Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082250 | XP_013450398.1 | 96.636 | 327 | 11 | 0 | 1 | 327 | 1 | 327 | 0.0 | 658 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082250 | sp|Q8GX84|C3H1_ARATH | 69.688 | 320 | 94 | 2 | 8 | 327 | 20 | 336 | 4.72e-163 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082250 | A0A072U502 | 96.636 | 327 | 11 | 0 | 1 | 327 | 1 | 327 | 0.0 | 658 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1082250 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015090 | Msa1082250 | 0.806170 | 9.369999e-50 | -8.615850e-47 |
| Msa0018940 | Msa1082250 | 0.809331 | 1.995064e-50 | -8.615850e-47 |
| Msa0021220 | Msa1082250 | 0.808906 | 2.459977e-50 | -8.615850e-47 |
| Msa0033950 | Msa1082250 | 0.817881 | 2.620147e-52 | -8.615850e-47 |
| Msa0034030 | Msa1082250 | 0.816478 | 5.417954e-52 | -8.615850e-47 |
| Msa0036160 | Msa1082250 | 0.805415 | 1.350014e-49 | -8.615850e-47 |
| Msa0037880 | Msa1082250 | 0.809914 | 1.494784e-50 | -8.615850e-47 |
| Msa0049750 | Msa1082250 | 0.808477 | 3.038436e-50 | -8.615850e-47 |
| Msa0050200 | Msa1082250 | 0.802493 | 5.464994e-49 | -8.615850e-47 |
| Msa0079180 | Msa1082250 | 0.807622 | 4.620561e-50 | -8.615850e-47 |
| Msa0096700 | Msa1082250 | 0.823697 | 1.204421e-53 | -8.615850e-47 |
| Msa0098990 | Msa1082250 | 0.807641 | 4.578075e-50 | -8.615850e-47 |
| Msa0115400 | Msa1082250 | 0.803764 | 2.983311e-49 | -8.615850e-47 |
| Msa0605000 | Msa1082250 | 0.815744 | 7.902231e-52 | -8.615850e-47 |
| Msa0643320 | Msa1082250 | 0.809510 | 1.826320e-50 | -8.615850e-47 |
| Msa0672550 | Msa1082250 | 0.811517 | 6.728883e-51 | -8.615850e-47 |
| Msa0683140 | Msa1082250 | 0.824366 | 8.391554e-54 | -8.615850e-47 |
| Msa0685140 | Msa1082250 | 0.823053 | 1.703772e-53 | -8.615850e-47 |
| Msa0702370 | Msa1082250 | 0.827653 | 1.388892e-54 | -8.615850e-47 |
| Msa0702550 | Msa1082250 | 0.820367 | 7.119492e-53 | -8.615850e-47 |
| Msa0763330 | Msa1082250 | 0.802899 | 4.507115e-49 | -8.615850e-47 |
| Msa0765180 | Msa1082250 | 0.812299 | 4.545656e-51 | -8.615850e-47 |
| Msa0388700 | Msa1082250 | 0.813819 | 2.110449e-51 | -8.615850e-47 |
| Msa0397540 | Msa1082250 | 0.817995 | 2.469503e-52 | -8.615850e-47 |
| Msa0409090 | Msa1082250 | 0.805734 | 1.157106e-49 | -8.615850e-47 |
| Msa0412840 | Msa1082250 | 0.805886 | 1.074866e-49 | -8.615850e-47 |
| Msa0427580 | Msa1082250 | 0.814881 | 1.228984e-51 | -8.615850e-47 |
| Msa0457510 | Msa1082250 | 0.802709 | 4.933684e-49 | -8.615850e-47 |
| Msa0481030 | Msa1082250 | 0.822980 | 1.772165e-53 | -8.615850e-47 |
| Msa0481280 | Msa1082250 | 0.829681 | 4.492530e-55 | -8.615850e-47 |
| Msa0482130 | Msa1082250 | 0.826078 | 3.305300e-54 | -8.615850e-47 |
| Msa0987370 | Msa1082250 | 0.875896 | 2.146814e-68 | -8.615850e-47 |
| Msa0994370 | Msa1082250 | 0.814648 | 1.384200e-51 | -8.615850e-47 |
| Msa1014730 | Msa1082250 | 0.810399 | 1.175313e-50 | -8.615850e-47 |
| Msa1082250 | Msa1088290 | 0.801671 | 8.066907e-49 | -8.615850e-47 |
| Msa1082250 | Msa1090030 | 0.807658 | 4.539604e-50 | -8.615850e-47 |
| Msa1082250 | Msa1144040 | 0.824861 | 6.415977e-54 | -8.615850e-47 |
| Msa1082250 | Msa1160590 | 0.830772 | 2.433307e-55 | -8.615850e-47 |
| Msa1082250 | Msa1181250 | 0.847252 | 1.301072e-59 | -8.615850e-47 |
| Msa1082250 | Msa1181330 | 0.854763 | 9.909839e-62 | -8.615850e-47 |
| Msa1082250 | Msa1208380 | 0.806249 | 9.016330e-50 | -8.615850e-47 |
| Msa1082250 | Msa1224810 | 0.808064 | 3.721375e-50 | -8.615850e-47 |
| Msa1082250 | Msa1270660 | 0.807533 | 4.826428e-50 | -8.615850e-47 |
| Msa1082250 | Msa1362090 | 0.826860 | 2.151472e-54 | -8.615850e-47 |
| Msa1082250 | Msa1400220 | 0.815220 | 1.033371e-51 | -8.615850e-47 |
| Msa1082250 | Msa1403340 | 0.804243 | 2.372417e-49 | -8.615850e-47 |
| Msa1082250 | Msa1411750 | 0.803366 | 3.607727e-49 | -8.615850e-47 |
| Msa1082250 | Msa1419870 | 0.819782 | 9.695324e-53 | -8.615850e-47 |
| Msa0279240 | Msa1082250 | 0.804374 | 2.227700e-49 | -8.615850e-47 |
| Msa0300150 | Msa1082250 | 0.808526 | 2.965966e-50 | -8.615850e-47 |
