Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239060 | XP_003594194.1 | 98.113 | 106 | 2 | 0 | 30 | 135 | 1 | 106 | 3.06e-72 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239060 | sp|Q8LD38|MPC3_ARATH | 62.037 | 108 | 39 | 1 | 30 | 135 | 1 | 108 | 1.50e-47 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239060 | Q2HVG0 | 98.113 | 106 | 2 | 0 | 30 | 135 | 1 | 106 | 1.46e-72 | 221 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008840 | Msa0239060 | 0.824407 | 8.207648e-54 | -8.615850e-47 |
| Msa0010490 | Msa0239060 | 0.802872 | 4.564807e-49 | -8.615850e-47 |
| Msa0010500 | Msa0239060 | 0.803485 | 3.408374e-49 | -8.615850e-47 |
| Msa0012710 | Msa0239060 | 0.802699 | 4.956200e-49 | -8.615850e-47 |
| Msa0017320 | Msa0239060 | 0.821121 | 4.777688e-53 | -8.615850e-47 |
| Msa0061500 | Msa0239060 | 0.811826 | 5.764156e-51 | -8.615850e-47 |
| Msa0065010 | Msa0239060 | 0.810410 | 1.169079e-50 | -8.615850e-47 |
| Msa0065650 | Msa0239060 | 0.805795 | 1.123445e-49 | -8.615850e-47 |
| Msa0079230 | Msa0239060 | 0.812004 | 5.272917e-51 | -8.615850e-47 |
| Msa0100800 | Msa0239060 | 0.807755 | 4.328676e-50 | -8.615850e-47 |
| Msa0111080 | Msa0239060 | 0.803259 | 3.797105e-49 | -8.615850e-47 |
| Msa0118540 | Msa0239060 | 0.804710 | 1.895672e-49 | -8.615850e-47 |
| Msa0119440 | Msa0239060 | 0.834733 | 2.527198e-56 | -8.615850e-47 |
| Msa0126880 | Msa0239060 | 0.845060 | 5.139439e-59 | -8.615850e-47 |
| Msa0139670 | Msa0239060 | 0.808645 | 2.797388e-50 | -8.615850e-47 |
| Msa0142500 | Msa0239060 | 0.803331 | 3.667893e-49 | -8.615850e-47 |
| Msa0145110 | Msa0239060 | 0.804187 | 2.437040e-49 | -8.615850e-47 |
| Msa0152560 | Msa0239060 | 0.811389 | 7.174256e-51 | -8.615850e-47 |
| Msa0154920 | Msa0239060 | 0.803542 | 3.317779e-49 | -8.615850e-47 |
| Msa0171980 | Msa0239060 | 0.823027 | 1.727650e-53 | -8.615850e-47 |
| Msa0183870 | Msa0239060 | 0.822364 | 2.464774e-53 | -8.615850e-47 |
| Msa0197530 | Msa0239060 | 0.959886 | 6.133680e-118 | -8.615850e-47 |
| Msa0202930 | Msa0239060 | 0.808994 | 2.355804e-50 | -8.615850e-47 |
| Msa0233380 | Msa0239060 | 0.805470 | 1.314666e-49 | -8.615850e-47 |
| Msa0236070 | Msa0239060 | 0.802884 | 4.538219e-49 | -8.615850e-47 |
| Msa0239060 | Msa0240270 | 0.802951 | 4.396340e-49 | -8.615850e-47 |
| Msa0239060 | Msa0265160 | 0.801592 | 8.373993e-49 | -8.615850e-47 |
| Msa0239060 | Msa0274100 | 0.807568 | 4.743450e-50 | -8.615850e-47 |
| Msa0239060 | Msa0276950 | 0.864053 | 1.603242e-64 | -8.615850e-47 |
| Msa0239060 | Msa0296920 | 0.811063 | 8.443675e-51 | -8.615850e-47 |
| Msa0239060 | Msa0296980 | -0.809184 | 2.144868e-50 | -8.615850e-47 |
| Msa0239060 | Msa0316920 | 0.868667 | 5.505659e-66 | -8.615850e-47 |
| Msa0239060 | Msa0319290 | 0.802409 | 5.687293e-49 | -8.615850e-47 |
| Msa0239060 | Msa0335320 | -0.814770 | 1.300770e-51 | -8.615850e-47 |
| Msa0239060 | Msa0347750 | 0.815750 | 7.877759e-52 | -8.615850e-47 |
| Msa0239060 | Msa0381700 | 0.800447 | 1.434929e-48 | -8.615850e-47 |
| Msa0239060 | Msa0382370 | 0.816848 | 4.475918e-52 | -8.615850e-47 |
| Msa0239060 | Msa0418400 | 0.823837 | 1.116801e-53 | -8.615850e-47 |
| Msa0239060 | Msa0422180 | 0.816211 | 6.215738e-52 | -8.615850e-47 |
