Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185400 | GAU46370.1 | 81.818 | 209 | 35 | 2 | 1 | 208 | 1 | 207 | 9.44e-117 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185400 | A0A2Z6P9U3 | 81.818 | 209 | 35 | 2 | 1 | 208 | 1 | 207 | 4.51e-117 | 340 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008090 | Msa0185400 | 0.815423 | 9.316550e-52 | -8.615850e-47 |
| Msa0018620 | Msa0185400 | 0.811640 | 6.328251e-51 | -8.615850e-47 |
| Msa0029630 | Msa0185400 | 0.816391 | 5.666294e-52 | -8.615850e-47 |
| Msa0031820 | Msa0185400 | 0.813872 | 2.054393e-51 | -8.615850e-47 |
| Msa0057610 | Msa0185400 | 0.808418 | 3.128060e-50 | -8.615850e-47 |
| Msa0069330 | Msa0185400 | 0.821294 | 4.359118e-53 | -8.615850e-47 |
| Msa0070430 | Msa0185400 | 0.824980 | 6.015713e-54 | -8.615850e-47 |
| Msa0073670 | Msa0185400 | 0.826534 | 2.573905e-54 | -8.615850e-47 |
| Msa0076000 | Msa0185400 | 0.810042 | 1.403074e-50 | -8.615850e-47 |
| Msa0076040 | Msa0185400 | 0.827769 | 1.303208e-54 | -8.615850e-47 |
| Msa0077200 | Msa0185400 | 0.813559 | 2.407650e-51 | -8.615850e-47 |
| Msa0079920 | Msa0185400 | 0.800092 | 1.695136e-48 | -8.615850e-47 |
| Msa0082280 | Msa0185400 | 0.812827 | 3.484980e-51 | -8.615850e-47 |
| Msa0104550 | Msa0185400 | 0.814087 | 1.842164e-51 | -8.615850e-47 |
| Msa0108550 | Msa0185400 | 0.827320 | 1.669414e-54 | -8.615850e-47 |
| Msa0115370 | Msa0185400 | 0.806586 | 7.655772e-50 | -8.615850e-47 |
| Msa0124990 | Msa0185400 | 0.801993 | 6.928350e-49 | -8.615850e-47 |
| Msa0125450 | Msa0185400 | 0.820258 | 7.543171e-53 | -8.615850e-47 |
| Msa0125540 | Msa0185400 | 0.818083 | 2.358743e-52 | -8.615850e-47 |
| Msa0126770 | Msa0185400 | 0.818432 | 1.965939e-52 | -8.615850e-47 |
| Msa0136120 | Msa0185400 | 0.802466 | 5.535654e-49 | -8.615850e-47 |
| Msa0138360 | Msa0185400 | 0.802792 | 4.741119e-49 | -8.615850e-47 |
| Msa0140960 | Msa0185400 | 0.819701 | 1.011704e-52 | -8.615850e-47 |
| Msa0144360 | Msa0185400 | 0.815408 | 9.388953e-52 | -8.615850e-47 |
| Msa0146280 | Msa0185400 | 0.813878 | 2.047961e-51 | -8.615850e-47 |
| Msa0147980 | Msa0185400 | 0.820590 | 6.330245e-53 | -8.615850e-47 |
| Msa0149390 | Msa0185400 | 0.812529 | 4.049250e-51 | -8.615850e-47 |
| Msa0167480 | Msa0185400 | 0.810124 | 1.346984e-50 | -8.615850e-47 |
| Msa0171290 | Msa0185400 | 0.811990 | 5.309170e-51 | -8.615850e-47 |
| Msa0171850 | Msa0185400 | 0.821345 | 4.242466e-53 | -8.615850e-47 |
| Msa0174770 | Msa0185400 | 0.822338 | 2.499024e-53 | -8.615850e-47 |
| Msa0174860 | Msa0185400 | 0.803745 | 3.010902e-49 | -8.615850e-47 |
| Msa0181610 | Msa0185400 | 0.841135 | 5.710561e-58 | -8.615850e-47 |
| Msa0185400 | Msa0186890 | 0.809918 | 1.492375e-50 | -8.615850e-47 |
| Msa0185400 | Msa0199880 | 0.812163 | 4.867446e-51 | -8.615850e-47 |
| Msa0185400 | Msa0206840 | 0.800573 | 1.352954e-48 | -8.615850e-47 |
| Msa0185400 | Msa0226460 | 0.819566 | 1.086099e-52 | -8.615850e-47 |
| Msa0185400 | Msa0241830 | 0.802884 | 4.538295e-49 | -8.615850e-47 |
| Msa0185400 | Msa0291520 | 0.808830 | 2.553715e-50 | -8.615850e-47 |
| Msa0185400 | Msa0295590 | 0.815551 | 8.726268e-52 | -8.615850e-47 |
| Msa0185400 | Msa0296250 | 0.820476 | 6.723362e-53 | -8.615850e-47 |
| Msa0185400 | Msa0305310 | 0.803674 | 3.113879e-49 | -8.615850e-47 |
| Msa0185400 | Msa0307850 | 0.815083 | 1.108732e-51 | -8.615850e-47 |
| Msa0185400 | Msa0318700 | 0.808174 | 3.525568e-50 | -8.615850e-47 |
| Msa0185400 | Msa0337510 | 0.832780 | 7.774102e-56 | -8.615850e-47 |
| Msa0185400 | Msa0355270 | 0.818322 | 2.082251e-52 | -8.615850e-47 |
| Msa0185400 | Msa0376280 | 0.826069 | 3.320618e-54 | -8.615850e-47 |
| Msa0185400 | Msa0378980 | 0.822506 | 2.283917e-53 | -8.615850e-47 |
| Msa0185400 | Msa0394400 | 0.824655 | 7.176898e-54 | -8.615850e-47 |
| Msa0185400 | Msa0402330 | 0.810629 | 1.048004e-50 | -8.615850e-47 |
| Msa0185400 | Msa0410500 | 0.820223 | 7.682287e-53 | -8.615850e-47 |
| Msa0185400 | Msa0413450 | 0.837679 | 4.508575e-57 | -8.615850e-47 |
| Msa0185400 | Msa0414020 | 0.818069 | 2.375851e-52 | -8.615850e-47 |
| Msa0185400 | Msa0423900 | 0.809284 | 2.041220e-50 | -8.615850e-47 |
| Msa0185400 | Msa0431770 | 0.820482 | 6.700406e-53 | -8.615850e-47 |
| Msa0185400 | Msa0443390 | 0.807821 | 4.191893e-50 | -8.615850e-47 |
| Msa0185400 | Msa0471590 | 0.806987 | 6.298345e-50 | -8.615850e-47 |
| Msa0185400 | Msa0474950 | 0.832744 | 7.936245e-56 | -8.615850e-47 |
| Msa0185400 | Msa0484290 | 0.830078 | 3.595888e-55 | -8.615850e-47 |
| Msa0185400 | Msa0505150 | 0.849131 | 3.936111e-60 | -8.615850e-47 |
| Msa0185400 | Msa0515640 | 0.820503 | 6.627839e-53 | -8.615850e-47 |
| Msa0185400 | Msa0516120 | 0.808085 | 3.682013e-50 | -8.615850e-47 |
| Msa0185400 | Msa0524500 | 0.840338 | 9.237421e-58 | -8.615850e-47 |
| Msa0185400 | Msa0541860 | 0.808073 | 3.704960e-50 | -8.615850e-47 |