| Msa0326750 | Msa1082250 | 0.829598 | 4.706655e-55 | -8.615850e-47 |
| Msa0489410 | Msa1082250 | 0.808501 | 3.002629e-50 | -8.615850e-47 |
| Msa0500470 | Msa1082250 | 0.811925 | 5.484865e-51 | -8.615850e-47 |
| Msa0502090 | Msa1082250 | 0.816726 | 4.765667e-52 | -8.615850e-47 |
| Msa0510840 | Msa1082250 | 0.808176 | 3.522346e-50 | -8.615850e-47 |
| Msa0518170 | Msa1082250 | 0.812653 | 3.804109e-51 | -8.615850e-47 |
| Msa0530290 | Msa1082250 | 0.818558 | 1.841518e-52 | -8.615850e-47 |
| Msa0542090 | Msa1082250 | 0.835190 | 1.938344e-56 | -8.615850e-47 |
| Msa0542130 | Msa1082250 | 0.833495 | 5.161931e-56 | -8.615850e-47 |
| Msa0867120 | Msa1082250 | 0.858305 | 9.026367e-63 | -8.615850e-47 |
| Msa0909110 | Msa1082250 | 0.815599 | 8.511761e-52 | -8.615850e-47 |
| Msa0937150 | Msa1082250 | 0.842014 | 3.349205e-58 | -8.615850e-47 |
| Msa0945440 | Msa1082250 | 0.820929 | 5.289392e-53 | -8.615850e-47 |
| Msa0958920 | Msa1082250 | 0.807025 | 6.183537e-50 | -8.615850e-47 |
| Msa0970530 | Msa1082250 | 0.804123 | 2.512428e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082250 | MtrunA17_Chr7g0269781 | 96.636 | 327 | 11 | 0 | 1 | 327 | 1 | 327 | 0.0 | 658 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082250 | AT1G01350.1 | 69.688 | 320 | 94 | 2 | 8 | 327 | 20 | 336 | 4.80e-164 | 461 |
| Msa1082250 | AT5G06420.1 | 68.438 | 320 | 95 | 2 | 8 | 327 | 58 | 371 | 6.60e-162 | 457 |
| Msa1082250 | AT5G06420.2 | 68.438 | 320 | 95 | 2 | 8 | 327 | 58 | 371 | 6.60e-162 | 457 |
| Msa1082250 | AT4G01023.1 | 64.407 | 59 | 21 | 0 | 258 | 316 | 76 | 134 | 2.48e-26 | 104 |
| Msa1082250 | AT4G01023.3 | 65.079 | 63 | 21 | 1 | 254 | 316 | 92 | 153 | 6.56e-26 | 103 |
| Msa1082250 | AT4G01023.2 | 64.407 | 59 | 21 | 0 | 258 | 316 | 95 | 153 | 8.42e-26 | 103 |
Find 82 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCACTACAAGATATATTT+TGG | 0.081156 | 7_2:-82310022 | None:intergenic |
| CAATGACTATGTTTGCTTCT+TGG | 0.240264 | 7_2:+82309869 | Msa1082250:three_prime_UTR |
| CTCATATTCTTCCTATTAAC+AGG | 0.250339 | 7_2:-82308811 | None:intergenic |
| TTGAGTTGAAAACATATCTT+AGG | 0.269766 | 7_2:+82309952 | Msa1082250:three_prime_UTR |
| TCTTCAGAAAACCTGTTAAT+AGG | 0.277151 | 7_2:+82308800 | Msa1082250:CDS |
| TTGTAATCCTTGCATATATC+TGG | 0.290645 | 7_2:-82309318 | None:intergenic |
| GTGGGTCACACGGTCCTCTC+AGG | 0.313412 | 7_2:+82309253 | Msa1082250:CDS |
| GATCGAGGTGATTACAAATC+TGG | 0.331028 | 7_2:+82309387 | Msa1082250:CDS |
| TCTTTGAAATCTAGAATAGA+AGG | 0.333536 | 7_2:-82306744 | None:intergenic |
| TGCAAGGATTACAAGGAAAC+TGG | 0.409524 | 7_2:+82309327 | Msa1082250:CDS |
| AAATGAAAGCTGGGTTTCTC+AGG | 0.415855 | 7_2:-82308988 | None:intergenic |
| CATTTGTCGAAACCCATTTG+TGG | 0.418726 | 7_2:+82309548 | Msa1082250:CDS |
| CTTGCTTAAGAGCTCTTTCA+CGG | 0.431115 | 7_2:-82309104 | None:intergenic |
| CTGTGAGCATTGTGCATTGA+AGG | 0.436410 | 7_2:+82309602 | Msa1082250:CDS |
| TAGCAAAGCAACAGCAACTT+TGG | 0.436558 | 7_2:+82309044 | Msa1082250:CDS |
| GTTGAGACAGGATCCACAAA+TGG | 0.441292 | 7_2:-82309561 | None:intergenic |
| CTGTCTTGCTTAGAGAAGAA+TGG | 0.441799 | 7_2:-82306718 | None:intergenic |
| AGAAGACTCGAAATGAAAGC+TGG | 0.441893 | 7_2:-82308998 | None:intergenic |
| AAGAGGAAGAAAGTTGCAAA+GGG | 0.442815 | 7_2:-82306652 | None:intergenic |
| ACACGGTCCTCTCAGGGCTT+CGG | 0.450938 | 7_2:+82309260 | Msa1082250:CDS |
| TGCTTACACTTGGTTGAGAC+AGG | 0.460245 | 7_2:-82309573 | None:intergenic |
| TGACTATGTTTGCTTCTTGG+AGG | 0.467406 | 7_2:+82309872 | Msa1082250:three_prime_UTR |
| CAATAATTATACAGATCATA+AGG | 0.469416 | 7_2:+82309188 | Msa1082250:CDS |
| GGTGGCAGATGGAGAAAGAA+TGG | 0.469953 | 7_2:+82309409 | Msa1082250:CDS |
| TGCAGGTGAGGATGCGGAAG+AGG | 0.471533 | 7_2:+82309467 | Msa1082250:CDS |
| CGAGGATGTAAAATTATACA+AGG | 0.486690 | 7_2:+82309161 | Msa1082250:CDS |
| ACATACCTTGTTCAGTCGGC+TGG | 0.489348 | 7_2:-82308662 | None:intergenic |
| TGTTTGAAATAGCATGTTTG+TGG | 0.489799 | 7_2:+82310055 | Msa1082250:three_prime_UTR |
| GCAAACAATTGCCAGTGAAA+AGG | 0.499122 | 7_2:+82309227 | Msa1082250:CDS |
