Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1140230 | XP_003621623.1 | 99.413 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1140230 | sp|Q8VZ20|ASR3_ARATH | 48.295 | 352 | 133 | 9 | 1 | 341 | 1 | 314 | 4.60e-95 | 288 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1140230 | G7KSV7 | 99.413 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
Gene ID | Type | Classification |
---|---|---|
Msa1140230 | TF | Trihelix |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004840 | Msa1140230 | 0.800949 | 1.133687e-48 | -8.615850e-47 |
Msa0005270 | Msa1140230 | 0.800457 | 1.428505e-48 | -8.615850e-47 |
Msa0007440 | Msa1140230 | 0.837936 | 3.873241e-57 | -8.615850e-47 |
Msa0010490 | Msa1140230 | 0.830464 | 2.893995e-55 | -8.615850e-47 |
Msa0010500 | Msa1140230 | 0.808771 | 2.629326e-50 | -8.615850e-47 |
Msa0015090 | Msa1140230 | 0.837734 | 4.363603e-57 | -8.615850e-47 |
Msa0020390 | Msa1140230 | 0.829218 | 5.822036e-55 | -8.615850e-47 |
Msa0032470 | Msa1140230 | 0.828347 | 9.455433e-55 | -8.615850e-47 |
Msa0038870 | Msa1140230 | 0.823561 | 1.296291e-53 | -8.615850e-47 |
Msa0043980 | Msa1140230 | 0.825628 | 4.226211e-54 | -8.615850e-47 |
Msa0049750 | Msa1140230 | 0.836665 | 8.191660e-57 | -8.615850e-47 |
Msa0051860 | Msa1140230 | 0.805045 | 1.613471e-49 | -8.615850e-47 |
Msa0056030 | Msa1140230 | 0.814178 | 1.758748e-51 | -8.615850e-47 |
Msa0062490 | Msa1140230 | 0.816096 | 6.594871e-52 | -8.615850e-47 |
Msa0071250 | Msa1140230 | 0.842582 | 2.367953e-58 | -8.615850e-47 |
Msa0082680 | Msa1140230 | -0.806310 | 8.754734e-50 | -8.615850e-47 |
Msa0086420 | Msa1140230 | 0.828782 | 7.425243e-55 | -8.615850e-47 |
Msa0089820 | Msa1140230 | 0.817737 | 2.823317e-52 | -8.615850e-47 |
Msa0090550 | Msa1140230 | 0.830094 | 3.563399e-55 | -8.615850e-47 |
Msa0095360 | Msa1140230 | 0.812254 | 4.649350e-51 | -8.615850e-47 |
Msa0095770 | Msa1140230 | 0.811679 | 6.205837e-51 | -8.615850e-47 |
Msa0096030 | Msa1140230 | 0.838018 | 3.689966e-57 | -8.615850e-47 |
Msa0096700 | Msa1140230 | 0.810285 | 1.243941e-50 | -8.615850e-47 |
Msa0096980 | Msa1140230 | 0.806691 | 7.273229e-50 | -8.615850e-47 |
Msa0098340 | Msa1140230 | 0.807879 | 4.074600e-50 | -8.615850e-47 |
Msa0098990 | Msa1140230 | 0.809019 | 2.327107e-50 | -8.615850e-47 |
Msa0103480 | Msa1140230 | 0.811640 | 6.328366e-51 | -8.615850e-47 |
Msa0104230 | Msa1140230 | 0.800477 | 1.415179e-48 | -8.615850e-47 |
Msa0104800 | Msa1140230 | 0.802382 | 5.761612e-49 | -8.615850e-47 |
Msa0109590 | Msa1140230 | 0.808623 | 2.827873e-50 | -8.615850e-47 |
Msa0111080 | Msa1140230 | 0.820294 | 7.400326e-53 | -8.615850e-47 |
Msa0115190 | Msa1140230 | 0.824867 | 6.395177e-54 | -8.615850e-47 |
Msa0118540 | Msa1140230 | 0.853852 | 1.816636e-61 | -8.615850e-47 |
Msa0604290 | Msa1140230 | 0.849295 | 3.543673e-60 | -8.615850e-47 |
Msa0610130 | Msa1140230 | 0.825980 | 3.486082e-54 | -8.615850e-47 |
Msa0610180 | Msa1140230 | 0.815248 | 1.018927e-51 | -8.615850e-47 |
Msa0621790 | Msa1140230 | 0.825515 | 4.493681e-54 | -8.615850e-47 |
Msa0624060 | Msa1140230 | 0.803655 | 3.143498e-49 | -8.615850e-47 |
Msa0629240 | Msa1140230 | 0.807746 | 4.347939e-50 | -8.615850e-47 |
Msa0631350 | Msa1140230 | 0.804802 | 1.813796e-49 | -8.615850e-47 |
Msa0640940 | Msa1140230 | 0.816549 | 5.221348e-52 | -8.615850e-47 |
Msa0643320 | Msa1140230 | 0.816248 | 6.097446e-52 | -8.615850e-47 |
Msa0654620 | Msa1140230 | 0.823089 | 1.671257e-53 | -8.615850e-47 |
Msa0657120 | Msa1140230 | 0.807408 | 5.129311e-50 | -8.615850e-47 |
Msa0672550 | Msa1140230 | 0.807385 | 5.186545e-50 | -8.615850e-47 |
Msa0679360 | Msa1140230 | 0.828623 | 8.111143e-55 | -8.615850e-47 |
Msa0682680 | Msa1140230 | 0.812266 | 4.622939e-51 | -8.615850e-47 |
Msa0683140 | Msa1140230 | 0.805196 | 1.500022e-49 | -8.615850e-47 |
Msa0683600 | Msa1140230 | 0.834429 | 3.012314e-56 | -8.615850e-47 |
Msa0685090 | Msa1140230 | 0.806714 | 7.193646e-50 | -8.615850e-47 |
Msa0689780 | Msa1140230 | 0.825955 | 3.533650e-54 | -8.615850e-47 |
Msa0698410 | Msa1140230 | 0.804371 | 2.230487e-49 | -8.615850e-47 |
Msa0701100 | Msa1140230 | 0.825529 | 4.460307e-54 | -8.615850e-47 |
Msa0703910 | Msa1140230 | 0.835948 | 1.246385e-56 | -8.615850e-47 |
Msa0705990 | Msa1140230 | 0.836210 | 1.069182e-56 | -8.615850e-47 |
Msa0732050 | Msa1140230 | 0.802777 | 4.776517e-49 | -8.615850e-47 |
Msa0741440 | Msa1140230 | 0.800959 | 1.128199e-48 | -8.615850e-47 |
Msa0742150 | Msa1140230 | 0.802530 | 5.370702e-49 | -8.615850e-47 |
Msa0746170 | Msa1140230 | 0.837060 | 6.492916e-57 | -8.615850e-47 |
Msa0746210 | Msa1140230 | 0.838849 | 2.252143e-57 | -8.615850e-47 |
Msa0748070 | Msa1140230 | 0.813095 | 3.044942e-51 | -8.615850e-47 |
Msa0748170 | Msa1140230 | 0.813585 | 2.375671e-51 | -8.615850e-47 |
Msa0749440 | Msa1140230 | 0.827185 | 1.799167e-54 | -8.615850e-47 |
Msa0750850 | Msa1140230 | 0.863368 | 2.617448e-64 | -8.615850e-47 |
Msa0751850 | Msa1140230 | 0.820995 | 5.106791e-53 | -8.615850e-47 |
Msa0763890 | Msa1140230 | 0.809054 | 2.286996e-50 | -8.615850e-47 |
Msa0763920 | Msa1140230 | 0.820387 | 7.045949e-53 | -8.615850e-47 |
Msa0767370 | Msa1140230 | 0.804904 | 1.726752e-49 | -8.615850e-47 |
Msa0788540 | Msa1140230 | 0.828485 | 8.756461e-55 | -8.615850e-47 |
Msa0793380 | Msa1140230 | 0.811917 | 5.507199e-51 | -8.615850e-47 |
Msa0795720 | Msa1140230 | 0.822946 | 1.803965e-53 | -8.615850e-47 |
Msa0801730 | Msa1140230 | 0.811992 | 5.303148e-51 | -8.615850e-47 |
Msa0822500 | Msa1140230 | 0.801832 | 7.474899e-49 | -8.615850e-47 |
Msa0831850 | Msa1140230 | 0.800391 | 1.473188e-48 | -8.615850e-47 |
Msa0832150 | Msa1140230 | 0.818775 | 1.643652e-52 | -8.615850e-47 |
Msa0833460 | Msa1140230 | 0.839334 | 1.686359e-57 | -8.615850e-47 |
Msa0130520 | Msa1140230 | 0.826525 | 2.586766e-54 | -8.615850e-47 |
Msa0135410 | Msa1140230 | 0.824175 | 9.305698e-54 | -8.615850e-47 |
Msa0138020 | Msa1140230 | 0.847966 | 8.272800e-60 | -8.615850e-47 |
Msa0142500 | Msa1140230 | 0.800868 | 1.177444e-48 | -8.615850e-47 |
Msa0145010 | Msa1140230 | 0.805133 | 1.546459e-49 | -8.615850e-47 |
Msa0152560 | Msa1140230 | 0.801563 | 8.489000e-49 | -8.615850e-47 |
Msa0154920 | Msa1140230 | 0.813772 | 2.160917e-51 | -8.615850e-47 |
Msa0155340 | Msa1140230 | 0.808817 | 2.570833e-50 | -8.615850e-47 |
Msa0160960 | Msa1140230 | 0.809388 | 1.939394e-50 | -8.615850e-47 |
Msa0167980 | Msa1140230 | 0.818636 | 1.767274e-52 | -8.615850e-47 |
Msa0170000 | Msa1140230 | 0.802314 | 5.951201e-49 | -8.615850e-47 |
Msa0175540 | Msa1140230 | 0.805773 | 1.135549e-49 | -8.615850e-47 |
Msa0180510 | Msa1140230 | -0.810341 | 1.209406e-50 | -8.615850e-47 |
Msa0183870 | Msa1140230 | 0.805414 | 1.350364e-49 | -8.615850e-47 |
Msa0187490 | Msa1140230 | 0.812901 | 3.358157e-51 | -8.615850e-47 |
Msa0189030 | Msa1140230 | 0.811572 | 6.547540e-51 | -8.615850e-47 |
Msa0189520 | Msa1140230 | 0.823731 | 1.183007e-53 | -8.615850e-47 |
Msa0190120 | Msa1140230 | 0.801289 | 9.658277e-49 | -8.615850e-47 |
Msa0196670 | Msa1140230 | 0.817566 | 3.086034e-52 | -8.615850e-47 |
Msa0197610 | Msa1140230 | 0.809843 | 1.548939e-50 | -8.615850e-47 |
Msa0204960 | Msa1140230 | 0.807364 | 5.241047e-50 | -8.615850e-47 |
Msa0206010 | Msa1140230 | 0.805978 | 1.027959e-49 | -8.615850e-47 |
Msa0207040 | Msa1140230 | -0.803058 | 4.178049e-49 | -8.615850e-47 |
Msa0217680 | Msa1140230 | 0.805549 | 1.265289e-49 | -8.615850e-47 |
Msa0233370 | Msa1140230 | 0.847600 | 1.043742e-59 | -8.615850e-47 |
Msa0236420 | Msa1140230 | 0.819323 | 1.233770e-52 | -8.615850e-47 |
Msa0366210 | Msa1140230 | 0.825341 | 4.941356e-54 | -8.615850e-47 |
