Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0867120 | XP_013450398.1 | 96.942 | 327 | 10 | 0 | 1 | 327 | 1 | 327 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0867120 | sp|Q8GX84|C3H1_ARATH | 69.375 | 320 | 95 | 2 | 8 | 327 | 20 | 336 | 3.39e-162 | 459 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0867120 | A0A072U502 | 96.942 | 327 | 10 | 0 | 1 | 327 | 1 | 327 | 0.0 | 661 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0867120 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001520 | Msa0867120 | 0.806046 | 9.947574e-50 | -8.615850e-47 |
| Msa0007850 | Msa0867120 | 0.805015 | 1.637149e-49 | -8.615850e-47 |
| Msa0010490 | Msa0867120 | 0.810491 | 1.122659e-50 | -8.615850e-47 |
| Msa0010500 | Msa0867120 | 0.804432 | 2.166622e-49 | -8.615850e-47 |
| Msa0011960 | Msa0867120 | 0.801029 | 1.092009e-48 | -8.615850e-47 |
| Msa0029260 | Msa0867120 | 0.819728 | 9.974312e-53 | -8.615850e-47 |
| Msa0043660 | Msa0867120 | 0.807163 | 5.779540e-50 | -8.615850e-47 |
| Msa0059950 | Msa0867120 | 0.800581 | 1.347598e-48 | -8.615850e-47 |
| Msa0061630 | Msa0867120 | 0.807255 | 5.527315e-50 | -8.615850e-47 |
| Msa0076780 | Msa0867120 | 0.829862 | 4.059042e-55 | -8.615850e-47 |
| Msa0093960 | Msa0867120 | 0.803491 | 3.399378e-49 | -8.615850e-47 |
| Msa0118540 | Msa0867120 | 0.805495 | 1.298953e-49 | -8.615850e-47 |
| Msa0605000 | Msa0867120 | 0.838223 | 3.267580e-57 | -8.615850e-47 |
| Msa0609000 | Msa0867120 | 0.824223 | 9.069658e-54 | -8.615850e-47 |
| Msa0618930 | Msa0867120 | 0.822420 | 2.391747e-53 | -8.615850e-47 |
| Msa0631350 | Msa0867120 | 0.811907 | 5.534241e-51 | -8.615850e-47 |
| Msa0683140 | Msa0867120 | 0.810119 | 1.350377e-50 | -8.615850e-47 |
| Msa0685140 | Msa0867120 | 0.816847 | 4.478012e-52 | -8.615850e-47 |
| Msa0689440 | Msa0867120 | 0.825783 | 3.882764e-54 | -8.615850e-47 |
| Msa0713350 | Msa0867120 | 0.812090 | 5.049054e-51 | -8.615850e-47 |
| Msa0715650 | Msa0867120 | 0.807514 | 4.871092e-50 | -8.615850e-47 |
| Msa0719420 | Msa0867120 | 0.832466 | 9.305705e-56 | -8.615850e-47 |
| Msa0719610 | Msa0867120 | 0.849978 | 2.284385e-60 | -8.615850e-47 |
| Msa0763330 | Msa0867120 | 0.846673 | 1.873996e-59 | -8.615850e-47 |
| Msa0772480 | Msa0867120 | 0.829737 | 4.354149e-55 | -8.615850e-47 |
| Msa0789680 | Msa0867120 | 0.832680 | 8.234769e-56 | -8.615850e-47 |
| Msa0798440 | Msa0867120 | 0.829074 | 6.308923e-55 | -8.615850e-47 |
| Msa0802410 | Msa0867120 | 0.821319 | 4.300285e-53 | -8.615850e-47 |
| Msa0818750 | Msa0867120 | 0.810428 | 1.158188e-50 | -8.615850e-47 |
| Msa0830540 | Msa0867120 | 0.818977 | 1.478920e-52 | -8.615850e-47 |
| Msa0127040 | Msa0867120 | 0.809085 | 2.252142e-50 | -8.615850e-47 |
| Msa0146770 | Msa0867120 | 0.821978 | 3.028133e-53 | -8.615850e-47 |
| Msa0149440 | Msa0867120 | 0.811993 | 5.300889e-51 | -8.615850e-47 |
| Msa0169300 | Msa0867120 | 0.817459 | 3.261278e-52 | -8.615850e-47 |
| Msa0231660 | Msa0867120 | 0.801394 | 9.191171e-49 | -8.615850e-47 |
| Msa0385490 | Msa0867120 | 0.811631 | 6.357764e-51 | -8.615850e-47 |
| Msa0387910 | Msa0867120 | 0.858539 | 7.685843e-63 | -8.615850e-47 |
| Msa0421260 | Msa0867120 | 0.834274 | 3.294465e-56 | -8.615850e-47 |
| Msa0458640 | Msa0867120 | 0.804625 | 1.974179e-49 | -8.615850e-47 |
| Msa0467220 | Msa0867120 | 0.845545 | 3.798336e-59 | -8.615850e-47 |
| Msa0481030 | Msa0867120 | 0.807923 | 3.987690e-50 | -8.615850e-47 |
| Msa0481280 | Msa0867120 | 0.802057 | 6.718894e-49 | -8.615850e-47 |
| Msa0482130 | Msa0867120 | 0.809676 | 1.682431e-50 | -8.615850e-47 |
| Msa0345390 | Msa0867120 | 0.808450 | 3.078546e-50 | -8.615850e-47 |
| Msa0489410 | Msa0867120 | 0.831687 | 1.449331e-55 | -8.615850e-47 |
| Msa0534900 | Msa0867120 | 0.806108 | 9.655316e-50 | -8.615850e-47 |
| Msa0542090 | Msa0867120 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0542130 | Msa0867120 | 0.804857 | 1.766030e-49 | -8.615850e-47 |
| Msa0550540 | Msa0867120 | 0.821093 | 4.849613e-53 | -8.615850e-47 |
| Msa0550570 | Msa0867120 | 0.804465 | 2.132835e-49 | -8.615850e-47 |
| Msa0581130 | Msa0867120 | 0.811683 | 6.192953e-51 | -8.615850e-47 |
| Msa0600460 | Msa0867120 | 0.804213 | 2.406704e-49 | -8.615850e-47 |
