | Msa1373850 | 0.801324 | 9.499270e-49 | -8.615850e-47 |
Msa0721230 | Msa1376650 | 0.818566 | 1.833059e-52 | -8.615850e-47 |
Msa0721230 | Msa1377800 | 0.822903 | 1.846753e-53 | -8.615850e-47 |
Msa0721230 | Msa1411950 | 0.823468 | 1.362748e-53 | -8.615850e-47 |
Msa0721230 | Msa1416260 | 0.803021 | 4.252595e-49 | -8.615850e-47 |
Msa0721230 | Msa1418340 | 0.831260 | 1.845838e-55 | -8.615850e-47 |
Msa0721230 | Msa1421560 | 0.807025 | 6.183537e-50 | -8.615850e-47 |
Msa0721230 | Msa1450720 | 0.812457 | 4.199633e-51 | -8.615850e-47 |
Msa0721230 | Msa1459960 | 0.811273 | 7.604131e-51 | -8.615850e-47 |
Msa0125450 | Msa0721230 | 0.845603 | 3.663428e-59 | -8.615850e-47 |
Msa0125540 | Msa0721230 | 0.848987 | 4.316084e-60 | -8.615850e-47 |
Msa0130240 | Msa0721230 | 0.804203 | 2.418259e-49 | -8.615850e-47 |
Msa0136120 | Msa0721230 | 0.831022 | 2.111890e-55 | -8.615850e-47 |
Msa0146080 | Msa0721230 | 0.816445 | 5.508694e-52 | -8.615850e-47 |
Msa0147980 | Msa0721230 | 0.800986 | 1.114267e-48 | -8.615850e-47 |
Msa0150260 | Msa0721230 | 0.823825 | 1.124551e-53 | -8.615850e-47 |
Msa0183870 | Msa0721230 | 0.803518 | 3.354711e-49 | -8.615850e-47 |
Msa0185400 | Msa0721230 | 0.800952 | 1.132235e-48 | -8.615850e-47 |
Msa0195630 | Msa0721230 | 0.801313 | 9.551866e-49 | -8.615850e-47 |
Msa0217670 | Msa0721230 | 0.804050 | 2.601890e-49 | -8.615850e-47 |
Msa0237200 | Msa0721230 | 0.825781 | 3.888112e-54 | -8.615850e-47 |
Msa0237410 | Msa0721230 | 0.807605 | 4.657696e-50 | -8.615850e-47 |
Msa0375980 | Msa0721230 | 0.813166 | 2.937224e-51 | -8.615850e-47 |
Msa0376280 | Msa0721230 | 0.807900 | 4.032213e-50 | -8.615850e-47 |
Msa0416960 | Msa0721230 | 0.801552 | 8.530730e-49 | -8.615850e-47 |
Msa0432070 | Msa0721230 | 0.811260 | 7.651187e-51 | -8.615850e-47 |
Msa0434770 | Msa0721230 | 0.801531 | 8.617382e-49 | -8.615850e-47 |
Msa0471690 | Msa0721230 | 0.834808 | 2.418854e-56 | -8.615850e-47 |
Msa0244980 | Msa0721230 | 0.809304 | 2.021293e-50 | -8.615850e-47 |
Msa0257490 | Msa0721230 | 0.806716 | 7.185728e-50 | -8.615850e-47 |
Msa0274970 | Msa0721230 | 0.819914 | 9.042346e-53 | -8.615850e-47 |
Msa0296790 | Msa0721230 | 0.821544 | 3.816730e-53 | -8.615850e-47 |
Msa0315680 | Msa0721230 | 0.815993 | 6.952212e-52 | -8.615850e-47 |
Msa0323560 | Msa0721230 | 0.812401 | 4.318358e-51 | -8.615850e-47 |
Msa0324240 | Msa0721230 | 0.816860 | 4.448108e-52 | -8.615850e-47 |
Msa0336360 | Msa0721230 | 0.825116 | 5.587257e-54 | -8.615850e-47 |
Msa0342290 | Msa0721230 | 0.839074 | 1.969187e-57 | -8.615850e-47 |
Msa0363060 | Msa0721230 | 0.834093 | 3.658013e-56 | -8.615850e-47 |
Msa0363640 | Msa0721230 | 0.832560 | 8.815884e-56 | -8.615850e-47 |
Msa0484290 | Msa0721230 | 0.813336 | 2.695292e-51 | -8.615850e-47 |
Msa0484740 | Msa0721230 | 0.845500 | 3.907332e-59 | -8.615850e-47 |
Msa0491000 | Msa0721230 | 0.808143 | 3.579376e-50 | -8.615850e-47 |
Msa0504780 | Msa0721230 | 0.817306 | 3.531681e-52 | -8.615850e-47 |
Msa0511770 | Msa0721230 | 0.804390 | 2.210798e-49 | -8.615850e-47 |
Msa0524500 | Msa0721230 | 0.820379 | 7.077004e-53 | -8.615850e-47 |
Msa0531250 | Msa0721230 | 0.809258 | 2.068338e-50 | -8.615850e-47 |
Msa0552810 | Msa0721230 | 0.820285 | 7.437853e-53 | -8.615850e-47 |
Msa0556860 | Msa0721230 | 0.800807 | 1.212039e-48 | -8.615850e-47 |
Msa0559790 | Msa0721230 | 0.813899 | 2.026310e-51 | -8.615850e-47 |
Msa0577200 | Msa0721230 | -0.836223 | 1.061467e-56 | -8.615850e-47 |
Msa0581070 | Msa0721230 | 0.815504 | 8.935782e-52 | -8.615850e-47 |
Msa0600450 | Msa0721230 | 0.803071 | 4.151807e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0721230 | MtrunA17_Chr5g0397881 | 95.342 | 365 | 11 | 2 | 1 | 365 | 1 | 359 | 0.0 | 709 |
Msa0721230 | MtrunA17_Chr6g0472421 | 45.745 | 376 | 119 | 14 | 5 | 353 | 7 | 324 | 2.25e-81 | 252 |
Msa0721230 | MtrunA17_Chr1g0203601 | 45.773 | 343 | 117 | 11 | 6 | 347 | 5 | 279 | 2.72e-74 | 232 |
Msa0721230 | MtrunA17_Chr3g0134031 | 46.087 | 230 | 113 | 4 | 1 | 219 | 1 | 230 | 4.67e-60 | 197 |
Msa0721230 | MtrunA17_Chr5g0402291 | 45.490 | 255 | 112 | 7 | 17 | 260 | 2 | 240 | 1.23e-59 | 194 |
Msa0721230 | MtrunA17_Chr5g0441531 | 44.248 | 226 | 101 | 4 | 14 | 239 | 15 | 215 | 5.99e-58 | 189 |
Msa0721230 | MtrunA17_Chr7g0257331 | 44.724 | 199 | 75 | 3 | 18 | 216 | 16 | 179 | 3.48e-48 | 162 |
Msa0721230 | MtrunA17_Chr5g0410881 | 72.000 | 100 | 26 | 1 | 22 | 121 | 30 | 127 | 6.74e-46 | 164 |
Msa0721230 | MtrunA17_Chr8g0375041 | 42.211 | 199 | 85 | 3 | 17 | 215 | 2 | 170 | 9.73e-45 | 154 |
Msa0721230 | MtrunA17_Chr6g0467041 | 60.952 | 105 | 41 | 0 | 24 | 128 | 22 | 126 | 7.22e-43 | 151 |
Msa0721230 | MtrunA17_Chr7g0260331 | 65.957 | 94 | 32 | 0 | 22 | 115 | 47 | 140 | 3.52e-42 | 150 |
Msa0721230 | MtrunA17_Chr1g0185131 | 67.021 | 94 | 31 | 0 | 22 | 115 | 30 | 123 | 5.62e-42 | 149 |
Msa0721230 | MtrunA17_Chr8g0379701 | 64.356 | 101 | 35 | 1 | 15 | 115 | 4 | 103 | 1.26e-41 | 150 |
Msa0721230 | MtrunA17_Chr4g0039891 | 63.265 | 98 | 36 | 0 | 24 | 121 | 12 | 109 | 1.77e-40 | 149 |
Msa0721230 | MtrunA17_Chr4g0047421 | 37.624 | 202 | 89 | 3 | 21 | 218 | 30 | 198 | 2.48e-40 | 141 |
Msa0721230 | MtrunA17_Chr8g0378061 | 60.577 | 104 | 41 | 0 | 25 | 128 | 23 | 126 | 5.06e-40 | 147 |
Msa0721230 | MtrunA17_Chr3g0135831 | 62.500 | 96 | 36 | 0 | 22 | 117 | 44 | 139 | 2.76e-38 | 140 |
Msa0721230 | MtrunA17_Chr4g0071051 | 63.441 | 93 | 34 | 0 | 22 | 114 | 99 | 191 | 5.00e-38 | 141 |
Msa0721230 | MtrunA17_Chr1g0204741 | 63.830 | 94 | 34 | 0 | 22 | 115 | 38 | 131 | 1.21e-37 | 138 |
Msa0721230 | MtrunA17_Chr6g0485571 | 59.184 | 98 | 40 | 0 | 18 | 115 | 5 | 102 | 3.90e-37 | 137 |
Msa0721230 | MtrunA17_Chr2g0330821 | 52.137 | 117 | 56 | 0 | 12 | 128 | 67 | 183 | 7.30e-37 | 136 |
Msa0721230 | MtrunA17_Chr2g0284481 | 51.240 | 121 | 58 | 1 | 11 | 131 | 3 | 122 | 1.39e-36 | 136 |