| Msa0239060 | Msa0432160 | 0.801426 | 9.054876e-49 | -8.615850e-47 |
| Msa0239060 | Msa0436190 | 0.810346 | 1.206857e-50 | -8.615850e-47 |
| Msa0239060 | Msa0436200 | 0.803355 | 3.627565e-49 | -8.615850e-47 |
| Msa0239060 | Msa0436920 | -0.838974 | 2.090445e-57 | -8.615850e-47 |
| Msa0239060 | Msa0439890 | 0.820610 | 6.261896e-53 | -8.615850e-47 |
| Msa0239060 | Msa0443430 | 0.803572 | 3.269245e-49 | -8.615850e-47 |
| Msa0239060 | Msa0450480 | 0.804585 | 2.013351e-49 | -8.615850e-47 |
| Msa0239060 | Msa0472710 | 0.805217 | 1.484951e-49 | -8.615850e-47 |
| Msa0239060 | Msa0472770 | 0.831103 | 2.017568e-55 | -8.615850e-47 |
| Msa0239060 | Msa0476680 | 0.801478 | 8.836918e-49 | -8.615850e-47 |
| Msa0239060 | Msa0514610 | 0.829301 | 5.558765e-55 | -8.615850e-47 |
| Msa0239060 | Msa0521010 | 0.802541 | 5.341299e-49 | -8.615850e-47 |
| Msa0239060 | Msa0524590 | 0.807082 | 6.013942e-50 | -8.615850e-47 |
| Msa0239060 | Msa0534410 | 0.803007 | 4.280127e-49 | -8.615850e-47 |
| Msa0239060 | Msa0569780 | 0.830952 | 2.197683e-55 | -8.615850e-47 |
| Msa0239060 | Msa0587030 | 0.800961 | 1.127473e-48 | -8.615850e-47 |
| Msa0239060 | Msa0602370 | 0.830626 | 2.641073e-55 | -8.615850e-47 |
| Msa0239060 | Msa0609220 | 0.827500 | 1.511855e-54 | -8.615850e-47 |
| Msa0239060 | Msa0615680 | 0.819290 | 1.255002e-52 | -8.615850e-47 |
| Msa0239060 | Msa0616450 | 0.800037 | 1.739414e-48 | -8.615850e-47 |
| Msa0239060 | Msa0626850 | 0.811446 | 6.971362e-51 | -8.615850e-47 |
| Msa0239060 | Msa0657870 | 0.805346 | 1.395640e-49 | -8.615850e-47 |
| Msa0239060 | Msa0659790 | 0.834699 | 2.576907e-56 | -8.615850e-47 |
| Msa0239060 | Msa0664970 | 0.812568 | 3.970676e-51 | -8.615850e-47 |
| Msa0239060 | Msa0669720 | 0.815275 | 1.004811e-51 | -8.615850e-47 |
| Msa0239060 | Msa0672480 | 0.802665 | 5.036635e-49 | -8.615850e-47 |
| Msa0239060 | Msa0701100 | 0.815195 | 1.046894e-51 | -8.615850e-47 |
| Msa0239060 | Msa0705990 | 0.821163 | 4.672913e-53 | -8.615850e-47 |
| Msa0239060 | Msa0709120 | 0.803728 | 3.035070e-49 | -8.615850e-47 |
| Msa0239060 | Msa0720370 | 0.813682 | 2.262561e-51 | -8.615850e-47 |
| Msa0239060 | Msa0721340 | 0.801100 | 1.055667e-48 | -8.615850e-47 |
| Msa0239060 | Msa0742150 | 0.811520 | 6.719209e-51 | -8.615850e-47 |
| Msa0239060 | Msa0743530 | 0.814415 | 1.558430e-51 | -8.615850e-47 |
| Msa0239060 | Msa0746170 | 0.800242 | 1.579919e-48 | -8.615850e-47 |
| Msa0239060 | Msa0748660 | 0.819480 | 1.135787e-52 | -8.615850e-47 |
| Msa0239060 | Msa0751010 | 0.802196 | 6.291232e-49 | -8.615850e-47 |
| Msa0239060 | Msa0758230 | 0.804191 | 2.431968e-49 | -8.615850e-47 |
| Msa0239060 | Msa0764920 | 0.810303 | 1.232809e-50 | -8.615850e-47 |
| Msa0239060 | Msa0775560 | 0.821325 | 4.286370e-53 | -8.615850e-47 |
| Msa0239060 | Msa0779260 | 0.800685 | 1.283404e-48 | -8.615850e-47 |
| Msa0239060 | Msa0794050 | 0.820923 | 5.307472e-53 | -8.615850e-47 |
| Msa0239060 | Msa0800370 | 0.805632 | 1.215493e-49 | -8.615850e-47 |
| Msa0239060 | Msa0813260 | 0.804481 | 2.116360e-49 | -8.615850e-47 |
| Msa0239060 | Msa0818770 | 0.824972 | 6.041622e-54 | -8.615850e-47 |
| Msa0239060 | Msa0822170 | 0.809531 | 1.806986e-50 | -8.615850e-47 |