| Msa0867120 | Msa0880730 | 0.853785 | 1.899791e-61 | -8.615850e-47 |
| Msa0867120 | Msa0887250 | 0.819166 | 1.339655e-52 | -8.615850e-47 |
| Msa0867120 | Msa0913240 | 0.850219 | 1.955974e-60 | -8.615850e-47 |
| Msa0867120 | Msa0945440 | 0.810142 | 1.335271e-50 | -8.615850e-47 |
| Msa0867120 | Msa0964060 | 0.802780 | 4.769038e-49 | -8.615850e-47 |
| Msa0867120 | Msa0966010 | 0.810391 | 1.179716e-50 | -8.615850e-47 |
| Msa0867120 | Msa0970530 | 0.812384 | 4.356825e-51 | -8.615850e-47 |
| Msa0867120 | Msa0970600 | 0.816707 | 4.812378e-52 | -8.615850e-47 |
| Msa0867120 | Msa0987370 | 0.802182 | 6.333630e-49 | -8.615850e-47 |
| Msa0867120 | Msa1082250 | 0.858305 | 9.026367e-63 | -8.615850e-47 |
| Msa0867120 | Msa1088290 | 0.847146 | 1.390734e-59 | -8.615850e-47 |
| Msa0867120 | Msa1120810 | 0.805828 | 1.105427e-49 | -8.615850e-47 |
| Msa0867120 | Msa1126850 | 0.828605 | 8.190867e-55 | -8.615850e-47 |
| Msa0867120 | Msa1133230 | 0.809021 | 2.324611e-50 | -8.615850e-47 |
| Msa0867120 | Msa1138520 | 0.811877 | 5.618130e-51 | -8.615850e-47 |
| Msa0867120 | Msa1138870 | 0.800577 | 1.350220e-48 | -8.615850e-47 |
| Msa0867120 | Msa1144040 | 0.800159 | 1.642199e-48 | -8.615850e-47 |
| Msa0867120 | Msa1165960 | 0.814561 | 1.446761e-51 | -8.615850e-47 |
| Msa0867120 | Msa1209260 | 0.817149 | 3.829662e-52 | -8.615850e-47 |
| Msa0867120 | Msa1209760 | 0.804720 | 1.886676e-49 | -8.615850e-47 |
| Msa0867120 | Msa1218500 | 0.861152 | 1.253565e-63 | -8.615850e-47 |
| Msa0867120 | Msa1351540 | 0.829811 | 4.176842e-55 | -8.615850e-47 |
| Msa0867120 | Msa1362090 | 0.937736 | 2.131140e-98 | -8.615850e-47 |
| Msa0867120 | Msa1375580 | 0.800049 | 1.729661e-48 | -8.615850e-47 |
| Msa0867120 | Msa1419870 | 0.810569 | 1.080156e-50 | -8.615850e-47 |
| Msa0867120 | Msa1436520 | 0.841373 | 4.943750e-58 | -8.615850e-47 |
| Msa0867120 | Msa1458210 | 0.882855 | 7.336179e-71 | -8.615850e-47 |
| Msa0867120 | Msa1458810 | 0.811934 | 5.460665e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0867120 | MtrunA17_Chr7g0269781 | 96.942 | 327 | 10 | 0 | 1 | 327 | 1 | 327 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0867120 | AT1G01350.1 | 69.375 | 320 | 95 | 2 | 8 | 327 | 20 | 336 | 3.44e-163 | 459 |
| Msa0867120 | AT5G06420.1 | 68.125 | 320 | 96 | 2 | 8 | 327 | 58 | 371 | 3.29e-161 | 455 |
| Msa0867120 | AT5G06420.2 | 68.125 | 320 | 96 | 2 | 8 | 327 | 58 | 371 | 3.29e-161 | 455 |
| Msa0867120 | AT4G01023.1 | 64.407 | 59 | 21 | 0 | 258 | 316 | 76 | 134 | 2.58e-26 | 104 |
| Msa0867120 | AT4G01023.3 | 65.079 | 63 | 21 | 1 | 254 | 316 | 92 | 153 | 5.98e-26 | 104 |
| Msa0867120 | AT4G01023.2 | 64.407 | 59 | 21 | 0 | 258 | 316 | 95 | 153 | 8.42e-26 | 103 |
Find 84 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCACTACAAGATATATTT+TGG | 0.081156 | 5_4:-69838507 | None:intergenic |
| CAATGACTATGTTTGCTTCT+TGG | 0.240264 | 5_4:+69838354 | Msa0867120:three_prime_UTR |
| CTCATATTCTTCCTATTAAC+AGG | 0.250339 | 5_4:-69837296 | None:intergenic |
| TTGAGTTGAAAACATATCTT+AGG | 0.269766 | 5_4:+69838437 | Msa0867120:three_prime_UTR |
| TCTTCAGAAAACCTGTTAAT+AGG | 0.277151 | 5_4:+69837285 | Msa0867120:CDS |
| TTGTAATCCTTGCATATATC+TGG | 0.290645 | 5_4:-69837803 | None:intergenic |
| GTGGGTCACACGGTCCTCTC+AGG | 0.313412 | 5_4:+69837738 | Msa0867120:CDS |
| GATCGAGGTGATTACAAATC+TGG | 0.331028 | 5_4:+69837872 | Msa0867120:CDS |
| CATTGTCTCATTGATCGTAT+TGG | 0.384962 | 5_4:-69838336 | None:intergenic |
| TGCAAGGATTACAAGGAAAC+TGG | 0.409524 | 5_4:+69837812 | Msa0867120:CDS |
| AAATGAAAGCTGGGTTTCTC+AGG | 0.415855 | 5_4:-69837473 | None:intergenic |
| CATTTGTCGAAACCCATTTG+TGG | 0.418726 | 5_4:+69838033 | Msa0867120:CDS |
| CTTGCTTAAGAGCTCTTTCA+CGG | 0.431115 | 5_4:-69837589 | None:intergenic |
| CTGTGAGCATTGTGCATTGA+AGG | 0.436410 | 5_4:+69838087 | Msa0867120:CDS |
| TAGCAAAGCAACAGCAACTT+TGG | 0.436558 | 5_4:+69837529 | Msa0867120:CDS |
| GTTGAGACAGGATCCACAAA+TGG | 0.441292 | 5_4:-69838046 | None:intergenic |
| CTGTCTTGCTTAGAGAAGAA+TGG | 0.441799 | 5_4:-69835213 | None:intergenic |
| AGAAGACTCGAAATGAAAGC+TGG | 0.441893 | 5_4:-69837483 | None:intergenic |
| ACACGGTCCTCTCAGGGCTT+CGG | 0.450938 | 5_4:+69837745 | Msa0867120:CDS |
| AAAGAGAAGAAAGTTGCAAA+GGG | 0.455160 | 5_4:-69835148 | None:intergenic |