| Msa0185400 | Msa0547990 | 0.813279 | 2.773605e-51 | -8.615850e-47 |
| Msa0185400 | Msa0552810 | 0.824012 | 1.016350e-53 | -8.615850e-47 |
| Msa0185400 | Msa0581070 | 0.845185 | 4.753208e-59 | -8.615850e-47 |
| Msa0185400 | Msa0593700 | 0.813660 | 2.287827e-51 | -8.615850e-47 |
| Msa0185400 | Msa0603570 | 0.802486 | 5.482969e-49 | -8.615850e-47 |
| Msa0185400 | Msa0620230 | 0.823131 | 1.633400e-53 | -8.615850e-47 |
| Msa0185400 | Msa0620990 | 0.804874 | 1.751602e-49 | -8.615850e-47 |
| Msa0185400 | Msa0623700 | 0.802003 | 6.893337e-49 | -8.615850e-47 |
| Msa0185400 | Msa0631250 | 0.804083 | 2.561388e-49 | -8.615850e-47 |
| Msa0185400 | Msa0633570 | 0.805174 | 1.516175e-49 | -8.615850e-47 |
| Msa0185400 | Msa0647430 | 0.816111 | 6.543561e-52 | -8.615850e-47 |
| Msa0185400 | Msa0659030 | 0.817074 | 3.981820e-52 | -8.615850e-47 |
| Msa0185400 | Msa0666230 | 0.810217 | 1.286495e-50 | -8.615850e-47 |
| Msa0185400 | Msa0683780 | 0.814133 | 1.799627e-51 | -8.615850e-47 |
| Msa0185400 | Msa0687630 | 0.833441 | 5.324714e-56 | -8.615850e-47 |
| Msa0185400 | Msa0689500 | 0.810088 | 1.371616e-50 | -8.615850e-47 |
| Msa0185400 | Msa0699360 | 0.835092 | 2.052038e-56 | -8.615850e-47 |
| Msa0185400 | Msa0702340 | 0.820391 | 7.032189e-53 | -8.615850e-47 |
| Msa0185400 | Msa0702590 | 0.821289 | 4.369205e-53 | -8.615850e-47 |
| Msa0185400 | Msa0702660 | 0.821326 | 4.285259e-53 | -8.615850e-47 |
| Msa0185400 | Msa0703230 | 0.811189 | 7.927490e-51 | -8.615850e-47 |
| Msa0185400 | Msa0705000 | 0.825769 | 3.913438e-54 | -8.615850e-47 |
| Msa0185400 | Msa0705040 | 0.823860 | 1.103306e-53 | -8.615850e-47 |
| Msa0185400 | Msa0709780 | 0.807130 | 5.874523e-50 | -8.615850e-47 |
| Msa0185400 | Msa0713820 | 0.801527 | 8.635310e-49 | -8.615850e-47 |
| Msa0185400 | Msa0721230 | 0.800952 | 1.132235e-48 | -8.615850e-47 |
| Msa0185400 | Msa0734960 | 0.828186 | 1.034074e-54 | -8.615850e-47 |
| Msa0185400 | Msa0738040 | 0.801058 | 1.077023e-48 | -8.615850e-47 |
| Msa0185400 | Msa0743800 | 0.808109 | 3.639118e-50 | -8.615850e-47 |
| Msa0185400 | Msa0749760 | 0.806802 | 6.890318e-50 | -8.615850e-47 |
| Msa0185400 | Msa0750920 | 0.823745 | 1.174085e-53 | -8.615850e-47 |
| Msa0185400 | Msa0752510 | 0.818310 | 2.095282e-52 | -8.615850e-47 |
| Msa0185400 | Msa0785130 | 0.806676 | 7.327873e-50 | -8.615850e-47 |
| Msa0185400 | Msa0788770 | 0.835257 | 1.863903e-56 | -8.615850e-47 |
| Msa0185400 | Msa0790400 | 0.810723 | 1.000490e-50 | -8.615850e-47 |
| Msa0185400 | Msa0797750 | 0.837026 | 6.624228e-57 | -8.615850e-47 |
| Msa0185400 | Msa0808800 | 0.803023 | 4.247480e-49 | -8.615850e-47 |
| Msa0185400 | Msa0819540 | 0.829753 | 4.315147e-55 | -8.615850e-47 |
| Msa0185400 | Msa0822170 | 0.801355 | 9.362053e-49 | -8.615850e-47 |
| Msa0185400 | Msa0824640 | 0.851728 | 7.344544e-61 | -8.615850e-47 |
| Msa0185400 | Msa0830880 | 0.806914 | 6.526447e-50 | -8.615850e-47 |
| Msa0185400 | Msa0832700 | 0.805668 | 1.194684e-49 | -8.615850e-47 |
| Msa0185400 | Msa0856050 | 0.822190 | 2.703993e-53 | -8.615850e-47 |
| Msa0185400 | Msa0864010 | 0.856870 | 2.400763e-62 | -8.615850e-47 |
| Msa0185400 | Msa0869010 | 0.801356 | 9.359547e-49 | -8.615850e-47 |
| Msa0185400 | Msa0869100 | 0.816177 | 6.324698e-52 | -8.615850e-47 |
| Msa0185400 | Msa0880450 | 0.827365 | 1.628726e-54 | -8.615850e-47 |
| Msa0185400 | Msa0888940 | 0.841702 | 4.047928e-58 | -8.615850e-47 |
| Msa0185400 | Msa0897400 | 0.818750 | 1.665640e-52 | -8.615850e-47 |
| Msa0185400 | Msa0898760 | 0.849924 | 2.366013e-60 | -8.615850e-47 |
| Msa0185400 | Msa0903780 | 0.800169 | 1.635239e-48 | -8.615850e-47 |
| Msa0185400 | Msa0928120 | 0.829501 | 4.968982e-55 | -8.615850e-47 |
| Msa0185400 | Msa0943170 | 0.878470 | 2.736051e-69 | -8.615850e-47 |
| Msa0185400 | Msa0963020 | 0.833227 | 6.020005e-56 | -8.615850e-47 |
| Msa0185400 | Msa0966270 | 0.804772 | 1.840285e-49 | -8.615850e-47 |
| Msa0185400 | Msa0980940 | 0.833305 | 5.757158e-56 | -8.615850e-47 |
| Msa0185400 | Msa1004420 | 0.818723 | 1.689347e-52 | -8.615850e-47 |
| Msa0185400 | Msa1005820 | 0.806339 | 8.631277e-50 | -8.615850e-47 |
| Msa0185400 | Msa1012720 | 0.804746 | 1.863274e-49 | -8.615850e-47 |
| Msa0185400 | Msa1019240 | 0.804935 | 1.700886e-49 | -8.615850e-47 |
| Msa0185400 | Msa1019260 | 0.808190 | 3.497365e-50 | -8.615850e-47 |
| Msa0185400 | Msa1025940 | 0.811631 | 6.355432e-51 | -8.615850e-47 |
| Msa0185400 | Msa1035230 | 0.813204 | 2.880694e-51 | -8.615850e-47 |
| Msa0185400 | Msa1037510 | 0.831510 | 1.602539e-55 | -8.615850e-47 |
| Msa0185400 | Msa1059960 | 0.807115 | 5.917965e-50 | -8.615850e-47 |
| Msa0185400 | Msa1083880 | 0.814785 | 1.291148e-51 | -8.615850e-47 |
| Msa0185400 | Msa1104210 | 0.808562 | 2.914051e-50 | -8.615850e-47 |
| Msa0185400 | Msa1105160 | 0.804495 | 2.101715e-49 | -8.615850e-47 |