| CGACAAATGAAACACGCAAA+TGG | 0.499537 | 7_2:-82309534 | None:intergenic |
| AAAGAGGAAGAAAGTTGCAA+AGG | 0.506039 | 7_2:-82306653 | None:intergenic |
| GAAAGCAAGGAAGATGAGAT+TGG | 0.507679 | 7_2:+82309443 | Msa1082250:CDS |
| TGCAGAGCTCTTCGAAGAGC+CGG | 0.511210 | 7_2:-82308944 | None:intergenic |
| TTGGAAGAGCAGAGAAGAAG+AGG | 0.520007 | 7_2:-82306692 | None:intergenic |
| AATTATACAGATCATAAGGC+TGG | 0.520545 | 7_2:+82309192 | Msa1082250:CDS |
| ATCGAGGTGATTACAAATCT+GGG | 0.520829 | 7_2:+82309388 | Msa1082250:CDS |
| GAGCTCTTTCACGGATGGCA+CGG | 0.524231 | 7_2:-82309095 | None:intergenic |
| TTGAGACAGGATCCACAAAT+GGG | 0.525917 | 7_2:-82309560 | None:intergenic |
| AGATATATGCAAGGATTACA+AGG | 0.530308 | 7_2:+82309320 | Msa1082250:CDS |
| TGGGTCACACGGTCCTCTCA+GGG | 0.532282 | 7_2:+82309254 | Msa1082250:CDS |
| CTTAAGAGCTCTTTCACGGA+TGG | 0.538525 | 7_2:-82309100 | None:intergenic |
| AGTCTCAAGGGAAAGAGTAC+TGG | 0.538575 | 7_2:+82309135 | Msa1082250:CDS |
| CTTTGAAATCTAGAATAGAA+GGG | 0.545513 | 7_2:-82306743 | None:intergenic |
| CATATCTTAGGTTTGCGCAC+AGG | 0.547075 | 7_2:+82309964 | Msa1082250:three_prime_UTR |
| GAAAACCAGCCGACTGAACA+AGG | 0.548242 | 7_2:+82308657 | Msa1082250:CDS |
| GTGGCAGATGGAGAAAGAAT+GGG | 0.553122 | 7_2:+82309410 | Msa1082250:CDS |
| TTACAAATCTGGGTGGCAGA+TGG | 0.553483 | 7_2:+82309398 | Msa1082250:CDS |
| GAAGACTCGAAATGAAAGCT+GGG | 0.554193 | 7_2:-82308997 | None:intergenic |
| AGCTCTTTCACGGATGGCAC+GGG | 0.560125 | 7_2:-82309094 | None:intergenic |
| GAAACTGGTTACTGTGGGTA+TGG | 0.560524 | 7_2:+82309342 | Msa1082250:CDS |
| TATTGAGAATGAAGATAATG+AGG | 0.560776 | 7_2:+82308843 | Msa1082250:CDS |
| TCATGAGATACGAAAGAAGA+TGG | 0.563924 | 7_2:+82309808 | Msa1082250:CDS |
| ATAGGAAGAATATGAGGAAG+CGG | 0.564756 | 7_2:+82308818 | Msa1082250:CDS |
| GGTGAGGATGCGGAAGAGGA+AGG | 0.573050 | 7_2:+82309471 | Msa1082250:CDS |
| AAATGACAGAACAAAAGAGA+GGG | 0.580612 | 7_2:-82309902 | None:intergenic |
| CTGTTAATAGGAAGAATATG+AGG | 0.583376 | 7_2:+82308812 | Msa1082250:CDS |
| GGGATGAAGCTGAGAAAGCA+AGG | 0.584805 | 7_2:+82309430 | Msa1082250:CDS |
| TCCCAAAATATATCTTGTAG+TGG | 0.585918 | 7_2:+82310020 | Msa1082250:three_prime_UTR |
| TACAAGGAAACTGGTTACTG+TGG | 0.587264 | 7_2:+82309336 | Msa1082250:CDS |
| ACAATTGCCAGTGAAAAGGC+TGG | 0.588175 | 7_2:+82309231 | Msa1082250:CDS |
| TTATACATACCTTGTTCAGT+CGG | 0.588673 | 7_2:-82308666 | None:intergenic |
| AAGAAAATTCGAAGCAAGCA+AGG | 0.590196 | 7_2:+82306763 | Msa1082250:five_prime_UTR |
| GATGAGATTGGCTGCAGGTG+AGG | 0.590274 | 7_2:+82309455 | Msa1082250:CDS |
| GAAAAGGCTGGTGGGTCACA+CGG | 0.600903 | 7_2:+82309243 | Msa1082250:CDS |
| AGGAAGATGAGATTGGCTGC+AGG | 0.603143 | 7_2:+82309450 | Msa1082250:CDS |
| ATTGGCTGCAGGTGAGGATG+CGG | 0.603342 | 7_2:+82309461 | Msa1082250:CDS |
| ATTGCCAGTGAAAAGGCTGG+TGG | 0.607353 | 7_2:+82309234 | Msa1082250:CDS |
| AAAATGACAGAACAAAAGAG+AGG | 0.617311 | 7_2:-82309903 | None:intergenic |
| GATACGAAAGAAGATGGCTG+AGG | 0.623889 | 7_2:+82309814 | Msa1082250:CDS |
| TTGCCAGTGAAAAGGCTGGT+GGG | 0.630138 | 7_2:+82309235 | Msa1082250:CDS |
| CAAGCGACTGAGAGTCTCAA+GGG | 0.630489 | 7_2:+82309123 | Msa1082250:CDS |
| ACAGAAGTAGTGCTTACACT+TGG | 0.630927 | 7_2:-82309583 | None:intergenic |
| GCAAGCGACTGAGAGTCTCA+AGG | 0.636269 | 7_2:+82309122 | Msa1082250:CDS |
| GGGAAAGAGTACTGGTTCCG+AGG | 0.640397 | 7_2:+82309143 | Msa1082250:CDS |
| ACAAGGAAACTGGTTACTGT+GGG | 0.647981 | 7_2:+82309337 | Msa1082250:CDS |
| TGTAAGTTTATGCATGATCG+AGG | 0.650874 | 7_2:+82309372 | Msa1082250:CDS |
| TTATCAGCCAGATATATGCA+AGG | 0.656472 | 7_2:+82309311 | Msa1082250:CDS |
| AATGACAGAACAAAAGAGAG+GGG | 0.684921 | 7_2:-82309901 | None:intergenic |
| AGAGCTCTTCGAAGAGCCGG+TGG | 0.686462 | 7_2:-82308941 | None:intergenic |
| GAGGATGTAAAATTATACAA+GGG | 0.688297 | 7_2:+82309162 | Msa1082250:CDS |
| ATGTGAGCCGAAGCCCTGAG+AGG | 0.689295 | 7_2:-82309267 | None:intergenic |
| GAGGTGATTACAAATCTGGG+TGG | 0.758440 | 7_2:+82309391 | Msa1082250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTCTTTTTATATGATTTT+TGG | + | chr7_2:82308152-82308171 | Msa1082250:intron | 10.0% |