| TGCTTACACTTGGTTGAGAC+AGG | 0.460245 | 5_4:-69838058 | None:intergenic |
| TGACTATGTTTGCTTCTTGG+AGG | 0.467406 | 5_4:+69838357 | Msa0867120:three_prime_UTR |
| CAATAATTATACAGATCATA+AGG | 0.469416 | 5_4:+69837673 | Msa0867120:CDS |
| GGTGGCAGATGGAGAAAGAA+TGG | 0.469953 | 5_4:+69837894 | Msa0867120:CDS |
| TGCAGGTGAGGATGCGGAAG+AGG | 0.471533 | 5_4:+69837952 | Msa0867120:CDS |
| TGTTTGAAATAGTATGTTTG+TGG | 0.479928 | 5_4:+69838540 | Msa0867120:three_prime_UTR |
| TTGAAATCTAGAATAGAAGA+AGG | 0.484019 | 5_4:-69835239 | None:intergenic |
| GAAAGAGAAGAAAGTTGCAA+AGG | 0.484176 | 5_4:-69835149 | None:intergenic |
| CGAGGATGTAAAATTATACA+AGG | 0.486690 | 5_4:+69837646 | Msa0867120:CDS |
| ACATACCTTGTTCAGTCGGC+TGG | 0.489348 | 5_4:-69837147 | None:intergenic |
| GCAAACAATTGCCAGTGAAA+AGG | 0.499122 | 5_4:+69837712 | Msa0867120:CDS |
| CGACAAATGAAACACGCAAA+TGG | 0.499537 | 5_4:-69838019 | None:intergenic |
| GAAAGCAAGGAAGATGAGAT+TGG | 0.507679 | 5_4:+69837928 | Msa0867120:CDS |
| TGCAGAGCTCTTCGAAGAGC+CGG | 0.511210 | 5_4:-69837429 | None:intergenic |
| AATTATACAGATCATAAGGC+TGG | 0.520545 | 5_4:+69837677 | Msa0867120:CDS |
| ATCGAGGTGATTACAAATCT+GGG | 0.520829 | 5_4:+69837873 | Msa0867120:CDS |
| GAGCTCTTTCACGGATGGCA+CGG | 0.524231 | 5_4:-69837580 | None:intergenic |
| TTGAGACAGGATCCACAAAT+GGG | 0.525917 | 5_4:-69838045 | None:intergenic |
| AGATATATGCAAGGATTACA+AGG | 0.530308 | 5_4:+69837805 | Msa0867120:CDS |
| TGGGTCACACGGTCCTCTCA+GGG | 0.532282 | 5_4:+69837739 | Msa0867120:CDS |
| CTTAAGAGCTCTTTCACGGA+TGG | 0.538525 | 5_4:-69837585 | None:intergenic |
| AGTCTCAAGGGAAAGAGTAC+TGG | 0.538575 | 5_4:+69837620 | Msa0867120:CDS |
| GAAAACCAGCCGACTGAACA+AGG | 0.548242 | 5_4:+69837142 | Msa0867120:CDS |
| TTGGAAGAGCAAAGAAGAAG+AGG | 0.552231 | 5_4:-69835187 | None:intergenic |
| GTGGCAGATGGAGAAAGAAT+GGG | 0.553122 | 5_4:+69837895 | Msa0867120:CDS |
| TTACAAATCTGGGTGGCAGA+TGG | 0.553483 | 5_4:+69837883 | Msa0867120:CDS |
| GAAGACTCGAAATGAAAGCT+GGG | 0.554193 | 5_4:-69837482 | None:intergenic |
| AGCTCTTTCACGGATGGCAC+GGG | 0.560125 | 5_4:-69837579 | None:intergenic |
| GAAACTGGTTACTGTGGGTA+TGG | 0.560524 | 5_4:+69837827 | Msa0867120:CDS |
| TATTGAGAATGAAGATAATG+AGG | 0.560776 | 5_4:+69837328 | Msa0867120:CDS |
| TCATGAGATACGAAAGAAGA+TGG | 0.563924 | 5_4:+69838293 | Msa0867120:CDS |
| CATATCTTAGGTTTCCGCAC+AGG | 0.564144 | 5_4:+69838449 | Msa0867120:three_prime_UTR |
| ATAGGAAGAATATGAGGAAG+CGG | 0.564756 | 5_4:+69837303 | Msa0867120:CDS |
| GGTGAGGATGCGGAAGAGGA+AGG | 0.573050 | 5_4:+69837956 | Msa0867120:CDS |
| AAATGACAGAACAAAAGAGA+GGG | 0.580612 | 5_4:-69838387 | None:intergenic |
| CTGTTAATAGGAAGAATATG+AGG | 0.583376 | 5_4:+69837297 | Msa0867120:CDS |
| GGGATGAAGCTGAGAAAGCA+AGG | 0.584805 | 5_4:+69837915 | Msa0867120:CDS |
| TCCCAAAATATATCTTGTAG+TGG | 0.585918 | 5_4:+69838505 | Msa0867120:three_prime_UTR |
| TACAAGGAAACTGGTTACTG+TGG | 0.587264 | 5_4:+69837821 | Msa0867120:CDS |
| ACAATTGCCAGTGAAAAGGC+TGG | 0.588175 | 5_4:+69837716 | Msa0867120:CDS |
| TTATACATACCTTGTTCAGT+CGG | 0.588673 | 5_4:-69837151 | None:intergenic |
| AAGAAAATTCGAAGCAAGCA+AGG | 0.590196 | 5_4:+69835261 | Msa0867120:five_prime_UTR |
| GATGAGATTGGCTGCAGGTG+AGG | 0.590274 | 5_4:+69837940 | Msa0867120:CDS |
| GAAAAGGCTGGTGGGTCACA+CGG | 0.600903 | 5_4:+69837728 | Msa0867120:CDS |
| AGGAAGATGAGATTGGCTGC+AGG | 0.603143 | 5_4:+69837935 | Msa0867120:CDS |
| ATTGGCTGCAGGTGAGGATG+CGG | 0.603342 | 5_4:+69837946 | Msa0867120:CDS |
| ATTGCCAGTGAAAAGGCTGG+TGG | 0.607353 | 5_4:+69837719 | Msa0867120:CDS |
| TGAAATCTAGAATAGAAGAA+GGG | 0.613287 | 5_4:-69835238 | None:intergenic |
| AAAATGACAGAACAAAAGAG+AGG | 0.617311 | 5_4:-69838388 | None:intergenic |
| GATACGAAAGAAGATGGCTG+AGG | 0.623889 | 5_4:+69838299 | Msa0867120:CDS |
| TTGCCAGTGAAAAGGCTGGT+GGG | 0.630138 | 5_4:+69837720 | Msa0867120:CDS |
| CAAGCGACTGAGAGTCTCAA+GGG | 0.630489 | 5_4:+69837608 | Msa0867120:CDS |
| ACAGAAGTAGTGCTTACACT+TGG | 0.630927 | 5_4:-69838068 | None:intergenic |
| GCAAGCGACTGAGAGTCTCA+AGG | 0.636269 | 5_4:+69837607 | Msa0867120:CDS |
| GGGAAAGAGTACTGGTTCCG+AGG | 0.640397 | 5_4:+69837628 | Msa0867120:CDS |
| ACAAGGAAACTGGTTACTGT+GGG | 0.647981 | 5_4:+69837822 | Msa0867120:CDS |