Msa0721230 | MtrunA17_Chr8g0392001 | 59.140 | 93 | 37 | 1 | 24 | 115 | 22 | 114 | 2.65e-32 | 124 |
Msa0721230 | MtrunA17_Chr1g0179321 | 63.636 | 66 | 24 | 0 | 18 | 83 | 43 | 108 | 2.03e-24 | 96.3 |
Msa0721230 | MtrunA17_Chr4g0023771 | 54.054 | 74 | 32 | 2 | 11 | 83 | 3 | 75 | 3.10e-19 | 82.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0721230 | AT4G11660.1 | 49.573 | 351 | 134 | 7 | 16 | 355 | 51 | 369 | 3.39e-90 | 276 |
Msa0721230 | AT5G62020.1 | 46.302 | 311 | 116 | 8 | 1 | 305 | 1 | 266 | 9.70e-82 | 251 |
Msa0721230 | AT4G36990.1 | 50.242 | 207 | 86 | 3 | 12 | 218 | 2 | 191 | 1.16e-61 | 199 |
Msa0721230 | AT1G46264.1 | 37.248 | 298 | 172 | 5 | 19 | 306 | 29 | 321 | 4.54e-59 | 195 |
Msa0721230 | AT2G41690.1 | 40.930 | 215 | 110 | 2 | 4 | 218 | 20 | 217 | 1.51e-48 | 164 |
Msa0721230 | AT1G32330.1 | 65.289 | 121 | 38 | 2 | 1 | 121 | 16 | 132 | 6.73e-47 | 166 |
Msa0721230 | AT1G32330.2 | 65.289 | 121 | 38 | 2 | 1 | 121 | 16 | 132 | 7.01e-47 | 166 |
Msa0721230 | AT4G17750.1 | 61.667 | 120 | 46 | 0 | 2 | 121 | 30 | 149 | 1.37e-46 | 166 |
Msa0721230 | AT3G02990.1 | 66.355 | 107 | 34 | 2 | 9 | 115 | 10 | 114 | 9.14e-43 | 155 |
Msa0721230 | AT3G22830.1 | 67.347 | 98 | 32 | 0 | 18 | 115 | 55 | 152 | 6.65e-42 | 151 |
Msa0721230 | AT4G13980.1 | 60.000 | 110 | 38 | 1 | 25 | 128 | 24 | 133 | 3.01e-40 | 148 |
Msa0721230 | AT5G16820.1 | 67.708 | 96 | 30 | 1 | 20 | 115 | 24 | 118 | 7.68e-40 | 147 |
Msa0721230 | AT5G16820.2 | 67.708 | 96 | 30 | 1 | 20 | 115 | 24 | 118 | 7.68e-40 | 147 |
Msa0721230 | AT5G43840.1 | 63.830 | 94 | 34 | 0 | 22 | 115 | 17 | 110 | 2.74e-39 | 141 |
Msa0721230 | AT2G26150.1 | 61.702 | 94 | 36 | 0 | 22 | 115 | 42 | 135 | 5.03e-39 | 142 |
Msa0721230 | AT2G26150.4 | 61.702 | 94 | 36 | 0 | 22 | 115 | 42 | 135 | 5.03e-39 | 142 |
Msa0721230 | AT3G63350.1 | 58.763 | 97 | 40 | 0 | 18 | 114 | 22 | 118 | 1.28e-38 | 139 |
Msa0721230 | AT5G03720.2 | 64.211 | 95 | 33 | 1 | 21 | 115 | 53 | 146 | 5.13e-38 | 141 |
Msa0721230 | AT5G03720.1 | 64.211 | 95 | 33 | 1 | 21 | 115 | 53 | 146 | 5.13e-38 | 141 |
Msa0721230 | AT3G51910.1 | 60.215 | 93 | 37 | 0 | 22 | 114 | 27 | 119 | 1.09e-37 | 137 |
Msa0721230 | AT5G54070.1 | 60.638 | 94 | 37 | 0 | 21 | 114 | 68 | 161 | 1.09e-37 | 138 |
Msa0721230 | AT3G24520.1 | 65.217 | 92 | 32 | 0 | 24 | 115 | 17 | 108 | 1.17e-36 | 135 |
Msa0721230 | AT4G18880.1 | 58.824 | 119 | 46 | 2 | 17 | 135 | 9 | 124 | 3.09e-35 | 133 |
Msa0721230 | AT5G45710.3 | 58.621 | 116 | 44 | 3 | 20 | 135 | 10 | 121 | 1.26e-34 | 130 |
Msa0721230 | AT5G45710.1 | 58.621 | 116 | 44 | 3 | 20 | 135 | 10 | 121 | 1.26e-34 | 130 |
Msa0721230 | AT1G67970.1 | 60.215 | 93 | 36 | 1 | 24 | 115 | 19 | 111 | 1.01e-33 | 129 |
Msa0721230 | AT4G18870.1 | 45.263 | 95 | 49 | 1 | 20 | 111 | 139 | 233 | 1.09e-22 | 97.1 |
Msa0721230 | AT4G18870.1 | 47.191 | 89 | 42 | 3 | 25 | 111 | 14 | 99 | 3.53e-20 | 90.1 |
Msa0721230 | AT1G77570.1 | 39.326 | 89 | 49 | 3 | 25 | 109 | 27 | 114 | 3.01e-13 | 67.0 |
Find 131 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATGTTCCTAAGCTGTTT+GGG | 0.212139 | 5_1:-17666401 | Msa0721230:CDS |
TGTAACAGAAGGGAAAATTT+TGG | 0.225929 | 5_1:-17666544 | Msa0721230:CDS |
TCTTCTTCTGACTCCGTTTC+CGG | 0.235189 | 5_1:-17667657 | Msa0721230:five_prime_UTR |
GCTAATGAAACATTCCTTAT+AGG | 0.235307 | 5_1:+17666513 | None:intergenic |
TAAAGGCCGTGTTTGGAATT+TGG | 0.236573 | 5_1:-17666159 | Msa0721230:three_prime_UTR |
GTGTTTATTTCTAGGGATTT+CGG | 0.268121 | 5_1:-17667025 | Msa0721230:intron |
AAGCTGTTTGGGGTTTCAAT+TGG | 0.272470 | 5_1:-17666390 | Msa0721230:CDS |
CCTCATGTTCCTAAGCTGTT+TGG | 0.282001 | 5_1:-17666402 | Msa0721230:CDS |
ATGATGAGTAATTATGCTTC+TGG | 0.326687 | 5_1:-17666621 | Msa0721230:CDS |
ATGGAACAAGCTTCATAGTT+TGG | 0.332696 | 5_1:-17667229 | Msa0721230:CDS |
CCGTTGATGATTTGGTTTCA+TGG | 0.341139 | 5_1:-17667259 | Msa0721230:CDS |
ATTGAGTTGACGAACGAAAC+TGG | 0.358502 | 5_1:+17667148 | None:intergenic |
ATGGTGTCTCCAGCAACTTC+TGG | 0.358649 | 5_1:-17666831 | Msa0721230:CDS |
TGATTCTTCCGTTGATGATT+TGG | 0.364300 | 5_1:-17667267 | Msa0721230:CDS |
AGGAGAGGATAGGAATAAAA+AGG | 0.370793 | 5_1:+17667740 | None:intergenic |
CTGCCACCGGCGACGGCGTT+AGG | 0.374761 | 5_1:+17667682 | None:intergenic |
AACGCATTCCATCTCTTTCA+AGG | 0.375340 | 5_1:-17667622 | Msa0721230:intron |
GAAGTTGATGGCGACATTAC+CGG | 0.375837 | 5_1:-17667375 | Msa0721230:exon |
AGCTGTTTGGGGTTTCAATT+GGG | 0.377393 | 5_1:-17666389 | Msa0721230:CDS |
AGCAACTTCTGGTGATGAAC+AGG | 0.397317 | 5_1:-17666820 | Msa0721230:CDS |
TTATTGTGTTTGAAATACTT+TGG | 0.401377 | 5_1:+17667176 | None:intergenic |
CAGACACTAGCTGGTGTCAT+TGG | 0.404857 | 5_1:-17666080 | Msa0721230:three_prime_UTR |
TGCTGCGACGGCACGGGGCG+TGG | 0.405775 | 5_1:-17666568 | Msa0721230:CDS |
CTTAATGTGGGTGGAGCTGC+TGG | 0.418056 | 5_1:-17666474 | Msa0721230:CDS |
TCTAATTTGATACATGTACT+AGG | 0.423269 | 5_1:-17665811 | Msa0721230:three_prime_UTR |
ATAGTGGTAAAGGCCGTGTT+TGG | 0.429939 | 5_1:-17666166 | Msa0721230:exon |
TACGAGTGCTGCGACGGCAC+GGG | 0.438079 | 5_1:-17666574 | Msa0721230:CDS |
ATGCGTTGAAATATTCTAAC+CGG | 0.439764 | 5_1:+17667638 | None:intergenic |
GACGGAGAATGAGGTTGAAC+CGG | 0.444512 | 5_1:-17666352 | Msa0721230:CDS |
TTTGGAATTTGGATTATGTC+GGG | 0.453154 | 5_1:-17666148 | Msa0721230:three_prime_UTR |
ACATGAGGTGCCTCAACCTC+TGG | 0.453623 | 5_1:+17666417 | None:intergenic |
CGGATGATCAAGAGCGTCGT+TGG | 0.460641 | 5_1:-17666200 | Msa0721230:CDS |
ATGTGAGACGACGAGTTTGA+TGG | 0.466931 | 5_1:-17666442 | Msa0721230:CDS |
ATTGTTTACCTTGAAAGAGA+TGG | 0.467486 | 5_1:+17667614 | None:intergenic |
GCCATAGCTGTTCCTGCTGC+CGG | 0.467534 | 5_1:+17666909 | None:intergenic |
GTTTGGAATTTGGATTATGT+CGG | 0.467678 | 5_1:-17666149 | Msa0721230:three_prime_UTR |