| Msa0185400 | Msa1119200 | 0.800186 | 1.621982e-48 | -8.615850e-47 |
| Msa0185400 | Msa1123350 | 0.821970 | 3.041272e-53 | -8.615850e-47 |
| Msa0185400 | Msa1124110 | 0.802902 | 4.500667e-49 | -8.615850e-47 |
| Msa0185400 | Msa1126510 | 0.823179 | 1.591867e-53 | -8.615850e-47 |
| Msa0185400 | Msa1126770 | 0.822604 | 2.167506e-53 | -8.615850e-47 |
| Msa0185400 | Msa1127540 | 0.800418 | 1.455016e-48 | -8.615850e-47 |
| Msa0185400 | Msa1127590 | 0.805757 | 1.144131e-49 | -8.615850e-47 |
| Msa0185400 | Msa1127890 | 0.801883 | 7.297964e-49 | -8.615850e-47 |
| Msa0185400 | Msa1130980 | 0.806051 | 9.925041e-50 | -8.615850e-47 |
| Msa0185400 | Msa1131560 | 0.847673 | 9.967897e-60 | -8.615850e-47 |
| Msa0185400 | Msa1143650 | 0.818542 | 1.856661e-52 | -8.615850e-47 |
| Msa0185400 | Msa1154490 | 0.802291 | 6.014911e-49 | -8.615850e-47 |
| Msa0185400 | Msa1166330 | 0.830008 | 3.739859e-55 | -8.615850e-47 |
| Msa0185400 | Msa1166340 | 0.829029 | 6.467394e-55 | -8.615850e-47 |
| Msa0185400 | Msa1166860 | 0.808999 | 2.349939e-50 | -8.615850e-47 |
| Msa0185400 | Msa1166870 | 0.814970 | 1.174612e-51 | -8.615850e-47 |
| Msa0185400 | Msa1168950 | 0.801446 | 8.970341e-49 | -8.615850e-47 |
| Msa0185400 | Msa1169040 | 0.814874 | 1.233473e-51 | -8.615850e-47 |
| Msa0185400 | Msa1174100 | 0.820663 | 6.090621e-53 | -8.615850e-47 |
| Msa0185400 | Msa1174530 | 0.835465 | 1.652162e-56 | -8.615850e-47 |
| Msa0185400 | Msa1179950 | 0.824245 | 8.960522e-54 | -8.615850e-47 |
| Msa0185400 | Msa1179980 | 0.828144 | 1.058248e-54 | -8.615850e-47 |
| Msa0185400 | Msa1184370 | 0.847466 | 1.135869e-59 | -8.615850e-47 |
| Msa0185400 | Msa1186530 | 0.802852 | 4.607604e-49 | -8.615850e-47 |
| Msa0185400 | Msa1199290 | 0.836479 | 9.135338e-57 | -8.615850e-47 |
| Msa0185400 | Msa1201830 | 0.840064 | 1.088823e-57 | -8.615850e-47 |
| Msa0185400 | Msa1204830 | 0.806924 | 6.494506e-50 | -8.615850e-47 |
| Msa0185400 | Msa1204850 | 0.821691 | 3.528727e-53 | -8.615850e-47 |
| Msa0185400 | Msa1206650 | 0.806556 | 7.766676e-50 | -8.615850e-47 |
| Msa0185400 | Msa1211830 | 0.803102 | 4.091225e-49 | -8.615850e-47 |
| Msa0185400 | Msa1224840 | 0.824874 | 6.369782e-54 | -8.615850e-47 |
| Msa0185400 | Msa1227690 | 0.862513 | 4.806120e-64 | -8.615850e-47 |
| Msa0185400 | Msa1235250 | 0.849527 | 3.054926e-60 | -8.615850e-47 |
| Msa0185400 | Msa1246430 | 0.806815 | 6.848109e-50 | -8.615850e-47 |
| Msa0185400 | Msa1252190 | 0.839053 | 1.994429e-57 | -8.615850e-47 |
| Msa0185400 | Msa1253810 | 0.801526 | 8.638787e-49 | -8.615850e-47 |
| Msa0185400 | Msa1254710 | 0.819315 | 1.238660e-52 | -8.615850e-47 |
| Msa0185400 | Msa1255410 | 0.812293 | 4.559077e-51 | -8.615850e-47 |
| Msa0185400 | Msa1258710 | 0.813582 | 2.379684e-51 | -8.615850e-47 |
| Msa0185400 | Msa1270620 | 0.831002 | 2.136723e-55 | -8.615850e-47 |
| Msa0185400 | Msa1270690 | 0.827903 | 1.209793e-54 | -8.615850e-47 |
| Msa0185400 | Msa1271580 | 0.800892 | 1.164548e-48 | -8.615850e-47 |
| Msa0185400 | Msa1279590 | 0.809103 | 2.231966e-50 | -8.615850e-47 |
| Msa0185400 | Msa1286510 | 0.803934 | 2.750259e-49 | -8.615850e-47 |
| Msa0185400 | Msa1292830 | 0.830459 | 2.901998e-55 | -8.615850e-47 |
| Msa0185400 | Msa1294840 | 0.830141 | 3.470513e-55 | -8.615850e-47 |
| Msa0185400 | Msa1306990 | 0.834629 | 2.683675e-56 | -8.615850e-47 |
| Msa0185400 | Msa1307950 | 0.830197 | 3.363247e-55 | -8.615850e-47 |
| Msa0185400 | Msa1310690 | 0.802153 | 6.421122e-49 | -8.615850e-47 |
| Msa0185400 | Msa1328640 | 0.812531 | 4.046683e-51 | -8.615850e-47 |
| Msa0185400 | Msa1333560 | 0.804878 | 1.748772e-49 | -8.615850e-47 |
| Msa0185400 | Msa1356610 | 0.818215 | 2.201744e-52 | -8.615850e-47 |
| Msa0185400 | Msa1363860 | 0.843786 | 1.131040e-58 | -8.615850e-47 |
| Msa0185400 | Msa1365150 | 0.827400 | 1.597524e-54 | -8.615850e-47 |
| Msa0185400 | Msa1367590 | 0.817099 | 3.930256e-52 | -8.615850e-47 |
| Msa0185400 | Msa1367880 | 0.820019 | 8.555777e-53 | -8.615850e-47 |
| Msa0185400 | Msa1369150 | 0.846977 | 1.547446e-59 | -8.615850e-47 |
| Msa0185400 | Msa1370860 | 0.821143 | 4.723126e-53 | -8.615850e-47 |
| Msa0185400 | Msa1374060 | 0.809461 | 1.870362e-50 | -8.615850e-47 |
| Msa0185400 | Msa1376650 | 0.817591 | 3.045917e-52 | -8.615850e-47 |
| Msa0185400 | Msa1380970 | 0.819138 | 1.359040e-52 | -8.615850e-47 |
| Msa0185400 | Msa1381120 | 0.979012 | 4.834842e-147 | -8.615850e-47 |
| Msa0185400 | Msa1389680 | 0.806200 | 9.232456e-50 | -8.615850e-47 |
| Msa0185400 | Msa1397810 | 0.804555 | 2.042197e-49 | -8.615850e-47 |
| Msa0185400 | Msa1404190 | 0.810883 | 9.235661e-51 | -8.615850e-47 |
| Msa0185400 | Msa1411950 | 0.812010 | 5.257418e-51 | -8.615850e-47 |
| Msa0185400 | Msa1418340 | 0.809089 | 2.247917e-50 | -8.615850e-47 |
| Msa0185400 | Msa1421560 | 0.821707 | 3.499271e-53 | -8.615850e-47 |
| Msa0185400 | Msa1422580 | 0.801720 | 7.881844e-49 | -8.615850e-47 |