Msa0376910 | Msa1140230 | 0.831986 | 1.222823e-55 | -8.615850e-47 |
Msa0380100 | Msa1140230 | 0.819547 | 1.096775e-52 | -8.615850e-47 |
Msa0385490 | Msa1140230 | 0.848948 | 4.427114e-60 | -8.615850e-47 |
Msa0385500 | Msa1140230 | 0.808059 | 3.730018e-50 | -8.615850e-47 |
Msa0388730 | Msa1140230 | 0.831816 | 1.347110e-55 | -8.615850e-47 |
Msa0389210 | Msa1140230 | 0.802194 | 6.299459e-49 | -8.615850e-47 |
Msa0394340 | Msa1140230 | 0.815178 | 1.056168e-51 | -8.615850e-47 |
Msa0401560 | Msa1140230 | 0.803556 | 3.295222e-49 | -8.615850e-47 |
Msa0403770 | Msa1140230 | 0.826297 | 2.931365e-54 | -8.615850e-47 |
Msa0408390 | Msa1140230 | 0.802461 | 5.550336e-49 | -8.615850e-47 |
Msa0427580 | Msa1140230 | 0.809009 | 2.338695e-50 | -8.615850e-47 |
Msa0432500 | Msa1140230 | 0.807297 | 5.414626e-50 | -8.615850e-47 |
Msa0442610 | Msa1140230 | 0.812771 | 3.585200e-51 | -8.615850e-47 |
Msa0457510 | Msa1140230 | 0.807130 | 5.875617e-50 | -8.615850e-47 |
Msa0471900 | Msa1140230 | 0.826644 | 2.422170e-54 | -8.615850e-47 |
Msa0472960 | Msa1140230 | -0.804265 | 2.346589e-49 | -8.615850e-47 |
Msa0481030 | Msa1140230 | 0.804187 | 2.436094e-49 | -8.615850e-47 |
Msa0481280 | Msa1140230 | 0.822411 | 2.403104e-53 | -8.615850e-47 |
Msa0980020 | Msa1140230 | 0.804316 | 2.290576e-49 | -8.615850e-47 |
Msa0992580 | Msa1140230 | 0.808114 | 3.630039e-50 | -8.615850e-47 |
Msa0992600 | Msa1140230 | 0.836754 | 7.772725e-57 | -8.615850e-47 |
Msa0994370 | Msa1140230 | 0.873331 | 1.597196e-67 | -8.615850e-47 |
Msa1013070 | Msa1140230 | 0.807578 | 4.720800e-50 | -8.615850e-47 |
Msa1018040 | Msa1140230 | 0.802502 | 5.441929e-49 | -8.615850e-47 |
Msa1023180 | Msa1140230 | 0.804749 | 1.860308e-49 | -8.615850e-47 |
Msa1023310 | Msa1140230 | 0.804865 | 1.759463e-49 | -8.615850e-47 |
Msa1024680 | Msa1140230 | 0.810952 | 8.925150e-51 | -8.615850e-47 |
Msa1025080 | Msa1140230 | 0.833757 | 4.438158e-56 | -8.615850e-47 |
Msa1029050 | Msa1140230 | 0.814101 | 1.828786e-51 | -8.615850e-47 |
Msa1029080 | Msa1140230 | -0.805530 | 1.276888e-49 | -8.615850e-47 |
Msa1034150 | Msa1140230 | 0.801976 | 6.984093e-49 | -8.615850e-47 |
Msa1034280 | Msa1140230 | 0.800259 | 1.567622e-48 | -8.615850e-47 |
Msa1037520 | Msa1140230 | 0.814015 | 1.910114e-51 | -8.615850e-47 |
Msa1042660 | Msa1140230 | 0.821233 | 4.500934e-53 | -8.615850e-47 |
Msa1043050 | Msa1140230 | 0.808143 | 3.578835e-50 | -8.615850e-47 |
Msa1051850 | Msa1140230 | 0.846120 | 2.650972e-59 | -8.615850e-47 |
Msa1062040 | Msa1140230 | 0.817841 | 2.675619e-52 | -8.615850e-47 |
Msa1063420 | Msa1140230 | 0.839415 | 1.606745e-57 | -8.615850e-47 |
Msa1071320 | Msa1140230 | 0.858871 | 6.115923e-63 | -8.615850e-47 |
Msa1072900 | Msa1140230 | 0.821053 | 4.952300e-53 | -8.615850e-47 |
Msa1077340 | Msa1140230 | 0.805305 | 1.423683e-49 | -8.615850e-47 |
Msa1081790 | Msa1140230 | -0.876478 | 1.352754e-68 | -8.615850e-47 |
Msa1087990 | Msa1140230 | 0.820081 | 8.280470e-53 | -8.615850e-47 |
Msa1089460 | Msa1140230 | 0.821208 | 4.561366e-53 | -8.615850e-47 |
Msa1096070 | Msa1140230 | 0.815708 | 8.049290e-52 | -8.615850e-47 |
Msa1096950 | Msa1140230 | 0.863671 | 2.107044e-64 | -8.615850e-47 |
Msa0241140 | Msa1140230 | 0.806360 | 8.543295e-50 | -8.615850e-47 |
Msa0244980 | Msa1140230 | 0.801052 | 1.079786e-48 | -8.615850e-47 |
Msa0256330 | Msa1140230 | 0.818035 | 2.418838e-52 | -8.615850e-47 |
Msa0257500 | Msa1140230 | 0.824050 | 9.958409e-54 | -8.615850e-47 |
Msa0262370 | Msa1140230 | 0.825032 | 5.846665e-54 | -8.615850e-47 |
Msa0270960 | Msa1140230 | 0.815973 | 7.026961e-52 | -8.615850e-47 |
Msa0271360 | Msa1140230 | 0.821732 | 3.453351e-53 | -8.615850e-47 |
Msa0271890 | Msa1140230 | 0.802870 | 4.569451e-49 | -8.615850e-47 |
Msa0272450 | Msa1140230 | 0.826207 | 3.078600e-54 | -8.615850e-47 |
Msa0274040 | Msa1140230 | -0.805466 | 1.317117e-49 | -8.615850e-47 |
Msa0278580 | Msa1140230 | 0.824077 | 9.812249e-54 | -8.615850e-47 |
Msa0285330 | Msa1140230 | 0.801594 | 8.364733e-49 | -8.615850e-47 |
Msa0295330 | Msa1140230 | 0.814825 | 1.264941e-51 | -8.615850e-47 |
Msa0296790 | Msa1140230 | 0.810081 | 1.376529e-50 | -8.615850e-47 |
Msa0299660 | Msa1140230 | 0.819018 | 1.447494e-52 | -8.615850e-47 |
Msa0300150 | Msa1140230 | 0.810244 | 1.269090e-50 | -8.615850e-47 |
Msa0305410 | Msa1140230 | 0.808540 | 2.945368e-50 | -8.615850e-47 |
Msa0309270 | Msa1140230 | 0.814349 | 1.611787e-51 | -8.615850e-47 |
Msa0309880 | Msa1140230 | 0.805702 | 1.175250e-49 | -8.615850e-47 |
Msa0310860 | Msa1140230 | 0.803134 | 4.028907e-49 | -8.615850e-47 |
Msa0311720 | Msa1140230 | 0.826122 | 3.226458e-54 | -8.615850e-47 |
Msa0317960 | Msa1140230 | 0.815242 | 1.022001e-51 | -8.615850e-47 |
Msa0321690 | Msa1140230 | 0.815556 | 8.703702e-52 | -8.615850e-47 |
Msa0326110 | Msa1140230 | 0.803356 | 3.624923e-49 | -8.615850e-47 |
Msa0335060 | Msa1140230 | 0.827928 | 1.193223e-54 | -8.615850e-47 |
Msa0337590 | Msa1140230 | 0.807457 | 5.007855e-50 | -8.615850e-47 |
Msa0339910 | Msa1140230 | 0.815308 | 9.883367e-52 | -8.615850e-47 |
Msa0347750 | Msa1140230 | 0.823815 | 1.130132e-53 | -8.615850e-47 |
Msa0358860 | Msa1140230 | 0.850480 | 1.652086e-60 | -8.615850e-47 |
Msa1107200 | Msa1140230 | 0.827315 | 1.674664e-54 | -8.615850e-47 |
Msa1109090 | Msa1140230 | 0.803328 | 3.673145e-49 | -8.615850e-47 |
Msa1111870 | Msa1140230 | 0.802731 | 4.881153e-49 | -8.615850e-47 |
Msa1115280 | Msa1140230 | 0.802142 | 6.454689e-49 | -8.615850e-47 |
Msa1130400 | Msa1140230 | 0.807245 | 5.552789e-50 | -8.615850e-47 |
Msa1133230 | Msa1140230 | 0.820765 | 5.769988e-53 | -8.615850e-47 |
Msa1133250 | Msa1140230 | 0.813799 | 2.132122e-51 | -8.615850e-47 |
Msa1140230 | Msa1144040 | 0.822155 | 2.754947e-53 | -8.615850e-47 |
Msa1140230 | Msa1150710 | 0.813766 | 2.167829e-51 | -8.615850e-47 |
Msa1140230 | Msa1150790 | 0.806699 | 7.247511e-50 | -8.615850e-47 |
Msa1140230 | Msa1156170 | -0.803980 | 2.691057e-49 | -8.615850e-47 |
Msa1140230 | Msa1166090 | -0.876290 | 1.570285e-68 | -8.615850e-47 |
Msa1140230 | Msa1169850 | -0.812464 | 4.185354e-51 | -8.615850e-47 |
Msa1140230 | Msa1176720 | 0.820958 | 5.210495e-53 | -8.615850e-47 |
Msa1140230 | Msa1180500 | 0.800739 | 1.251388e-48 | -8.615850e-47 |
Msa1140230 | Msa1188600 | -0.807164 | 5.778999e-50 | -8.615850e-47 |
Msa1140230 | Msa1205590 | 0.804480 | 2.117502e-49 | -8.615850e-47 |
Msa1140230 | Msa1206270 | 0.809024 | 2.321335e-50 | -8.615850e-47 |
Msa1140230 | Msa1206310 | 0.810486 | 1.125529e-50 | -8.615850e-47 |
Msa1140230 | Msa1206360 | 0.823299 | 1.492548e-53 | -8.615850e-47 |
Msa1140230 | Msa1207310 | 0.856927 | 2.310833e-62 | -8.615850e-47 |
Msa1140230 | Msa1207350 | 0.830873 | 2.297358e-55 | -8.615850e-47 |
Msa1140230 | Msa1208380 | 0.856235 | 3.689669e-62 | -8.615850e-47 |
Msa1140230 | Msa1217470 | 0.800061 | 1.719492e-48 | -8.615850e-47 |
Msa1140230 | Msa1218580 | 0.838282 | 3.154860e-57 | -8.615850e-47 |
Msa1140230 | Msa1221330 | 0.806430 | 8.256221e-50 | -8.615850e-47 |
Msa1140230 | Msa1231840 | 0.825654 | 4.165629e-54 | -8.615850e-47 |
Msa1140230 | Msa1242580 | -0.806055 | 9.904077e-50 | -8.615850e-47 |
Msa1140230 | Msa1250110 | 0.802149 | 6.433364e-49 | -8.615850e-47 |
Msa1140230 | Msa1270660 | 0.845496 | 3.916527e-59 | -8.615850e-47 |
Msa1140230 | Msa1270730 | 0.849782 | 2.592932e-60 | -8.615850e-47 |
Msa1140230 | Msa1274560 | 0.811854 | 5.684630e-51 | -8.615850e-47 |
Msa1140230 | Msa1280320 | 0.804638 | 1.962335e-49 | -8.615850e-47 |
Msa1140230 | Msa1280340 | 0.821635 | 3.635796e-53 | -8.615850e-47 |
Msa1140230 | Msa1295330 | 0.821863 | 3.219695e-53 | -8.615850e-47 |
Msa1140230 | Msa1307180 | 0.838504 | 2.765433e-57 | -8.615850e-47 |