TTGGTTTCATGGAATGAAGA+TGG | 0.472004 | 5_1:-17667248 | Msa0721230:CDS |
TGAAATATTCTAACCGGAAA+CGG | 0.475649 | 5_1:+17667644 | None:intergenic |
TGTTCATCACCAGAAGTTGC+TGG | 0.476217 | 5_1:+17666822 | None:intergenic |
GGTGTAATTAGGAACAGATC+TGG | 0.477002 | 5_1:-17667402 | Msa0721230:five_prime_UTR |
AGAGATTCTAGAAGTTTCGA+AGG | 0.477691 | 5_1:+17667720 | None:intergenic |
GCACCATTGTTCACCGCAAT+CGG | 0.477786 | 5_1:+17666777 | None:intergenic |
CGCTAACCTAACGCCGTCGC+CGG | 0.479775 | 5_1:-17667688 | Msa0721230:five_prime_UTR |
AGATCTGGAAAAGAAGTTGA+TGG | 0.487529 | 5_1:-17667387 | Msa0721230:exon |
GATTCACCTGTTTGCTCCAC+CGG | 0.494684 | 5_1:+17667356 | None:intergenic |
ACATTACCGGTGGAGCAAAC+AGG | 0.498008 | 5_1:-17667362 | Msa0721230:CDS |
TGAACCGGAGAGAGAGGAAC+GGG | 0.498202 | 5_1:-17666337 | Msa0721230:CDS |
CATGGCTAACAGACACTAGC+TGG | 0.498441 | 5_1:-17666089 | Msa0721230:three_prime_UTR |
ATGTTACTTGGAAACAAAGT+TGG | 0.498921 | 5_1:+17665770 | None:intergenic |
GCTGGAGACACCATTCTAAC+CGG | 0.500615 | 5_1:+17666840 | None:intergenic |
ACTAGGATGCTTCCACCCTA+TGG | 0.501720 | 5_1:-17665794 | Msa0721230:three_prime_UTR |
GTTGGAAATTGACGAAATAG+TGG | 0.503816 | 5_1:-17666182 | Msa0721230:exon |
GTCGAATTCATCTCCGATTG+CGG | 0.505685 | 5_1:-17666790 | Msa0721230:CDS |
ATTGAAACCCCAAACAGCTT+AGG | 0.506033 | 5_1:+17666393 | None:intergenic |
CAATTGGGCTTAAACGATGT+AGG | 0.509913 | 5_1:-17666374 | Msa0721230:CDS |
TTAGCAAATTCCCACCGGTC+AGG | 0.510367 | 5_1:+17666993 | None:intergenic |
TCATTCTCTTCAACTAACTC+CGG | 0.512986 | 5_1:+17666720 | None:intergenic |
TTCGGAAAGTTGTACCTGAC+CGG | 0.514506 | 5_1:-17667007 | Msa0721230:CDS |
CTACGAGTGCTGCGACGGCA+CGG | 0.515613 | 5_1:-17666575 | Msa0721230:CDS |
TTCTAGAAGTTTCGAAGGAG+AGG | 0.516926 | 5_1:+17667725 | None:intergenic |
ATCTTCTACGAGTGCTGCGA+CGG | 0.517274 | 5_1:-17666580 | Msa0721230:CDS |
TGTTCCCGTTCCTCTCTCTC+CGG | 0.518493 | 5_1:+17666333 | None:intergenic |
TGGAAACAAAGTTGGTCCAT+AGG | 0.519124 | 5_1:+17665778 | None:intergenic |
GGAAACAAAGTTGGTCCATA+GGG | 0.527244 | 5_1:+17665779 | None:intergenic |
CTGTTAGCCATGTTCAAACA+TGG | 0.530720 | 5_1:+17666100 | None:intergenic |
TATGGCGGCACCGGTTAGAA+TGG | 0.532149 | 5_1:-17666850 | Msa0721230:CDS |
AATTGACGAAATAGTGGTAA+AGG | 0.534223 | 5_1:-17666176 | Msa0721230:exon |
AAAAGGAGCGTGTGTGTTGG+TGG | 0.534804 | 5_1:+17667757 | None:intergenic |
TCATGTTCCTAAGCTGTTTG+GGG | 0.536796 | 5_1:-17666400 | Msa0721230:CDS |
AACAGTAGCTATGGCGGCAC+CGG | 0.542259 | 5_1:-17666859 | Msa0721230:CDS |
TGAGGTTGAACCGGAGAGAG+AGG | 0.546548 | 5_1:-17666343 | Msa0721230:CDS |
CATGAGTTGCACCACTGCGC+CGG | 0.546633 | 5_1:-17666739 | Msa0721230:CDS |
CGGTGGGAATTTGCTAATGA+CGG | 0.547176 | 5_1:-17666987 | Msa0721230:CDS |
GGTGGAGCAAACAGGTGAAT+CGG | 0.547365 | 5_1:-17667354 | Msa0721230:CDS |
GCCGGCAGCAGGAACAGCTA+TGG | 0.547975 | 5_1:-17666910 | Msa0721230:CDS |
TAATACTGTAACAGTAGCTA+TGG | 0.548334 | 5_1:-17666868 | Msa0721230:CDS |
TCTTTCTCTAAGCAAAATTG+TGG | 0.554230 | 5_1:+17665899 | None:intergenic |
ACGATGTAGGACGGAGAATG+AGG | 0.556638 | 5_1:-17666361 | Msa0721230:CDS |
ACGAGTGCTGCGACGGCACG+GGG | 0.561173 | 5_1:-17666573 | Msa0721230:CDS |
TTTGATGGAACCAGAGGTTG+AGG | 0.561367 | 5_1:-17666427 | Msa0721230:CDS |
GAAGAAACTGCCACCGGCGA+CGG | 0.562969 | 5_1:+17667675 | None:intergenic |
CTAGCTGGTGTCATTGGACA+AGG | 0.568184 | 5_1:-17666074 | Msa0721230:three_prime_UTR |
AAATCTCTAGCAAATTCAGC+AGG | 0.569125 | 5_1:+17667203 | None:intergenic |
ACGCTTGCTTGAGCAAAGCA+TGG | 0.569500 | 5_1:+17665954 | None:intergenic |
TGGTGATGGTGATGGTGACT+CGG | 0.574712 | 5_1:-17666220 | Msa0721230:CDS |
TCTCCGATTGCGGTGAACAA+TGG | 0.579507 | 5_1:-17666780 | Msa0721230:CDS |
CGGGGCGTGGTTGTAACAGA+AGG | 0.579523 | 5_1:-17666555 | Msa0721230:CDS |
GAAGTTTCGAAGGAGAGGAT+AGG | 0.579811 | 5_1:+17667730 | None:intergenic |
AACAGGTGAATCGGCGACGG+CGG | 0.583900 | 5_1:-17667345 | Msa0721230:CDS |
AATGAGCTAAGTCAATTGAA+AGG | 0.584859 | 5_1:-17666666 | Msa0721230:CDS |
AAGGAATGTTTCATTAGCTG+AGG | 0.585509 | 5_1:-17666508 | Msa0721230:CDS |
CCTCGTGATGGTGATGGTGA+TGG | 0.588325 | 5_1:-17666228 | Msa0721230:CDS |
ATCAAACTCGTCGTCTCACA+TGG | 0.592517 | 5_1:+17666444 | None:intergenic |
AAAGGAGCGTGTGTGTTGGT+GGG | 0.603469 | 5_1:+17667758 | None:intergenic |
AACAAAGTTGGTCCATAGGG+TGG | 0.604166 | 5_1:+17665782 | None:intergenic |
GCAAACAGGTGAATCGGCGA+CGG | 0.608757 | 5_1:-17667348 | Msa0721230:CDS |
AACTTCTGGTGATGAACAGG+TGG | 0.612326 | 5_1:-17666817 | Msa0721230:CDS |
AGTTAGTTGAAGAGAATGAA+AGG | 0.612844 | 5_1:-17666716 | Msa0721230:CDS |
CCATGAAACCAAATCATCAA+CGG | 0.613347 | 5_1:+17667259 | None:intergenic |
TAACCTAACGCCGTCGCCGG+TGG | 0.614840 | 5_1:-17667685 | Msa0721230:five_prime_UTR |
GGAAAGTTGTACCTGACCGG+TGG | 0.614886 | 5_1:-17667004 | Msa0721230:CDS |
TCTGAACCTCGTGATGGTGA+TGG | 0.617342 | 5_1:-17666234 | Msa0721230:CDS |
ATTTGCTTCGAGATATTCAG+CGG | 0.621869 | 5_1:-17666944 | Msa0721230:CDS |
TTCAACTAACTCCGGCGCAG+TGG | 0.622278 | 5_1:+17666728 | None:intergenic |
GATGCAAACACAATCCTCGC+AGG | 0.623759 | 5_1:-17666283 | Msa0721230:CDS |
GCAGGAGACTGATCGAGGAT+CGG | 0.626303 | 5_1:-17666265 | Msa0721230:CDS |
TCCTCGCAGGAGACTGATCG+AGG | 0.628520 | 5_1:-17666270 | Msa0721230:CDS |
GAAAGTTGTACCTGACCGGT+GGG | 0.631205 | 5_1:-17667003 | Msa0721230:CDS |
TACTGTAACAGTAGCTATGG+CGG | 0.634074 | 5_1:-17666865 | Msa0721230:CDS |
AATGTGGGTGGAGCTGCTGG+CGG | 0.634893 | 5_1:-17666471 | Msa0721230:CDS |
GGAAAATGTAGTGCTTAATG+TGG | 0.635559 | 5_1:-17666487 | Msa0721230:CDS |
TTGAACCGGAGAGAGAGGAA+CGG | 0.637385 | 5_1:-17666338 | Msa0721230:CDS |
AATGTAGTGCTTAATGTGGG+TGG | 0.639772 | 5_1:-17666483 | Msa0721230:CDS |
ATGACACCCATGTTTGAACA+TGG | 0.639922 | 5_1:-17666107 | Msa0721230:three_prime_UTR |
GAAAATGTAGTGCTTAATGT+GGG | 0.644997 | 5_1:-17666486 | Msa0721230:CDS |