| TGTAAGTTTATGCATGATCG+AGG | 0.650874 | 5_4:+69837857 | Msa0867120:CDS |
| TTATCAGCCAGATATATGCA+AGG | 0.656472 | 5_4:+69837796 | Msa0867120:CDS |
| AATGACAGAACAAAAGAGAG+GGG | 0.684921 | 5_4:-69838386 | None:intergenic |
| AGAGCTCTTCGAAGAGCCGG+TGG | 0.686462 | 5_4:-69837426 | None:intergenic |
| GAGGATGTAAAATTATACAA+GGG | 0.688297 | 5_4:+69837647 | Msa0867120:CDS |
| ATGTGAGCCGAAGCCCTGAG+AGG | 0.689295 | 5_4:-69837752 | None:intergenic |
| CAAAATTGACAAGACCTGTG+CGG | 0.715778 | 5_4:-69838463 | None:intergenic |
| GAGGTGATTACAAATCTGGG+TGG | 0.758440 | 5_4:+69837876 | Msa0867120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTCTTTTTATATGATTTT+TGG | + | chr5_4:69836656-69836675 | Msa0867120:intron | 10.0% |
| !! | ATAGTATAAATAATAATGTA+GGG | - | chr5_4:69837036-69837055 | None:intergenic | 10.0% |
| !! | TATAGTATAAATAATAATGT+AGG | - | chr5_4:69837037-69837056 | None:intergenic | 10.0% |
| !!! | TCTTTTTTTTTTTTTGTGTT+TGG | + | chr5_4:69835614-69835633 | Msa0867120:intron | 15.0% |
| !!! | CTTTTTTTTTTTTTGTGTTT+GGG | + | chr5_4:69835615-69835634 | Msa0867120:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGTGTTTG+GGG | + | chr5_4:69835616-69835635 | Msa0867120:intron | 15.0% |
| !!! | AAAATAGAAGACTTATTTTA+AGG | + | chr5_4:69835662-69835681 | Msa0867120:intron | 15.0% |
| !! | TATTATGATAAGTAATAACA+TGG | - | chr5_4:69835716-69835735 | None:intergenic | 15.0% |
| !!! | AAATATATTGATGACATTTA+GGG | - | chr5_4:69836890-69836909 | None:intergenic | 15.0% |
| !!! | TCTTCTATTTTGCTAAAATA+TGG | - | chr5_4:69835653-69835672 | None:intergenic | 20.0% |
| !! | ATAATAGTAGACTTATTTGA+TGG | + | chr5_4:69835730-69835749 | Msa0867120:intron | 20.0% |
| !! | ACAAATTTCTCATTCATATA+TGG | + | chr5_4:69835791-69835810 | Msa0867120:intron | 20.0% |
| !!! | GATCAAAAGTATCATTAATA+TGG | - | chr5_4:69836358-69836377 | None:intergenic | 20.0% |
| !! | TGCATTATAAATCTATTTGA+TGG | + | chr5_4:69836840-69836859 | Msa0867120:intron | 20.0% |
| !!! | GAAATATATTGATGACATTT+AGG | - | chr5_4:69836891-69836910 | None:intergenic | 20.0% |
| !! | AATGTCATCAATATATTTCT+CGG | + | chr5_4:69836892-69836911 | Msa0867120:intron | 20.0% |
| !!! | AGACTCAAATTGAATTATTT+TGG | - | chr5_4:69836976-69836995 | None:intergenic | 20.0% |
| !! | AGAAAAAAAAAGGTTAATGA+TGG | - | chr5_4:69837236-69837255 | None:intergenic | 20.0% |
| !! | CAATAATTATACAGATCATA+AGG | + | chr5_4:69837673-69837692 | Msa0867120:CDS | 20.0% |
| !! | TGAAATCTAGAATAGAAGAA+GGG | - | chr5_4:69835241-69835260 | None:intergenic | 25.0% |
| !! | TTGAAATCTAGAATAGAAGA+AGG | - | chr5_4:69835242-69835261 | None:intergenic | 25.0% |
| !!! | TCTTATGTTTTTGTTGTTCT+GGG | + | chr5_4:69835307-69835326 | Msa0867120:intron | 25.0% |
| ! | CGAAATCTAAAAACGAATTA+GGG | - | chr5_4:69835335-69835354 | None:intergenic | 25.0% |
| ! | TCGAAATCTAAAAACGAATT+AGG | - | chr5_4:69835336-69835355 | None:intergenic | 25.0% |
| ! | GAAATTAAAACGCAGAAATA+TGG | - | chr5_4:69835420-69835439 | None:intergenic | 25.0% |
| !!! | AGACTTATTTTAAGGTTTCT+AGG | + | chr5_4:69835670-69835689 | Msa0867120:intron | 25.0% |
| !!! | GATTTTTGAAAGTAGATAAG+AGG | - | chr5_4:69835824-69835843 | None:intergenic | 25.0% |
| ! | GGATTTAATAATACATATCC+TGG | + | chr5_4:69835930-69835949 | Msa0867120:intron | 25.0% |
| ! | AATAATACATATCCTGGATA+AGG | + | chr5_4:69835936-69835955 | Msa0867120:intron | 25.0% |
| !! | TGATCTGGTTTAACAATTAT+AGG | + | chr5_4:69836099-69836118 | Msa0867120:intron | 25.0% |
| ! | TTAACAATTATAGGACATGT+TGG | + | chr5_4:69836108-69836127 | Msa0867120:intron | 25.0% |
| !! | AACATCCCTTACATTAATTT+TGG | + | chr5_4:69836159-69836178 | Msa0867120:intron | 25.0% |
| ! | CTCAACCAAAATTAATGTAA+GGG | - | chr5_4:69836167-69836186 | None:intergenic | 25.0% |
| !!! | CTTACATTAATTTTGGTTGA+GGG | + | chr5_4:69836166-69836185 | Msa0867120:intron | 25.0% |
| ! | TACTGTCATACTATCAAAAT+GGG | - | chr5_4:69836388-69836407 | None:intergenic | 25.0% |
| ! | TTACTGTCATACTATCAAAA+TGG | - | chr5_4:69836389-69836408 | None:intergenic | 25.0% |
| !! | TTTGATAGTATGACAGTAAT+TGG | + | chr5_4:69836390-69836409 | Msa0867120:intron | 25.0% |
| !! | TTGATAGTATGACAGTAATT+GGG | + | chr5_4:69836391-69836410 | Msa0867120:intron | 25.0% |