| !! | ATAGTATAAATAATAATGTA+GGG | - | chr7_2:82308532-82308551 | None:intergenic | 10.0% |
| !! | TATAGTATAAATAATAATGT+AGG | - | chr7_2:82308533-82308552 | None:intergenic | 10.0% |
| !!! | AAGAATAATTTTGTTATCTT+GGG | - | chr7_2:82306615-82306634 | None:intergenic | 15.0% |
| !!! | AAAGAATAATTTTGTTATCT+TGG | - | chr7_2:82306616-82306635 | None:intergenic | 15.0% |
| !!! | AAAATAGAAGACTTATTTTA+AGG | + | chr7_2:82307158-82307177 | Msa1082250:intron | 15.0% |
| !! | TATTATGATAAGTAATAACA+TGG | - | chr7_2:82307212-82307231 | None:intergenic | 15.0% |
| !!! | AAATATATTGATGACATTTA+GGG | - | chr7_2:82308386-82308405 | None:intergenic | 15.0% |
| !!! | ATTGTTCTTTTTTTGTGTTT+GGG | + | chr7_2:82307111-82307130 | Msa1082250:intron | 20.0% |
| !!! | TCTTCTATTTTGCTAAAATA+TGG | - | chr7_2:82307149-82307168 | None:intergenic | 20.0% |
| !! | ATAATAGTAGACTTATTTGA+TGG | + | chr7_2:82307226-82307245 | Msa1082250:intron | 20.0% |
| !! | ACAAATTTCTCATTCATATA+TGG | + | chr7_2:82307287-82307306 | Msa1082250:intron | 20.0% |
| !!! | TGATTTGGTTTAACAATTAT+AGG | + | chr7_2:82307595-82307614 | Msa1082250:intron | 20.0% |
| !! | GATCAAATGTATCATTAATA+TGG | - | chr7_2:82307854-82307873 | None:intergenic | 20.0% |
| !!! | GAAATATATTGATGACATTT+AGG | - | chr7_2:82308387-82308406 | None:intergenic | 20.0% |
| !! | AATGTCATCAATATATTTCT+CGG | + | chr7_2:82308388-82308407 | Msa1082250:intron | 20.0% |
| !!! | AGACTCAAATTGAATTATTT+TGG | - | chr7_2:82308472-82308491 | None:intergenic | 20.0% |
| !!! | TATAGTGTTATTTCTCATAT+TGG | + | chr7_2:82308568-82308587 | Msa1082250:intron | 20.0% |
| !! | AGAAAAAAAAAGGTTAATGA+TGG | - | chr7_2:82308751-82308770 | None:intergenic | 20.0% |
| !! | CAATAATTATACAGATCATA+AGG | + | chr7_2:82309188-82309207 | Msa1082250:CDS | 20.0% |
| !!! | CTTTGAAATCTAGAATAGAA+GGG | - | chr7_2:82306746-82306765 | None:intergenic | 25.0% |
| !!! | TCTTTGAAATCTAGAATAGA+AGG | - | chr7_2:82306747-82306766 | None:intergenic | 25.0% |
| !!! | TCTTATGTTTTTGTTGTTCT+GGG | + | chr7_2:82306809-82306828 | Msa1082250:intron | 25.0% |
| ! | CGAAATCTAAAAACGAATTA+GGG | - | chr7_2:82306837-82306856 | None:intergenic | 25.0% |
| ! | TCGAAATCTAAAAACGAATT+AGG | - | chr7_2:82306838-82306857 | None:intergenic | 25.0% |
| ! | GAAATTAAAACGCAGAAATA+TGG | - | chr7_2:82306922-82306941 | None:intergenic | 25.0% |
| ! | TCTATAAGATGATGATTTCT+GGG | + | chr7_2:82306950-82306969 | Msa1082250:intron | 25.0% |
| !! | TTATTTCGATTTGTTTCGAT+CGG | + | chr7_2:82307017-82307036 | Msa1082250:intron | 25.0% |
| !!! | GATTGTTCTTTTTTTGTGTT+TGG | + | chr7_2:82307110-82307129 | Msa1082250:intron | 25.0% |
| !!! | TTGTTCTTTTTTTGTGTTTG+GGG | + | chr7_2:82307112-82307131 | Msa1082250:intron | 25.0% |
| !!! | AGACTTATTTTAAGGTTTCT+AGG | + | chr7_2:82307166-82307185 | Msa1082250:intron | 25.0% |
| !!! | GATTTTTGAAAGTAGATAAG+AGG | - | chr7_2:82307320-82307339 | None:intergenic | 25.0% |
| ! | GGATTTAATAATACATATCC+TGG | + | chr7_2:82307426-82307445 | Msa1082250:intron | 25.0% |
| ! | AATAATACATATCCTGGATA+AGG | + | chr7_2:82307432-82307451 | Msa1082250:intron | 25.0% |
| ! | TTAACAATTATAGGACATGT+TGG | + | chr7_2:82307604-82307623 | Msa1082250:intron | 25.0% |
| !! | AACATCCCTTACATTAATTT+TGG | + | chr7_2:82307655-82307674 | Msa1082250:intron | 25.0% |
| ! | CTCAACCAAAATTAATGTAA+GGG | - | chr7_2:82307663-82307682 | None:intergenic | 25.0% |
| !!! | CTTACATTAATTTTGGTTGA+GGG | + | chr7_2:82307662-82307681 | Msa1082250:intron | 25.0% |
| ! | TAATGATACATTTGATCATC+TGG | + | chr7_2:82307857-82307876 | Msa1082250:intron | 25.0% |
| ! | TACTGTCATACTATCAAAAT+GGG | - | chr7_2:82307884-82307903 | None:intergenic | 25.0% |
| ! | TTACTGTCATACTATCAAAA+TGG | - | chr7_2:82307885-82307904 | None:intergenic | 25.0% |
| !! | TTTGATAGTATGACAGTAAT+TGG | + | chr7_2:82307886-82307905 | Msa1082250:intron | 25.0% |
| !! | TTGATAGTATGACAGTAATT+GGG | + | chr7_2:82307887-82307906 | Msa1082250:intron | 25.0% |
| !!! | GATAGACCATTTTTTGTTTA+AGG | + | chr7_2:82308102-82308121 | Msa1082250:intron | 25.0% |