| Msa0239060 | Msa0877710 | 0.806182 | 9.311766e-50 | -8.615850e-47 |
| Msa0239060 | Msa0888990 | 0.801289 | 9.657725e-49 | -8.615850e-47 |
| Msa0239060 | Msa0905990 | 0.813161 | 2.945017e-51 | -8.615850e-47 |
| Msa0239060 | Msa0943270 | 0.807267 | 5.493974e-50 | -8.615850e-47 |
| Msa0239060 | Msa0944200 | 0.803035 | 4.225016e-49 | -8.615850e-47 |
| Msa0239060 | Msa0944610 | 0.810208 | 1.292479e-50 | -8.615850e-47 |
| Msa0239060 | Msa0947800 | 0.806907 | 6.547392e-50 | -8.615850e-47 |
| Msa0239060 | Msa0951400 | 0.812485 | 4.140365e-51 | -8.615850e-47 |
| Msa0239060 | Msa0999920 | 0.820174 | 7.882621e-53 | -8.615850e-47 |
| Msa0239060 | Msa1034270 | 0.820484 | 6.693869e-53 | -8.615850e-47 |
| Msa0239060 | Msa1034290 | 0.821127 | 4.761750e-53 | -8.615850e-47 |
| Msa0239060 | Msa1036910 | 0.820020 | 8.553464e-53 | -8.615850e-47 |
| Msa0239060 | Msa1063420 | 0.805118 | 1.557524e-49 | -8.615850e-47 |
| Msa0239060 | Msa1070390 | 0.801854 | 7.398892e-49 | -8.615850e-47 |
| Msa0239060 | Msa1072900 | 0.806393 | 8.405790e-50 | -8.615850e-47 |
| Msa0239060 | Msa1084500 | -0.832185 | 1.091860e-55 | -8.615850e-47 |
| Msa0239060 | Msa1089270 | 0.803550 | 3.304834e-49 | -8.615850e-47 |
| Msa0239060 | Msa1093100 | 0.820377 | 7.084895e-53 | -8.615850e-47 |
| Msa0239060 | Msa1113880 | 0.807688 | 4.473871e-50 | -8.615850e-47 |
| Msa0239060 | Msa1115280 | 0.810207 | 1.293072e-50 | -8.615850e-47 |
| Msa0239060 | Msa1125790 | -0.852174 | 5.489456e-61 | -8.615850e-47 |
| Msa0239060 | Msa1136790 | 0.833233 | 5.998321e-56 | -8.615850e-47 |
| Msa0239060 | Msa1143020 | 0.814952 | 1.185349e-51 | -8.615850e-47 |
| Msa0239060 | Msa1164020 | 0.815836 | 7.538842e-52 | -8.615850e-47 |
| Msa0239060 | Msa1178370 | 0.819536 | 1.103222e-52 | -8.615850e-47 |
| Msa0239060 | Msa1200320 | 0.855155 | 7.628155e-62 | -8.615850e-47 |
| Msa0239060 | Msa1225100 | 0.828960 | 6.723435e-55 | -8.615850e-47 |
| Msa0239060 | Msa1226610 | 0.809828 | 1.559899e-50 | -8.615850e-47 |
| Msa0239060 | Msa1253810 | 0.815921 | 7.213750e-52 | -8.615850e-47 |
| Msa0239060 | Msa1307180 | 0.806170 | 9.365947e-50 | -8.615850e-47 |
| Msa0239060 | Msa1329870 | 0.832802 | 7.678899e-56 | -8.615850e-47 |
| Msa0239060 | Msa1332050 | 0.816270 | 6.031291e-52 | -8.615850e-47 |
| Msa0239060 | Msa1336560 | 0.806565 | 7.732354e-50 | -8.615850e-47 |
| Msa0239060 | Msa1359270 | 0.802697 | 4.960992e-49 | -8.615850e-47 |
| Msa0239060 | Msa1364160 | 0.812461 | 4.190530e-51 | -8.615850e-47 |
| Msa0239060 | Msa1372280 | 0.811040 | 8.542423e-51 | -8.615850e-47 |
| Msa0239060 | Msa1381480 | 0.840829 | 6.869884e-58 | -8.615850e-47 |
| Msa0239060 | Msa1381650 | 0.817648 | 2.957659e-52 | -8.615850e-47 |
| Msa0239060 | Msa1382020 | 0.818225 | 2.190822e-52 | -8.615850e-47 |
| Msa0239060 | Msa1383350 | 0.807450 | 5.024426e-50 | -8.615850e-47 |
| Msa0239060 | Msa1405220 | 0.840398 | 8.908934e-58 | -8.615850e-47 |
| Msa0239060 | Msa1421900 | 0.842256 | 2.889136e-58 | -8.615850e-47 |
| Msa0239060 | Msa1422810 | 0.836733 | 7.870683e-57 | -8.615850e-47 |
| Msa0239060 | Msa1426920 | 0.809819 | 1.567088e-50 | -8.615850e-47 |
| Msa0239060 | Msa1430130 | 0.822648 | 2.116601e-53 | -8.615850e-47 |
| Msa0239060 | Msa1447890 | 0.818481 | 1.916738e-52 | -8.615850e-47 |