| Msa0185400 | Msa1427060 | 0.804740 | 1.868359e-49 | -8.615850e-47 |
| Msa0185400 | Msa1438640 | 0.834995 | 2.170924e-56 | -8.615850e-47 |
| Msa0185400 | Msa1442850 | 0.833377 | 5.523936e-56 | -8.615850e-47 |
| Msa0185400 | Msa1443300 | 0.806295 | 8.817409e-50 | -8.615850e-47 |
| Msa0185400 | Msa1443930 | 0.842601 | 2.340174e-58 | -8.615850e-47 |
| Msa0185400 | Msa1457400 | 0.808052 | 3.742063e-50 | -8.615850e-47 |
| Msa0185400 | Msa1459960 | 0.802580 | 5.244378e-49 | -8.615850e-47 |
| Msa0185400 | Msa1462860 | 0.812241 | 4.681350e-51 | -8.615850e-47 |
| Msa0185400 | Msa1465080 | 0.825320 | 4.999645e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185400 | MtrunA17_Chr6g0488901 | 89.767 | 215 | 14 | 4 | 1 | 208 | 1 | 214 | 2.82e-120 | 340 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185400 | AT5G58110.1 | 58.163 | 196 | 79 | 2 | 14 | 208 | 3 | 196 | 7.97e-75 | 224 |
Find 44 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCGTCGTCGTATACTTAT+TGG | 0.221609 | 1_4:-75552853 | Msa0185400:CDS |
| TGTTACTTCTTCTCATCAAT+TGG | 0.222046 | 1_4:-75552762 | Msa0185400:CDS |
| CTTTGAGTTCTTGTTCAAAT+TGG | 0.226142 | 1_4:+75550005 | None:intergenic |
| TTGGGCTATTCCTAGAATTA+AGG | 0.262161 | 1_4:-75552690 | Msa0185400:intron |
| ATGACGTCACTCCTCCATTA+AGG | 0.273220 | 1_4:+75552906 | None:intergenic |
| AGTAAGTAAACCTTAATTCT+AGG | 0.282854 | 1_4:+75552680 | None:intergenic |
| GAATCAATGGAGTCCCTTAA+TGG | 0.345099 | 1_4:-75552920 | Msa0185400:exon |
| GTTACTTCTTCTCATCAATT+GGG | 0.369463 | 1_4:-75552761 | Msa0185400:CDS |
| CTCATCAATTGGGTTCTGCT+TGG | 0.379523 | 1_4:-75552751 | Msa0185400:CDS |
| GGAGATCTCATTTGGTGAAC+TGG | 0.386323 | 1_4:-75552048 | Msa0185400:CDS |
| TGGTGAACTGGATGACTTGC+AGG | 0.392831 | 1_4:-75552036 | Msa0185400:intron |
| ACTAACATCTCCAACACATT+TGG | 0.402013 | 1_4:+75552513 | None:intergenic |
| CTTGGAATCGTGCTGGCACT+TGG | 0.404894 | 1_4:-75552733 | Msa0185400:CDS |
| AGCGTCGTCGTATACTTATT+GGG | 0.412195 | 1_4:-75552852 | Msa0185400:CDS |
| GATGTTCCGGAGATCTCATT+TGG | 0.428887 | 1_4:-75552056 | Msa0185400:CDS |
| CAGGAATTGCTCATTTCTGT+GGG | 0.441867 | 1_4:-75552586 | Msa0185400:CDS |
| TCTGCCAGAGGAGAATGATA+TGG | 0.453679 | 1_4:+75552561 | None:intergenic |
| TCAGGAATTGCTCATTTCTG+TGG | 0.456847 | 1_4:-75552587 | Msa0185400:intron |
| TGACGTCACTCCTCCATTAA+GGG | 0.458538 | 1_4:+75552907 | None:intergenic |
| AAGAGAAATCTCTTAACCAT+TGG | 0.487347 | 1_4:-75552709 | Msa0185400:CDS |
| AGAGAAATCTCTTAACCATT+GGG | 0.488159 | 1_4:-75552708 | Msa0185400:CDS |
| AAGAACTCAAAGATAGATAG+TGG | 0.488748 | 1_4:-75549994 | Msa0185400:three_prime_UTR |
| AAGAACTCAAAGATAGATAG+TGG | 0.501118 | 1_4:-75550036 | Msa0185400:exon |
| GGCGTTTGTTGAAGAATCAA+TGG | 0.504390 | 1_4:-75552933 | Msa0185400:exon |
| GGTTCCATATCATTCTCCTC+TGG | 0.510440 | 1_4:-75552565 | Msa0185400:CDS |
| TACAATTGGATACAGGGGAA+TGG | 0.527980 | 1_4:-75552118 | Msa0185400:intron |
| TTATTTATTATAGGCACTTG+TGG | 0.531337 | 1_4:-75552295 | Msa0185400:intron |
| GGTTCTGCTTGGAATCGTGC+TGG | 0.531758 | 1_4:-75552740 | Msa0185400:CDS |
| ATATCATTCTCCTCTGGCAG+AGG | 0.546286 | 1_4:-75552559 | Msa0185400:CDS |
| AATTGAGAACAACGTCTACA+TGG | 0.561907 | 1_4:+75549965 | None:intergenic |
| GAACTGTCCTTAAAAGTGAA+AGG | 0.563372 | 1_4:-75552234 | Msa0185400:intron |
| AGTTCACCAAATGAGATCTC+CGG | 0.570544 | 1_4:+75552050 | None:intergenic |
| CAAGATGTAACCAAATGTGT+TGG | 0.572691 | 1_4:-75552523 | Msa0185400:CDS |
| TCTTGATGAGAGATATCCGA+TGG | 0.586576 | 1_4:+75550130 | None:intergenic |
| GTCATCGTCGTCGAAATCGA+AGG | 0.588472 | 1_4:-75552888 | Msa0185400:CDS |
| TTGTGCTGTGCCTCTGCCAG+AGG | 0.600109 | 1_4:+75552549 | None:intergenic |
| TTGGAATCGTGCTGGCACTT+GGG | 0.601928 | 1_4:-75552732 | Msa0185400:CDS |
| TTTATTATAGGCACTTGTGG+TGG | 0.610822 | 1_4:-75552292 | Msa0185400:intron |
| ACAGGGGAATGGATTATACA+AGG | 0.613504 | 1_4:-75552107 | Msa0185400:intron |
| AGTGAGACTTAGTGAACCAT+CGG | 0.617002 | 1_4:-75550146 | Msa0185400:CDS |
| TTGTACTCGGATCGATCTAG+AGG | 0.622502 | 1_4:-75553005 | Msa0185400:five_prime_UTR |
| TAATTCTAGGAATAGCCCAA+TGG | 0.650376 | 1_4:+75552693 | None:intergenic |
| TCAATGGAGTCCCTTAATGG+AGG | 0.676249 | 1_4:-75552917 | Msa0185400:CDS |
| TGAGTGAGTTGAAGTACGAG+CGG | 0.714496 | 1_4:-75552954 | Msa0185400:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTTATTTATTTATTAT+AGG | - | chr1_4:75550665-75550684 | Msa0185400:intron | 0.0% |
| !! | TTAATTTCACTATTATAAAT+TGG | + | chr1_4:75551541-75551560 | None:intergenic | 10.0% |
| !!! | TAAAATTCAGTATTTAAAAT+TGG | + | chr1_4:75551658-75551677 | None:intergenic | 10.0% |
| !!! | TTGATTATTTCAATTTTAAC+TGG | - | chr1_4:75551701-75551720 | Msa0185400:intron | 15.0% |
| !! | AAAGAATTAATTAATGTACA+TGG | + | chr1_4:75552141-75552160 | None:intergenic | 15.0% |