| !!! | GATAGACCATTTTTTGTTTA+AGG | + | chr5_4:69836606-69836625 | Msa0867120:intron | 25.0% |
| ! | CATGAAGAGAAAAATTTACT+CGG | - | chr5_4:69836943-69836962 | None:intergenic | 25.0% |
| ! | TTCAATTTGAGTCTGAATTT+CGG | + | chr5_4:69836982-69837001 | Msa0867120:intron | 25.0% |
| !!! | TATAGTGCTATTTCTCATAT+TGG | + | chr5_4:69837053-69837072 | Msa0867120:intron | 25.0% |
| !! | TCTCATATTGGTAATTGATT+TGG | + | chr5_4:69837065-69837084 | Msa0867120:intron | 25.0% |
| !! | TTTTACTATGGAAAATTCTG+AGG | + | chr5_4:69837108-69837127 | Msa0867120:exon | 25.0% |
| ! | TATTGAGAATGAAGATAATG+AGG | + | chr5_4:69837328-69837347 | Msa0867120:CDS | 25.0% |
| !! | CTTGTATAATTTTACATCCT+CGG | - | chr5_4:69837648-69837667 | None:intergenic | 25.0% |
| ! | GAGGATGTAAAATTATACAA+GGG | + | chr5_4:69837647-69837666 | Msa0867120:CDS | 25.0% |
| !!! | CTTATTTGCTTTGAAGTTAA+GGG | - | chr5_4:69838117-69838136 | None:intergenic | 25.0% |
| !!! | ACTTATTTGCTTTGAAGTTA+AGG | - | chr5_4:69838118-69838137 | None:intergenic | 25.0% |
| ! | AGAAGTTAGGCATAATTAAA+AGG | - | chr5_4:69838191-69838210 | None:intergenic | 25.0% |
| !!! | TGTCATTTTTAACTGTCAAA+TGG | + | chr5_4:69838402-69838421 | Msa0867120:three_prime_UTR | 25.0% |
| !!! | TTGAGTTGAAAACATATCTT+AGG | + | chr5_4:69838437-69838456 | Msa0867120:three_prime_UTR | 25.0% |
| !! | TCCACTACAAGATATATTTT+GGG | - | chr5_4:69838509-69838528 | None:intergenic | 25.0% |
| !! | TTCCACTACAAGATATATTT+TGG | - | chr5_4:69838510-69838529 | None:intergenic | 25.0% |
| !! | TGTTTGAAATAGTATGTTTG+TGG | + | chr5_4:69838540-69838559 | Msa0867120:three_prime_UTR | 25.0% |
| AAAGAGAAGAAAGTTGCAAA+GGG | - | chr5_4:69835151-69835170 | None:intergenic | 30.0% | |
| !!! | CTCTTATGTTTTTGTTGTTC+TGG | + | chr5_4:69835306-69835325 | Msa0867120:intron | 30.0% |
| TCCATAAGATGATGATTTCT+GGG | + | chr5_4:69835448-69835467 | Msa0867120:intron | 30.0% | |
| AAATCGAAACATCCTATGTT+CGG | - | chr5_4:69835485-69835504 | None:intergenic | 30.0% | |
| ! | TATTTCGATTTGTTTCGATC+AGG | + | chr5_4:69835516-69835535 | Msa0867120:intron | 30.0% |
| ! | TTGTTGCTGTTCTTATCTAT+AGG | + | chr5_4:69835557-69835576 | Msa0867120:intron | 30.0% |
| CAAATAGGATGGCTATTATT+TGG | - | chr5_4:69835758-69835777 | None:intergenic | 30.0% | |
| CAAATAATAGCCATCCTATT+TGG | + | chr5_4:69835756-69835775 | Msa0867120:intron | 30.0% | |
| CAAAGTCTTCTTAAATACCA+TGG | + | chr5_4:69835854-69835873 | Msa0867120:intron | 30.0% | |
| ! | TTTTCCACTATGTATTTAGC+AGG | + | chr5_4:69835909-69835928 | Msa0867120:intron | 30.0% |
| AAATCCTGCTAAATACATAG+TGG | - | chr5_4:69835916-69835935 | None:intergenic | 30.0% | |
| AGATCATCATAGATAACCAA+AGG | - | chr5_4:69836085-69836104 | None:intergenic | 30.0% | |
| TTTGGTTATCTATGATGATC+TGG | + | chr5_4:69836084-69836103 | Msa0867120:intron | 30.0% | |
| CCTCAACCAAAATTAATGTA+AGG | - | chr5_4:69836168-69836187 | None:intergenic | 30.0% | |
| !!! | CCTTACATTAATTTTGGTTG+AGG | + | chr5_4:69836165-69836184 | Msa0867120:intron | 30.0% |
| CTAGCTTATATCACCTAAAA+TGG | - | chr5_4:69836194-69836213 | None:intergenic | 30.0% | |
| ! | TAATGATACTTTTGATCACC+TGG | + | chr5_4:69836361-69836380 | Msa0867120:intron | 30.0% |
| ACTGTCATACTATCAAAATG+GGG | - | chr5_4:69836387-69836406 | None:intergenic | 30.0% | |
| TTGTATCACAAAAATCGAAC+TGG | + | chr5_4:69836489-69836508 | Msa0867120:intron | 30.0% | |
| GGCATATAATTCTTCCATAT+TGG | + | chr5_4:69836510-69836529 | Msa0867120:intron | 30.0% | |
| !! | GTGTTTCTACCATTATTTTG+TGG | + | chr5_4:69836566-69836585 | Msa0867120:intron | 30.0% |
| AAAATGGTCTATCCATTGAA+AGG | - | chr5_4:69836599-69836618 | None:intergenic | 30.0% | |
| CAGAGACCTTAAACAAAAAA+TGG | - | chr5_4:69836615-69836634 | None:intergenic | 30.0% | |
| CAAACATTAAGTACAAGTTC+AGG | - | chr5_4:69836817-69836836 | None:intergenic | 30.0% | |
| TCAATTTGAGTCTGAATTTC+GGG | + | chr5_4:69836983-69837002 | Msa0867120:intron | 30.0% | |
| !! | TGAATTTCGGGTTTAGTTAT+TGG | + | chr5_4:69836995-69837014 | Msa0867120:intron | 30.0% |
| TTATACATACCTTGTTCAGT+CGG | - | chr5_4:69837154-69837173 | None:intergenic | 30.0% | |
| GATGGTACAAAAAAATGTAG+AGG | - | chr5_4:69837218-69837237 | None:intergenic | 30.0% | |
| ACAAACGCGTAGAAAAAAAA+AGG | - | chr5_4:69837246-69837265 | None:intergenic | 30.0% | |