| Msa0239060 | Msa1454450 | 0.805652 | 1.203597e-49 | -8.615850e-47 |
| Msa0239060 | Msa1454960 | 0.822325 | 2.516223e-53 | -8.615850e-47 |
| Msa0239060 | Msa1457160 | 0.823749 | 1.171397e-53 | -8.615850e-47 |
| Msa0239060 | Msa1458090 | 0.824469 | 7.938867e-54 | -8.615850e-47 |
| Msa0239060 | Msa1459960 | 0.802351 | 5.846461e-49 | -8.615850e-47 |
| Msa0239060 | Msa1460750 | 0.824095 | 9.720347e-54 | -8.615850e-47 |
| Msa0239060 | Msa1462360 | 0.803610 | 3.210770e-49 | -8.615850e-47 |
| Msa0239060 | Msa1462470 | 0.831663 | 1.469291e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239060 | MtrunA17_Chr2g0289641 | 98.113 | 106 | 2 | 0 | 30 | 135 | 1 | 106 | 2.81e-76 | 221 |
| Msa0239060 | MtrunA17_Chr2g0289651 | 68.868 | 106 | 33 | 0 | 30 | 135 | 1 | 106 | 2.64e-54 | 166 |
| Msa0239060 | MtrunA17_Chr1g0210881 | 35.227 | 88 | 57 | 0 | 33 | 120 | 2 | 89 | 4.96e-15 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239060 | AT4G05590.1 | 62.037 | 108 | 39 | 1 | 30 | 135 | 1 | 108 | 1.53e-48 | 151 |
| Msa0239060 | AT4G22310.1 | 65.000 | 100 | 35 | 0 | 30 | 129 | 1 | 100 | 4.47e-48 | 150 |
| Msa0239060 | AT4G14695.3 | 61.321 | 106 | 41 | 0 | 30 | 135 | 1 | 106 | 3.29e-45 | 143 |
| Msa0239060 | AT4G14695.1 | 61.321 | 106 | 41 | 0 | 30 | 135 | 1 | 106 | 3.29e-45 | 143 |
| Msa0239060 | AT4G05590.2 | 45.890 | 146 | 39 | 2 | 30 | 135 | 1 | 146 | 6.36e-41 | 133 |
| Msa0239060 | AT4G05590.3 | 68.116 | 69 | 22 | 0 | 30 | 98 | 1 | 69 | 2.58e-33 | 112 |
| Msa0239060 | AT4G14695.2 | 47.170 | 106 | 38 | 1 | 30 | 135 | 1 | 88 | 3.60e-27 | 97.1 |
| Msa0239060 | AT5G20090.2 | 36.893 | 103 | 63 | 1 | 30 | 130 | 1 | 103 | 1.20e-16 | 70.9 |
| Msa0239060 | AT5G20090.1 | 36.893 | 103 | 63 | 1 | 30 | 130 | 1 | 103 | 1.20e-16 | 70.9 |
| Msa0239060 | AT5G20090.4 | 36.893 | 103 | 63 | 1 | 30 | 130 | 1 | 103 | 1.20e-16 | 70.9 |
| Msa0239060 | AT5G20090.3 | 37.363 | 91 | 57 | 0 | 30 | 120 | 1 | 91 | 2.11e-16 | 69.7 |
Find 39 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGGGTAGCGGATTTATT+TGG | 0.153946 | 2_2:-13073886 | Msa0239060:CDS |
| GAATTTGAAAATAAGTTATT+TGG | 0.168818 | 2_2:-13072764 | Msa0239060:three_prime_UTR |
| CTTCAAAGCTTCAAGCCTTT+TGG | 0.202542 | 2_2:-13076146 | Msa0239060:CDS |
| CCTCCTTCTTCTTCTTCTCT+TGG | 0.212171 | 2_2:+13076195 | None:intergenic |
| GGGAAGTAACTCACTAGTTT+TGG | 0.229828 | 2_2:+13076107 | None:intergenic |
| TTGTATGTGTCCCACTTAAT+TGG | 0.241156 | 2_2:+13072730 | None:intergenic |
| CTCTTGGATTGAAATCAAAT+TGG | 0.245546 | 2_2:+13076211 | None:intergenic |
| TTTGTTGTGCAGTTCACTTT+TGG | 0.260431 | 2_2:-13074730 | Msa0239060:intron |
| CTTGCGCGAGATTTGGTATA+AGG | 0.301111 | 2_2:+13073228 | None:intergenic |
| CATGGGTAGCGGATTTATTT+GGG | 0.313191 | 2_2:-13073885 | Msa0239060:CDS |
| ATTCATTTCATTTCATTTGA+TGG | 0.322458 | 2_2:-13076172 | Msa0239060:CDS |
| TGTATGTGTCCCACTTAATT+GGG | 0.327600 | 2_2:+13072731 | None:intergenic |
| ACTGATACTTGCGCGAGATT+TGG | 0.353565 | 2_2:+13073221 | None:intergenic |
| TTTGTTAAAAGTTAGTTAGT+TGG | 0.402417 | 2_2:-13072625 | Msa0239060:three_prime_UTR |
| AGGCAGTTCCTGCCATTGTA+AGG | 0.434791 | 2_2:+13073248 | None:intergenic |
| CAACCAGCTGTCATGGGTAG+CGG | 0.453994 | 2_2:-13073896 | Msa0239060:intron |