| ! | TGCATTATAAATCTGTTTGA+TGG | + | chr7_2:82308336-82308355 | Msa1082250:intron | 25.0% |
| ! | CATGAAGAGAAAAATTTACT+CGG | - | chr7_2:82308439-82308458 | None:intergenic | 25.0% |
| ! | TTCAATTTGAGTCTGAATTT+CGG | + | chr7_2:82308478-82308497 | Msa1082250:intron | 25.0% |
| !! | TCTCATATTGGTAATTGATT+TGG | + | chr7_2:82308580-82308599 | Msa1082250:intron | 25.0% |
| !! | TTTTACTATGGAAAATTCTG+AGG | + | chr7_2:82308623-82308642 | Msa1082250:exon | 25.0% |
| ! | TATTGAGAATGAAGATAATG+AGG | + | chr7_2:82308843-82308862 | Msa1082250:CDS | 25.0% |
| !! | CTTGTATAATTTTACATCCT+CGG | - | chr7_2:82309163-82309182 | None:intergenic | 25.0% |
| ! | GAGGATGTAAAATTATACAA+GGG | + | chr7_2:82309162-82309181 | Msa1082250:CDS | 25.0% |
| !!! | CTTATTTGCTTTGAAGTTAA+GGG | - | chr7_2:82309632-82309651 | None:intergenic | 25.0% |
| !!! | ACTTATTTGCTTTGAAGTTA+AGG | - | chr7_2:82309633-82309652 | None:intergenic | 25.0% |
| ! | AGAAGTTAGGCATAATTAAA+AGG | - | chr7_2:82309706-82309725 | None:intergenic | 25.0% |
| !!! | TGTCATTTTTAACTGTCAAA+TGG | + | chr7_2:82309917-82309936 | Msa1082250:three_prime_UTR | 25.0% |
| !!! | TTGAGTTGAAAACATATCTT+AGG | + | chr7_2:82309952-82309971 | Msa1082250:three_prime_UTR | 25.0% |
| !! | TCCACTACAAGATATATTTT+GGG | - | chr7_2:82310024-82310043 | None:intergenic | 25.0% |
| !! | TTCCACTACAAGATATATTT+TGG | - | chr7_2:82310025-82310044 | None:intergenic | 25.0% |
| !!! | CTCTTATGTTTTTGTTGTTC+TGG | + | chr7_2:82306808-82306827 | Msa1082250:intron | 30.0% |
| CTCTATAAGATGATGATTTC+TGG | + | chr7_2:82306949-82306968 | Msa1082250:intron | 30.0% | |
| ! | TATTTCGATTTGTTTCGATC+GGG | + | chr7_2:82307018-82307037 | Msa1082250:intron | 30.0% |
| ! | TTGTTGCTGTTCTTATCTAT+AGG | + | chr7_2:82307059-82307078 | Msa1082250:intron | 30.0% |
| CAAATAGGATGGCTATTATT+TGG | - | chr7_2:82307254-82307273 | None:intergenic | 30.0% | |
| CAAATAATAGCCATCCTATT+TGG | + | chr7_2:82307252-82307271 | Msa1082250:intron | 30.0% | |
| CAAAGTCTTCTTAAATACCA+TGG | + | chr7_2:82307350-82307369 | Msa1082250:intron | 30.0% | |
| ! | TTTTCCACTATGAATTTAGC+AGG | + | chr7_2:82307405-82307424 | Msa1082250:intron | 30.0% |
| AAATCCTGCTAAATTCATAG+TGG | - | chr7_2:82307412-82307431 | None:intergenic | 30.0% | |
| CAAATCATCATAGATAACCA+AGG | - | chr7_2:82307582-82307601 | None:intergenic | 30.0% | |
| CTTGGTTATCTATGATGATT+TGG | + | chr7_2:82307580-82307599 | Msa1082250:intron | 30.0% | |
| CCTCAACCAAAATTAATGTA+AGG | - | chr7_2:82307664-82307683 | None:intergenic | 30.0% | |
| !!! | CCTTACATTAATTTTGGTTG+AGG | + | chr7_2:82307661-82307680 | Msa1082250:intron | 30.0% |
| CTAGCTTATATCACCTAAAA+TGG | - | chr7_2:82307690-82307709 | None:intergenic | 30.0% | |
| ACTGTCATACTATCAAAATG+GGG | - | chr7_2:82307883-82307902 | None:intergenic | 30.0% | |
| TTGTATCACAAAAATCGAAC+TGG | + | chr7_2:82307985-82308004 | Msa1082250:intron | 30.0% | |
| GGCATATAATTCTTCCATAT+TGG | + | chr7_2:82308006-82308025 | Msa1082250:intron | 30.0% | |
| !! | GTGTTTCTACCATTATTTTG+TGG | + | chr7_2:82308062-82308081 | Msa1082250:intron | 30.0% |
| AAAATGGTCTATCCATTGAA+AGG | - | chr7_2:82308095-82308114 | None:intergenic | 30.0% | |
| CAGAGACCTTAAACAAAAAA+TGG | - | chr7_2:82308111-82308130 | None:intergenic | 30.0% | |
| CAAACATTAAGTACAAGTTC+AGG | - | chr7_2:82308313-82308332 | None:intergenic | 30.0% | |
| TCAATTTGAGTCTGAATTTC+GGG | + | chr7_2:82308479-82308498 | Msa1082250:intron | 30.0% | |
| !! | TGAATTTCGGGTTTAGTTAT+TGG | + | chr7_2:82308491-82308510 | Msa1082250:intron | 30.0% |
| TTATACATACCTTGTTCAGT+CGG | - | chr7_2:82308669-82308688 | None:intergenic | 30.0% | |
| GATGGTACAAAAAAATGTAG+AGG | - | chr7_2:82308733-82308752 | None:intergenic | 30.0% | |
| ACAAACGCGTAGAAAAAAAA+AGG | - | chr7_2:82308761-82308780 | None:intergenic | 30.0% | |
| TCTTCAGAAAACCTGTTAAT+AGG | + | chr7_2:82308800-82308819 | Msa1082250:CDS | 30.0% | |
| CTCATATTCTTCCTATTAAC+AGG | - | chr7_2:82308814-82308833 | None:intergenic | 30.0% | |
| CTGTTAATAGGAAGAATATG+AGG | + | chr7_2:82308812-82308831 | Msa1082250:CDS | 30.0% | |