| TCTTCAGAAAACCTGTTAAT+AGG | + | chr5_4:69837285-69837304 | Msa0867120:CDS | 30.0% | |
| CTCATATTCTTCCTATTAAC+AGG | - | chr5_4:69837299-69837318 | None:intergenic | 30.0% | |
| CTGTTAATAGGAAGAATATG+AGG | + | chr5_4:69837297-69837316 | Msa0867120:CDS | 30.0% | |
| TGTTCAGAAAAAGAACATGA+AGG | + | chr5_4:69837382-69837401 | Msa0867120:CDS | 30.0% | |
| ! | AATAAGTTGTTCTTTTCCAC+CGG | + | chr5_4:69837410-69837429 | Msa0867120:CDS | 30.0% |
| CGAGGATGTAAAATTATACA+AGG | + | chr5_4:69837646-69837665 | Msa0867120:CDS | 30.0% | |
| AATTATACAGATCATAAGGC+TGG | + | chr5_4:69837677-69837696 | Msa0867120:CDS | 30.0% | |
| TTGTAATCCTTGCATATATC+TGG | - | chr5_4:69837806-69837825 | None:intergenic | 30.0% | |
| AGATATATGCAAGGATTACA+AGG | + | chr5_4:69837805-69837824 | Msa0867120:CDS | 30.0% | |
| AAGTAAAATGAGCAGAAGTT+AGG | - | chr5_4:69838204-69838223 | None:intergenic | 30.0% | |
| AAATGACAGAACAAAAGAGA+GGG | - | chr5_4:69838390-69838409 | None:intergenic | 30.0% | |
| AAAATGACAGAACAAAAGAG+AGG | - | chr5_4:69838391-69838410 | None:intergenic | 30.0% | |
| TCCCAAAATATATCTTGTAG+TGG | + | chr5_4:69838505-69838524 | Msa0867120:three_prime_UTR | 30.0% | |
| GAAAGAGAAGAAAGTTGCAA+AGG | - | chr5_4:69835152-69835171 | None:intergenic | 35.0% | |
| ! | GCTTAGAGAAGAATGGTTTT+TGG | - | chr5_4:69835209-69835228 | None:intergenic | 35.0% |
| AAGAAAATTCGAAGCAAGCA+AGG | + | chr5_4:69835261-69835280 | Msa0867120:five_prime_UTR | 35.0% | |
| CTCCATAAGATGATGATTTC+TGG | + | chr5_4:69835447-69835466 | Msa0867120:intron | 35.0% | |
| ACCCAGAAATCATCATCTTA+TGG | - | chr5_4:69835452-69835471 | None:intergenic | 35.0% | |
| AACAAACCCAGAAATCGAAT+TGG | - | chr5_4:69835542-69835561 | None:intergenic | 35.0% | |
| CTTCTTAAATACCATGGAAG+TGG | + | chr5_4:69835860-69835879 | Msa0867120:intron | 35.0% | |
| !! | TCTTGTTATTACCACTTCCA+TGG | - | chr5_4:69835874-69835893 | None:intergenic | 35.0% |
| GTCAATTCCACTAGAAATTG+AGG | + | chr5_4:69835970-69835989 | Msa0867120:intron | 35.0% | |
| TGAGCATAATTCTCAAGACA+CGG | + | chr5_4:69836053-69836072 | Msa0867120:intron | 35.0% | |
| ! | TGATATAAGCTAGCTTGCAA+TGG | + | chr5_4:69836201-69836220 | Msa0867120:intron | 35.0% |
| GGCTCAATCTAGACTAATAA+AGG | - | chr5_4:69836232-69836251 | None:intergenic | 35.0% | |
| AAGTTCCATAGAACCAAAGT+CGG | - | chr5_4:69836541-69836560 | None:intergenic | 35.0% | |
| ! | ATCGTGACAGCTTTTTACTA+TGG | + | chr5_4:69837096-69837115 | Msa0867120:intron | 35.0% |
| ATAGGAAGAATATGAGGAAG+CGG | + | chr5_4:69837303-69837322 | Msa0867120:CDS | 35.0% | |
| TTATCAGCCAGATATATGCA+AGG | + | chr5_4:69837796-69837815 | Msa0867120:CDS | 35.0% | |
| TGTAAGTTTATGCATGATCG+AGG | + | chr5_4:69837857-69837876 | Msa0867120:CDS | 35.0% | |
| ATCGAGGTGATTACAAATCT+GGG | + | chr5_4:69837873-69837892 | Msa0867120:CDS | 35.0% | |
| ACATTAAAAATGCCAAGCGT+AGG | - | chr5_4:69838270-69838289 | None:intergenic | 35.0% | |
| ! | TACGCTTGGCATTTTTAATG+TGG | + | chr5_4:69838269-69838288 | Msa0867120:CDS | 35.0% |
| TCATGAGATACGAAAGAAGA+TGG | + | chr5_4:69838293-69838312 | Msa0867120:CDS | 35.0% | |
| CATTGTCTCATTGATCGTAT+TGG | - | chr5_4:69838339-69838358 | None:intergenic | 35.0% | |
| CAATGACTATGTTTGCTTCT+TGG | + | chr5_4:69838354-69838373 | Msa0867120:three_prime_UTR | 35.0% | |
| AATGACAGAACAAAAGAGAG+GGG | - | chr5_4:69838389-69838408 | None:intergenic | 35.0% | |
| !!! | AAGAAGAAGAGGCGTTTTCT+GGG | - | chr5_4:69835179-69835198 | None:intergenic | 40.0% |
| !!! | AAAGAAGAAGAGGCGTTTTC+TGG | - | chr5_4:69835180-69835199 | None:intergenic | 40.0% |
| TTGGAAGAGCAAAGAAGAAG+AGG | - | chr5_4:69835190-69835209 | None:intergenic | 40.0% | |
| CTGTCTTGCTTAGAGAAGAA+TGG | - | chr5_4:69835216-69835235 | None:intergenic | 40.0% | |
| !! | ACTGTGTTTGTTGCGTTTTC+TGG | + | chr5_4:69835366-69835385 | Msa0867120:intron | 40.0% |
| ATCAGGCCAATTCGATTTCT+GGG | + | chr5_4:69835533-69835552 | Msa0867120:intron | 40.0% | |
| !!! | TTTTTTGTGTTTGGGGATGC+TGG | + | chr5_4:69835623-69835642 | Msa0867120:intron | 40.0% |
| ACAGAGATGTCCAAATAGGA+TGG | - | chr5_4:69835769-69835788 | None:intergenic | 40.0% | |
| GTTCACAGAGATGTCCAAAT+AGG | - | chr5_4:69835773-69835792 | None:intergenic | 40.0% | |