| TTTGGGCACCTGCATTTAAG+TGG | 0.466171 | 2_2:-13074712 | Msa0239060:CDS |
| GTATGATTCAAGTATTTAAG+TGG | 0.468823 | 2_2:-13072681 | Msa0239060:three_prime_UTR |
| CATTTCATTTCATTTGATGG+TGG | 0.479702 | 2_2:-13076169 | Msa0239060:CDS |
| TGCGTAAACCTTACAATGGC+AGG | 0.480952 | 2_2:-13073256 | Msa0239060:CDS |
| GTTATACAAGTTACAAATCA+AGG | 0.509151 | 2_2:-13072599 | Msa0239060:three_prime_UTR |
| TTACAGCACTCAAATCATTC+CGG | 0.512506 | 2_2:-13073858 | Msa0239060:intron |
| TTGGGCACCTGCATTTAAGT+GGG | 0.520669 | 2_2:-13074711 | Msa0239060:CDS |
| GGATAGGAAATCTTCTCAGT+TGG | 0.527738 | 2_2:+13074653 | None:intergenic |
| GCCAATTGGATGATTCCAAA+AGG | 0.528902 | 2_2:+13076131 | None:intergenic |
| CATACTTATTTGATGAGGAT+AGG | 0.542507 | 2_2:+13074637 | None:intergenic |
| GACACATACAATTCATACAT+TGG | 0.546029 | 2_2:-13072718 | Msa0239060:three_prime_UTR |
| GCATGATCATTCCTCAAAAG+AGG | 0.555237 | 2_2:-13072811 | Msa0239060:CDS |
| AGTATGATGCCCCAATTAAG+TGG | 0.558149 | 2_2:-13072741 | Msa0239060:three_prime_UTR |
| AATCCAAGAGAAGAAGAAGA+AGG | 0.572288 | 2_2:-13076198 | Msa0239060:CDS |
| GTGATACCCCACTTAAATGC+AGG | 0.574788 | 2_2:+13074704 | None:intergenic |
| TGGGCACCTGCATTTAAGTG+GGG | 0.581238 | 2_2:-13074710 | Msa0239060:CDS |
| TTGTAAGGTTTACGCAAACA+AGG | 0.587986 | 2_2:+13073263 | None:intergenic |
| ATGCACATACTTATTTGATG+AGG | 0.606094 | 2_2:+13074632 | None:intergenic |
| GTATGTGTCCCACTTAATTG+GGG | 0.622657 | 2_2:+13072732 | None:intergenic |
| AAAATCAGCAACATTGGCAA+CGG | 0.639076 | 2_2:+13074682 | None:intergenic |
| GTATGATGCCCCAATTAAGT+GGG | 0.639984 | 2_2:-13072740 | Msa0239060:three_prime_UTR |
| CCAAGAGAAGAAGAAGAAGG+AGG | 0.641031 | 2_2:-13076195 | Msa0239060:CDS |
| TGTTTGCGTAAACCTTACAA+TGG | 0.671351 | 2_2:-13073260 | Msa0239060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAACTTTTAAAAAAAAACA+TGG | - | chr2_2:13072547-13072566 | Msa0239060:three_prime_UTR | 10.0% |
| !!! | TATTTTATTTGTTATATTGT+TGG | + | chr2_2:13073833-13073852 | None:intergenic | 10.0% |
| !!! | TAAAAAAATGTAATCTATTT+TGG | + | chr2_2:13074323-13074342 | None:intergenic | 10.0% |
| !! | ACAATAGTAAAATATAAAAC+AGG | - | chr2_2:13072919-13072938 | Msa0239060:intron | 15.0% |
| !! | ACAAGTTAGTAATATTAATT+AGG | - | chr2_2:13073356-13073375 | Msa0239060:intron | 15.0% |
| !! | CAAGTTAGTAATATTAATTA+GGG | - | chr2_2:13073357-13073376 | Msa0239060:intron | 15.0% |
| !! | AAGTTAGTAATATTAATTAG+GGG | - | chr2_2:13073358-13073377 | Msa0239060:intron | 15.0% |
| !! | TTGAAAAAGAGTTTATATTT+AGG | - | chr2_2:13073418-13073437 | Msa0239060:intron | 15.0% |
| !! | TGAAAAAGAGTTTATATTTA+GGG | - | chr2_2:13073419-13073438 | Msa0239060:intron | 15.0% |
| !!! | TAAAAATTGAAGATTTTCAT+GGG | - | chr2_2:13073535-13073554 | Msa0239060:intron | 15.0% |
| !!! | ATTACAATTTAAAATAAGCA+TGG | + | chr2_2:13073774-13073793 | None:intergenic | 15.0% |
| !!! | TTTGATTTCTTCAAAAAAAA+TGG | + | chr2_2:13073909-13073928 | None:intergenic | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+AGG | + | chr2_2:13074759-13074778 | None:intergenic | 15.0% |
| !! | TTTGAAAATATAAAACTTAC+CGG | + | chr2_2:13075342-13075361 | None:intergenic | 15.0% |
| !! | ATGAAATATTGAAAATTTAG+TGG | - | chr2_2:13075385-13075404 | Msa0239060:intron | 15.0% |