CGTCATTAGCAAATTCCCAC+CGG | 0.646656 | 5_1:+17666988 | None:intergenic |
GACGAGTTTGATGGAACCAG+AGG | 0.648812 | 5_1:-17666433 | Msa0721230:CDS |
CCAAACAGCTTAGGAACATG+AGG | 0.651312 | 5_1:+17666402 | None:intergenic |
CATAATCCAAATTCCAAACA+CGG | 0.652013 | 5_1:+17666153 | None:intergenic |
TCAGAAGAAGAAACTGCCAC+CGG | 0.654949 | 5_1:+17667669 | None:intergenic |
TGGGCTTAAACGATGTAGGA+CGG | 0.657843 | 5_1:-17666370 | Msa0721230:CDS |
TCCTCGATCAGTCTCCTGCG+AGG | 0.667916 | 5_1:+17666269 | None:intergenic |
AGGAACAGCTATGGCGACAG+CGG | 0.668564 | 5_1:-17666901 | Msa0721230:CDS |
GGGGCGTGGTTGTAACAGAA+GGG | 0.668865 | 5_1:-17666554 | Msa0721230:CDS |
AAGGAGCGTGTGTGTTGGTG+GGG | 0.675490 | 5_1:+17667759 | None:intergenic |
GTTGATGGCGACATTACCGG+TGG | 0.679162 | 5_1:-17667372 | Msa0721230:exon |
GCTAATGACGGATTTCGACG+AGG | 0.685443 | 5_1:-17666975 | Msa0721230:CDS |
TGTTAGCCATGTTCAAACAT+GGG | 0.695320 | 5_1:+17666101 | None:intergenic |
GTGAAATCTGAACCTCGTGA+TGG | 0.700758 | 5_1:-17666240 | Msa0721230:CDS |
CCATCACCATCACCATCACG+AGG | 0.701913 | 5_1:+17666228 | None:intergenic |
TAGCTGGTGTCATTGGACAA+GGG | 0.714141 | 5_1:-17666073 | Msa0721230:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATTATGATGTTAAATA+TGG | + | chr5_1:17666077-17666096 | None:intergenic | 10.0% |
!! | AATTATTATGATGTTAAATA+TGG | + | chr5_1:17666077-17666096 | None:intergenic | 10.0% |
!! | ATAGATTATTAGATTAGAAT+AGG | - | chr5_1:17666047-17666066 | Msa0721230:three_prime_UTR | 15.0% |
!!! | CATAATAATTTTGTTTGATT+AGG | - | chr5_1:17666087-17666106 | Msa0721230:three_prime_UTR | 15.0% |
!! | AAAAAAGAAAGTAAAACAAA+AGG | + | chr5_1:17666471-17666490 | None:intergenic | 15.0% |
!!! | TTTGTTTTACTTTCTTTTTT+AGG | - | chr5_1:17666471-17666490 | Msa0721230:CDS | 15.0% |
!!! | TAAATTTTGTGTTTATTTCT+AGG | - | chr5_1:17666509-17666528 | Msa0721230:CDS | 15.0% |
!!! | AAATTTTGTGTTTATTTCTA+GGG | - | chr5_1:17666510-17666529 | Msa0721230:CDS | 15.0% |
!! | ATAGATTATTAGATTAGAAT+AGG | - | chr5_1:17666047-17666066 | Msa0721230:three_prime_UTR | 15.0% |
!!! | CATAATAATTTTGTTTGATT+AGG | - | chr5_1:17666087-17666106 | Msa0721230:three_prime_UTR | 15.0% |
!! | AAAAAAGAAAGTAAAACAAA+AGG | + | chr5_1:17666471-17666490 | None:intergenic | 15.0% |
!!! | TTTGTTTTACTTTCTTTTTT+AGG | - | chr5_1:17666471-17666490 | Msa0721230:CDS | 15.0% |
!!! | TAAATTTTGTGTTTATTTCT+AGG | - | chr5_1:17666509-17666528 | Msa0721230:CDS | 15.0% |
!!! | AAATTTTGTGTTTATTTCTA+GGG | - | chr5_1:17666510-17666529 | Msa0721230:CDS | 15.0% |
!! | ACAAAGTATGATATTAACTA+AGG | + | chr5_1:17665988-17666007 | None:intergenic | 20.0% |
!! | ATGAACTAGATACAAAAATT+AGG | - | chr5_1:17666118-17666137 | Msa0721230:three_prime_UTR | 20.0% |
!! | TGAACTAGATACAAAAATTA+GGG | - | chr5_1:17666119-17666138 | Msa0721230:three_prime_UTR | 20.0% |
!!! | TTATTGTGTTTGAAATACTT+TGG | + | chr5_1:17666369-17666388 | None:intergenic | 20.0% |
!! | ACAAAGTATGATATTAACTA+AGG | + | chr5_1:17665988-17666007 | None:intergenic | 20.0% |
!! | ATGAACTAGATACAAAAATT+AGG | - | chr5_1:17666118-17666137 | Msa0721230:three_prime_UTR | 20.0% |
!! | TGAACTAGATACAAAAATTA+GGG | - | chr5_1:17666119-17666138 | Msa0721230:three_prime_UTR | 20.0% |
!!! | TTATTGTGTTTGAAATACTT+TGG | + | chr5_1:17666369-17666388 | None:intergenic | 20.0% |
! | TATACTAAGCATGCATAATA+CGG | + | chr5_1:17666024-17666043 | None:intergenic | 25.0% |
! | ACAAAAATTAGGGTGTAATT+AGG | - | chr5_1:17666129-17666148 | Msa0721230:three_prime_UTR | 25.0% |
! | TCTAATTTGATACATGTACT+AGG | - | chr5_1:17667731-17667750 | Msa0721230:five_prime_UTR | 25.0% |
! | TATACTAAGCATGCATAATA+CGG | + | chr5_1:17666024-17666043 | None:intergenic | 25.0% |
! | ACAAAAATTAGGGTGTAATT+AGG | - | chr5_1:17666129-17666148 | Msa0721230:three_prime_UTR | 25.0% |
! | TCTAATTTGATACATGTACT+AGG | - | chr5_1:17667731-17667750 | Msa0721230:five_prime_UTR | 25.0% |
TGAAATATTCTAACCGGAAA+CGG | + | chr5_1:17665901-17665920 | None:intergenic | 30.0% | |
ATGCGTTGAAATATTCTAAC+CGG | + | chr5_1:17665907-17665926 | None:intergenic | 30.0% | |
ATTGTTTACCTTGAAAGAGA+TGG | + | chr5_1:17665931-17665950 | None:intergenic | 30.0% | |
!! | GTGTTTATTTCTAGGGATTT+CGG | - | chr5_1:17666517-17666536 | Msa0721230:CDS | 30.0% |
TAATACTGTAACAGTAGCTA+TGG | - | chr5_1:17666674-17666693 | Msa0721230:CDS | 30.0% | |
AGTTAGTTGAAGAGAATGAA+AGG | - | chr5_1:17666826-17666845 | Msa0721230:CDS | 30.0% | |
AATGAGCTAAGTCAATTGAA+AGG | - | chr5_1:17666876-17666895 | Msa0721230:CDS | 30.0% | |
ATGATGAGTAATTATGCTTC+TGG | - | chr5_1:17666921-17666940 | Msa0721230:CDS | 30.0% | |
! | TGTAACAGAAGGGAAAATTT+TGG | - | chr5_1:17666998-17667017 | Msa0721230:CDS | 30.0% |
! | TTTTGGATCTTTTGCCTATA+AGG | - | chr5_1:17667015-17667034 | Msa0721230:intron | 30.0% |
GCTAATGAAACATTCCTTAT+AGG | + | chr5_1:17667032-17667051 | None:intergenic | 30.0% | |
GAAAATGTAGTGCTTAATGT+GGG | - | chr5_1:17667056-17667075 | Msa0721230:intron | 30.0% | |
AATTGACGAAATAGTGGTAA+AGG | - | chr5_1:17667366-17667385 | Msa0721230:CDS | 30.0% | |
CATAATCCAAATTCCAAACA+CGG | + | chr5_1:17667392-17667411 | None:intergenic | 30.0% | |
! | GTTTGGAATTTGGATTATGT+CGG | - | chr5_1:17667393-17667412 | Msa0721230:five_prime_UTR | 30.0% |
! | TTTGGAATTTGGATTATGTC+GGG | - | chr5_1:17667394-17667413 | Msa0721230:five_prime_UTR | 30.0% |
!! | GGTGTCATGTTTCAAATTTT+AGG | + | chr5_1:17667423-17667442 | None:intergenic | 30.0% |
TCTTTCTCTAAGCAAAATTG+TGG | + | chr5_1:17667646-17667665 | None:intergenic | 30.0% | |
TGAAATATTCTAACCGGAAA+CGG | + | chr5_1:17665901-17665920 | None:intergenic | 30.0% | |
ATGCGTTGAAATATTCTAAC+CGG | + | chr5_1:17665907-17665926 | None:intergenic | 30.0% | |
ATTGTTTACCTTGAAAGAGA+TGG | + | chr5_1:17665931-17665950 | None:intergenic | 30.0% | |