| !! | ATATAAAATAAATAAGGGTA+TGG | + | chr1_4:75552168-75552187 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCATTATACAGA+TGG | - | chr1_4:75552799-75552818 | Msa0185400:CDS | 15.0% |
| !! | TAGAATTTGAATTTGAAGAT+AGG | + | chr1_4:75550506-75550525 | None:intergenic | 20.0% |
| !!! | TATAAGTGATGTTTTACAAT+TGG | - | chr1_4:75550837-75550856 | Msa0185400:intron | 20.0% |
| !! | GTGTTAAAATCAATAATAAG+AGG | + | chr1_4:75550961-75550980 | None:intergenic | 20.0% |
| !! | ATTTAAATCAATATCCTTCT+CGG | + | chr1_4:75551307-75551326 | None:intergenic | 20.0% |
| !!! | ATTTGGTGAGAATTATAATT+GGG | - | chr1_4:75551474-75551493 | Msa0185400:intron | 20.0% |
| !! | TTCACTATTATAAATTGGTA+GGG | + | chr1_4:75551536-75551555 | None:intergenic | 20.0% |
| !! | TTTCACTATTATAAATTGGT+AGG | + | chr1_4:75551537-75551556 | None:intergenic | 20.0% |
| !!! | TTCAGTATTTAAAATTGGTA+GGG | + | chr1_4:75551653-75551672 | None:intergenic | 20.0% |
| !!! | ATTCAGTATTTAAAATTGGT+AGG | + | chr1_4:75551654-75551673 | None:intergenic | 20.0% |
| !!! | ATTTTTGTACATAACATGTT+TGG | - | chr1_4:75551960-75551979 | Msa0185400:intron | 20.0% |
| !! | AATCGATATAATGATCAAAA+GGG | + | chr1_4:75552497-75552516 | None:intergenic | 20.0% |
| !! | AACGGTTATATAAATCAATA+CGG | + | chr1_4:75552695-75552714 | None:intergenic | 20.0% |
| ! | AGTAAGTAAACCTTAATTCT+AGG | + | chr1_4:75550292-75550311 | None:intergenic | 25.0% |
| !!! | TCATTTTGTTACTTTGTTTC+AGG | - | chr1_4:75550364-75550383 | Msa0185400:intron | 25.0% |
| ! | TTATTTATTATAGGCACTTG+TGG | - | chr1_4:75550674-75550693 | Msa0185400:intron | 25.0% |
| !! | ATGTTTTACAATTGGATACA+GGG | - | chr1_4:75550845-75550864 | Msa0185400:intron | 25.0% |
| ! | AAGGAAATAAAAAGTTGCTT+GGG | - | chr1_4:75550881-75550900 | Msa0185400:intron | 25.0% |
| !!! | GAGAAGGATATTGATTTAAA+TGG | - | chr1_4:75551306-75551325 | Msa0185400:intron | 25.0% |
| ! | TCATTCACACTAGATTATTA+TGG | - | chr1_4:75551346-75551365 | Msa0185400:intron | 25.0% |
| ! | AAGCATTTGTATTGAGAATA+GGG | - | chr1_4:75551431-75551450 | Msa0185400:intron | 25.0% |
| !! | CATTTGGTGAGAATTATAAT+TGG | - | chr1_4:75551473-75551492 | Msa0185400:intron | 25.0% |
| ! | TGAGAATTATAATTGGGATT+AGG | - | chr1_4:75551480-75551499 | Msa0185400:intron | 25.0% |
| ! | GAGAATTATAATTGGGATTA+GGG | - | chr1_4:75551481-75551500 | Msa0185400:intron | 25.0% |
| !!! | ACACTTACAATTCTAGTTTT+GGG | + | chr1_4:75551769-75551788 | None:intergenic | 25.0% |
| !!! | TACACTTACAATTCTAGTTT+TGG | + | chr1_4:75551770-75551789 | None:intergenic | 25.0% |
| ! | GAACACACAAAAATTTATGT+TGG | - | chr1_4:75551816-75551835 | Msa0185400:intron | 25.0% |
| !!! | AGACAAATTTTTTTCCCAAA+GGG | + | chr1_4:75552092-75552111 | None:intergenic | 25.0% |
| ! | GGAATTAAGAAAATTGAAAG+TGG | + | chr1_4:75552296-75552315 | None:intergenic | 25.0% |
| !! | TCTATTTTCCTTTGTACTAT+AGG | - | chr1_4:75552420-75552439 | Msa0185400:intron | 25.0% |
| ! | GAATCGATATAATGATCAAA+AGG | + | chr1_4:75552498-75552517 | None:intergenic | 25.0% |
| ! | TGTTACTTCTTCTCATCAAT+TGG | - | chr1_4:75550207-75550226 | Msa0185400:intron | 30.0% |
| GTTACTTCTTCTCATCAATT+GGG | - | chr1_4:75550208-75550227 | Msa0185400:intron | 30.0% | |
| AAGAGAAATCTCTTAACCAT+TGG | - | chr1_4:75550260-75550279 | Msa0185400:intron | 30.0% | |
| AGAGAAATCTCTTAACCATT+GGG | - | chr1_4:75550261-75550280 | Msa0185400:intron | 30.0% | |
| GAATGAAAGAGTAATTGACT+CGG | + | chr1_4:75550333-75550352 | None:intergenic | 30.0% | |
| GCAAAGTAAAGAAGAACAAT+TGG | + | chr1_4:75550799-75550818 | None:intergenic | 30.0% | |
| ! | GATGTTTTACAATTGGATAC+AGG | - | chr1_4:75550844-75550863 | Msa0185400:intron | 30.0% |
| ! | TGTTTTACAATTGGATACAG+GGG | - | chr1_4:75550846-75550865 | Msa0185400:intron | 30.0% |
| CAAGGAAATAAAAAGTTGCT+TGG | - | chr1_4:75550880-75550899 | Msa0185400:intron | 30.0% | |
| AGGAAATAAAAAGTTGCTTG+GGG | - | chr1_4:75550882-75550901 | Msa0185400:intron | 30.0% | |
| !!! | TGGATTTTGGGTTTTTTGTA+TGG | - | chr1_4:75551032-75551051 | Msa0185400:intron | 30.0% |
| GGCATAAACCAAATGAAAAA+AGG | + | chr1_4:75551063-75551082 | None:intergenic | 30.0% | |
| !! | TGTCGTAATTTGTTCTGTTA+CGG | + | chr1_4:75551084-75551103 | None:intergenic | 30.0% |
| TAAAATTGTCTTCCGTGATT+TGG | - | chr1_4:75551201-75551220 | Msa0185400:intron | 30.0% | |
| AAAATTGTCTTCCGTGATTT+GGG | - | chr1_4:75551202-75551221 | Msa0185400:intron | 30.0% | |
| ! | TATCAGTGAGATTAGCTATA+AGG | + | chr1_4:75551380-75551399 | None:intergenic | 30.0% |
| CAAGCATTTGTATTGAGAAT+AGG | - | chr1_4:75551430-75551449 | Msa0185400:intron | 30.0% | |
| AATTATAATTGGGATTAGGG+AGG | - | chr1_4:75551484-75551503 | Msa0185400:intron | 30.0% | |
| ATTATAATTGGGATTAGGGA+GGG | - | chr1_4:75551485-75551504 | Msa0185400:intron | 30.0% | |
| ! | TTAGATCTCTTTTTGTGGTT+TGG | - | chr1_4:75551510-75551529 | Msa0185400:intron | 30.0% |
| AATACTCCTTGTATTATACG+TGG | - | chr1_4:75551622-75551641 | Msa0185400:intron | 30.0% | |