| TGTTCAGAAAAAGAACATGA+AGG | + | chr7_2:82308897-82308916 | Msa1082250:CDS | 30.0% | |
| ! | AATAAGTTGTTCTTTTCCAC+CGG | + | chr7_2:82308925-82308944 | Msa1082250:CDS | 30.0% |
| CGAGGATGTAAAATTATACA+AGG | + | chr7_2:82309161-82309180 | Msa1082250:CDS | 30.0% | |
| AATTATACAGATCATAAGGC+TGG | + | chr7_2:82309192-82309211 | Msa1082250:CDS | 30.0% | |
| TTGTAATCCTTGCATATATC+TGG | - | chr7_2:82309321-82309340 | None:intergenic | 30.0% | |
| AGATATATGCAAGGATTACA+AGG | + | chr7_2:82309320-82309339 | Msa1082250:CDS | 30.0% | |
| AAGTAAAATGAGCAGAAGTT+AGG | - | chr7_2:82309719-82309738 | None:intergenic | 30.0% | |
| AAATGACAGAACAAAAGAGA+GGG | - | chr7_2:82309905-82309924 | None:intergenic | 30.0% | |
| AAAATGACAGAACAAAAGAG+AGG | - | chr7_2:82309906-82309925 | None:intergenic | 30.0% | |
| TCCCAAAATATATCTTGTAG+TGG | + | chr7_2:82310020-82310039 | Msa1082250:three_prime_UTR | 30.0% | |
| ! | TGTTTGAAATAGCATGTTTG+TGG | + | chr7_2:82310055-82310074 | Msa1082250:three_prime_UTR | 30.0% |
| AAGAGGAAGAAAGTTGCAAA+GGG | - | chr7_2:82306655-82306674 | None:intergenic | 35.0% | |
| AAAGAGGAAGAAAGTTGCAA+AGG | - | chr7_2:82306656-82306675 | None:intergenic | 35.0% | |
| ! | GCTTAGAGAAGAATGGTTTT+TGG | - | chr7_2:82306714-82306733 | None:intergenic | 35.0% |
| AAGAAAATTCGAAGCAAGCA+AGG | + | chr7_2:82306763-82306782 | Msa1082250:five_prime_UTR | 35.0% | |
| AACAAACCCAGAAATCGAAT+TGG | - | chr7_2:82307044-82307063 | None:intergenic | 35.0% | |
| CTTCTTAAATACCATGGAAG+TGG | + | chr7_2:82307356-82307375 | Msa1082250:intron | 35.0% | |
| !! | TCTTGTTATTACCACTTCCA+TGG | - | chr7_2:82307370-82307389 | None:intergenic | 35.0% |
| GTCAATTCCACTAGAAATTG+AGG | + | chr7_2:82307466-82307485 | Msa1082250:intron | 35.0% | |
| TGAGCATAATTCTCAAGACA+CGG | + | chr7_2:82307549-82307568 | Msa1082250:intron | 35.0% | |
| TGATATAAGCTAGCTAGCAA+TGG | + | chr7_2:82307697-82307716 | Msa1082250:intron | 35.0% | |
| GGCTCAATCTAGACTAATAA+AGG | - | chr7_2:82307728-82307747 | None:intergenic | 35.0% | |
| AAGTTCCATAGAACCAAAGT+CGG | - | chr7_2:82308037-82308056 | None:intergenic | 35.0% | |
| ! | ATCGTGACAGCTTTTTACTA+TGG | + | chr7_2:82308611-82308630 | Msa1082250:intron | 35.0% |
| ATAGGAAGAATATGAGGAAG+CGG | + | chr7_2:82308818-82308837 | Msa1082250:CDS | 35.0% | |
| TTATCAGCCAGATATATGCA+AGG | + | chr7_2:82309311-82309330 | Msa1082250:CDS | 35.0% | |
| TGTAAGTTTATGCATGATCG+AGG | + | chr7_2:82309372-82309391 | Msa1082250:CDS | 35.0% | |
| ATCGAGGTGATTACAAATCT+GGG | + | chr7_2:82309388-82309407 | Msa1082250:CDS | 35.0% | |
| ! | TACGCTTGGCATTTTTAATG+CGG | + | chr7_2:82309784-82309803 | Msa1082250:CDS | 35.0% |
| TCATGAGATACGAAAGAAGA+TGG | + | chr7_2:82309808-82309827 | Msa1082250:CDS | 35.0% | |
| CAATGACTATGTTTGCTTCT+TGG | + | chr7_2:82309869-82309888 | Msa1082250:three_prime_UTR | 35.0% | |
| AATGACAGAACAAAAGAGAG+GGG | - | chr7_2:82309904-82309923 | None:intergenic | 35.0% | |
| !!! | CGTTTTCTGGGTTTTGAAAG+AGG | - | chr7_2:82306672-82306691 | None:intergenic | 40.0% |
| CTGTCTTGCTTAGAGAAGAA+TGG | - | chr7_2:82306721-82306740 | None:intergenic | 40.0% | |
| !! | ACTGTGTTTGTTGCGTTTTC+TGG | + | chr7_2:82306868-82306887 | Msa1082250:intron | 40.0% |
| !!! | TTTTTTGTGTTTGGGGATGC+TGG | + | chr7_2:82307119-82307138 | Msa1082250:intron | 40.0% |
| ACAGAGATGTCCAAATAGGA+TGG | - | chr7_2:82307265-82307284 | None:intergenic | 40.0% | |
| GTTCACAGAGATGTCCAAAT+AGG | - | chr7_2:82307269-82307288 | None:intergenic | 40.0% | |
| ! | TTGGTTGAGGGAACCATTTT+AGG | + | chr7_2:82307674-82307693 | Msa1082250:intron | 40.0% |
| TGTTAGAGCAATGGAACTCA+AGG | - | chr7_2:82307749-82307768 | None:intergenic | 40.0% | |
| TTCCATTGCTCTAACATTGC+AGG | + | chr7_2:82307753-82307772 | Msa1082250:intron | 40.0% | |
| TCCATTGCTCTAACATTGCA+GGG | + | chr7_2:82307754-82307773 | Msa1082250:intron | 40.0% | |
| TGTGTTGTCTTGCTACAGTT+AGG | + | chr7_2:82308207-82308226 | Msa1082250:intron | 40.0% | |
| CGGTGACATGACAAAGAATA+TGG | - | chr7_2:82308419-82308438 | None:intergenic | 40.0% | |
| AAATGAAAGCTGGGTTTCTC+AGG | - | chr7_2:82308991-82309010 | None:intergenic | 40.0% | |