!! | GTGTTTATTTCTAGGGATTT+CGG | - | chr5_1:17666517-17666536 | Msa0721230:CDS | 30.0% |
TAATACTGTAACAGTAGCTA+TGG | - | chr5_1:17666674-17666693 | Msa0721230:CDS | 30.0% | |
AGTTAGTTGAAGAGAATGAA+AGG | - | chr5_1:17666826-17666845 | Msa0721230:CDS | 30.0% | |
AATGAGCTAAGTCAATTGAA+AGG | - | chr5_1:17666876-17666895 | Msa0721230:CDS | 30.0% | |
ATGATGAGTAATTATGCTTC+TGG | - | chr5_1:17666921-17666940 | Msa0721230:CDS | 30.0% | |
! | TGTAACAGAAGGGAAAATTT+TGG | - | chr5_1:17666998-17667017 | Msa0721230:CDS | 30.0% |
! | TTTTGGATCTTTTGCCTATA+AGG | - | chr5_1:17667015-17667034 | Msa0721230:intron | 30.0% |
GCTAATGAAACATTCCTTAT+AGG | + | chr5_1:17667032-17667051 | None:intergenic | 30.0% | |
GAAAATGTAGTGCTTAATGT+GGG | - | chr5_1:17667056-17667075 | Msa0721230:intron | 30.0% | |
AATTGACGAAATAGTGGTAA+AGG | - | chr5_1:17667366-17667385 | Msa0721230:CDS | 30.0% | |
CATAATCCAAATTCCAAACA+CGG | + | chr5_1:17667392-17667411 | None:intergenic | 30.0% | |
! | GTTTGGAATTTGGATTATGT+CGG | - | chr5_1:17667393-17667412 | Msa0721230:five_prime_UTR | 30.0% |
! | TTTGGAATTTGGATTATGTC+GGG | - | chr5_1:17667394-17667413 | Msa0721230:five_prime_UTR | 30.0% |
!! | GGTGTCATGTTTCAAATTTT+AGG | + | chr5_1:17667423-17667442 | None:intergenic | 30.0% |
TCTTTCTCTAAGCAAAATTG+TGG | + | chr5_1:17667646-17667665 | None:intergenic | 30.0% | |
AGGAGAGGATAGGAATAAAA+AGG | + | chr5_1:17665805-17665824 | None:intergenic | 35.0% | |
! | AGAGATTCTAGAAGTTTCGA+AGG | + | chr5_1:17665825-17665844 | None:intergenic | 35.0% |
AGATCTGGAAAAGAAGTTGA+TGG | - | chr5_1:17666155-17666174 | Msa0721230:three_prime_UTR | 35.0% | |
! | TGATACGTTTTCGTCAGAAA+CGG | + | chr5_1:17666246-17666265 | None:intergenic | 35.0% |
!! | TGATTCTTCCGTTGATGATT+TGG | - | chr5_1:17666275-17666294 | Msa0721230:CDS | 35.0% |
CCATGAAACCAAATCATCAA+CGG | + | chr5_1:17666286-17666305 | None:intergenic | 35.0% | |
TTGGTTTCATGGAATGAAGA+TGG | - | chr5_1:17666294-17666313 | Msa0721230:CDS | 35.0% | |
ATGGAACAAGCTTCATAGTT+TGG | - | chr5_1:17666313-17666332 | Msa0721230:CDS | 35.0% | |
AAATCTCTAGCAAATTCAGC+AGG | + | chr5_1:17666342-17666361 | None:intergenic | 35.0% | |
ATTTGCTTCGAGATATTCAG+CGG | - | chr5_1:17666598-17666617 | Msa0721230:CDS | 35.0% | |
TCATTCTCTTCAACTAACTC+CGG | + | chr5_1:17666825-17666844 | None:intergenic | 35.0% | |
AAGGAATGTTTCATTAGCTG+AGG | - | chr5_1:17667034-17667053 | Msa0721230:intron | 35.0% | |
GGAAAATGTAGTGCTTAATG+TGG | - | chr5_1:17667055-17667074 | Msa0721230:intron | 35.0% | |
GTTGGAAATTGACGAAATAG+TGG | - | chr5_1:17667360-17667379 | Msa0721230:CDS | 35.0% | |
TGTTAGCCATGTTCAAACAT+GGG | + | chr5_1:17667444-17667463 | None:intergenic | 35.0% | |
AGGAGAGGATAGGAATAAAA+AGG | + | chr5_1:17665805-17665824 | None:intergenic | 35.0% | |
! | AGAGATTCTAGAAGTTTCGA+AGG | + | chr5_1:17665825-17665844 | None:intergenic | 35.0% |
AGATCTGGAAAAGAAGTTGA+TGG | - | chr5_1:17666155-17666174 | Msa0721230:three_prime_UTR | 35.0% | |
! | TGATACGTTTTCGTCAGAAA+CGG | + | chr5_1:17666246-17666265 | None:intergenic | 35.0% |
!! | TGATTCTTCCGTTGATGATT+TGG | - | chr5_1:17666275-17666294 | Msa0721230:CDS | 35.0% |
CCATGAAACCAAATCATCAA+CGG | + | chr5_1:17666286-17666305 | None:intergenic | 35.0% | |
TTGGTTTCATGGAATGAAGA+TGG | - | chr5_1:17666294-17666313 | Msa0721230:CDS | 35.0% | |
ATGGAACAAGCTTCATAGTT+TGG | - | chr5_1:17666313-17666332 | Msa0721230:CDS | 35.0% | |
AAATCTCTAGCAAATTCAGC+AGG | + | chr5_1:17666342-17666361 | None:intergenic | 35.0% | |
ATTTGCTTCGAGATATTCAG+CGG | - | chr5_1:17666598-17666617 | Msa0721230:CDS | 35.0% | |
TCATTCTCTTCAACTAACTC+CGG | + | chr5_1:17666825-17666844 | None:intergenic | 35.0% | |
AAGGAATGTTTCATTAGCTG+AGG | - | chr5_1:17667034-17667053 | Msa0721230:intron | 35.0% | |
GGAAAATGTAGTGCTTAATG+TGG | - | chr5_1:17667055-17667074 | Msa0721230:intron | 35.0% | |
GTTGGAAATTGACGAAATAG+TGG | - | chr5_1:17667360-17667379 | Msa0721230:CDS | 35.0% | |
TGTTAGCCATGTTCAAACAT+GGG | + | chr5_1:17667444-17667463 | None:intergenic | 35.0% | |
! | ATAAAAAGGAGCGTGTGTGT+TGG | + | chr5_1:17665791-17665810 | None:intergenic | 40.0% |
! | TTCTAGAAGTTTCGAAGGAG+AGG | + | chr5_1:17665820-17665839 | None:intergenic | 40.0% |
AACGCATTCCATCTCTTTCA+AGG | - | chr5_1:17665920-17665939 | Msa0721230:three_prime_UTR | 40.0% | |
GGTGTAATTAGGAACAGATC+TGG | - | chr5_1:17666140-17666159 | Msa0721230:three_prime_UTR | 40.0% | |
!! | CCGTTGATGATTTGGTTTCA+TGG | - | chr5_1:17666283-17666302 | Msa0721230:CDS | 40.0% |
!! | ATTGAGTTGACGAACGAAAC+TGG | + | chr5_1:17666397-17666416 | None:intergenic | 40.0% |
TCAGCGGAGAAAAATATTGC+CGG | - | chr5_1:17666614-17666633 | Msa0721230:CDS | 40.0% | |
TACTGTAACAGTAGCTATGG+CGG | - | chr5_1:17666677-17666696 | Msa0721230:CDS | 40.0% | |
AATGTAGTGCTTAATGTGGG+TGG | - | chr5_1:17667059-17667078 | Msa0721230:intron | 40.0% | |
CTCATGTTCCTAAGCTGTTT+GGG | - | chr5_1:17667141-17667160 | Msa0721230:intron | 40.0% | |
TCATGTTCCTAAGCTGTTTG+GGG | - | chr5_1:17667142-17667161 | Msa0721230:CDS | 40.0% | |
ATTGAAACCCCAAACAGCTT+AGG | + | chr5_1:17667152-17667171 | None:intergenic | 40.0% | |
! | AAGCTGTTTGGGGTTTCAAT+TGG | - | chr5_1:17667152-17667171 | Msa0721230:CDS | 40.0% |
! | AGCTGTTTGGGGTTTCAATT+GGG | - | chr5_1:17667153-17667172 | Msa0721230:CDS | 40.0% |
CAATTGGGCTTAAACGATGT+AGG | - | chr5_1:17667168-17667187 | Msa0721230:CDS | 40.0% | |
! | TAAAGGCCGTGTTTGGAATT+TGG | - | chr5_1:17667383-17667402 | Msa0721230:exon | 40.0% |
ATGACACCCATGTTTGAACA+TGG | - | chr5_1:17667435-17667454 | Msa0721230:five_prime_UTR | 40.0% | |
CTGTTAGCCATGTTCAAACA+TGG | + | chr5_1:17667445-17667464 | None:intergenic | 40.0% | |
! | ATAAAAAGGAGCGTGTGTGT+TGG | + | chr5_1:17665791-17665810 | None:intergenic | 40.0% |
! | TTCTAGAAGTTTCGAAGGAG+AGG | + | chr5_1:17665820-17665839 | None:intergenic | 40.0% |