| TCAAAAGTTGTCTTCAAAAC+TGG | + | chr1_4:75551871-75551890 | None:intergenic | 30.0% | |
| AAGATCATAATCTATGTGGT+GGG | + | chr1_4:75552021-75552040 | None:intergenic | 30.0% | |
| AAAGATCATAATCTATGTGG+TGG | + | chr1_4:75552022-75552041 | None:intergenic | 30.0% | |
| CAGAAAGATCATAATCTATG+TGG | + | chr1_4:75552025-75552044 | None:intergenic | 30.0% | |
| CTTAATTATAAGACCCCTTT+GGG | - | chr1_4:75552075-75552094 | Msa0185400:CDS | 30.0% | |
| !!! | GACAAATTTTTTTCCCAAAG+GGG | + | chr1_4:75552091-75552110 | None:intergenic | 30.0% |
| !!! | GAGACAAATTTTTTTCCCAA+AGG | + | chr1_4:75552093-75552112 | None:intergenic | 30.0% |
| ATGTACATGGAAATAGCAAA+GGG | + | chr1_4:75552128-75552147 | None:intergenic | 30.0% | |
| AATGTACATGGAAATAGCAA+AGG | + | chr1_4:75552129-75552148 | None:intergenic | 30.0% | |
| !!! | ATTCCCGTTATTTTTCCAAA+AGG | - | chr1_4:75552311-75552330 | Msa0185400:intron | 30.0% |
| !!! | TTCCCGTTATTTTTCCAAAA+GGG | - | chr1_4:75552312-75552331 | Msa0185400:intron | 30.0% |
| ACTTCAAAATCAACTACAAC+AGG | + | chr1_4:75552396-75552415 | None:intergenic | 30.0% | |
| AAAGAATGCCTATAGTACAA+AGG | + | chr1_4:75552431-75552450 | None:intergenic | 30.0% | |
| TACTATAGGCATTCTTTACA+AGG | - | chr1_4:75552434-75552453 | Msa0185400:intron | 30.0% | |
| !! | AGGGCTTTATTTGGAAAATT+TGG | + | chr1_4:75552549-75552568 | None:intergenic | 30.0% |
| !! | GTAAGAATAAGGGCTTTATT+TGG | + | chr1_4:75552558-75552577 | None:intergenic | 30.0% |
| GGTTCAATAGGTAAGAATAA+GGG | + | chr1_4:75552568-75552587 | None:intergenic | 30.0% | |
| !! | AAAAGAATAAGGGTTGATGT+AGG | + | chr1_4:75552600-75552619 | None:intergenic | 30.0% |
| CGAGTACACAAAAAGAATAA+GGG | + | chr1_4:75552610-75552629 | None:intergenic | 30.0% | |
| ACGAGTACACAAAAAGAATA+AGG | + | chr1_4:75552611-75552630 | None:intergenic | 30.0% | |
| TGTGTACTCGTTTAATCATT+AGG | - | chr1_4:75552620-75552639 | Msa0185400:intron | 30.0% | |
| GTGTACTCGTTTAATCATTA+GGG | - | chr1_4:75552621-75552640 | Msa0185400:intron | 30.0% | |
| TCGTTTAATCATTAGGGTTA+GGG | - | chr1_4:75552627-75552646 | Msa0185400:intron | 30.0% | |
| AAGAACTCAAAGATAGATAG+TGG | - | chr1_4:75552933-75552952 | Msa0185400:exon | 30.0% | |
| ! | CTTTGAGTTCTTGTTCAAAT+TGG | + | chr1_4:75552925-75552944 | None:intergenic | 30.0% |
| AAGAACTCAAAGATAGATAG+TGG | - | chr1_4:75552933-75552952 | Msa0185400:exon | 30.0% | |
| ! | TAATTCTAGGAATAGCCCAA+TGG | + | chr1_4:75550279-75550298 | None:intergenic | 35.0% |
| TTGGGCTATTCCTAGAATTA+AGG | - | chr1_4:75550279-75550298 | Msa0185400:intron | 35.0% | |
| CAAGATGTAACCAAATGTGT+TGG | - | chr1_4:75550446-75550465 | Msa0185400:intron | 35.0% | |
| ACTAACATCTCCAACACATT+TGG | + | chr1_4:75550459-75550478 | None:intergenic | 35.0% | |
| TTTATTATAGGCACTTGTGG+TGG | - | chr1_4:75550677-75550696 | Msa0185400:intron | 35.0% | |
| GAACTGTCCTTAAAAGTGAA+AGG | - | chr1_4:75550735-75550754 | Msa0185400:intron | 35.0% | |
| !! | TGACTCACCTTTCACTTTTA+AGG | + | chr1_4:75550745-75550764 | None:intergenic | 35.0% |
| ATTTACCTTACTCTTCGTGT+TGG | - | chr1_4:75550764-75550783 | Msa0185400:intron | 35.0% | |
| GGAAATAAAAAGTTGCTTGG+GGG | - | chr1_4:75550883-75550902 | Msa0185400:intron | 35.0% | |
| GAAATAAAAAGTTGCTTGGG+GGG | - | chr1_4:75550884-75550903 | Msa0185400:intron | 35.0% | |
| TTACATGTCTAGACGTTGAT+TGG | - | chr1_4:75551012-75551031 | Msa0185400:intron | 35.0% | |
| !! | TCTAGACGTTGATTGGATTT+TGG | - | chr1_4:75551019-75551038 | Msa0185400:intron | 35.0% |
| !! | CTAGACGTTGATTGGATTTT+GGG | - | chr1_4:75551020-75551039 | Msa0185400:intron | 35.0% |
| !!! | TGGTTCGTCCTTTTTTCATT+TGG | - | chr1_4:75551052-75551071 | Msa0185400:intron | 35.0% |
| AATTACGACACTATGCTAGT+AGG | - | chr1_4:75551094-75551113 | Msa0185400:intron | 35.0% | |
| TGTTCTCCCAATATATGCAT+TGG | - | chr1_4:75551125-75551144 | Msa0185400:intron | 35.0% | |
| CTAATCTCACTGATAGAAAC+TGG | - | chr1_4:75551385-75551404 | Msa0185400:intron | 35.0% | |
| TGAGAAGGATGGTATTCATT+TGG | - | chr1_4:75551457-75551476 | Msa0185400:intron | 35.0% | |
| !!! | GGGTTTTAGATCTCTTTTTG+TGG | - | chr1_4:75551505-75551524 | Msa0185400:intron | 35.0% |
| TTGTCTTCAAAACTGGATGT+AGG | + | chr1_4:75551864-75551883 | None:intergenic | 35.0% | |
| ! | ATAATCTATGTGGTGGGATA+AGG | + | chr1_4:75552015-75552034 | None:intergenic | 35.0% |
| ! | AGGGGTCTTATAATTAAGGA+CGG | + | chr1_4:75552073-75552092 | None:intergenic | 35.0% |
| ! | CCAAAGGGGTCTTATAATTA+AGG | + | chr1_4:75552077-75552096 | None:intergenic | 35.0% |
| CCTTAATTATAAGACCCCTT+TGG | - | chr1_4:75552074-75552093 | Msa0185400:CDS | 35.0% | |
| TGTACATGGAAATAGCAAAG+GGG | + | chr1_4:75552127-75552146 | None:intergenic | 35.0% | |
| AAACCAACTCTCTCTCTTAA+AGG | - | chr1_4:75552228-75552247 | Msa0185400:intron | 35.0% | |
| ! | TATCCTTTAAGAGAGAGAGT+TGG | + | chr1_4:75552234-75552253 | None:intergenic | 35.0% |