Msa1140230 | Msa1312520 | 0.800479 | 1.413507e-48 | -8.615850e-47 |
Msa1140230 | Msa1316360 | 0.853857 | 1.810579e-61 | -8.615850e-47 |
Msa1140230 | Msa1331320 | 0.818985 | 1.472527e-52 | -8.615850e-47 |
Msa1140230 | Msa1331350 | 0.815251 | 1.017425e-51 | -8.615850e-47 |
Msa1140230 | Msa1332050 | 0.812003 | 5.273945e-51 | -8.615850e-47 |
Msa1140230 | Msa1335230 | 0.840087 | 1.073580e-57 | -8.615850e-47 |
Msa1140230 | Msa1337170 | 0.813313 | 2.726287e-51 | -8.615850e-47 |
Msa1140230 | Msa1339190 | 0.813207 | 2.877219e-51 | -8.615850e-47 |
Msa1140230 | Msa1342100 | 0.800320 | 1.523257e-48 | -8.615850e-47 |
Msa1140230 | Msa1346840 | 0.820141 | 8.020976e-53 | -8.615850e-47 |
Msa1140230 | Msa1355890 | 0.853817 | 1.859832e-61 | -8.615850e-47 |
Msa1140230 | Msa1357430 | 0.800814 | 1.207724e-48 | -8.615850e-47 |
Msa1140230 | Msa1364210 | 0.800511 | 1.392777e-48 | -8.615850e-47 |
Msa1140230 | Msa1370590 | 0.821775 | 3.374563e-53 | -8.615850e-47 |
Msa1140230 | Msa1371940 | 0.821779 | 3.367778e-53 | -8.615850e-47 |
Msa1140230 | Msa1378410 | 0.800769 | 1.233738e-48 | -8.615850e-47 |
Msa1140230 | Msa1382020 | 0.814658 | 1.377134e-51 | -8.615850e-47 |
Msa1140230 | Msa1384100 | 0.822562 | 2.216407e-53 | -8.615850e-47 |
Msa1140230 | Msa1386050 | 0.802468 | 5.530468e-49 | -8.615850e-47 |
Msa1140230 | Msa1388860 | 0.838324 | 3.077626e-57 | -8.615850e-47 |
Msa1140230 | Msa1396400 | -0.874436 | 6.762991e-68 | -8.615850e-47 |
Msa1140230 | Msa1401990 | 0.815863 | 7.433918e-52 | -8.615850e-47 |
Msa1140230 | Msa1407190 | 0.801731 | 7.840915e-49 | -8.615850e-47 |
Msa1140230 | Msa1412130 | 0.804999 | 1.649151e-49 | -8.615850e-47 |
Msa1140230 | Msa1419000 | 0.806407 | 8.352210e-50 | -8.615850e-47 |
Msa1140230 | Msa1420270 | 0.828333 | 9.529263e-55 | -8.615850e-47 |
Msa1140230 | Msa1422810 | 0.821349 | 4.233200e-53 | -8.615850e-47 |
Msa1140230 | Msa1423820 | 0.830533 | 2.783345e-55 | -8.615850e-47 |
Msa1140230 | Msa1428780 | 0.835844 | 1.324419e-56 | -8.615850e-47 |
Msa1140230 | Msa1430130 | 0.826943 | 2.054904e-54 | -8.615850e-47 |
Msa1140230 | Msa1436520 | 0.809424 | 1.904954e-50 | -8.615850e-47 |
Msa1140230 | Msa1436600 | 0.837219 | 5.915017e-57 | -8.615850e-47 |
Msa1140230 | Msa1437730 | 0.828257 | 9.939098e-55 | -8.615850e-47 |
Msa1140230 | Msa1437910 | 0.814792 | 1.285933e-51 | -8.615850e-47 |
Msa1140230 | Msa1438840 | 0.842809 | 2.061328e-58 | -8.615850e-47 |
Msa1140230 | Msa1442790 | 0.823999 | 1.023321e-53 | -8.615850e-47 |
Msa1140230 | Msa1444120 | 0.816750 | 4.708665e-52 | -8.615850e-47 |
Msa1140230 | Msa1444740 | 0.804631 | 1.969240e-49 | -8.615850e-47 |
Msa1140230 | Msa1446080 | 0.819133 | 1.363145e-52 | -8.615850e-47 |
Msa1140230 | Msa1447890 | 0.812674 | 3.764777e-51 | -8.615850e-47 |
Msa1140230 | Msa1448630 | 0.805034 | 1.622173e-49 | -8.615850e-47 |
Msa1140230 | Msa1458090 | 0.802340 | 5.877980e-49 | -8.615850e-47 |
Msa1140230 | Msa1458290 | 0.808166 | 3.539261e-50 | -8.615850e-47 |
Msa1140230 | Msa1460750 | 0.827045 | 1.943326e-54 | -8.615850e-47 |
Msa1140230 | Msa1465610 | -0.805836 | 1.101275e-49 | -8.615850e-47 |
Msa0482940 | Msa1140230 | 0.821307 | 4.329676e-53 | -8.615850e-47 |
Msa0485490 | Msa1140230 | 0.831139 | 1.976643e-55 | -8.615850e-47 |
Msa0489610 | Msa1140230 | 0.808879 | 2.493075e-50 | -8.615850e-47 |
Msa0496450 | Msa1140230 | 0.806758 | 7.039773e-50 | -8.615850e-47 |
Msa0518170 | Msa1140230 | 0.821614 | 3.677024e-53 | -8.615850e-47 |
Msa0524600 | Msa1140230 | 0.812509 | 4.090934e-51 | -8.615850e-47 |
Msa0534900 | Msa1140230 | 0.813544 | 2.425725e-51 | -8.615850e-47 |
Msa0542290 | Msa1140230 | 0.816880 | 4.402734e-52 | -8.615850e-47 |
Msa0542560 | Msa1140230 | 0.863520 | 2.347686e-64 | -8.615850e-47 |
Msa0544840 | Msa1140230 | 0.826222 | 3.053212e-54 | -8.615850e-47 |
Msa0549780 | Msa1140230 | 0.834617 | 2.702008e-56 | -8.615850e-47 |
Msa0566350 | Msa1140230 | 0.827406 | 1.592055e-54 | -8.615850e-47 |
Msa0566750 | Msa1140230 | 0.824052 | 9.944862e-54 | -8.615850e-47 |
Msa0580530 | Msa1140230 | 0.805593 | 1.238627e-49 | -8.615850e-47 |
Msa0588240 | Msa1140230 | 0.802528 | 5.374900e-49 | -8.615850e-47 |
Msa0588260 | Msa1140230 | 0.808453 | 3.073890e-50 | -8.615850e-47 |
Msa0600080 | Msa1140230 | 0.839643 | 1.401827e-57 | -8.615850e-47 |
Msa0600450 | Msa1140230 | 0.816222 | 6.181035e-52 | -8.615850e-47 |
Msa0602370 | Msa1140230 | 0.804850 | 1.772305e-49 | -8.615850e-47 |
Msa0844110 | Msa1140230 | 0.828974 | 6.669046e-55 | -8.615850e-47 |
Msa0861470 | Msa1140230 | 0.855559 | 5.817521e-62 | -8.615850e-47 |
Msa0861570 | Msa1140230 | 0.855049 | 8.188675e-62 | -8.615850e-47 |
Msa0877710 | Msa1140230 | 0.817086 | 3.957321e-52 | -8.615850e-47 |
Msa0880810 | Msa1140230 | 0.842043 | 3.290392e-58 | -8.615850e-47 |
Msa0887250 | Msa1140230 | 0.824383 | 8.316665e-54 | -8.615850e-47 |
Msa0888260 | Msa1140230 | 0.817526 | 3.150509e-52 | -8.615850e-47 |
Msa0890550 | Msa1140230 | 0.809129 | 2.203641e-50 | -8.615850e-47 |
Msa0894710 | Msa1140230 | 0.819987 | 8.701518e-53 | -8.615850e-47 |
Msa0914610 | Msa1140230 | 0.801716 | 7.894682e-49 | -8.615850e-47 |
Msa0918390 | Msa1140230 | 0.816657 | 4.939111e-52 | -8.615850e-47 |
Msa0921420 | Msa1140230 | 0.801311 | 9.560494e-49 | -8.615850e-47 |
Msa0944200 | Msa1140230 | 0.805470 | 1.314717e-49 | -8.615850e-47 |
Msa0958920 | Msa1140230 | 0.827264 | 1.722138e-54 | -8.615850e-47 |
Msa0960390 | Msa1140230 | 0.804763 | 1.847748e-49 | -8.615850e-47 |
Msa0969370 | Msa1140230 | 0.801084 | 1.063899e-48 | -8.615850e-47 |
Msa0974950 | Msa1140230 | 0.800162 | 1.640258e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1140230 | MtrunA17_Chr7g0221451 | 99.123 | 342 | 2 | 1 | 1 | 341 | 1 | 342 | 0.0 | 692 |
Msa1140230 | MtrunA17_Chr1g0211061 | 67.147 | 347 | 77 | 9 | 1 | 341 | 1 | 316 | 5.38e-139 | 397 |
Msa1140230 | MtrunA17_Chr8g0385751 | 36.232 | 345 | 155 | 12 | 36 | 341 | 43 | 361 | 7.73e-56 | 186 |
Msa1140230 | MtrunA17_Chr1g0199044 | 29.730 | 148 | 64 | 5 | 41 | 148 | 56 | 203 | 9.79e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1140230 | AT2G33550.1 | 48.295 | 352 | 133 | 9 | 1 | 341 | 1 | 314 | 4.68e-96 | 288 |
Msa1140230 | AT4G31270.1 | 33.913 | 115 | 70 | 1 | 39 | 153 | 17 | 125 | 8.38e-17 | 80.1 |
Msa1140230 | AT2G35640.1 | 34.711 | 121 | 62 | 5 | 41 | 148 | 22 | 138 | 2.53e-12 | 67.4 |
Find 138 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTAATTTCATTCACTTTA+TGG | 0.011354 | 7_4:-11608430 | Msa1140230:exon |
TGAGATGTAGAGCCCGTTTC+TGG | 0.174990 | 7_4:+11604974 | None:intergenic |
CCTTCACCTGTTCCTATATC+AGG | 0.202031 | 7_4:-11607757 | Msa1140230:intron |
CGGAGGCACCGTCACAAAAT+AGG | 0.204861 | 7_4:-11608491 | Msa1140230:five_prime_UTR |
ACAGTTCCATCATCGGAATT+AGG | 0.210777 | 7_4:+11608390 | None:intergenic |
TAAACTGTTACTGCCATTAT+AGG | 0.215864 | 7_4:-11604608 | Msa1140230:three_prime_UTR |
GCCATAAAGTGAATGAAATT+AGG | 0.217948 | 7_4:+11608429 | None:intergenic |
TTGGACTAGGCAGGAGATTT+TGG | 0.244674 | 7_4:-11608292 | Msa1140230:CDS |
AAACCGGGTCGGAATGGGTC+TGG | 0.265216 | 7_4:-11608231 | Msa1140230:CDS |
GATAAAGGAGTGGGAGAGTC+AGG | 0.272993 | 7_4:-11608088 | Msa1140230:CDS |
CAGTTCCATCATCGGAATTA+GGG | 0.288650 | 7_4:+11608391 | None:intergenic |
TTCATATTTATGATAGTAAT+AGG | 0.301580 | 7_4:-11607858 | Msa1140230:CDS |
GGCTGGTTGTTTCTCATTGT+TGG | 0.301660 | 7_4:+11605003 | None:intergenic |
TTTCATTCACTTTATGGCTT+TGG | 0.307015 | 7_4:-11608424 | Msa1140230:exon |
CCATAAAGTGAATGAAATTA+GGG | 0.326616 | 7_4:+11608430 | None:intergenic |
GGTCGGAATGGGTCTGGGTT+TGG | 0.340314 | 7_4:-11608225 | Msa1140230:CDS |
CTCTTCATTGCCGTCTCCAT+TGG | 0.349024 | 7_4:+11604922 | None:intergenic |