AACGCATTCCATCTCTTTCA+AGG | - | chr5_1:17665920-17665939 | Msa0721230:three_prime_UTR | 40.0% | |
GGTGTAATTAGGAACAGATC+TGG | - | chr5_1:17666140-17666159 | Msa0721230:three_prime_UTR | 40.0% | |
!! | CCGTTGATGATTTGGTTTCA+TGG | - | chr5_1:17666283-17666302 | Msa0721230:CDS | 40.0% |
!! | ATTGAGTTGACGAACGAAAC+TGG | + | chr5_1:17666397-17666416 | None:intergenic | 40.0% |
TCAGCGGAGAAAAATATTGC+CGG | - | chr5_1:17666614-17666633 | Msa0721230:CDS | 40.0% | |
TACTGTAACAGTAGCTATGG+CGG | - | chr5_1:17666677-17666696 | Msa0721230:CDS | 40.0% | |
AATGTAGTGCTTAATGTGGG+TGG | - | chr5_1:17667059-17667078 | Msa0721230:intron | 40.0% | |
CTCATGTTCCTAAGCTGTTT+GGG | - | chr5_1:17667141-17667160 | Msa0721230:intron | 40.0% | |
TCATGTTCCTAAGCTGTTTG+GGG | - | chr5_1:17667142-17667161 | Msa0721230:CDS | 40.0% | |
ATTGAAACCCCAAACAGCTT+AGG | + | chr5_1:17667152-17667171 | None:intergenic | 40.0% | |
! | AAGCTGTTTGGGGTTTCAAT+TGG | - | chr5_1:17667152-17667171 | Msa0721230:CDS | 40.0% |
! | AGCTGTTTGGGGTTTCAATT+GGG | - | chr5_1:17667153-17667172 | Msa0721230:CDS | 40.0% |
CAATTGGGCTTAAACGATGT+AGG | - | chr5_1:17667168-17667187 | Msa0721230:CDS | 40.0% | |
! | TAAAGGCCGTGTTTGGAATT+TGG | - | chr5_1:17667383-17667402 | Msa0721230:exon | 40.0% |
ATGACACCCATGTTTGAACA+TGG | - | chr5_1:17667435-17667454 | Msa0721230:five_prime_UTR | 40.0% | |
CTGTTAGCCATGTTCAAACA+TGG | + | chr5_1:17667445-17667464 | None:intergenic | 40.0% | |
GAAGTTTCGAAGGAGAGGAT+AGG | + | chr5_1:17665815-17665834 | None:intergenic | 45.0% | |
TCAGAAGAAGAAACTGCCAC+CGG | + | chr5_1:17665876-17665895 | None:intergenic | 45.0% | |
TCTTCTTCTGACTCCGTTTC+CGG | - | chr5_1:17665885-17665904 | Msa0721230:three_prime_UTR | 45.0% | |
!! | GAAGTTGATGGCGACATTAC+CGG | - | chr5_1:17666167-17666186 | Msa0721230:exon | 45.0% |
TTCGGAAAGTTGTACCTGAC+CGG | - | chr5_1:17666535-17666554 | Msa0721230:CDS | 45.0% | |
CGTCATTAGCAAATTCCCAC+CGG | + | chr5_1:17666557-17666576 | None:intergenic | 45.0% | |
!! | CGGTGGGAATTTGCTAATGA+CGG | - | chr5_1:17666555-17666574 | Msa0721230:CDS | 45.0% |
AGAAAAATATTGCCGGCAGC+AGG | - | chr5_1:17666621-17666640 | Msa0721230:CDS | 45.0% | |
TGTTCATCACCAGAAGTTGC+TGG | + | chr5_1:17666723-17666742 | None:intergenic | 45.0% | |
! | AGCAACTTCTGGTGATGAAC+AGG | - | chr5_1:17666722-17666741 | Msa0721230:CDS | 45.0% |
! | AACTTCTGGTGATGAACAGG+TGG | - | chr5_1:17666725-17666744 | Msa0721230:CDS | 45.0% |
GTCGAATTCATCTCCGATTG+CGG | - | chr5_1:17666752-17666771 | Msa0721230:CDS | 45.0% | |
ATCAAACTCGTCGTCTCACA+TGG | + | chr5_1:17667101-17667120 | None:intergenic | 45.0% | |
ATGTGAGACGACGAGTTTGA+TGG | - | chr5_1:17667100-17667119 | Msa0721230:intron | 45.0% | |
TTTGATGGAACCAGAGGTTG+AGG | - | chr5_1:17667115-17667134 | Msa0721230:intron | 45.0% | |
CCAAACAGCTTAGGAACATG+AGG | + | chr5_1:17667143-17667162 | None:intergenic | 45.0% | |
CCTCATGTTCCTAAGCTGTT+TGG | - | chr5_1:17667140-17667159 | Msa0721230:intron | 45.0% | |
TGGGCTTAAACGATGTAGGA+CGG | - | chr5_1:17667172-17667191 | Msa0721230:CDS | 45.0% | |
GTGAAATCTGAACCTCGTGA+TGG | - | chr5_1:17667302-17667321 | Msa0721230:CDS | 45.0% | |
ATAGTGGTAAAGGCCGTGTT+TGG | - | chr5_1:17667376-17667395 | Msa0721230:exon | 45.0% | |
!! | TAGCTGGTGTCATTGGACAA+GGG | - | chr5_1:17667469-17667488 | Msa0721230:intron | 45.0% |
! | AACAAAGTTGGTCCATAGGG+TGG | + | chr5_1:17667763-17667782 | None:intergenic | 45.0% |
GAAGTTTCGAAGGAGAGGAT+AGG | + | chr5_1:17665815-17665834 | None:intergenic | 45.0% | |
TCAGAAGAAGAAACTGCCAC+CGG | + | chr5_1:17665876-17665895 | None:intergenic | 45.0% | |
TCTTCTTCTGACTCCGTTTC+CGG | - | chr5_1:17665885-17665904 | Msa0721230:three_prime_UTR | 45.0% | |
!! | GAAGTTGATGGCGACATTAC+CGG | - | chr5_1:17666167-17666186 | Msa0721230:exon | 45.0% |
TTCGGAAAGTTGTACCTGAC+CGG | - | chr5_1:17666535-17666554 | Msa0721230:CDS | 45.0% | |
CGTCATTAGCAAATTCCCAC+CGG | + | chr5_1:17666557-17666576 | None:intergenic | 45.0% | |
!! | CGGTGGGAATTTGCTAATGA+CGG | - | chr5_1:17666555-17666574 | Msa0721230:CDS | 45.0% |
AGAAAAATATTGCCGGCAGC+AGG | - | chr5_1:17666621-17666640 | Msa0721230:CDS | 45.0% | |
TGTTCATCACCAGAAGTTGC+TGG | + | chr5_1:17666723-17666742 | None:intergenic | 45.0% | |
! | AGCAACTTCTGGTGATGAAC+AGG | - | chr5_1:17666722-17666741 | Msa0721230:CDS | 45.0% |
! | AACTTCTGGTGATGAACAGG+TGG | - | chr5_1:17666725-17666744 | Msa0721230:CDS | 45.0% |
GTCGAATTCATCTCCGATTG+CGG | - | chr5_1:17666752-17666771 | Msa0721230:CDS | 45.0% | |
ATCAAACTCGTCGTCTCACA+TGG | + | chr5_1:17667101-17667120 | None:intergenic | 45.0% | |
ATGTGAGACGACGAGTTTGA+TGG | - | chr5_1:17667100-17667119 | Msa0721230:intron | 45.0% | |
TTTGATGGAACCAGAGGTTG+AGG | - | chr5_1:17667115-17667134 | Msa0721230:intron | 45.0% | |
CCAAACAGCTTAGGAACATG+AGG | + | chr5_1:17667143-17667162 | None:intergenic | 45.0% | |
CCTCATGTTCCTAAGCTGTT+TGG | - | chr5_1:17667140-17667159 | Msa0721230:intron | 45.0% | |
TGGGCTTAAACGATGTAGGA+CGG | - | chr5_1:17667172-17667191 | Msa0721230:CDS | 45.0% | |
GTGAAATCTGAACCTCGTGA+TGG | - | chr5_1:17667302-17667321 | Msa0721230:CDS | 45.0% | |
ATAGTGGTAAAGGCCGTGTT+TGG | - | chr5_1:17667376-17667395 | Msa0721230:exon | 45.0% | |
!! | TAGCTGGTGTCATTGGACAA+GGG | - | chr5_1:17667469-17667488 | Msa0721230:intron | 45.0% |
! | AACAAAGTTGGTCCATAGGG+TGG | + | chr5_1:17667763-17667782 | None:intergenic | 45.0% |
!! | AAATTAATTAATTGATTATA+TGG | + | chr5_1:17665964-17665983 | None:intergenic | 5.0% |
!! | AAATTAATTAATTGATTATA+TGG | + | chr5_1:17665964-17665983 | None:intergenic | 5.0% |
! | AAAGGAGCGTGTGTGTTGGT+GGG | + | chr5_1:17665787-17665806 | None:intergenic | 50.0% |
! | AAAAGGAGCGTGTGTGTTGG+TGG | + | chr5_1:17665788-17665807 | None:intergenic | 50.0% |
ACATTACCGGTGGAGCAAAC+AGG | - | chr5_1:17666180-17666199 | Msa0721230:exon | 50.0% | |