| GAAGACTCGAAATGAAAGCT+GGG | - | chr7_2:82309000-82309019 | None:intergenic | 40.0% | |
| AGAAGACTCGAAATGAAAGC+TGG | - | chr7_2:82309001-82309020 | None:intergenic | 40.0% | |
| TAGCAAAGCAACAGCAACTT+TGG | + | chr7_2:82309044-82309063 | Msa1082250:CDS | 40.0% | |
| CTTGCTTAAGAGCTCTTTCA+CGG | - | chr7_2:82309107-82309126 | None:intergenic | 40.0% | |
| GCAAACAATTGCCAGTGAAA+AGG | + | chr7_2:82309227-82309246 | Msa1082250:CDS | 40.0% | |
| TGCAAGGATTACAAGGAAAC+TGG | + | chr7_2:82309327-82309346 | Msa1082250:CDS | 40.0% | |
| TACAAGGAAACTGGTTACTG+TGG | + | chr7_2:82309336-82309355 | Msa1082250:CDS | 40.0% | |
| ACAAGGAAACTGGTTACTGT+GGG | + | chr7_2:82309337-82309356 | Msa1082250:CDS | 40.0% | |
| GATCGAGGTGATTACAAATC+TGG | + | chr7_2:82309387-82309406 | Msa1082250:CDS | 40.0% | |
| GAAAGCAAGGAAGATGAGAT+TGG | + | chr7_2:82309443-82309462 | Msa1082250:CDS | 40.0% | |
| CGACAAATGAAACACGCAAA+TGG | - | chr7_2:82309537-82309556 | None:intergenic | 40.0% | |
| CATTTGTCGAAACCCATTTG+TGG | + | chr7_2:82309548-82309567 | Msa1082250:CDS | 40.0% | |
| TTGAGACAGGATCCACAAAT+GGG | - | chr7_2:82309563-82309582 | None:intergenic | 40.0% | |
| ACAGAAGTAGTGCTTACACT+TGG | - | chr7_2:82309586-82309605 | None:intergenic | 40.0% | |
| GCATTAAAAATGCCAAGCGT+AGG | - | chr7_2:82309785-82309804 | None:intergenic | 40.0% | |
| TGACTATGTTTGCTTCTTGG+AGG | + | chr7_2:82309872-82309891 | Msa1082250:three_prime_UTR | 40.0% | |
| !!! | GAGAAGAAGAGGCGTTTTCT+GGG | - | chr7_2:82306684-82306703 | None:intergenic | 45.0% |
| !!! | AGAGAAGAAGAGGCGTTTTC+TGG | - | chr7_2:82306685-82306704 | None:intergenic | 45.0% |
| TTGGAAGAGCAGAGAAGAAG+AGG | - | chr7_2:82306695-82306714 | None:intergenic | 45.0% | |
| ! | GTTTGTTGCGTGCAGAACAT+AGG | + | chr7_2:82306972-82306991 | Msa1082250:intron | 45.0% |
| ATCGGGCCAATTCGATTTCT+GGG | + | chr7_2:82307035-82307054 | Msa1082250:intron | 45.0% | |
| CAACTTATGCTGCCTTATCC+AGG | - | chr7_2:82307447-82307466 | None:intergenic | 45.0% | |
| ! | CTGCATGCCTCAATTTCTAG+TGG | - | chr7_2:82307476-82307495 | None:intergenic | 45.0% |
| CAAGACACGGTTGTTAACCT+TGG | + | chr7_2:82307562-82307581 | Msa1082250:intron | 45.0% | |
| !! | AGGACATGTTGGTCTGCTTT+TGG | + | chr7_2:82307615-82307634 | Msa1082250:intron | 45.0% |
| ACCCTGCAATGTTAGAGCAA+TGG | - | chr7_2:82307758-82307777 | None:intergenic | 45.0% | |
| ACTCTGTTCCAGATCCTACA+CGG | + | chr7_2:82307954-82307973 | Msa1082250:intron | 45.0% | |
| ATACAATGACCGATCCGTGT+AGG | - | chr7_2:82307971-82307990 | None:intergenic | 45.0% | |
| CAAAGTCGGCGAAACCAATA+TGG | - | chr7_2:82308023-82308042 | None:intergenic | 45.0% | |
| !! | CATATTGGTTTCGCCGACTT+TGG | + | chr7_2:82308021-82308040 | Msa1082250:intron | 45.0% |
| !! | TTTCGCCGACTTTGGTTCTA+TGG | + | chr7_2:82308029-82308048 | Msa1082250:intron | 45.0% |
| GGCGCAAGACCACAAAATAA+TGG | - | chr7_2:82308074-82308093 | None:intergenic | 45.0% | |
| CTTAAGAGCTCTTTCACGGA+TGG | - | chr7_2:82309103-82309122 | None:intergenic | 45.0% | |
| ! | AGTCTCAAGGGAAAGAGTAC+TGG | + | chr7_2:82309135-82309154 | Msa1082250:CDS | 45.0% |
| ACAATTGCCAGTGAAAAGGC+TGG | + | chr7_2:82309231-82309250 | Msa1082250:CDS | 45.0% | |
| GAAACTGGTTACTGTGGGTA+TGG | + | chr7_2:82309342-82309361 | Msa1082250:CDS | 45.0% | |
| GAGGTGATTACAAATCTGGG+TGG | + | chr7_2:82309391-82309410 | Msa1082250:CDS | 45.0% | |
| TTACAAATCTGGGTGGCAGA+TGG | + | chr7_2:82309398-82309417 | Msa1082250:CDS | 45.0% | |
| GTGGCAGATGGAGAAAGAAT+GGG | + | chr7_2:82309410-82309429 | Msa1082250:CDS | 45.0% | |
| GTTGAGACAGGATCCACAAA+TGG | - | chr7_2:82309564-82309583 | None:intergenic | 45.0% | |
| TGCTTACACTTGGTTGAGAC+AGG | - | chr7_2:82309576-82309595 | None:intergenic | 45.0% | |
| ! | CTGTGAGCATTGTGCATTGA+AGG | + | chr7_2:82309602-82309621 | Msa1082250:CDS | 45.0% |
| GATACGAAAGAAGATGGCTG+AGG | + | chr7_2:82309814-82309833 | Msa1082250:CDS | 45.0% | |
| CATATCTTAGGTTTGCGCAC+AGG | + | chr7_2:82309964-82309983 | Msa1082250:three_prime_UTR | 45.0% | |
| GATCGGGCCAATTCGATTTC+TGG | + | chr7_2:82307034-82307053 | Msa1082250:intron | 50.0% | |