| ! | TTGGTTGAGGGAACCATTTT+AGG | + | chr5_4:69836178-69836197 | Msa0867120:intron | 40.0% |
| TGTTAGAGCAATGGAACTCA+AGG | - | chr5_4:69836253-69836272 | None:intergenic | 40.0% | |
| TTCCATTGCTCTAACATTGC+AGG | + | chr5_4:69836257-69836276 | Msa0867120:intron | 40.0% | |
| TCCATTGCTCTAACATTGCA+GGG | + | chr5_4:69836258-69836277 | Msa0867120:intron | 40.0% | |
| TGTGTTGTCTTGCTACAGTT+AGG | + | chr5_4:69836711-69836730 | Msa0867120:intron | 40.0% | |
| CGGTGACATGACAAAGAATA+TGG | - | chr5_4:69836923-69836942 | None:intergenic | 40.0% | |
| AAATGAAAGCTGGGTTTCTC+AGG | - | chr5_4:69837476-69837495 | None:intergenic | 40.0% | |
| GAAGACTCGAAATGAAAGCT+GGG | - | chr5_4:69837485-69837504 | None:intergenic | 40.0% | |
| AGAAGACTCGAAATGAAAGC+TGG | - | chr5_4:69837486-69837505 | None:intergenic | 40.0% | |
| TAGCAAAGCAACAGCAACTT+TGG | + | chr5_4:69837529-69837548 | Msa0867120:CDS | 40.0% | |
| CTTGCTTAAGAGCTCTTTCA+CGG | - | chr5_4:69837592-69837611 | None:intergenic | 40.0% | |
| GCAAACAATTGCCAGTGAAA+AGG | + | chr5_4:69837712-69837731 | Msa0867120:CDS | 40.0% | |
| TGCAAGGATTACAAGGAAAC+TGG | + | chr5_4:69837812-69837831 | Msa0867120:CDS | 40.0% | |
| TACAAGGAAACTGGTTACTG+TGG | + | chr5_4:69837821-69837840 | Msa0867120:CDS | 40.0% | |
| ACAAGGAAACTGGTTACTGT+GGG | + | chr5_4:69837822-69837841 | Msa0867120:CDS | 40.0% | |
| GATCGAGGTGATTACAAATC+TGG | + | chr5_4:69837872-69837891 | Msa0867120:CDS | 40.0% | |
| GAAAGCAAGGAAGATGAGAT+TGG | + | chr5_4:69837928-69837947 | Msa0867120:CDS | 40.0% | |
| CGACAAATGAAACACGCAAA+TGG | - | chr5_4:69838022-69838041 | None:intergenic | 40.0% | |
| CATTTGTCGAAACCCATTTG+TGG | + | chr5_4:69838033-69838052 | Msa0867120:CDS | 40.0% | |
| TTGAGACAGGATCCACAAAT+GGG | - | chr5_4:69838048-69838067 | None:intergenic | 40.0% | |
| ACAGAAGTAGTGCTTACACT+TGG | - | chr5_4:69838071-69838090 | None:intergenic | 40.0% | |
| TGACTATGTTTGCTTCTTGG+AGG | + | chr5_4:69838357-69838376 | Msa0867120:three_prime_UTR | 40.0% | |
| CAAAATTGACAAGACCTGTG+CGG | - | chr5_4:69838466-69838485 | None:intergenic | 40.0% | |
| GATCAGGCCAATTCGATTTC+TGG | + | chr5_4:69835532-69835551 | Msa0867120:intron | 45.0% | |
| CAACTTATGCTGCCTTATCC+AGG | - | chr5_4:69835951-69835970 | None:intergenic | 45.0% | |
| ! | CTGCATGCCTCAATTTCTAG+TGG | - | chr5_4:69835980-69835999 | None:intergenic | 45.0% |
| CAAGACACGGTTGTTACCTT+TGG | + | chr5_4:69836066-69836085 | Msa0867120:intron | 45.0% | |
| !! | AGGACATGTTGGTCTGCTTT+TGG | + | chr5_4:69836119-69836138 | Msa0867120:intron | 45.0% |
| ACCCTGCAATGTTAGAGCAA+TGG | - | chr5_4:69836262-69836281 | None:intergenic | 45.0% | |
| CATACTATCAAAATGGGGCC+AGG | - | chr5_4:69836382-69836401 | None:intergenic | 45.0% | |
| ACTCTGTTCCAGATCCTACA+CGG | + | chr5_4:69836458-69836477 | Msa0867120:intron | 45.0% | |
| ATACAATGACCGATCCGTGT+AGG | - | chr5_4:69836475-69836494 | None:intergenic | 45.0% | |
| CAAAGTCGGCGAAACCAATA+TGG | - | chr5_4:69836527-69836546 | None:intergenic | 45.0% | |
| !! | CATATTGGTTTCGCCGACTT+TGG | + | chr5_4:69836525-69836544 | Msa0867120:intron | 45.0% |
| !! | TTTCGCCGACTTTGGTTCTA+TGG | + | chr5_4:69836533-69836552 | Msa0867120:intron | 45.0% |
| GGCGCAAGACCACAAAATAA+TGG | - | chr5_4:69836578-69836597 | None:intergenic | 45.0% | |
| CTTAAGAGCTCTTTCACGGA+TGG | - | chr5_4:69837588-69837607 | None:intergenic | 45.0% | |
| ! | AGTCTCAAGGGAAAGAGTAC+TGG | + | chr5_4:69837620-69837639 | Msa0867120:CDS | 45.0% |
| ACAATTGCCAGTGAAAAGGC+TGG | + | chr5_4:69837716-69837735 | Msa0867120:CDS | 45.0% | |
| GAAACTGGTTACTGTGGGTA+TGG | + | chr5_4:69837827-69837846 | Msa0867120:CDS | 45.0% | |
| GAGGTGATTACAAATCTGGG+TGG | + | chr5_4:69837876-69837895 | Msa0867120:CDS | 45.0% | |
| TTACAAATCTGGGTGGCAGA+TGG | + | chr5_4:69837883-69837902 | Msa0867120:CDS | 45.0% | |
| GTGGCAGATGGAGAAAGAAT+GGG | + | chr5_4:69837895-69837914 | Msa0867120:CDS | 45.0% | |
| GTTGAGACAGGATCCACAAA+TGG | - | chr5_4:69838049-69838068 | None:intergenic | 45.0% | |
| TGCTTACACTTGGTTGAGAC+AGG | - | chr5_4:69838061-69838080 | None:intergenic | 45.0% | |
| ! | CTGTGAGCATTGTGCATTGA+AGG | + | chr5_4:69838087-69838106 | Msa0867120:CDS | 45.0% |
| GATACGAAAGAAGATGGCTG+AGG | + | chr5_4:69838299-69838318 | Msa0867120:CDS | 45.0% | |