TTCCTTCTCCTTGGCAGCCT+CGG | 0.354622 | 7_4:+11607006 | None:intergenic |
CAAAATAACCAACCTGATAT+AGG | 0.358309 | 7_4:+11607745 | None:intergenic |
AAGGAGATTAATAGAGAAAA+GGG | 0.361069 | 7_4:+11608590 | None:intergenic |
TGCTGAAAGCCGGTTTAAAC+CGG | 0.361320 | 7_4:-11608247 | Msa1140230:CDS |
GGCAGCATCGGTTGTTGTTC+CGG | 0.362479 | 7_4:-11607929 | Msa1140230:CDS |
TCCATCCTCGCCACCGTTCA+CGG | 0.362719 | 7_4:+11608338 | None:intergenic |
TCTTTCTAAAACGCCGTTAA+CGG | 0.366762 | 7_4:-11608511 | Msa1140230:five_prime_UTR |
TGTGACGGTGCCTCCGTTAA+CGG | 0.374926 | 7_4:+11608498 | None:intergenic |
GAAGGAGATTAATAGAGAAA+AGG | 0.377518 | 7_4:+11608589 | None:intergenic |
TCCGATGATGGAACTGTTAA+CGG | 0.379041 | 7_4:-11608384 | Msa1140230:CDS |
GGCTGCAGCTGTGGCAGCAT+CGG | 0.381376 | 7_4:-11607941 | Msa1140230:CDS |
GAAGAAACCAACGCCCATTT+CGG | 0.382737 | 7_4:+11608192 | None:intergenic |
GAGATGAAACGGAGTCGTTT+TGG | 0.385379 | 7_4:-11608062 | Msa1140230:CDS |
TTGCAGTTTCATTCTGCTGC+TGG | 0.394241 | 7_4:+11604798 | None:intergenic |
CTAGGACTATATACAACCTT+TGG | 0.395087 | 7_4:-11604584 | Msa1140230:three_prime_UTR |
AACCGGGTCGGAATGGGTCT+GGG | 0.399338 | 7_4:-11608230 | Msa1140230:CDS |
CCCGTTTCTGGATTCGAGGC+TGG | 0.399420 | 7_4:+11604986 | None:intergenic |
GTAAGAAACACGGTGTGAAC+CGG | 0.402207 | 7_4:-11608164 | Msa1140230:CDS |
TAGTCAATTAATTGATGTAT+TGG | 0.403614 | 7_4:-11604885 | Msa1140230:CDS |
TTGGTTCGAGTGAACCGAAA+TGG | 0.407548 | 7_4:-11608206 | Msa1140230:CDS |
GTTTAATAATACTAAAAGTA+AGG | 0.413373 | 7_4:+11604626 | None:intergenic |
CCATCATCGGAATTAGGGTT+TGG | 0.414944 | 7_4:+11608396 | None:intergenic |
CATTCCGACCCGGTTTAAAC+CGG | 0.422032 | 7_4:+11608238 | None:intergenic |
CGGAGATTATAAGAAGATAA+AGG | 0.430532 | 7_4:-11608103 | Msa1140230:CDS |
ATATAGTCCTAGTCCTATAA+TGG | 0.431571 | 7_4:+11604595 | None:intergenic |
CTTGAGCATTTCCTTCTCCT+TGG | 0.433995 | 7_4:+11606997 | None:intergenic |
CTTTATCTTCTTATAATCTC+CGG | 0.440339 | 7_4:+11608104 | None:intergenic |
GTAATAGTGTACATACCATT+TGG | 0.445594 | 7_4:-11604694 | Msa1140230:three_prime_UTR |
GGAGGCACCGTCACAAAATA+GGG | 0.446436 | 7_4:-11608490 | Msa1140230:five_prime_UTR |
GATAAGCTTGCAAATGCTCT+TGG | 0.446812 | 7_4:-11604755 | Msa1140230:CDS |
GCCGTCGATGGCGGTGGCAG+CGG | 0.449844 | 7_4:-11607962 | Msa1140230:CDS |
CGGTTTAAACCGGGTCGGAA+TGG | 0.460221 | 7_4:-11608237 | Msa1140230:CDS |
AGAGACGGTTGGAGGGGATG+AGG | 0.467759 | 7_4:-11607884 | Msa1140230:CDS |
AGGAAAGTGAGTGGTGAGGA+TGG | 0.468097 | 7_4:-11607838 | Msa1140230:CDS |
CATCTCAAGGGGAACGTAAG+AGG | 0.469277 | 7_4:-11604958 | Msa1140230:CDS |
GGTTTAAACCGGGTCGGAAT+GGG | 0.469821 | 7_4:-11608236 | Msa1140230:CDS |
GTCCGTGTCGGTTTCAGAGA+CGG | 0.474170 | 7_4:-11607899 | Msa1140230:CDS |
GCCGCTGCCACCGCCATCGA+CGG | 0.475194 | 7_4:+11607961 | None:intergenic |
CCAAACCCTAATTCCGATGA+TGG | 0.478565 | 7_4:-11608396 | Msa1140230:CDS |
TGGTTCGAGTGAACCGAAAT+GGG | 0.480374 | 7_4:-11608205 | Msa1140230:CDS |
AACCAACCTGATATAGGAAC+AGG | 0.482028 | 7_4:+11607751 | None:intergenic |
ACCAGCCTCGAATCCAGAAA+CGG | 0.487810 | 7_4:-11604987 | Msa1140230:CDS |
CACCGCTTCCTACACTGAAT+CGG | 0.488900 | 7_4:+11608138 | None:intergenic |
CCACTACTGATGACTCCAAA+TGG | 0.490195 | 7_4:+11604679 | None:intergenic |
GCCGTGAACGGTGGCGAGGA+TGG | 0.493423 | 7_4:-11608339 | Msa1140230:CDS |
GGTGGCAGCGGCTGCAGCTG+TGG | 0.495633 | 7_4:-11607950 | Msa1140230:CDS |
CTCGCCACCGTTCACGGCGG+AGG | 0.497849 | 7_4:+11608344 | None:intergenic |
ACCGACACGGACACATTCAC+CGG | 0.507822 | 7_4:+11607910 | None:intergenic |
TAGGACTATATACAACCTTT+GGG | 0.508090 | 7_4:-11604583 | Msa1140230:three_prime_UTR |
CGAGGCTGCCACGTTGGACT+AGG | 0.508267 | 7_4:-11608305 | Msa1140230:CDS |
GGAATGATTTGAGGAGAGAG+AGG | 0.508729 | 7_4:-11608032 | Msa1140230:CDS |
GAGTCAGGTGAGAGATGAAA+CGG | 0.509162 | 7_4:-11608073 | Msa1140230:CDS |
CCACTCCTCCGAGGCTGCCA+AGG | 0.511072 | 7_4:-11607014 | Msa1140230:CDS |
GGTTGATGAGGAATGATTTG+AGG | 0.515241 | 7_4:-11608041 | Msa1140230:CDS |
CCAGCCTCGAATCCAGAAAC+GGG | 0.515344 | 7_4:-11604986 | Msa1140230:CDS |
TCGGTTTCAGAGACGGTTGG+AGG | 0.516269 | 7_4:-11607892 | Msa1140230:CDS |
TAAGAAACACGGTGTGAACC+GGG | 0.516907 | 7_4:-11608163 | Msa1140230:CDS |
CTCCGAGGCTGCCAAGGAGA+AGG | 0.523413 | 7_4:-11607008 | Msa1140230:CDS |
TGATTCGCCGTCGATGGCGG+TGG | 0.527873 | 7_4:-11607968 | Msa1140230:CDS |
AGGAGAGAGAGGAAATTGCC+TGG | 0.529803 | 7_4:-11608021 | Msa1140230:CDS |
AGAGCCCGTTTCTGGATTCG+AGG | 0.531658 | 7_4:+11604982 | None:intergenic |
ACCGTTAACAGTTCCATCAT+CGG | 0.535210 | 7_4:+11608383 | None:intergenic |
GATACTTGATTCGCCGTCGA+TGG | 0.535395 | 7_4:-11607974 | Msa1140230:CDS |
TTATAAGAAGATAAAGGAGT+GGG | 0.535976 | 7_4:-11608097 | Msa1140230:CDS |
GAAACGGGCTCTACATCTCA+AGG | 0.544821 | 7_4:-11604971 | Msa1140230:CDS |
CGGTTTCAGAGACGGTTGGA+GGG | 0.546057 | 7_4:-11607891 | Msa1140230:CDS |
CCACCGTTCACGGCGGAGGA+CGG | 0.551882 | 7_4:+11608348 | None:intergenic |
CTTCTCCTTGGCAGCCTCGG+AGG | 0.552038 | 7_4:+11607009 | None:intergenic |
ATTATAAGAAGATAAAGGAG+TGG | 0.554162 | 7_4:-11608098 | Msa1140230:CDS |
AAGGGGAACGTAAGAGGAAG+CGG | 0.555390 | 7_4:-11604952 | Msa1140230:CDS |
GAAAGAGTGATGCTGAAAGC+CGG | 0.563160 | 7_4:-11608257 | Msa1140230:CDS |
CCGTCCTCCGCCGTGAACGG+TGG | 0.563465 | 7_4:-11608348 | Msa1140230:CDS |
AACCCAGACCCATTCCGACC+CGG | 0.563556 | 7_4:+11608228 | None:intergenic |
TTTAATAATACTAAAAGTAA+GGG | 0.564510 | 7_4:+11604627 | None:intergenic |
CCATTTGGAGTCATCAGTAG+TGG | 0.565402 | 7_4:-11604679 | Msa1140230:three_prime_UTR |
TCCTACACTGAATCGGACCC+CGG | 0.566040 | 7_4:+11608145 | None:intergenic |
AGGAAGCGGTTCGCAACCAA+TGG | 0.566583 | 7_4:-11604938 | Msa1140230:CDS |
TTCTAAAACGCCGTTAACGG+AGG | 0.566780 | 7_4:-11608508 | Msa1140230:five_prime_UTR |
GACGGTTGGAGGGGATGAGG+AGG | 0.568399 | 7_4:-11607881 | Msa1140230:CDS |
CCACCGTCCTCCGCCGTGAA+CGG | 0.574662 | 7_4:-11608351 | Msa1140230:CDS |
GGTTTCAGAGACGGTTGGAG+GGG | 0.575314 | 7_4:-11607890 | Msa1140230:CDS |
CAACGGCGAGGCTGCCACGT+TGG | 0.578495 | 7_4:-11608311 | Msa1140230:CDS |
CGATTCAGTGTAGGAAGCGG+TGG | 0.579523 | 7_4:-11608137 | Msa1140230:CDS |
GAGTGAACCGAAATGGGCGT+TGG | 0.586856 | 7_4:-11608199 | Msa1140230:CDS |
CTCCGCCGTGAACGGTGGCG+AGG | 0.588326 | 7_4:-11608343 | Msa1140230:CDS |
GTGTCGGTTTCAGAGACGGT+TGG | 0.589727 | 7_4:-11607895 | Msa1140230:CDS |
GTCCGATTCAGTGTAGGAAG+CGG | 0.593847 | 7_4:-11608140 | Msa1140230:CDS |
GCTGAAAGCCGGTTTAAACC+GGG | 0.593885 | 7_4:-11608246 | Msa1140230:CDS |
TGATAAGCTGTAGTGCAAGA+AGG | 0.594772 | 7_4:-11604723 | Msa1140230:exon |
AAGCGGTGGAGCAACCTCGC+CGG | 0.597218 | 7_4:-11608123 | Msa1140230:CDS |
TCCGGTGAATGTGTCCGTGT+CGG | 0.602281 | 7_4:-11607911 | Msa1140230:CDS |
CAATGGAGACGGCAATGAAG+AGG | 0.604269 | 7_4:-11604921 | Msa1140230:CDS |
GGAAAGTGAGTGGTGAGGAT+GGG | 0.605368 | 7_4:-11607837 | Msa1140230:CDS |
GTTACTGCCATTATAGGACT+AGG | 0.607869 | 7_4:-11604602 | Msa1140230:three_prime_UTR |
TAATAGGAAAGTGAGTGGTG+AGG | 0.611943 | 7_4:-11607842 | Msa1140230:CDS |
GGAGAGAGAGGAAATTGCCT+GGG | 0.612198 | 7_4:-11608020 | Msa1140230:CDS |
ACTTGATTCGCCGTCGATGG+CGG | 0.613112 | 7_4:-11607971 | Msa1140230:CDS |
CGGTTCGCAACCAATGGAGA+CGG | 0.613454 | 7_4:-11604932 | Msa1140230:CDS |
CCGTTCACGGCGGAGGACGG+TGG | 0.619410 | 7_4:+11608351 | None:intergenic |
AAACGGGCTCTACATCTCAA+GGG | 0.623139 | 7_4:-11604970 | Msa1140230:CDS |
CAAGGAGAAGGAAATGCTCA+AGG | 0.623679 | 7_4:-11606996 | Msa1140230:intron |
CATTTGGAGTCATCAGTAGT+GGG | 0.625979 | 7_4:-11604678 | Msa1140230:three_prime_UTR |
GATGCTAAGTGAACAACTAG+AGG | 0.629368 | 7_4:-11604849 | Msa1140230:CDS |
GATGGAACTGTTAACGGTAA+CGG | 0.629880 | 7_4:-11608378 | Msa1140230:CDS |