| AAATCAACTACAACAGGACA+TGG | + | chr1_4:75552390-75552409 | None:intergenic | 35.0% | |
| TAATGATCAAAAGGGTCAAC+TGG | + | chr1_4:75552489-75552508 | None:intergenic | 35.0% | |
| !! | CATTAATGCTGGTGGATTAA+GGG | + | chr1_4:75552526-75552545 | None:intergenic | 35.0% |
| AAATTTGGCATTAATGCTGG+TGG | + | chr1_4:75552534-75552553 | None:intergenic | 35.0% | |
| GGAAAATTTGGCATTAATGC+TGG | + | chr1_4:75552537-75552556 | None:intergenic | 35.0% | |
| GGGTTCAATAGGTAAGAATA+AGG | + | chr1_4:75552569-75552588 | None:intergenic | 35.0% | |
| CTCGTTTAATCATTAGGGTT+AGG | - | chr1_4:75552626-75552645 | Msa0185400:intron | 35.0% | |
| GAGTTAATAACACGTGCAAA+CGG | + | chr1_4:75552713-75552732 | None:intergenic | 35.0% | |
| !!! | AGCTATTTTTACAGCCTGTT+CGG | - | chr1_4:75552888-75552907 | Msa0185400:CDS | 35.0% |
| ! | GGCGTTTGTTGAAGAATCAA+TGG | - | chr1_4:75550036-75550055 | Msa0185400:exon | 40.0% |
| GAATCAATGGAGTCCCTTAA+TGG | - | chr1_4:75550049-75550068 | Msa0185400:CDS | 40.0% | |
| AGCGTCGTCGTATACTTATT+GGG | - | chr1_4:75550117-75550136 | Msa0185400:CDS | 40.0% | |
| ! | AGCTTTTGTGGAACAGGTAA+AGG | + | chr1_4:75550169-75550188 | None:intergenic | 40.0% |
| ! | GATTGTTGCTGTAGCTTTTG+TGG | + | chr1_4:75550181-75550200 | None:intergenic | 40.0% |
| !! | AAGAGTAATTGACTCGGTGT+AGG | + | chr1_4:75550327-75550346 | None:intergenic | 40.0% |
| TCAGGAATTGCTCATTTCTG+TGG | - | chr1_4:75550382-75550401 | Msa0185400:intron | 40.0% | |
| CAGGAATTGCTCATTTCTGT+GGG | - | chr1_4:75550383-75550402 | Msa0185400:intron | 40.0% | |
| CATCGATCTGTCTCATACAT+TGG | + | chr1_4:75550632-75550651 | None:intergenic | 40.0% | |
| TACAATTGGATACAGGGGAA+TGG | - | chr1_4:75550851-75550870 | Msa0185400:intron | 40.0% | |
| !! | ACAGGGGAATGGATTATACA+AGG | - | chr1_4:75550862-75550881 | Msa0185400:intron | 40.0% |
| AGTTCACCAAATGAGATCTC+CGG | + | chr1_4:75550922-75550941 | None:intergenic | 40.0% | |
| !!! | CACTTTTCAGACACTGACTT+TGG | - | chr1_4:75550978-75550997 | Msa0185400:intron | 40.0% |
| !! | TCAGACACTGACTTTGGAAA+TGG | - | chr1_4:75550984-75551003 | Msa0185400:intron | 40.0% |
| CGTGCACCAATGCATATATT+GGG | + | chr1_4:75551134-75551153 | None:intergenic | 40.0% | |
| ACGTGCACCAATGCATATAT+TGG | + | chr1_4:75551135-75551154 | None:intergenic | 40.0% | |
| CTTAATAGCCACACATGTTG+TGG | - | chr1_4:75551169-75551188 | Msa0185400:intron | 40.0% | |
| ! | CATCTTTTCCACAACATGTG+TGG | + | chr1_4:75551180-75551199 | None:intergenic | 40.0% |
| CTACATACAAGCCCAAATCA+CGG | + | chr1_4:75551216-75551235 | None:intergenic | 40.0% | |
| GATTTGGGCTTGTATGTAGA+AGG | - | chr1_4:75551217-75551236 | Msa0185400:intron | 40.0% | |
| GGGAGATCAAGAAAAACCTT+AGG | - | chr1_4:75551273-75551292 | Msa0185400:intron | 40.0% | |
| ! | TCACTGATAGAAACTGGTTC+AGG | - | chr1_4:75551391-75551410 | Msa0185400:intron | 40.0% |
| GCGAAACCACGTATAATACA+AGG | + | chr1_4:75551631-75551650 | None:intergenic | 40.0% | |
| GTTAAGCCACTAAAGTCTTG+TGG | - | chr1_4:75551838-75551857 | Msa0185400:intron | 40.0% | |
| TTAAGGACGGAGGTAGTAAT+TGG | + | chr1_4:75552060-75552079 | None:intergenic | 40.0% | |
| ! | GGTCTTATAATTAAGGACGG+AGG | + | chr1_4:75552070-75552089 | None:intergenic | 40.0% |
| !! | GGCCCTTTTGGAAAAATAAC+GGG | + | chr1_4:75552317-75552336 | None:intergenic | 40.0% |
| !! | GGGCCCTTTTGGAAAAATAA+CGG | + | chr1_4:75552318-75552337 | None:intergenic | 40.0% |
| TCCAAAAGGGCCCTATAATT+AGG | - | chr1_4:75552325-75552344 | Msa0185400:intron | 40.0% | |
| CCAAAAGGGCCCTATAATTA+GGG | - | chr1_4:75552326-75552345 | Msa0185400:intron | 40.0% | |
| TACCTCCGTCCCTAATTATA+GGG | + | chr1_4:75552338-75552357 | None:intergenic | 40.0% | |
| AACTACAACAGGACATGGAT+TGG | + | chr1_4:75552385-75552404 | None:intergenic | 40.0% | |
| !! | GCATTAATGCTGGTGGATTA+AGG | + | chr1_4:75552527-75552546 | None:intergenic | 40.0% |
| AGGACAATGAAGGGTTCAAT+AGG | + | chr1_4:75552580-75552599 | None:intergenic | 40.0% | |
| ! | GGTTGATGTAGGACAATGAA+GGG | + | chr1_4:75552589-75552608 | None:intergenic | 40.0% |
| AGTGAGACTTAGTGAACCAT+CGG | - | chr1_4:75552823-75552842 | Msa0185400:CDS | 40.0% | |
| TCTTGATGAGAGATATCCGA+TGG | + | chr1_4:75552842-75552861 | None:intergenic | 40.0% | |
| !!! | GCTATTTTTACAGCCTGTTC+GGG | - | chr1_4:75552889-75552908 | Msa0185400:CDS | 40.0% |
| ! | TGAGTGAGTTGAAGTACGAG+CGG | - | chr1_4:75550015-75550034 | Msa0185400:three_prime_UTR | 45.0% |
| TCAATGGAGTCCCTTAATGG+AGG | - | chr1_4:75550052-75550071 | Msa0185400:CDS | 45.0% | |
| TGACGTCACTCCTCCATTAA+GGG | + | chr1_4:75550065-75550084 | None:intergenic | 45.0% | |
| ATGACGTCACTCCTCCATTA+AGG | + | chr1_4:75550066-75550085 | None:intergenic | 45.0% | |
| CAGCGTCGTCGTATACTTAT+TGG | - | chr1_4:75550116-75550135 | Msa0185400:CDS | 45.0% | |
| ! | TGCTGTAGCTTTTGTGGAAC+AGG | + | chr1_4:75550175-75550194 | None:intergenic | 45.0% |
| CTCATCAATTGGGTTCTGCT+TGG | - | chr1_4:75550218-75550237 | Msa0185400:intron | 45.0% | |