| !! | ATAACACAAAATTATATCAA+TGG | + | chr2_2:13076283-13076302 | None:intergenic | 15.0% |
| !!! | ATTGATATAATTTTGTGTTA+TGG | - | chr2_2:13076282-13076301 | Msa0239060:intron | 15.0% |
| !! | GAATTTGAAAATAAGTTATT+TGG | - | chr2_2:13076414-13076433 | Msa0239060:intron | 15.0% |
| !! | GAAACCAAAAAGTTAAAATT+TGG | - | chr2_2:13072631-13072650 | Msa0239060:three_prime_UTR | 20.0% |
| !! | ATTCATTTCATTTCATTTGA+TGG | - | chr2_2:13073006-13073025 | Msa0239060:intron | 20.0% |
| !! | TATTGCAATAAAACTCAAAA+GGG | + | chr2_2:13073094-13073113 | None:intergenic | 20.0% |
| !! | ATATTGCAATAAAACTCAAA+AGG | + | chr2_2:13073095-13073114 | None:intergenic | 20.0% |
| !! | TATCAAAGATGTAGAATAAT+AGG | - | chr2_2:13073139-13073158 | Msa0239060:intron | 20.0% |
| !! | ATCAAAGATGTAGAATAATA+GGG | - | chr2_2:13073140-13073159 | Msa0239060:intron | 20.0% |
| !! | ACTATTAAGTAATATGCTTT+GGG | + | chr2_2:13073510-13073529 | None:intergenic | 20.0% |
| !! | TACTATTAAGTAATATGCTT+TGG | + | chr2_2:13073511-13073530 | None:intergenic | 20.0% |
| !!! | GTAAAAATTGAAGATTTTCA+TGG | - | chr2_2:13073534-13073553 | Msa0239060:intron | 20.0% |
| !!! | ACAATTTGTTTTTGTTTTGA+AGG | + | chr2_2:13073583-13073602 | None:intergenic | 20.0% |
| !! | TAAATTGTAATAAAGCATGT+TGG | - | chr2_2:13073783-13073802 | Msa0239060:intron | 20.0% |
| !!! | TATTTAGACTGATTTTTCAT+TGG | + | chr2_2:13074002-13074021 | None:intergenic | 20.0% |
| !!! | TTTTGAGAAAAAGAAAAAAG+TGG | + | chr2_2:13074692-13074711 | None:intergenic | 20.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | + | chr2_2:13074734-13074753 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | + | chr2_2:13074770-13074789 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | + | chr2_2:13074771-13074790 | None:intergenic | 20.0% |
| !! | TTCACTAACTACAATTAATA+AGG | - | chr2_2:13074801-13074820 | Msa0239060:intron | 20.0% |
| !! | TCACTAACTACAATTAATAA+GGG | - | chr2_2:13074802-13074821 | Msa0239060:intron | 20.0% |
| !!! | ATTAATTGTGTTGATTTTGA+TGG | + | chr2_2:13074854-13074873 | None:intergenic | 20.0% |
| !! | AAGTTAGTTACATATTAGTT+AGG | - | chr2_2:13074935-13074954 | Msa0239060:intron | 20.0% |
| !! | AACATAATTAGACTATAACT+TGG | - | chr2_2:13075540-13075559 | Msa0239060:intron | 20.0% |
| !! | AGATAATGTAAACAAAAGTA+AGG | + | chr2_2:13075645-13075664 | None:intergenic | 20.0% |
| !!! | AACATAAGGTTTTAATCTTT+TGG | + | chr2_2:13075721-13075740 | None:intergenic | 20.0% |
| !!! | TTGATGTTCCAAATATTTTT+TGG | + | chr2_2:13076103-13076122 | None:intergenic | 20.0% |
| !!! | TTAAGTTTATTTTCTTTGAG+AGG | - | chr2_2:13076147-13076166 | Msa0239060:CDS | 20.0% |
| !!! | TAATTTTGTGTTATGGATTT+TGG | - | chr2_2:13076289-13076308 | Msa0239060:intron | 20.0% |
| !!! | AACTAACTTTTAACAAACAT+AGG | + | chr2_2:13076550-13076569 | None:intergenic | 20.0% |
| !! | TTTGTTAAAAGTTAGTTAGT+TGG | - | chr2_2:13076553-13076572 | Msa0239060:intron | 20.0% |
| !!! | GAGACCAAATTTTAACTTTT+TGG | + | chr2_2:13072638-13072657 | None:intergenic | 25.0% |
| ! | AAATAGAGAAGAGAGAAATA+GGG | + | chr2_2:13072736-13072755 | None:intergenic | 25.0% |
| ! | CGCAAATTAATTGGTTAATA+CGG | - | chr2_2:13072848-13072867 | Msa0239060:intron | 25.0% |