AACCGTCTCTGAAACCGACA+CGG | 0.638183 | 7_4:+11607897 | None:intergenic |
CCTGATATAGGAACAGGTGA+AGG | 0.639915 | 7_4:+11607757 | None:intergenic |
AACGGGCTCTACATCTCAAG+GGG | 0.641332 | 7_4:-11604969 | Msa1140230:CDS |
ATAAATGCAGTAACTCCCAA+AGG | 0.641377 | 7_4:+11604568 | None:intergenic |
TGGAGACGGCAATGAAGAGG+AGG | 0.641529 | 7_4:-11604918 | Msa1140230:CDS |
TCTTCGTATTGTAAGAAACA+CGG | 0.643626 | 7_4:-11608174 | Msa1140230:CDS |
GATAGTAATAGGAAAGTGAG+TGG | 0.654357 | 7_4:-11607847 | Msa1140230:CDS |
ACCTCCTTATCAAAATACCC+AGG | 0.654771 | 7_4:+11608003 | None:intergenic |
TGGCGAGGATGGAAAACCAA+CGG | 0.670801 | 7_4:-11608328 | Msa1140230:CDS |
TCTTCTTATAATCTCCGGCG+AGG | 0.675112 | 7_4:+11608109 | None:intergenic |
ACCGGGGTCCGATTCAGTGT+AGG | 0.687179 | 7_4:-11608146 | Msa1140230:CDS |
AAGAAACACGGTGTGAACCG+GGG | 0.696776 | 7_4:-11608162 | Msa1140230:CDS |
AAAGCCGGTTTAAACCGGGT+CGG | 0.699962 | 7_4:-11608242 | Msa1140230:CDS |
AGGATGGAAAACCAACGGCG+AGG | 0.725001 | 7_4:-11608323 | Msa1140230:CDS |
ATCTCCTGCCTAGTCCAACG+TGG | 0.727740 | 7_4:+11608297 | None:intergenic |
CAGTTTCTACCACTCCTCCG+AGG | 0.732051 | 7_4:-11607023 | Msa1140230:CDS |
ATCCTCGCCACCGTTCACGG+CGG | 0.733386 | 7_4:+11608341 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATATATATTTTTTTATGTT+AGG | - | chr7_4:11606682-11606701 | Msa1140230:intron | 10.0% |
!! | TTTAATAATACTAAAAGTAA+GGG | + | chr7_4:11608552-11608571 | None:intergenic | 10.0% |
!! | AGAATGAAAAAGAAAAAAAA+GGG | + | chr7_4:11604648-11604667 | None:intergenic | 15.0% |
!! | AAGAATGAAAAAGAAAAAAA+AGG | + | chr7_4:11604649-11604668 | None:intergenic | 15.0% |
!! | TTCATATTTATGATAGTAAT+AGG | - | chr7_4:11605318-11605337 | Msa1140230:intron | 15.0% |
!!! | TTTTAGATTGAAATTGTTTT+CGG | - | chr7_4:11605532-11605551 | Msa1140230:intron | 15.0% |
!! | ATTTAAATAATTACAGCTAT+TGG | - | chr7_4:11605644-11605663 | Msa1140230:intron | 15.0% |
!! | TTTAAATAATTACAGCTATT+GGG | - | chr7_4:11605645-11605664 | Msa1140230:intron | 15.0% |
!! | TATATAATAGTGTTAATTAC+AGG | - | chr7_4:11605855-11605874 | Msa1140230:intron | 15.0% |
!! | GATTTCAATCATTAAATTTA+TGG | + | chr7_4:11606552-11606571 | None:intergenic | 15.0% |
!! | AAATTTAATGATTGAAATCA+TGG | - | chr7_4:11606553-11606572 | Msa1140230:intron | 15.0% |
!! | GAATTAACAAAATTTCAAAA+TGG | - | chr7_4:11607525-11607544 | Msa1140230:intron | 15.0% |
!! | GTTTAATAATACTAAAAGTA+AGG | + | chr7_4:11608553-11608572 | None:intergenic | 15.0% |
!!! | TTTTTTCTTCTTAAGAATGA+AGG | + | chr7_4:11604608-11604627 | None:intergenic | 20.0% |
!! | ATAAGCTTATACAATCAAAA+AGG | + | chr7_4:11605476-11605495 | None:intergenic | 20.0% |
!!! | TTTAGATTGAAATTGTTTTC+GGG | - | chr7_4:11605533-11605552 | Msa1140230:intron | 20.0% |
!! | TTAAATAATTACAGCTATTG+GGG | - | chr7_4:11605646-11605665 | Msa1140230:intron | 20.0% |
!!! | CATTTTTTTTGAATAATCAC+AGG | - | chr7_4:11605738-11605757 | Msa1140230:intron | 20.0% |
!! | AATAAAAAAACAGTACAGTA+TGG | + | chr7_4:11605993-11606012 | None:intergenic | 20.0% |
!!! | AGTGTTTTATGTTTTAAAGT+TGG | - | chr7_4:11606028-11606047 | Msa1140230:intron | 20.0% |
!!! | TTTTATGTTTTAAAGTTGGA+GGG | - | chr7_4:11606032-11606051 | Msa1140230:intron | 20.0% |
!!! | GTTTTAATACTAGAATGATA+TGG | - | chr7_4:11606251-11606270 | Msa1140230:intron | 20.0% |
!! | GATAAATATATGATTTACCA+CGG | + | chr7_4:11606777-11606796 | None:intergenic | 20.0% |
!! | AACAAACATAAAACAAATGA+TGG | + | chr7_4:11607065-11607084 | None:intergenic | 20.0% |
!!! | TTTTTCTGATATTGCATTTT+TGG | - | chr7_4:11607181-11607200 | Msa1140230:intron | 20.0% |
!!! | TTTTCTGATATTGCATTTTT+GGG | - | chr7_4:11607182-11607201 | Msa1140230:intron | 20.0% |
!! | AATTTCAGAAACGAAATTAA+CGG | + | chr7_4:11607576-11607595 | None:intergenic | 20.0% |
!!! | ATATTATCACTTTTCATGAA+TGG | - | chr7_4:11607947-11607966 | Msa1140230:CDS | 20.0% |
!!! | ATACATTCCTTTACTTTTAT+AGG | - | chr7_4:11608148-11608167 | Msa1140230:CDS | 20.0% |
!! | TAGTCAATTAATTGATGTAT+TGG | - | chr7_4:11608291-11608310 | Msa1140230:CDS | 20.0% |
! | AAGGAGATTAATAGAGAAAA+GGG | + | chr7_4:11604589-11604608 | None:intergenic | 25.0% |
! | CCATAAAGTGAATGAAATTA+GGG | + | chr7_4:11604749-11604768 | None:intergenic | 25.0% |
! | CTTTATCTTCTTATAATCTC+CGG | + | chr7_4:11605075-11605094 | None:intergenic | 25.0% |
! | ATTATAAGAAGATAAAGGAG+TGG | - | chr7_4:11605078-11605097 | Msa1140230:intron | 25.0% |
! | TTATAAGAAGATAAAGGAGT+GGG | - | chr7_4:11605079-11605098 | Msa1140230:intron | 25.0% |
!! | TTAGATTGAAATTGTTTTCG+GGG | - | chr7_4:11605534-11605553 | Msa1140230:intron | 25.0% |
! | TAAATAATTACAGCTATTGG+GGG | - | chr7_4:11605647-11605666 | Msa1140230:intron | 25.0% |
! | TAGTGTTAATTACAGGTATT+AGG | - | chr7_4:11605862-11605881 | Msa1140230:intron | 25.0% |
! | AGTGTTAATTACAGGTATTA+GGG | - | chr7_4:11605863-11605882 | Msa1140230:intron | 25.0% |
! | TTGAAACACTGCAATTTAAT+AGG | + | chr7_4:11605950-11605969 | None:intergenic | 25.0% |
!!! | GTTTTATGTTTTAAAGTTGG+AGG | - | chr7_4:11606031-11606050 | Msa1140230:intron | 25.0% |
! | TTAATAATCAAGGACAACAA+CGG | + | chr7_4:11606102-11606121 | None:intergenic | 25.0% |
! | AAGGTAAATAGTGTTCTTAA+TGG | - | chr7_4:11606199-11606218 | Msa1140230:intron | 25.0% |
! | TCGTTCTTATGTGATATATT+TGG | - | chr7_4:11606300-11606319 | Msa1140230:intron | 25.0% |
! | CGTTCTTATGTGATATATTT+GGG | - | chr7_4:11606301-11606320 | Msa1140230:intron | 25.0% |
!!! | AAATCCAAGGTTTTAAATCT+TGG | - | chr7_4:11606578-11606597 | Msa1140230:intron | 25.0% |
! | CTCTCAAATCATAATAATAC+TGG | + | chr7_4:11606801-11606820 | None:intergenic | 25.0% |
! | TGACCTTATATTTGTTTGTT+TGG | - | chr7_4:11606824-11606843 | Msa1140230:intron | 25.0% |
! | TGTCCAAACAAACAAATATA+AGG | + | chr7_4:11606830-11606849 | None:intergenic | 25.0% |
! | TATATTTGTTTGTTTGGACA+TGG | - | chr7_4:11606830-11606849 | Msa1140230:intron | 25.0% |
! | TATAATAGGTACTAAGTTTG+GGG | + | chr7_4:11606895-11606914 | None:intergenic | 25.0% |
! | CTATAATAGGTACTAAGTTT+GGG | + | chr7_4:11606896-11606915 | None:intergenic | 25.0% |
! | ACTATAATAGGTACTAAGTT+TGG | + | chr7_4:11606897-11606916 | None:intergenic | 25.0% |
!! | AGAAGATAGCTTTCATATTT+TGG | + | chr7_4:11606948-11606967 | None:intergenic | 25.0% |
! | AATTAACCAAAATTCATCTG+CGG | + | chr7_4:11607121-11607140 | None:intergenic | 25.0% |
! | ATCAAATTAACTTAGAGTTG+AGG | + | chr7_4:11607501-11607520 | None:intergenic | 25.0% |
! | TGAACTTCCTTATGAATAAA+TGG | - | chr7_4:11607772-11607791 | Msa1140230:CDS | 25.0% |
! | AAGTTGTAAGTACTATGTAA+TGG | + | chr7_4:11608007-11608026 | None:intergenic | 25.0% |
! | AGTACATATAATAGGCATAA+AGG | - | chr7_4:11608058-11608077 | Msa1140230:CDS | 25.0% |
! | ATTGATGTATTGGAGAAAAA+TGG | - | chr7_4:11608301-11608320 | Msa1140230:CDS | 25.0% |
! | TTGATGTATTGGAGAAAAAT+GGG | - | chr7_4:11608302-11608321 | Msa1140230:CDS | 25.0% |
! | TTTGACCAAAAAATAATGCA+GGG | + | chr7_4:11608525-11608544 | None:intergenic | 25.0% |
! | ATTTGACCAAAAAATAATGC+AGG | + | chr7_4:11608526-11608545 | None:intergenic | 25.0% |
GAAGGAGATTAATAGAGAAA+AGG | + | chr7_4:11604590-11604609 | None:intergenic | 30.0% | |
CCCTAATTTCATTCACTTTA+TGG | - | chr7_4:11604746-11604765 | Msa1140230:CDS | 30.0% | |
GCCATAAAGTGAATGAAATT+AGG | + | chr7_4:11604750-11604769 | None:intergenic | 30.0% | |
TTTCATTCACTTTATGGCTT+TGG | - | chr7_4:11604752-11604771 | Msa1140230:CDS | 30.0% | |
!!! | GAGATTTTGGTTTTGATACA+GGG | - | chr7_4:11604897-11604916 | Msa1140230:CDS | 30.0% |
TCTTCGTATTGTAAGAAACA+CGG | - | chr7_4:11605002-11605021 | Msa1140230:CDS | 30.0% | |
CGGAGATTATAAGAAGATAA+AGG | - | chr7_4:11605073-11605092 | Msa1140230:intron | 30.0% | |