GATTCACCTGTTTGCTCCAC+CGG | + | chr5_1:17666189-17666208 | None:intergenic | 50.0% | |
GGTGGAGCAAACAGGTGAAT+CGG | - | chr5_1:17666188-17666207 | Msa0721230:CDS | 50.0% | |
! | GTTTTCGTCAGAAACGGCGT+CGG | + | chr5_1:17666240-17666259 | None:intergenic | 50.0% |
GAAAGTTGTACCTGACCGGT+GGG | - | chr5_1:17666539-17666558 | Msa0721230:CDS | 50.0% | |
TTAGCAAATTCCCACCGGTC+AGG | + | chr5_1:17666552-17666571 | None:intergenic | 50.0% | |
!! | GCTAATGACGGATTTCGACG+AGG | - | chr5_1:17666567-17666586 | Msa0721230:CDS | 50.0% |
GCTGGAGACACCATTCTAAC+CGG | + | chr5_1:17666705-17666724 | None:intergenic | 50.0% | |
ATGGTGTCTCCAGCAACTTC+TGG | - | chr5_1:17666711-17666730 | Msa0721230:CDS | 50.0% | |
TCTCCGATTGCGGTGAACAA+TGG | - | chr5_1:17666762-17666781 | Msa0721230:CDS | 50.0% | |
GCACCATTGTTCACCGCAAT+CGG | + | chr5_1:17666768-17666787 | None:intergenic | 50.0% | |
! | ATCTTCTACGAGTGCTGCGA+CGG | - | chr5_1:17666962-17666981 | Msa0721230:CDS | 50.0% |
GACGAGTTTGATGGAACCAG+AGG | - | chr5_1:17667109-17667128 | Msa0721230:intron | 50.0% | |
ACGATGTAGGACGGAGAATG+AGG | - | chr5_1:17667181-17667200 | Msa0721230:CDS | 50.0% | |
GACGGAGAATGAGGTTGAAC+CGG | - | chr5_1:17667190-17667209 | Msa0721230:CDS | 50.0% | |
TTGAACCGGAGAGAGAGGAA+CGG | - | chr5_1:17667204-17667223 | Msa0721230:CDS | 50.0% | |
GATGCAAACACAATCCTCGC+AGG | - | chr5_1:17667259-17667278 | Msa0721230:CDS | 50.0% | |
! | TCTGAACCTCGTGATGGTGA+TGG | - | chr5_1:17667308-17667327 | Msa0721230:CDS | 50.0% |
!! | TGGTGATGGTGATGGTGACT+CGG | - | chr5_1:17667322-17667341 | Msa0721230:CDS | 50.0% |
CATGGCTAACAGACACTAGC+TGG | - | chr5_1:17667453-17667472 | Msa0721230:intron | 50.0% | |
!! | CAGACACTAGCTGGTGTCAT+TGG | - | chr5_1:17667462-17667481 | Msa0721230:intron | 50.0% |
!! | CTAGCTGGTGTCATTGGACA+AGG | - | chr5_1:17667468-17667487 | Msa0721230:intron | 50.0% |
ACGCTTGCTTGAGCAAAGCA+TGG | + | chr5_1:17667591-17667610 | None:intergenic | 50.0% | |
ACTAGGATGCTTCCACCCTA+TGG | - | chr5_1:17667748-17667767 | Msa0721230:five_prime_UTR | 50.0% | |
! | AAAGGAGCGTGTGTGTTGGT+GGG | + | chr5_1:17665787-17665806 | None:intergenic | 50.0% |
! | AAAAGGAGCGTGTGTGTTGG+TGG | + | chr5_1:17665788-17665807 | None:intergenic | 50.0% |
ACATTACCGGTGGAGCAAAC+AGG | - | chr5_1:17666180-17666199 | Msa0721230:exon | 50.0% | |
GATTCACCTGTTTGCTCCAC+CGG | + | chr5_1:17666189-17666208 | None:intergenic | 50.0% | |
GGTGGAGCAAACAGGTGAAT+CGG | - | chr5_1:17666188-17666207 | Msa0721230:CDS | 50.0% | |
! | GTTTTCGTCAGAAACGGCGT+CGG | + | chr5_1:17666240-17666259 | None:intergenic | 50.0% |
GAAAGTTGTACCTGACCGGT+GGG | - | chr5_1:17666539-17666558 | Msa0721230:CDS | 50.0% | |
TTAGCAAATTCCCACCGGTC+AGG | + | chr5_1:17666552-17666571 | None:intergenic | 50.0% | |
!! | GCTAATGACGGATTTCGACG+AGG | - | chr5_1:17666567-17666586 | Msa0721230:CDS | 50.0% |
GCTGGAGACACCATTCTAAC+CGG | + | chr5_1:17666705-17666724 | None:intergenic | 50.0% | |
ATGGTGTCTCCAGCAACTTC+TGG | - | chr5_1:17666711-17666730 | Msa0721230:CDS | 50.0% | |
TCTCCGATTGCGGTGAACAA+TGG | - | chr5_1:17666762-17666781 | Msa0721230:CDS | 50.0% | |
GCACCATTGTTCACCGCAAT+CGG | + | chr5_1:17666768-17666787 | None:intergenic | 50.0% | |
! | ATCTTCTACGAGTGCTGCGA+CGG | - | chr5_1:17666962-17666981 | Msa0721230:CDS | 50.0% |
GACGAGTTTGATGGAACCAG+AGG | - | chr5_1:17667109-17667128 | Msa0721230:intron | 50.0% | |
ACGATGTAGGACGGAGAATG+AGG | - | chr5_1:17667181-17667200 | Msa0721230:CDS | 50.0% | |
GACGGAGAATGAGGTTGAAC+CGG | - | chr5_1:17667190-17667209 | Msa0721230:CDS | 50.0% | |
TTGAACCGGAGAGAGAGGAA+CGG | - | chr5_1:17667204-17667223 | Msa0721230:CDS | 50.0% | |
GATGCAAACACAATCCTCGC+AGG | - | chr5_1:17667259-17667278 | Msa0721230:CDS | 50.0% | |
! | TCTGAACCTCGTGATGGTGA+TGG | - | chr5_1:17667308-17667327 | Msa0721230:CDS | 50.0% |
!! | TGGTGATGGTGATGGTGACT+CGG | - | chr5_1:17667322-17667341 | Msa0721230:CDS | 50.0% |
CATGGCTAACAGACACTAGC+TGG | - | chr5_1:17667453-17667472 | Msa0721230:intron | 50.0% | |
!! | CAGACACTAGCTGGTGTCAT+TGG | - | chr5_1:17667462-17667481 | Msa0721230:intron | 50.0% |
!! | CTAGCTGGTGTCATTGGACA+AGG | - | chr5_1:17667468-17667487 | Msa0721230:intron | 50.0% |
ACGCTTGCTTGAGCAAAGCA+TGG | + | chr5_1:17667591-17667610 | None:intergenic | 50.0% | |
ACTAGGATGCTTCCACCCTA+TGG | - | chr5_1:17667748-17667767 | Msa0721230:five_prime_UTR | 50.0% | |
! | AAGGAGCGTGTGTGTTGGTG+GGG | + | chr5_1:17665786-17665805 | None:intergenic | 55.0% |
!! | GTTGATGGCGACATTACCGG+TGG | - | chr5_1:17666170-17666189 | Msa0721230:exon | 55.0% |
GCAAACAGGTGAATCGGCGA+CGG | - | chr5_1:17666194-17666213 | Msa0721230:CDS | 55.0% | |
GGAAAGTTGTACCTGACCGG+TGG | - | chr5_1:17666538-17666557 | Msa0721230:CDS | 55.0% | |
AGGAACAGCTATGGCGACAG+CGG | - | chr5_1:17666641-17666660 | Msa0721230:CDS | 55.0% | |
AACAGTAGCTATGGCGGCAC+CGG | - | chr5_1:17666683-17666702 | Msa0721230:CDS | 55.0% | |
!! | TATGGCGGCACCGGTTAGAA+TGG | - | chr5_1:17666692-17666711 | Msa0721230:CDS | 55.0% |
TTCAACTAACTCCGGCGCAG+TGG | + | chr5_1:17666817-17666836 | None:intergenic | 55.0% | |
GGGGCGTGGTTGTAACAGAA+GGG | - | chr5_1:17666988-17667007 | Msa0721230:CDS | 55.0% | |
CTTAATGTGGGTGGAGCTGC+TGG | - | chr5_1:17667068-17667087 | Msa0721230:intron | 55.0% | |
! | ACATGAGGTGCCTCAACCTC+TGG | + | chr5_1:17667128-17667147 | None:intergenic | 55.0% |
TGAGGTTGAACCGGAGAGAG+AGG | - | chr5_1:17667199-17667218 | Msa0721230:CDS | 55.0% | |
TGAACCGGAGAGAGAGGAAC+GGG | - | chr5_1:17667205-17667224 | Msa0721230:CDS | 55.0% | |
TGTTCCCGTTCCTCTCTCTC+CGG | + | chr5_1:17667212-17667231 | None:intergenic | 55.0% | |
GCAGGAGACTGATCGAGGAT+CGG | - | chr5_1:17667277-17667296 | Msa0721230:CDS | 55.0% | |
CCATCACCATCACCATCACG+AGG | + | chr5_1:17667317-17667336 | None:intergenic | 55.0% | |