| ! | AAATTAATTGGTTAATACGG+AGG | - | chr2_2:13072851-13072870 | Msa0239060:intron | 25.0% |
| ! | AAACATCATTCATCTATCTA+CGG | + | chr2_2:13072894-13072913 | None:intergenic | 25.0% |
| !! | TCTTTGATAATAATAAGTCC+AGG | + | chr2_2:13073128-13073147 | None:intergenic | 25.0% |
| ! | AGAAATGTGAAAAAAGCAAA+GGG | + | chr2_2:13073233-13073252 | None:intergenic | 25.0% |
| ! | AAGAAATGTGAAAAAAGCAA+AGG | + | chr2_2:13073234-13073253 | None:intergenic | 25.0% |
| ! | CATACAAACAAAGAACAATT+TGG | + | chr2_2:13073307-13073326 | None:intergenic | 25.0% |
| ! | GGGACAAAAATAAAGTTAAA+TGG | - | chr2_2:13073439-13073458 | Msa0239060:intron | 25.0% |
| ! | AAAGTTAAATGGATGTTTGA+CGG | - | chr2_2:13073450-13073469 | Msa0239060:intron | 25.0% |
| ! | AGCATATTACTTAATAGTAG+AGG | - | chr2_2:13073512-13073531 | Msa0239060:intron | 25.0% |
| ! | TACCAATACAATATTTCCAT+CGG | - | chr2_2:13073640-13073659 | Msa0239060:intron | 25.0% |
| !! | ATTAAGGGTAAGTTTGTTTA+AGG | + | chr2_2:13074026-13074045 | None:intergenic | 25.0% |
| ! | AACAAAAGTGGTCAATTAAA+TGG | + | chr2_2:13074434-13074453 | None:intergenic | 25.0% |
| !! | TTTTGTAAAATCAGCAACAT+TGG | + | chr2_2:13074505-13074524 | None:intergenic | 25.0% |
| ! | CTCTAAATAATAGTCGTTTA+AGG | + | chr2_2:13074902-13074921 | None:intergenic | 25.0% |
| ! | AAACGACTATTATTTAGAGA+CGG | - | chr2_2:13074903-13074922 | Msa0239060:intron | 25.0% |
| !! | ACAAATACACATTTTCACAA+GGG | + | chr2_2:13075122-13075141 | None:intergenic | 25.0% |
| ! | TAGCATATATTCTCTTGTAT+TGG | - | chr2_2:13075219-13075238 | Msa0239060:intron | 25.0% |
| ! | AGCATATATTCTCTTGTATT+GGG | - | chr2_2:13075220-13075239 | Msa0239060:intron | 25.0% |
| !!! | ATTGAAAATTTAGTGGATTG+AGG | - | chr2_2:13075392-13075411 | Msa0239060:intron | 25.0% |
| ! | TATCATTACATTATCTCTCT+TGG | - | chr2_2:13075483-13075502 | Msa0239060:intron | 25.0% |
| ! | TTAACACTAACTTCAACATA+AGG | + | chr2_2:13075735-13075754 | None:intergenic | 25.0% |
| ! | AGTATACCAGAATTTAATCT+CGG | - | chr2_2:13075760-13075779 | Msa0239060:intron | 25.0% |
| !! | TTCCAATTTTGCAGAAAAAT+TGG | - | chr2_2:13075890-13075909 | Msa0239060:intron | 25.0% |
| !! | TTCCAATTTTTCTGCAAAAT+TGG | + | chr2_2:13075895-13075914 | None:intergenic | 25.0% |
| !!! | AATATTTTTTGGCCTAGTAA+GGG | + | chr2_2:13076092-13076111 | None:intergenic | 25.0% |
| !!! | AAATATTTTTTGGCCTAGTA+AGG | + | chr2_2:13076093-13076112 | None:intergenic | 25.0% |
| ! | TTACTAGGCCAAAAAATATT+TGG | - | chr2_2:13076092-13076111 | Msa0239060:intron | 25.0% |
| !!! | TTTATTTTCTTTGAGAGGAT+TGG | - | chr2_2:13076152-13076171 | Msa0239060:CDS | 25.0% |
| !! | TTCATATTCTGACATTTTTC+CGG | - | chr2_2:13076192-13076211 | Msa0239060:CDS | 25.0% |
| !! | CATTGTAATTGTATTTTGTC+CGG | + | chr2_2:13076214-13076233 | None:intergenic | 25.0% |
| ! | GTATGATTCAAGTATTTAAG+TGG | - | chr2_2:13076497-13076516 | Msa0239060:intron | 25.0% |
| ! | GTTATACAAGTTACAAATCA+AGG | - | chr2_2:13076579-13076598 | Msa0239060:intron | 25.0% |
| AATAGAGAAGAGAGAAATAG+GGG | + | chr2_2:13072735-13072754 | None:intergenic | 30.0% | |
| GAAATAGAGAAGAGAGAAAT+AGG | + | chr2_2:13072737-13072756 | None:intergenic | 30.0% | |
| ! | ATAAGGATGCTCAATCTTTT+TGG | + | chr2_2:13072785-13072804 | None:intergenic | 30.0% |