!! | GTTGTTTTCTGATTTTGAGA+AGG | - | chr7_4:11605361-11605380 | Msa1140230:intron | 30.0% |
CAAAATAACCAACCTGATAT+AGG | + | chr7_4:11605434-11605453 | None:intergenic | 30.0% | |
!! | AGGTTGGTTATTTTGTTTCA+TGG | - | chr7_4:11605439-11605458 | Msa1140230:intron | 30.0% |
GTCATGTGATTACATTCAAT+CGG | - | chr7_4:11605614-11605633 | Msa1140230:intron | 30.0% | |
AACACTGCAATTTAATAGGA+AGG | + | chr7_4:11605946-11605965 | None:intergenic | 30.0% | |
! | GACAACATTGGTTAAAACTA+TGG | + | chr7_4:11606339-11606358 | None:intergenic | 30.0% |
! | AAAACTATTGTTATCGACTG+CGG | + | chr7_4:11606498-11606517 | None:intergenic | 30.0% |
TGAAATCATGGATAAATCCA+AGG | - | chr7_4:11606565-11606584 | Msa1140230:intron | 30.0% | |
! | AAGACCAAGATTTAAAACCT+TGG | + | chr7_4:11606585-11606604 | None:intergenic | 30.0% |
TGTTGTGATTCTTAGTATTG+CGG | - | chr7_4:11606604-11606623 | Msa1140230:intron | 30.0% | |
CATTGCACAAAGCTATTAAT+TGG | + | chr7_4:11606751-11606770 | None:intergenic | 30.0% | |
! | TGAAGCACTTTGACTATAAT+AGG | + | chr7_4:11606909-11606928 | None:intergenic | 30.0% |
! | GTAGCACAATTTACCATTTT+TGG | + | chr7_4:11606988-11607007 | None:intergenic | 30.0% |
!!! | AGGATTTTAGCTTATTTGAG+AGG | + | chr7_4:11607018-11607037 | None:intergenic | 30.0% |
GTAGCATCGTAAACAATAAA+AGG | + | chr7_4:11607089-11607108 | None:intergenic | 30.0% | |
!!! | GCAGATGAATTTTGGTTAAT+TGG | - | chr7_4:11607120-11607139 | Msa1140230:intron | 30.0% |
TGTAGAATAGAATAAGCAAC+TGG | + | chr7_4:11607158-11607177 | None:intergenic | 30.0% | |
! | TTTGGGATTTCAATAATGCT+AGG | - | chr7_4:11607199-11607218 | Msa1140230:intron | 30.0% |
! | CGTGATTGTTCATTTAAGAT+TGG | - | chr7_4:11607298-11607317 | Msa1140230:intron | 30.0% |
TAAAGGAGTTGAGGAATTAA+AGG | + | chr7_4:11607452-11607471 | None:intergenic | 30.0% | |
! | TCTCTAACAACAGTTTTCTT+TGG | - | chr7_4:11607548-11607567 | Msa1140230:intron | 30.0% |
!! | TTTCGTTTCTGAAATTGTCT+CGG | - | chr7_4:11607580-11607599 | Msa1140230:intron | 30.0% |
CAATTTAACCCTAAGATTGA+AGG | + | chr7_4:11607685-11607704 | None:intergenic | 30.0% | |
CTTCAATCTTAGGGTTAAAT+TGG | - | chr7_4:11607683-11607702 | Msa1140230:intron | 30.0% | |
GTACACACCATTTATTCATA+AGG | + | chr7_4:11607782-11607801 | None:intergenic | 30.0% | |
ATGTATAAGTAGCACTTCTA+GGG | + | chr7_4:11607824-11607843 | None:intergenic | 30.0% | |
TATGTATAAGTAGCACTTCT+AGG | + | chr7_4:11607825-11607844 | None:intergenic | 30.0% | |
GTTGCTCATATTATTTGAGT+AGG | + | chr7_4:11607914-11607933 | None:intergenic | 30.0% | |
CTATGTCGAGTACATATAAT+AGG | - | chr7_4:11608050-11608069 | Msa1140230:CDS | 30.0% | |
CATATAATAGGCATAAAGGT+AGG | - | chr7_4:11608062-11608081 | Msa1140230:CDS | 30.0% | |
GTTGGTACCTATAAAAGTAA+AGG | + | chr7_4:11608158-11608177 | None:intergenic | 30.0% | |
! | TCAGAACATCAATTTTCAGT+TGG | - | chr7_4:11608351-11608370 | Msa1140230:CDS | 30.0% |
GTAATAGTGTACATACCATT+TGG | - | chr7_4:11608482-11608501 | Msa1140230:five_prime_UTR | 30.0% | |
TAAACTGTTACTGCCATTAT+AGG | - | chr7_4:11608568-11608587 | Msa1140230:five_prime_UTR | 30.0% | |
ATATAGTCCTAGTCCTATAA+TGG | + | chr7_4:11608584-11608603 | None:intergenic | 30.0% | |
TAGGACTATATACAACCTTT+GGG | - | chr7_4:11608593-11608612 | Msa1140230:five_prime_UTR | 30.0% | |
!! | TCTTTCTAAAACGCCGTTAA+CGG | - | chr7_4:11604665-11604684 | Msa1140230:three_prime_UTR | 35.0% |
!!! | GGAGATTTTGGTTTTGATAC+AGG | - | chr7_4:11604896-11604915 | Msa1140230:CDS | 35.0% |
!!! | ATTGCCTGGGTATTTTGATA+AGG | - | chr7_4:11605169-11605188 | Msa1140230:intron | 35.0% |
GATAGTAATAGGAAAGTGAG+TGG | - | chr7_4:11605329-11605348 | Msa1140230:intron | 35.0% | |
!! | TTCTGATTTTGAGAAGGATG+AGG | - | chr7_4:11605367-11605386 | Msa1140230:intron | 35.0% |
!! | TTTTGAGAAGGATGAGGTTT+TGG | - | chr7_4:11605373-11605392 | Msa1140230:intron | 35.0% |
GAATGTAATCACATGACATG+TGG | + | chr7_4:11605611-11605630 | None:intergenic | 35.0% | |
ACATGTTTGATGTTTGACGT+CGG | + | chr7_4:11605697-11605716 | None:intergenic | 35.0% | |
TTGAATAATCACAGGTTTCG+AGG | - | chr7_4:11605746-11605765 | Msa1140230:intron | 35.0% | |
! | TTCAATGTCACTAGCATTGA+TGG | - | chr7_4:11605965-11605984 | Msa1140230:intron | 35.0% |
!!! | TGTTTTAAAGTTGGAGGGTT+TGG | - | chr7_4:11606037-11606056 | Msa1140230:intron | 35.0% |
!!! | GTTTTAAAGTTGGAGGGTTT+GGG | - | chr7_4:11606038-11606057 | Msa1140230:intron | 35.0% |
TGGCAGATATTTGACAACAT+TGG | + | chr7_4:11606351-11606370 | None:intergenic | 35.0% | |
ATGTTGTCAAATATCTGCCA+TGG | - | chr7_4:11606351-11606370 | Msa1140230:intron | 35.0% | |
CATCCTTCACAAATTGATCA+TGG | + | chr7_4:11606408-11606427 | None:intergenic | 35.0% | |
CATGATCAATTTGTGAAGGA+TGG | - | chr7_4:11606406-11606425 | Msa1140230:intron | 35.0% | |
TGAGTCATCATAAAACACCA+TGG | + | chr7_4:11606437-11606456 | None:intergenic | 35.0% | |
GACTCATAATCGCAGATTTA+TGG | - | chr7_4:11606451-11606470 | Msa1140230:intron | 35.0% | |
TGCACTAGTGTGTCAAAAAA+AGG | + | chr7_4:11606728-11606747 | None:intergenic | 35.0% | |
TCATCTTGGTCAGATGAATA+GGG | + | chr7_4:11606863-11606882 | None:intergenic | 35.0% | |
ATCATCTTGGTCAGATGAAT+AGG | + | chr7_4:11606864-11606883 | None:intergenic | 35.0% | |
!! | CCATTTTTGGAGACAAAGAA+AGG | + | chr7_4:11606975-11606994 | None:intergenic | 35.0% |
CCTTTCTTTGTCTCCAAAAA+TGG | - | chr7_4:11606972-11606991 | Msa1140230:intron | 35.0% | |
! | TTCTTACCGCAGATGAATTT+TGG | - | chr7_4:11607112-11607131 | Msa1140230:intron | 35.0% |
AATAATGCTAGGACACACAT+AGG | - | chr7_4:11607210-11607229 | Msa1140230:intron | 35.0% | |
TTAAATGAACAATCACGCCT+TGG | + | chr7_4:11607295-11607314 | None:intergenic | 35.0% | |
AGTCCTGAAACTGTAAATGT+TGG | - | chr7_4:11607337-11607356 | Msa1140230:intron | 35.0% | |
GTCCTGAAACTGTAAATGTT+GGG | - | chr7_4:11607338-11607357 | Msa1140230:intron | 35.0% | |
TACCCAACATTTACAGTTTC+AGG | + | chr7_4:11607343-11607362 | None:intergenic | 35.0% | |
TCATGATTCAAGTCATGAGA+AGG | + | chr7_4:11607428-11607447 | None:intergenic | 35.0% | |
TTAAGGGATTAAAGGAGTTG+AGG | + | chr7_4:11607461-11607480 | None:intergenic | 35.0% | |
! | GGTTTGAGTTAAGGGATTAA+AGG | + | chr7_4:11607469-11607488 | None:intergenic | 35.0% |
!! | GCTCAATTGGTTTGAGTTAA+GGG | + | chr7_4:11607477-11607496 | None:intergenic | 35.0% |
!! | AGCTCAATTGGTTTGAGTTA+AGG | + | chr7_4:11607478-11607497 | None:intergenic | 35.0% |
TGTTAATCCGAGACAATTTC+AGG | + | chr7_4:11607624-11607643 | None:intergenic | 35.0% | |
AGCCTAAATCCTTCAATCTT+AGG | - | chr7_4:11607673-11607692 | Msa1140230:intron | 35.0% | |
GCCTAAATCCTTCAATCTTA+GGG | - | chr7_4:11607674-11607693 | Msa1140230:intron | 35.0% | |
ACCCTAAGATTGAAGGATTT+AGG | + | chr7_4:11607678-11607697 | None:intergenic | 35.0% | |
! | TCTCCTTGTGACTTTTCTTT+AGG | - | chr7_4:11607873-11607892 | Msa1140230:CDS | 35.0% |
! | CTCCTTGTGACTTTTCTTTA+GGG | - | chr7_4:11607874-11607893 | Msa1140230:CDS | 35.0% |
! | TCCTTGTGACTTTTCTTTAG+GGG | - | chr7_4:11607875-11607894 | Msa1140230:CDS | 35.0% |
ATTTGAGTAGGCTTAGATTG+TGG | + | chr7_4:11607902-11607921 | None:intergenic | 35.0% | |
AGGCATAAAGGTAGGATTTA+AGG | - | chr7_4:11608070-11608089 | Msa1140230:CDS | 35.0% | |
! | AAAGGTAGGATTTAAGGTTC+TGG | - | chr7_4:11608076-11608095 | Msa1140230:CDS | 35.0% |
CTAGGACTATATACAACCTT+TGG | - | chr7_4:11608592-11608611 | Msa1140230:five_prime_UTR | 35.0% | |
! | CGTGTTTCCCTATTTTGTGA+CGG | + | chr7_4:11604696-11604715 | None:intergenic | 40.0% |
CAGTTCCATCATCGGAATTA+GGG | + | chr7_4:11604788-11604807 | None:intergenic | 40.0% | |
ACAGTTCCATCATCGGAATT+AGG | + | chr7_4:11604789-11604808 | None:intergenic | 40.0% | |
!! | TCCGATGATGGAACTGTTAA+CGG | - | chr7_4:11604792-11604811 | Msa1140230:CDS | 40.0% |
ACCGTTAACAGTTCCATCAT+CGG | + | chr7_4:11604796-11604815 | None:intergenic | 40.0% | |