| GTTCCAGATCCTACACGGAT+CGG | + | chr7_2:82307959-82307978 | Msa1082250:intron | 50.0% | |
| ! | TGTGGTCTTGCGCCTTTCAA+TGG | + | chr7_2:82308080-82308099 | Msa1082250:intron | 50.0% |
| !!! | CGGCTGGTTTTCAGCAGATT+TGG | - | chr7_2:82308649-82308668 | None:intergenic | 50.0% |
| GAAAACCAGCCGACTGAACA+AGG | + | chr7_2:82308657-82308676 | Msa1082250:CDS | 50.0% | |
| ACATACCTTGTTCAGTCGGC+TGG | - | chr7_2:82308665-82308684 | None:intergenic | 50.0% | |
| CAAGCGACTGAGAGTCTCAA+GGG | + | chr7_2:82309123-82309142 | Msa1082250:CDS | 50.0% | |
| ATTGCCAGTGAAAAGGCTGG+TGG | + | chr7_2:82309234-82309253 | Msa1082250:CDS | 50.0% | |
| TTGCCAGTGAAAAGGCTGGT+GGG | + | chr7_2:82309235-82309254 | Msa1082250:CDS | 50.0% | |
| GGTGGCAGATGGAGAAAGAA+TGG | + | chr7_2:82309409-82309428 | Msa1082250:CDS | 50.0% | |
| GGGATGAAGCTGAGAAAGCA+AGG | + | chr7_2:82309430-82309449 | Msa1082250:CDS | 50.0% | |
| ! | AGGAAGATGAGATTGGCTGC+AGG | + | chr7_2:82309450-82309469 | Msa1082250:CDS | 50.0% |
| TGACCGATCCGTGTAGGATC+TGG | - | chr7_2:82307965-82307984 | None:intergenic | 55.0% | |
| TGCAGAGCTCTTCGAAGAGC+CGG | - | chr7_2:82308947-82308966 | None:intergenic | 55.0% | |
| AGCTCTTTCACGGATGGCAC+GGG | - | chr7_2:82309097-82309116 | None:intergenic | 55.0% | |
| GAGCTCTTTCACGGATGGCA+CGG | - | chr7_2:82309098-82309117 | None:intergenic | 55.0% | |
| GCAAGCGACTGAGAGTCTCA+AGG | + | chr7_2:82309122-82309141 | Msa1082250:CDS | 55.0% | |
| !! | GGGAAAGAGTACTGGTTCCG+AGG | + | chr7_2:82309143-82309162 | Msa1082250:CDS | 55.0% |
| ! | TGACCCACCAGCCTTTTCAC+TGG | - | chr7_2:82309241-82309260 | None:intergenic | 55.0% |
| ! | GAAAAGGCTGGTGGGTCACA+CGG | + | chr7_2:82309243-82309262 | Msa1082250:CDS | 55.0% |
| ! | GATGAGATTGGCTGCAGGTG+AGG | + | chr7_2:82309455-82309474 | Msa1082250:CDS | 55.0% |
| ATTGGCTGCAGGTGAGGATG+CGG | + | chr7_2:82309461-82309480 | Msa1082250:CDS | 55.0% | |
| GTCTGCAATCAGCCTACGCT+TGG | + | chr7_2:82309770-82309789 | Msa1082250:CDS | 55.0% | |
| AGAGCTCTTCGAAGAGCCGG+TGG | - | chr7_2:82308944-82308963 | None:intergenic | 60.0% | |
| TGGGTCACACGGTCCTCTCA+GGG | + | chr7_2:82309254-82309273 | Msa1082250:CDS | 60.0% | |
| ACACGGTCCTCTCAGGGCTT+CGG | + | chr7_2:82309260-82309279 | Msa1082250:CDS | 60.0% | |
| ATGTGAGCCGAAGCCCTGAG+AGG | - | chr7_2:82309270-82309289 | None:intergenic | 60.0% | |
| TGCAGGTGAGGATGCGGAAG+AGG | + | chr7_2:82309467-82309486 | Msa1082250:CDS | 60.0% | |
| GGTGAGGATGCGGAAGAGGA+AGG | + | chr7_2:82309471-82309490 | Msa1082250:CDS | 60.0% | |
| GTGGGTCACACGGTCCTCTC+AGG | + | chr7_2:82309253-82309272 | Msa1082250:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 82306612 | 82310130 | 82306612 | ID=Msa1082250;Name=Msa1082250 |
| chr7_2 | mRNA | 82306612 | 82310130 | 82306612 | ID=Msa1082250-mRNA-1;Parent=Msa1082250;Name=Msa1082250-mRNA-1;_AED=0.22;_eAED=0.22;_QI=182|1|1|1|0.66|0.75|4|286|327 |
| chr7_2 | exon | 82306612 | 82306784 | 82306612 | ID=Msa1082250-mRNA-1:exon:21304;Parent=Msa1082250-mRNA-1 |
| chr7_2 | exon | 82308621 | 82308678 | 82308621 | ID=Msa1082250-mRNA-1:exon:21305;Parent=Msa1082250-mRNA-1 |
| chr7_2 | exon | 82308791 | 82309623 | 82308791 | ID=Msa1082250-mRNA-1:exon:21306;Parent=Msa1082250-mRNA-1 |
| chr7_2 | exon | 82309743 | 82310130 | 82309743 | ID=Msa1082250-mRNA-1:exon:21307;Parent=Msa1082250-mRNA-1 |
| chr7_2 | five_prime_UTR | 82306612 | 82306784 | 82306612 | ID=Msa1082250-mRNA-1:five_prime_utr;Parent=Msa1082250-mRNA-1 |
| chr7_2 | five_prime_UTR | 82308621 | 82308629 | 82308621 | ID=Msa1082250-mRNA-1:five_prime_utr;Parent=Msa1082250-mRNA-1 |
| chr7_2 | CDS | 82308630 | 82308678 | 82308630 | ID=Msa1082250-mRNA-1:cds;Parent=Msa1082250-mRNA-1 |
| chr7_2 | CDS | 82308791 | 82309623 | 82308791 | ID=Msa1082250-mRNA-1:cds;Parent=Msa1082250-mRNA-1 |
| chr7_2 | CDS | 82309743 | 82309844 | 82309743 | ID=Msa1082250-mRNA-1:cds;Parent=Msa1082250-mRNA-1 |
| chr7_2 | three_prime_UTR | 82309845 | 82310130 | 82309845 | ID=Msa1082250-mRNA-1:three_prime_utr;Parent=Msa1082250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