| CATATCTTAGGTTTCCGCAC+AGG | + | chr5_4:69838449-69838468 | Msa0867120:three_prime_UTR | 45.0% | |
| ! | GTTTGTTGCGTGCCGAACAT+AGG | + | chr5_4:69835470-69835489 | Msa0867120:intron | 50.0% |
| GTTCCAGATCCTACACGGAT+CGG | + | chr5_4:69836463-69836482 | Msa0867120:intron | 50.0% | |
| ! | TGTGGTCTTGCGCCTTTCAA+TGG | + | chr5_4:69836584-69836603 | Msa0867120:intron | 50.0% |
| !!! | CGGCTGGTTTTCAGCAGATT+TGG | - | chr5_4:69837134-69837153 | None:intergenic | 50.0% |
| GAAAACCAGCCGACTGAACA+AGG | + | chr5_4:69837142-69837161 | Msa0867120:CDS | 50.0% | |
| ACATACCTTGTTCAGTCGGC+TGG | - | chr5_4:69837150-69837169 | None:intergenic | 50.0% | |
| CAAGCGACTGAGAGTCTCAA+GGG | + | chr5_4:69837608-69837627 | Msa0867120:CDS | 50.0% | |
| ATTGCCAGTGAAAAGGCTGG+TGG | + | chr5_4:69837719-69837738 | Msa0867120:CDS | 50.0% | |
| TTGCCAGTGAAAAGGCTGGT+GGG | + | chr5_4:69837720-69837739 | Msa0867120:CDS | 50.0% | |
| GGTGGCAGATGGAGAAAGAA+TGG | + | chr5_4:69837894-69837913 | Msa0867120:CDS | 50.0% | |
| GGGATGAAGCTGAGAAAGCA+AGG | + | chr5_4:69837915-69837934 | Msa0867120:CDS | 50.0% | |
| ! | AGGAAGATGAGATTGGCTGC+AGG | + | chr5_4:69837935-69837954 | Msa0867120:CDS | 50.0% |
| TGACCGATCCGTGTAGGATC+TGG | - | chr5_4:69836469-69836488 | None:intergenic | 55.0% | |
| TGCAGAGCTCTTCGAAGAGC+CGG | - | chr5_4:69837432-69837451 | None:intergenic | 55.0% | |
| AGCTCTTTCACGGATGGCAC+GGG | - | chr5_4:69837582-69837601 | None:intergenic | 55.0% | |
| GAGCTCTTTCACGGATGGCA+CGG | - | chr5_4:69837583-69837602 | None:intergenic | 55.0% | |
| GCAAGCGACTGAGAGTCTCA+AGG | + | chr5_4:69837607-69837626 | Msa0867120:CDS | 55.0% | |
| !! | GGGAAAGAGTACTGGTTCCG+AGG | + | chr5_4:69837628-69837647 | Msa0867120:CDS | 55.0% |
| ! | TGACCCACCAGCCTTTTCAC+TGG | - | chr5_4:69837726-69837745 | None:intergenic | 55.0% |
| ! | GAAAAGGCTGGTGGGTCACA+CGG | + | chr5_4:69837728-69837747 | Msa0867120:CDS | 55.0% |
| ! | GATGAGATTGGCTGCAGGTG+AGG | + | chr5_4:69837940-69837959 | Msa0867120:CDS | 55.0% |
| ATTGGCTGCAGGTGAGGATG+CGG | + | chr5_4:69837946-69837965 | Msa0867120:CDS | 55.0% | |
| GTCTGCAATCAGCCTACGCT+TGG | + | chr5_4:69838255-69838274 | Msa0867120:CDS | 55.0% | |
| AGAGCTCTTCGAAGAGCCGG+TGG | - | chr5_4:69837429-69837448 | None:intergenic | 60.0% | |
| TGGGTCACACGGTCCTCTCA+GGG | + | chr5_4:69837739-69837758 | Msa0867120:CDS | 60.0% | |
| ACACGGTCCTCTCAGGGCTT+CGG | + | chr5_4:69837745-69837764 | Msa0867120:CDS | 60.0% | |
| ATGTGAGCCGAAGCCCTGAG+AGG | - | chr5_4:69837755-69837774 | None:intergenic | 60.0% | |
| TGCAGGTGAGGATGCGGAAG+AGG | + | chr5_4:69837952-69837971 | Msa0867120:CDS | 60.0% | |
| GGTGAGGATGCGGAAGAGGA+AGG | + | chr5_4:69837956-69837975 | Msa0867120:CDS | 60.0% | |
| GTGGGTCACACGGTCCTCTC+AGG | + | chr5_4:69837738-69837757 | Msa0867120:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 69835117 | 69838615 | 69835117 | ID=Msa0867120;Name=Msa0867120 |
| chr5_4 | mRNA | 69835117 | 69838615 | 69835117 | ID=Msa0867120-mRNA-1;Parent=Msa0867120;Name=Msa0867120-mRNA-1;_AED=0.18;_eAED=0.18;_QI=175|1|1|1|0.66|0.75|4|286|327 |
| chr5_4 | exon | 69835117 | 69835282 | 69835117 | ID=Msa0867120-mRNA-1:exon:21940;Parent=Msa0867120-mRNA-1 |
| chr5_4 | exon | 69837106 | 69837163 | 69837106 | ID=Msa0867120-mRNA-1:exon:21941;Parent=Msa0867120-mRNA-1 |
| chr5_4 | exon | 69837276 | 69838108 | 69837276 | ID=Msa0867120-mRNA-1:exon:21942;Parent=Msa0867120-mRNA-1 |
| chr5_4 | exon | 69838228 | 69838615 | 69838228 | ID=Msa0867120-mRNA-1:exon:21943;Parent=Msa0867120-mRNA-1 |
| chr5_4 | five_prime_UTR | 69835117 | 69835282 | 69835117 | ID=Msa0867120-mRNA-1:five_prime_utr;Parent=Msa0867120-mRNA-1 |
| chr5_4 | five_prime_UTR | 69837106 | 69837114 | 69837106 | ID=Msa0867120-mRNA-1:five_prime_utr;Parent=Msa0867120-mRNA-1 |
| chr5_4 | CDS | 69837115 | 69837163 | 69837115 | ID=Msa0867120-mRNA-1:cds;Parent=Msa0867120-mRNA-1 |
| chr5_4 | CDS | 69837276 | 69838108 | 69837276 | ID=Msa0867120-mRNA-1:cds;Parent=Msa0867120-mRNA-1 |
| chr5_4 | CDS | 69838228 | 69838329 | 69838228 | ID=Msa0867120-mRNA-1:cds;Parent=Msa0867120-mRNA-1 |
| chr5_4 | three_prime_UTR | 69838330 | 69838615 | 69838330 | ID=Msa0867120-mRNA-1:three_prime_utr;Parent=Msa0867120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