GATGGAACTGTTAACGGTAA+CGG | - | chr7_4:11604798-11604817 | Msa1140230:CDS | 40.0% | |
!! | GGTTGATGAGGAATGATTTG+AGG | - | chr7_4:11605135-11605154 | Msa1140230:intron | 40.0% |
ACCTCCTTATCAAAATACCC+AGG | + | chr7_4:11605176-11605195 | None:intergenic | 40.0% | |
TAATAGGAAAGTGAGTGGTG+AGG | - | chr7_4:11605334-11605353 | Msa1140230:intron | 40.0% | |
AACCAACCTGATATAGGAAC+AGG | + | chr7_4:11605428-11605447 | None:intergenic | 40.0% | |
! | ATTAGGGTTAGTGTCGAATC+TGG | - | chr7_4:11605879-11605898 | Msa1140230:intron | 40.0% |
! | TTAGTGTCGAATCTGGTGTT+AGG | - | chr7_4:11605886-11605905 | Msa1140230:intron | 40.0% |
TTGTCAAATATCTGCCATGG+CGG | - | chr7_4:11606354-11606373 | Msa1140230:intron | 40.0% | |
CTGCCATGATCAATTTGTGA+AGG | - | chr7_4:11606402-11606421 | Msa1140230:intron | 40.0% | |
AGATTTATGGCTTTCTGCCA+TGG | - | chr7_4:11606464-11606483 | Msa1140230:intron | 40.0% | |
AATCGCAGTTGAATGTGATG+TGG | - | chr7_4:11606629-11606648 | Msa1140230:intron | 40.0% | |
TGTTTGTTTGGACATGGCTT+AGG | - | chr7_4:11606836-11606855 | Msa1140230:intron | 40.0% | |
TCTGACCAAGATGATGTGAT+AGG | - | chr7_4:11606869-11606888 | Msa1140230:intron | 40.0% | |
GAAAGCAAGCTGTCTCATAA+AGG | + | chr7_4:11607038-11607057 | None:intergenic | 40.0% | |
TCGCACAAAGGTTGTAAACA+GGG | + | chr7_4:11607249-11607268 | None:intergenic | 40.0% | |
TTCGCACAAAGGTTGTAAAC+AGG | + | chr7_4:11607250-11607269 | None:intergenic | 40.0% | |
TTTACAACCTTTGTGCGAAC+AGG | - | chr7_4:11607251-11607270 | Msa1140230:intron | 40.0% | |
CTCTATAGGATACACATCCA+AGG | - | chr7_4:11607275-11607294 | Msa1140230:intron | 40.0% | |
TTAGAGTTGAGGAGCTCAAT+TGG | + | chr7_4:11607490-11607509 | None:intergenic | 40.0% | |
TGTGGATCCTGAAATTGTCT+CGG | - | chr7_4:11607614-11607633 | Msa1140230:intron | 40.0% | |
GGGAAAATATACAGCAAGTC+TGG | + | chr7_4:11607804-11607823 | None:intergenic | 40.0% | |
ACCCCTAAAGAAAAGTCACA+AGG | + | chr7_4:11607879-11607898 | None:intergenic | 40.0% | |
! | CAACTTTTGACCTTCAGCTT+AGG | - | chr7_4:11608021-11608040 | Msa1140230:CDS | 40.0% |
ATAGTCACATCCTAAGCTGA+AGG | + | chr7_4:11608034-11608053 | None:intergenic | 40.0% | |
GATGCTAAGTGAACAACTAG+AGG | - | chr7_4:11608327-11608346 | Msa1140230:CDS | 40.0% | |
GATAAGCTTGCAAATGCTCT+TGG | - | chr7_4:11608421-11608440 | Msa1140230:exon | 40.0% | |
TGATAAGCTGTAGTGCAAGA+AGG | - | chr7_4:11608453-11608472 | Msa1140230:five_prime_UTR | 40.0% | |
! | CATTTGGAGTCATCAGTAGT+GGG | - | chr7_4:11608498-11608517 | Msa1140230:five_prime_UTR | 40.0% |
!!! | TGGGTCCCTGCATTATTTTT+TGG | - | chr7_4:11608517-11608536 | Msa1140230:five_prime_UTR | 40.0% |
GTTACTGCCATTATAGGACT+AGG | - | chr7_4:11608574-11608593 | Msa1140230:five_prime_UTR | 40.0% | |
!! | TTCTAAAACGCCGTTAACGG+AGG | - | chr7_4:11604668-11604687 | Msa1140230:three_prime_UTR | 45.0% |
CCATCATCGGAATTAGGGTT+TGG | + | chr7_4:11604783-11604802 | None:intergenic | 45.0% | |
CCAAACCCTAATTCCGATGA+TGG | - | chr7_4:11604780-11604799 | Msa1140230:CDS | 45.0% | |
!! | TTGGACTAGGCAGGAGATTT+TGG | - | chr7_4:11604884-11604903 | Msa1140230:CDS | 45.0% |
GAAAGAGTGATGCTGAAAGC+CGG | - | chr7_4:11604919-11604938 | Msa1140230:CDS | 45.0% | |
! | TGCTGAAAGCCGGTTTAAAC+CGG | - | chr7_4:11604929-11604948 | Msa1140230:CDS | 45.0% |
! | TTGGTTCGAGTGAACCGAAA+TGG | - | chr7_4:11604970-11604989 | Msa1140230:CDS | 45.0% |
TGGTTCGAGTGAACCGAAAT+GGG | - | chr7_4:11604971-11604990 | Msa1140230:CDS | 45.0% | |
GAAGAAACCAACGCCCATTT+CGG | + | chr7_4:11604987-11605006 | None:intergenic | 45.0% | |
GTAAGAAACACGGTGTGAAC+CGG | - | chr7_4:11605012-11605031 | Msa1140230:intron | 45.0% | |
TAAGAAACACGGTGTGAACC+GGG | - | chr7_4:11605013-11605032 | Msa1140230:intron | 45.0% | |
TCTTCTTATAATCTCCGGCG+AGG | + | chr7_4:11605070-11605089 | None:intergenic | 45.0% | |
GAGTCAGGTGAGAGATGAAA+CGG | - | chr7_4:11605103-11605122 | Msa1140230:intron | 45.0% | |
! | GAGATGAAACGGAGTCGTTT+TGG | - | chr7_4:11605114-11605133 | Msa1140230:intron | 45.0% |
GGAATGATTTGAGGAGAGAG+AGG | - | chr7_4:11605144-11605163 | Msa1140230:intron | 45.0% | |
!!! | GCCTGGGTATTTTGATAAGG+AGG | - | chr7_4:11605172-11605191 | Msa1140230:intron | 45.0% |
!! | TGAGAAGGATGAGGTTTTGG+TGG | - | chr7_4:11605376-11605395 | Msa1140230:intron | 45.0% |
CCTGATATAGGAACAGGTGA+AGG | + | chr7_4:11605422-11605441 | None:intergenic | 45.0% | |
CCTTCACCTGTTCCTATATC+AGG | - | chr7_4:11605419-11605438 | Msa1140230:intron | 45.0% | |
CACCTGTTCCTATATCAGGT+TGG | - | chr7_4:11605423-11605442 | Msa1140230:intron | 45.0% | |
CTTGAGCATTTCCTTCTCCT+TGG | + | chr7_4:11606182-11606201 | None:intergenic | 45.0% | |
CAAGGAGAAGGAAATGCTCA+AGG | - | chr7_4:11606180-11606199 | Msa1140230:intron | 45.0% | |
! | CTATTGTTATCGACTGCGGA+TGG | + | chr7_4:11606494-11606513 | None:intergenic | 45.0% |
! | AGCTTTGTGCAATGTTACCG+TGG | - | chr7_4:11606757-11606776 | Msa1140230:intron | 45.0% |
GCACAAAGGTTGTAAACAGG+GGG | + | chr7_4:11607247-11607266 | None:intergenic | 45.0% | |
CGCACAAAGGTTGTAAACAG+GGG | + | chr7_4:11607248-11607267 | None:intergenic | 45.0% | |
ATAGAGTCCTGTTCGCACAA+AGG | + | chr7_4:11607261-11607280 | None:intergenic | 45.0% | |
TTGTGCGAACAGGACTCTAT+AGG | - | chr7_4:11607261-11607280 | Msa1140230:intron | 45.0% | |
GTCTCGGAAAGACAAATGTG+TGG | - | chr7_4:11607596-11607615 | Msa1140230:intron | 45.0% | |
!! | GGCTGGTTGTTTCTCATTGT+TGG | + | chr7_4:11608176-11608195 | None:intergenic | 45.0% |
! | AAACGGGCTCTACATCTCAA+GGG | - | chr7_4:11608206-11608225 | Msa1140230:CDS | 45.0% |
TTGCAGTTTCATTCTGCTGC+TGG | + | chr7_4:11608381-11608400 | None:intergenic | 45.0% | |
CCACTACTGATGACTCCAAA+TGG | + | chr7_4:11608500-11608519 | None:intergenic | 45.0% | |
! | CCATTTGGAGTCATCAGTAG+TGG | - | chr7_4:11608497-11608516 | Msa1140230:five_prime_UTR | 45.0% |
!! | AAAATATAAATTAATAATCA+AGG | + | chr7_4:11606112-11606131 | None:intergenic | 5.0% |
!!! | ATATATATTTTTTTATGTTA+GGG | - | chr7_4:11606683-11606702 | Msa1140230:intron | 5.0% |
!! | GGAGGCACCGTCACAAAATA+GGG | - | chr7_4:11604686-11604705 | Msa1140230:three_prime_UTR | 50.0% |
TGGCGAGGATGGAAAACCAA+CGG | - | chr7_4:11604848-11604867 | Msa1140230:CDS | 50.0% | |
! | GCTGAAAGCCGGTTTAAACC+GGG | - | chr7_4:11604930-11604949 | Msa1140230:CDS | 50.0% |
! | AAAGCCGGTTTAAACCGGGT+CGG | - | chr7_4:11604934-11604953 | Msa1140230:CDS | 50.0% |
CATTCCGACCCGGTTTAAAC+CGG | + | chr7_4:11604941-11604960 | None:intergenic | 50.0% | |
GGTTTAAACCGGGTCGGAAT+GGG | - | chr7_4:11604940-11604959 | Msa1140230:CDS | 50.0% | |
AAGAAACACGGTGTGAACCG+GGG | - | chr7_4:11605014-11605033 | Msa1140230:intron | 50.0% | |
GTCCGATTCAGTGTAGGAAG+CGG | - | chr7_4:11605036-11605055 | Msa1140230:intron | 50.0% | |
CACCGCTTCCTACACTGAAT+CGG | + | chr7_4:11605041-11605060 | None:intergenic | 50.0% | |
GATAAAGGAGTGGGAGAGTC+AGG | - | chr7_4:11605088-11605107 | Msa1140230:intron | 50.0% | |
!!! | CGGAGTCGTTTTGGTTGATG+AGG | - | chr7_4:11605123-11605142 | Msa1140230:intron | 50.0% |
AGGAGAGAGAGGAAATTGCC+TGG | - | chr7_4:11605155-11605174 | Msa1140230:intron | 50.0% | |
GGAGAGAGAGGAAATTGCCT+GGG | - | chr7_4:11605156-11605175 | Msa1140230:intron | 50.0% | |
! | GATACTTGATTCGCCGTCGA+TGG | - | chr7_4:11605202-11605221 | Msa1140230:intron | 50.0% |
!! | AACCGTCTCTGAAACCGACA+CGG | + | chr7_4:11605282-11605301 | None:intergenic | 50.0% |
AGGAAAGTGAGTGGTGAGGA+TGG | - | chr7_4:11605338-11605357 | Msa1140230:intron | 50.0% | |
GGAAAGTGAGTGGTGAGGAT+GGG | - | chr7_4:11605339-11605358 | Msa1140230:intron | 50.0% | |
TTGGAGGGTTTGGGAGACAA+TGG | - | chr7_4:11606047-11606066 | Msa1140230:intron | 50.0% | |
!! | ATATCTGCCATGGCGGATTG+CGG | - | chr7_4:11606361-11606380 | Msa1140230:intron | 50.0% |