| GGTTCCATATCATTCTCCTC+TGG | - | chr1_4:75550404-75550423 | Msa0185400:intron | 45.0% | |
| TCTGCCAGAGGAGAATGATA+TGG | + | chr1_4:75550411-75550430 | None:intergenic | 45.0% | |
| ATATCATTCTCCTCTGGCAG+AGG | - | chr1_4:75550410-75550429 | Msa0185400:intron | 45.0% | |
| AAGTGCCAACACGAAGAGTA+AGG | + | chr1_4:75550772-75550791 | None:intergenic | 45.0% | |
| GATGTTCCGGAGATCTCATT+TGG | - | chr1_4:75550913-75550932 | Msa0185400:intron | 45.0% | |
| ! | GGAGATCTCATTTGGTGAAC+TGG | - | chr1_4:75550921-75550940 | Msa0185400:intron | 45.0% |
| TACGACACTATGCTAGTAGG+AGG | - | chr1_4:75551097-75551116 | Msa0185400:intron | 45.0% | |
| GACCAAATAGACGACAAACC+TGG | - | chr1_4:75551246-75551265 | Msa0185400:intron | 45.0% | |
| TGCCAGGTTTGTCGTCTATT+TGG | + | chr1_4:75551251-75551270 | None:intergenic | 45.0% | |
| ATAGACGACAAACCTGGCAA+AGG | - | chr1_4:75551252-75551271 | Msa0185400:intron | 45.0% | |
| TAGACGACAAACCTGGCAAA+GGG | - | chr1_4:75551253-75551272 | Msa0185400:intron | 45.0% | |
| TTTCTTGATCTCCCTTTGCC+AGG | + | chr1_4:75551267-75551286 | None:intergenic | 45.0% | |
| CTTCTCGGTGATTTGACCTA+AGG | + | chr1_4:75551292-75551311 | None:intergenic | 45.0% | |
| CTTAGGTCAAATCACCGAGA+AGG | - | chr1_4:75551290-75551309 | Msa0185400:intron | 45.0% | |
| !! | TTGAGAATAGGGTGCTGAGA+AGG | - | chr1_4:75551442-75551461 | Msa0185400:intron | 45.0% |
| TGTAGGCCACAAGACTTTAG+TGG | + | chr1_4:75551847-75551866 | None:intergenic | 45.0% | |
| ! | CCCTAATTATAGGGCCCTTT+TGG | + | chr1_4:75552329-75552348 | None:intergenic | 45.0% |
| AAGGGCCCTATAATTAGGGA+CGG | - | chr1_4:75552330-75552349 | Msa0185400:intron | 45.0% | |
| CTACCTCCGTCCCTAATTAT+AGG | + | chr1_4:75552339-75552358 | None:intergenic | 45.0% | |
| !! | GGGTCAACTGGAGTCATTTT+AGG | + | chr1_4:75552477-75552496 | None:intergenic | 45.0% |
| !!! | TGCTGGTGGATTAAGGGTTT+TGG | + | chr1_4:75552520-75552539 | None:intergenic | 45.0% |
| !! | GGGTTGATGTAGGACAATGA+AGG | + | chr1_4:75552590-75552609 | None:intergenic | 45.0% |
| ! | TGAAGCAACTTTTCCCGAAC+AGG | + | chr1_4:75552905-75552924 | None:intergenic | 45.0% |
| !!! | AATTAATTTTTTCTTTTAAA+TGG | - | chr1_4:75551555-75551574 | Msa0185400:intron | 5.0% |
| !! | AAAAGATATAAAATAAATAA+GGG | + | chr1_4:75552173-75552192 | None:intergenic | 5.0% |
| !! | AAAAAGATATAAAATAAATA+AGG | + | chr1_4:75552174-75552193 | None:intergenic | 5.0% |
| GTCATCGTCGTCGAAATCGA+AGG | - | chr1_4:75550081-75550100 | Msa0185400:CDS | 50.0% | |
| ! | TTGGAATCGTGCTGGCACTT+GGG | - | chr1_4:75550237-75550256 | Msa0185400:intron | 50.0% |
| ! | TGGTGAACTGGATGACTTGC+AGG | - | chr1_4:75550933-75550952 | Msa0185400:intron | 50.0% |
| !! | GAATAGGGTGCTGAGAAGGA+TGG | - | chr1_4:75551446-75551465 | Msa0185400:intron | 50.0% |
| GGTTCTGCTTGGAATCGTGC+TGG | - | chr1_4:75550229-75550248 | Msa0185400:intron | 55.0% | |
| ! | CTTGGAATCGTGCTGGCACT+TGG | - | chr1_4:75550236-75550255 | Msa0185400:intron | 55.0% |
| ! | TGGGGGGCATATCGATGTTC+CGG | - | chr1_4:75550900-75550919 | Msa0185400:intron | 55.0% |
| GGCCCTATAATTAGGGACGG+AGG | - | chr1_4:75552333-75552352 | Msa0185400:intron | 55.0% | |
| TTGTGCTGTGCCTCTGCCAG+AGG | + | chr1_4:75550423-75550442 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 75549967 | 75553024 | 75549967 | ID=Msa0185400;Name=Msa0185400 |
| chr1_4 | mRNA | 75549967 | 75553024 | 75549967 | ID=Msa0185400-mRNA-1;Parent=Msa0185400;Name=Msa0185400-mRNA-1;_AED=0.06;_eAED=0.06;_QI=88|1|1|1|1|1|5|72|208 |
| chr1_4 | exon | 75549967 | 75550173 | 75549967 | ID=Msa0185400-mRNA-1:exon:25734;Parent=Msa0185400-mRNA-1 |
| chr1_4 | exon | 75552037 | 75552125 | 75552037 | ID=Msa0185400-mRNA-1:exon:25733;Parent=Msa0185400-mRNA-1 |
| chr1_4 | exon | 75552235 | 75552304 | 75552235 | ID=Msa0185400-mRNA-1:exon:25732;Parent=Msa0185400-mRNA-1 |
| chr1_4 | exon | 75552519 | 75552605 | 75552519 | ID=Msa0185400-mRNA-1:exon:25731;Parent=Msa0185400-mRNA-1 |
| chr1_4 | exon | 75552691 | 75553024 | 75552691 | ID=Msa0185400-mRNA-1:exon:25730;Parent=Msa0185400-mRNA-1 |
| chr1_4 | five_prime_UTR | 75552937 | 75553024 | 75552937 | ID=Msa0185400-mRNA-1:five_prime_utr;Parent=Msa0185400-mRNA-1 |
| chr1_4 | CDS | 75552691 | 75552936 | 75552691 | ID=Msa0185400-mRNA-1:cds;Parent=Msa0185400-mRNA-1 |
| chr1_4 | CDS | 75552519 | 75552605 | 75552519 | ID=Msa0185400-mRNA-1:cds;Parent=Msa0185400-mRNA-1 |
| chr1_4 | CDS | 75552235 | 75552304 | 75552235 | ID=Msa0185400-mRNA-1:cds;Parent=Msa0185400-mRNA-1 |
| chr1_4 | CDS | 75552037 | 75552125 | 75552037 | ID=Msa0185400-mRNA-1:cds;Parent=Msa0185400-mRNA-1 |
| chr1_4 | CDS | 75550039 | 75550173 | 75550039 | ID=Msa0185400-mRNA-1:cds;Parent=Msa0185400-mRNA-1 |
| chr1_4 | three_prime_UTR | 75549967 | 75550038 | 75549967 | ID=Msa0185400-mRNA-1:three_prime_utr;Parent=Msa0185400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