!! | CCTCGTGATGGTGATGGTGA+TGG | - | chr5_1:17667314-17667333 | Msa0721230:CDS | 55.0% |
!! | CGGATGATCAAGAGCGTCGT+TGG | - | chr5_1:17667342-17667361 | Msa0721230:CDS | 55.0% |
! | AAGGAGCGTGTGTGTTGGTG+GGG | + | chr5_1:17665786-17665805 | None:intergenic | 55.0% |
!! | GTTGATGGCGACATTACCGG+TGG | - | chr5_1:17666170-17666189 | Msa0721230:exon | 55.0% |
GCAAACAGGTGAATCGGCGA+CGG | - | chr5_1:17666194-17666213 | Msa0721230:CDS | 55.0% | |
GGAAAGTTGTACCTGACCGG+TGG | - | chr5_1:17666538-17666557 | Msa0721230:CDS | 55.0% | |
AGGAACAGCTATGGCGACAG+CGG | - | chr5_1:17666641-17666660 | Msa0721230:CDS | 55.0% | |
AACAGTAGCTATGGCGGCAC+CGG | - | chr5_1:17666683-17666702 | Msa0721230:CDS | 55.0% | |
!! | TATGGCGGCACCGGTTAGAA+TGG | - | chr5_1:17666692-17666711 | Msa0721230:CDS | 55.0% |
TTCAACTAACTCCGGCGCAG+TGG | + | chr5_1:17666817-17666836 | None:intergenic | 55.0% | |
GGGGCGTGGTTGTAACAGAA+GGG | - | chr5_1:17666988-17667007 | Msa0721230:CDS | 55.0% | |
CTTAATGTGGGTGGAGCTGC+TGG | - | chr5_1:17667068-17667087 | Msa0721230:intron | 55.0% | |
! | ACATGAGGTGCCTCAACCTC+TGG | + | chr5_1:17667128-17667147 | None:intergenic | 55.0% |
TGAGGTTGAACCGGAGAGAG+AGG | - | chr5_1:17667199-17667218 | Msa0721230:CDS | 55.0% | |
TGAACCGGAGAGAGAGGAAC+GGG | - | chr5_1:17667205-17667224 | Msa0721230:CDS | 55.0% | |
TGTTCCCGTTCCTCTCTCTC+CGG | + | chr5_1:17667212-17667231 | None:intergenic | 55.0% | |
GCAGGAGACTGATCGAGGAT+CGG | - | chr5_1:17667277-17667296 | Msa0721230:CDS | 55.0% | |
CCATCACCATCACCATCACG+AGG | + | chr5_1:17667317-17667336 | None:intergenic | 55.0% | |
!! | CCTCGTGATGGTGATGGTGA+TGG | - | chr5_1:17667314-17667333 | Msa0721230:CDS | 55.0% |
!! | CGGATGATCAAGAGCGTCGT+TGG | - | chr5_1:17667342-17667361 | Msa0721230:CDS | 55.0% |
GAAGAAACTGCCACCGGCGA+CGG | + | chr5_1:17665870-17665889 | None:intergenic | 60.0% | |
AACAGGTGAATCGGCGACGG+CGG | - | chr5_1:17666197-17666216 | Msa0721230:CDS | 60.0% | |
GCCATAGCTGTTCCTGCTGC+CGG | + | chr5_1:17666636-17666655 | None:intergenic | 60.0% | |
CATGAGTTGCACCACTGCGC+CGG | - | chr5_1:17666803-17666822 | Msa0721230:CDS | 60.0% | |
CGGGGCGTGGTTGTAACAGA+AGG | - | chr5_1:17666987-17667006 | Msa0721230:CDS | 60.0% | |
AATGTGGGTGGAGCTGCTGG+CGG | - | chr5_1:17667071-17667090 | Msa0721230:intron | 60.0% | |
TCCTCGCAGGAGACTGATCG+AGG | - | chr5_1:17667272-17667291 | Msa0721230:CDS | 60.0% | |
TCCTCGATCAGTCTCCTGCG+AGG | + | chr5_1:17667276-17667295 | None:intergenic | 60.0% | |
GAAGAAACTGCCACCGGCGA+CGG | + | chr5_1:17665870-17665889 | None:intergenic | 60.0% | |
AACAGGTGAATCGGCGACGG+CGG | - | chr5_1:17666197-17666216 | Msa0721230:CDS | 60.0% | |
GCCATAGCTGTTCCTGCTGC+CGG | + | chr5_1:17666636-17666655 | None:intergenic | 60.0% | |
CATGAGTTGCACCACTGCGC+CGG | - | chr5_1:17666803-17666822 | Msa0721230:CDS | 60.0% | |
CGGGGCGTGGTTGTAACAGA+AGG | - | chr5_1:17666987-17667006 | Msa0721230:CDS | 60.0% | |
AATGTGGGTGGAGCTGCTGG+CGG | - | chr5_1:17667071-17667090 | Msa0721230:intron | 60.0% | |
TCCTCGCAGGAGACTGATCG+AGG | - | chr5_1:17667272-17667291 | Msa0721230:CDS | 60.0% | |
TCCTCGATCAGTCTCCTGCG+AGG | + | chr5_1:17667276-17667295 | None:intergenic | 60.0% | |
CGCTAACCTAACGCCGTCGC+CGG | - | chr5_1:17665854-17665873 | Msa0721230:three_prime_UTR | 65.0% | |
TAACCTAACGCCGTCGCCGG+TGG | - | chr5_1:17665857-17665876 | Msa0721230:three_prime_UTR | 65.0% | |
GCCGGCAGCAGGAACAGCTA+TGG | - | chr5_1:17666632-17666651 | Msa0721230:CDS | 65.0% | |
! | CTACGAGTGCTGCGACGGCA+CGG | - | chr5_1:17666967-17666986 | Msa0721230:CDS | 65.0% |
! | TACGAGTGCTGCGACGGCAC+GGG | - | chr5_1:17666968-17666987 | Msa0721230:CDS | 65.0% |
CGCTAACCTAACGCCGTCGC+CGG | - | chr5_1:17665854-17665873 | Msa0721230:three_prime_UTR | 65.0% | |
TAACCTAACGCCGTCGCCGG+TGG | - | chr5_1:17665857-17665876 | Msa0721230:three_prime_UTR | 65.0% | |
GCCGGCAGCAGGAACAGCTA+TGG | - | chr5_1:17666632-17666651 | Msa0721230:CDS | 65.0% | |
! | CTACGAGTGCTGCGACGGCA+CGG | - | chr5_1:17666967-17666986 | Msa0721230:CDS | 65.0% |
! | TACGAGTGCTGCGACGGCAC+GGG | - | chr5_1:17666968-17666987 | Msa0721230:CDS | 65.0% |
! | ACGAGTGCTGCGACGGCACG+GGG | - | chr5_1:17666969-17666988 | Msa0721230:CDS | 70.0% |
! | ACGAGTGCTGCGACGGCACG+GGG | - | chr5_1:17666969-17666988 | Msa0721230:CDS | 70.0% |
CTGCCACCGGCGACGGCGTT+AGG | + | chr5_1:17665863-17665882 | None:intergenic | 75.0% | |
CTGCCACCGGCGACGGCGTT+AGG | + | chr5_1:17665863-17665882 | None:intergenic | 75.0% | |
! | TGCTGCGACGGCACGGGGCG+TGG | - | chr5_1:17666974-17666993 | Msa0721230:CDS | 80.0% |
! | TGCTGCGACGGCACGGGGCG+TGG | - | chr5_1:17666974-17666993 | Msa0721230:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 17665781 | 17667783 | 17665781 | ID=Msa0721230;Name=Msa0721230 |
chr5_1 | mRNA | 17665781 | 17667783 | 17665781 | ID=Msa0721230-mRNA-1;Parent=Msa0721230;Name=Msa0721230-mRNA-1;_AED=0.07;_eAED=0.07;_QI=226|1|1|1|0.5|0.33|3|404|365 |
chr5_1 | exon | 17665781 | 17667033 | 17665781 | ID=Msa0721230-mRNA-1:exon:6744;Parent=Msa0721230-mRNA-1 |
chr5_1 | exon | 17667142 | 17667455 | 17667142 | ID=Msa0721230-mRNA-1:exon:6743;Parent=Msa0721230-mRNA-1 |
chr5_1 | exon | 17667623 | 17667783 | 17667623 | ID=Msa0721230-mRNA-1:exon:6742;Parent=Msa0721230-mRNA-1 |
chr5_1 | five_prime_UTR | 17667623 | 17667783 | 17667623 | ID=Msa0721230-mRNA-1:five_prime_utr;Parent=Msa0721230-mRNA-1 |
chr5_1 | five_prime_UTR | 17667391 | 17667455 | 17667391 | ID=Msa0721230-mRNA-1:five_prime_utr;Parent=Msa0721230-mRNA-1 |
chr5_1 | CDS | 17667142 | 17667390 | 17667142 | ID=Msa0721230-mRNA-1:cds;Parent=Msa0721230-mRNA-1 |
chr5_1 | CDS | 17666185 | 17667033 | 17666185 | ID=Msa0721230-mRNA-1:cds;Parent=Msa0721230-mRNA-1 |
chr5_1 | three_prime_UTR | 17665781 | 17666184 | 17665781 | ID=Msa0721230-mRNA-1:three_prime_utr;Parent=Msa0721230-mRNA-1 |
Gene Sequence |
Protein sequence |