TGGGGCCTATCACATCATCT+TGG | + | chr7_4:11606877-11606896 | None:intergenic | 50.0% | |
ACCAGCCTCGAATCCAGAAA+CGG | - | chr7_4:11608189-11608208 | Msa1140230:CDS | 50.0% | |
TGAGATGTAGAGCCCGTTTC+TGG | + | chr7_4:11608205-11608224 | None:intergenic | 50.0% | |
! | GAAACGGGCTCTACATCTCA+AGG | - | chr7_4:11608205-11608224 | Msa1140230:CDS | 50.0% |
! | AACGGGCTCTACATCTCAAG+GGG | - | chr7_4:11608207-11608226 | Msa1140230:CDS | 50.0% |
CATCTCAAGGGGAACGTAAG+AGG | - | chr7_4:11608218-11608237 | Msa1140230:CDS | 50.0% | |
AAGGGGAACGTAAGAGGAAG+CGG | - | chr7_4:11608224-11608243 | Msa1140230:CDS | 50.0% | |
CTCTTCATTGCCGTCTCCAT+TGG | + | chr7_4:11608257-11608276 | None:intergenic | 50.0% | |
CAATGGAGACGGCAATGAAG+AGG | - | chr7_4:11608255-11608274 | Msa1140230:CDS | 50.0% | |
TGTGACGGTGCCTCCGTTAA+CGG | + | chr7_4:11604681-11604700 | None:intergenic | 55.0% | |
!! | CGGAGGCACCGTCACAAAAT+AGG | - | chr7_4:11604685-11604704 | Msa1140230:three_prime_UTR | 55.0% |
AGGATGGAAAACCAACGGCG+AGG | - | chr7_4:11604853-11604872 | Msa1140230:CDS | 55.0% | |
ATCTCCTGCCTAGTCCAACG+TGG | + | chr7_4:11604882-11604901 | None:intergenic | 55.0% | |
CGGTTTAAACCGGGTCGGAA+TGG | - | chr7_4:11604939-11604958 | Msa1140230:CDS | 55.0% | |
GAGTGAACCGAAATGGGCGT+TGG | - | chr7_4:11604977-11604996 | Msa1140230:CDS | 55.0% | |
TCCTACACTGAATCGGACCC+CGG | + | chr7_4:11605034-11605053 | None:intergenic | 55.0% | |
CGATTCAGTGTAGGAAGCGG+TGG | - | chr7_4:11605039-11605058 | Msa1140230:intron | 55.0% | |
! | ACTTGATTCGCCGTCGATGG+CGG | - | chr7_4:11605205-11605224 | Msa1140230:intron | 55.0% |
!! | GGCAGCATCGGTTGTTGTTC+CGG | - | chr7_4:11605247-11605266 | Msa1140230:intron | 55.0% |
TCCGGTGAATGTGTCCGTGT+CGG | - | chr7_4:11605265-11605284 | Msa1140230:intron | 55.0% | |
ACCGACACGGACACATTCAC+CGG | + | chr7_4:11605269-11605288 | None:intergenic | 55.0% | |
!! | GTCCGTGTCGGTTTCAGAGA+CGG | - | chr7_4:11605277-11605296 | Msa1140230:intron | 55.0% |
!! | GTGTCGGTTTCAGAGACGGT+TGG | - | chr7_4:11605281-11605300 | Msa1140230:intron | 55.0% |
TCGGTTTCAGAGACGGTTGG+AGG | - | chr7_4:11605284-11605303 | Msa1140230:intron | 55.0% | |
CGGTTTCAGAGACGGTTGGA+GGG | - | chr7_4:11605285-11605304 | Msa1140230:intron | 55.0% | |
GGTTTCAGAGACGGTTGGAG+GGG | - | chr7_4:11605286-11605305 | Msa1140230:intron | 55.0% | |
CAGTTTCTACCACTCCTCCG+AGG | - | chr7_4:11606153-11606172 | Msa1140230:intron | 55.0% | |
TTCCTTCTCCTTGGCAGCCT+CGG | + | chr7_4:11606173-11606192 | None:intergenic | 55.0% | |
CCACAATGCGATTGCAGCTG+AGG | + | chr7_4:11606655-11606674 | None:intergenic | 55.0% | |
CCTCAGCTGCAATCGCATTG+TGG | - | chr7_4:11606652-11606671 | Msa1140230:intron | 55.0% | |
CCAGCCTCGAATCCAGAAAC+GGG | - | chr7_4:11608190-11608209 | Msa1140230:CDS | 55.0% | |
! | AGAGCCCGTTTCTGGATTCG+AGG | + | chr7_4:11608197-11608216 | None:intergenic | 55.0% |
AGGAAGCGGTTCGCAACCAA+TGG | - | chr7_4:11608238-11608257 | Msa1140230:CDS | 55.0% | |
CGGTTCGCAACCAATGGAGA+CGG | - | chr7_4:11608244-11608263 | Msa1140230:CDS | 55.0% | |
TGGAGACGGCAATGAAGAGG+AGG | - | chr7_4:11608258-11608277 | Msa1140230:CDS | 55.0% | |
TCCATCCTCGCCACCGTTCA+CGG | + | chr7_4:11604841-11604860 | None:intergenic | 60.0% | |
AAACCGGGTCGGAATGGGTC+TGG | - | chr7_4:11604945-11604964 | Msa1140230:CDS | 60.0% | |
AACCGGGTCGGAATGGGTCT+GGG | - | chr7_4:11604946-11604965 | Msa1140230:CDS | 60.0% | |
AACCCAGACCCATTCCGACC+CGG | + | chr7_4:11604951-11604970 | None:intergenic | 60.0% | |
GGTCGGAATGGGTCTGGGTT+TGG | - | chr7_4:11604951-11604970 | Msa1140230:CDS | 60.0% | |
ACCGGGGTCCGATTCAGTGT+AGG | - | chr7_4:11605030-11605049 | Msa1140230:intron | 60.0% | |
AGAGACGGTTGGAGGGGATG+AGG | - | chr7_4:11605292-11605311 | Msa1140230:intron | 60.0% | |
! | ACAGCTATTGGGGGCACGTG+TGG | - | chr7_4:11605656-11605675 | Msa1140230:intron | 60.0% |
! | CAGCTATTGGGGGCACGTGT+GGG | - | chr7_4:11605657-11605676 | Msa1140230:intron | 60.0% |
TGTGAAGGATGGCAGCGCCA+TGG | - | chr7_4:11606417-11606436 | Msa1140230:intron | 60.0% | |
! | CCCGTTTCTGGATTCGAGGC+TGG | + | chr7_4:11608193-11608212 | None:intergenic | 60.0% |
ATCCTCGCCACCGTTCACGG+CGG | + | chr7_4:11604838-11604857 | None:intergenic | 65.0% | |
CGAGGCTGCCACGTTGGACT+AGG | - | chr7_4:11604871-11604890 | Msa1140230:CDS | 65.0% | |
! | GCTGCCACGTTGGACTAGGC+AGG | - | chr7_4:11604875-11604894 | Msa1140230:CDS | 65.0% |
AAGCGGTGGAGCAACCTCGC+CGG | - | chr7_4:11605053-11605072 | Msa1140230:intron | 65.0% | |
! | TGATTCGCCGTCGATGGCGG+TGG | - | chr7_4:11605208-11605227 | Msa1140230:intron | 65.0% |
GGCTGCAGCTGTGGCAGCAT+CGG | - | chr7_4:11605235-11605254 | Msa1140230:intron | 65.0% | |
GACGGTTGGAGGGGATGAGG+AGG | - | chr7_4:11605295-11605314 | Msa1140230:intron | 65.0% | |
CTTCTCCTTGGCAGCCTCGG+AGG | + | chr7_4:11606170-11606189 | None:intergenic | 65.0% | |
CTCCGAGGCTGCCAAGGAGA+AGG | - | chr7_4:11606168-11606187 | Msa1140230:intron | 65.0% | |
!! | TCTGCCATGGCGGATTGCGG+TGG | - | chr7_4:11606364-11606383 | Msa1140230:intron | 65.0% |
!! | CTGCCATGGCGGATTGCGGT+GGG | - | chr7_4:11606365-11606384 | Msa1140230:intron | 65.0% |
TCTCCCACCGCAATCCGCCA+TGG | + | chr7_4:11606371-11606390 | None:intergenic | 65.0% | |
CGACTGCGGATGGCAGACCA+TGG | + | chr7_4:11606484-11606503 | None:intergenic | 65.0% | |
CCACCGTCCTCCGCCGTGAA+CGG | - | chr7_4:11604825-11604844 | Msa1140230:CDS | 70.0% | |
CCACCGTTCACGGCGGAGGA+CGG | + | chr7_4:11604831-11604850 | None:intergenic | 70.0% | |
GCCGTGAACGGTGGCGAGGA+TGG | - | chr7_4:11604837-11604856 | Msa1140230:CDS | 70.0% | |
CAACGTGGCAGCCTCGCCGT+TGG | + | chr7_4:11604867-11604886 | None:intergenic | 70.0% | |
CAACGGCGAGGCTGCCACGT+TGG | - | chr7_4:11604865-11604884 | Msa1140230:CDS | 70.0% | |
CCTTGGCAGCCTCGGAGGAG+TGG | + | chr7_4:11606165-11606184 | None:intergenic | 70.0% | |
CCACTCCTCCGAGGCTGCCA+AGG | - | chr7_4:11606162-11606181 | Msa1140230:intron | 70.0% | |
CCGTTCACGGCGGAGGACGG+TGG | + | chr7_4:11604828-11604847 | None:intergenic | 75.0% | |
CCGTCCTCCGCCGTGAACGG+TGG | - | chr7_4:11604828-11604847 | Msa1140230:CDS | 75.0% | |
CTCGCCACCGTTCACGGCGG+AGG | + | chr7_4:11604835-11604854 | None:intergenic | 75.0% | |
CTCCGCCGTGAACGGTGGCG+AGG | - | chr7_4:11604833-11604852 | Msa1140230:CDS | 75.0% | |
! | GCCGTCGATGGCGGTGGCAG+CGG | - | chr7_4:11605214-11605233 | Msa1140230:intron | 75.0% |
GCCGCTGCCACCGCCATCGA+CGG | + | chr7_4:11605218-11605237 | None:intergenic | 75.0% | |
GGTGGCAGCGGCTGCAGCTG+TGG | - | chr7_4:11605226-11605245 | Msa1140230:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 11604574 | 11608624 | 11604574 | ID=Msa1140230;Name=Msa1140230 |
chr7_4 | mRNA | 11604574 | 11608624 | 11604574 | ID=Msa1140230-mRNA-1;Parent=Msa1140230;Name=Msa1140230-mRNA-1;_AED=0.01;_eAED=0.01;_QI=191|1|1|1|1|1|3|159|341 |
chr7_4 | exon | 11604574 | 11605028 | 11604574 | ID=Msa1140230-mRNA-1:exon:2778;Parent=Msa1140230-mRNA-1 |
chr7_4 | exon | 11606997 | 11607050 | 11606997 | ID=Msa1140230-mRNA-1:exon:2777;Parent=Msa1140230-mRNA-1 |
chr7_4 | exon | 11607758 | 11608624 | 11607758 | ID=Msa1140230-mRNA-1:exon:2776;Parent=Msa1140230-mRNA-1 |
chr7_4 | five_prime_UTR | 11608434 | 11608624 | 11608434 | ID=Msa1140230-mRNA-1:five_prime_utr;Parent=Msa1140230-mRNA-1 |
chr7_4 | CDS | 11607758 | 11608433 | 11607758 | ID=Msa1140230-mRNA-1:cds;Parent=Msa1140230-mRNA-1 |
chr7_4 | CDS | 11606997 | 11607050 | 11606997 | ID=Msa1140230-mRNA-1:cds;Parent=Msa1140230-mRNA-1 |
chr7_4 | CDS | 11604733 | 11605028 | 11604733 | ID=Msa1140230-mRNA-1:cds;Parent=Msa1140230-mRNA-1 |
chr7_4 | three_prime_UTR | 11604574 | 11604732 | 11604574 | ID=Msa1140230-mRNA-1:three_prime_utr;Parent=Msa1140230-mRNA-1 |
Gene Sequence |
Protein sequence |