| CTCTTGGATTGAAATCAAAT+TGG | + | chr2_2:13072970-13072989 | None:intergenic | 30.0% | |
| CATTTCATTTCATTTGATGG+TGG | - | chr2_2:13073009-13073028 | Msa0239060:intron | 30.0% | |
| AAGGGCTACAAATTTAAAAG+AGG | + | chr2_2:13073174-13073193 | None:intergenic | 30.0% | |
| AAATGTGAAAAAAGCAAAGG+GGG | + | chr2_2:13073231-13073250 | None:intergenic | 30.0% | |
| GAAATGTGAAAAAAGCAAAG+GGG | + | chr2_2:13073232-13073251 | None:intergenic | 30.0% | |
| AACCGATGGAAATATTGTAT+TGG | + | chr2_2:13073645-13073664 | None:intergenic | 30.0% | |
| ! | ATACAATATTTCCATCGGTT+AGG | - | chr2_2:13073645-13073664 | Msa0239060:intron | 30.0% |
| TTAAAGCAAGTGACATAACA+TGG | + | chr2_2:13074291-13074310 | None:intergenic | 30.0% | |
| ACGAAACAACAATTTGAATC+AGG | + | chr2_2:13074346-13074365 | None:intergenic | 30.0% | |
| !! | TCAATTAAATGGATTGATGC+AGG | + | chr2_2:13074423-13074442 | None:intergenic | 30.0% |
| CATACTTATTTGATGAGGAT+AGG | + | chr2_2:13074544-13074563 | None:intergenic | 30.0% | |
| ATGCACATACTTATTTGATG+AGG | + | chr2_2:13074549-13074568 | None:intergenic | 30.0% | |
| AAGAGACAATTATTGTGAGA+CGG | + | chr2_2:13074667-13074686 | None:intergenic | 30.0% | |
| AGTTAGTGAAGTAGTTAAGT+TGG | + | chr2_2:13074791-13074810 | None:intergenic | 30.0% | |
| AGGTTTATGCACGATTATTA+AGG | + | chr2_2:13074882-13074901 | None:intergenic | 30.0% | |
| CGTATTAGTTAGAGATTAGT+TGG | + | chr2_2:13075064-13075083 | None:intergenic | 30.0% | |
| ! | CACAAATACACATTTTCACA+AGG | + | chr2_2:13075123-13075142 | None:intergenic | 30.0% |
| CTTGTGAAAATGTGTATTTG+TGG | - | chr2_2:13075121-13075140 | Msa0239060:intron | 30.0% | |
| ! | GTATTTGTGGATTTTCTGAA+AGG | - | chr2_2:13075134-13075153 | Msa0239060:intron | 30.0% |
| ! | ATCTTTTTGTCCGTAATCTT+TGG | - | chr2_2:13075601-13075620 | Msa0239060:intron | 30.0% |
| CTAAGAGAAACCAAAGATTA+CGG | + | chr2_2:13075614-13075633 | None:intergenic | 30.0% | |
| CAGGCAAACATATATATACA+GGG | + | chr2_2:13075698-13075717 | None:intergenic | 30.0% | |
| !! | TAAGGTTTTAATCTTTTGGC+AGG | + | chr2_2:13075717-13075736 | None:intergenic | 30.0% |
| TGTTAACCGAGATTAAATTC+TGG | + | chr2_2:13075769-13075788 | None:intergenic | 30.0% | |
| GAATTTAATCTCGGTTAACA+TGG | - | chr2_2:13075769-13075788 | Msa0239060:intron | 30.0% | |
| ACTTTATGATTCGATGTTCA+TGG | - | chr2_2:13076032-13076051 | Msa0239060:intron | 30.0% | |
| ! | TTCATGGACTGAAAAATATG+TGG | - | chr2_2:13076048-13076067 | Msa0239060:intron | 30.0% |
| !! | AATATGTGGTTGATGAGATT+AGG | - | chr2_2:13076062-13076081 | Msa0239060:intron | 30.0% |
| CAAGGTTAATCTACAAAAGA+AGG | + | chr2_2:13076252-13076271 | None:intergenic | 30.0% | |
| AGTTAATATACGTATCACCA+TGG | + | chr2_2:13076330-13076349 | None:intergenic | 30.0% | |
| GACACATACAATTCATACAT+TGG | - | chr2_2:13076460-13076479 | Msa0239060:intron | 30.0% | |
| ACATAGAAGAAAAGAGAGAG+GGG | + | chr2_2:13072603-13072622 | None:intergenic | 35.0% | |
| CACATAGAAGAAAAGAGAGA+GGG | + | chr2_2:13072604-13072623 | None:intergenic | 35.0% | |
| TCACATAGAAGAAAAGAGAG+AGG | + | chr2_2:13072605-13072624 | None:intergenic | 35.0% | |
| ! | CTCTCTTTTCTTCTATGTGA+TGG | - | chr2_2:13072605-13072624 | Msa0239060:three_prime_UTR | 35.0% |
| GCATTTCTTCAGTTTGGTAA+AGG | + | chr2_2:13072686-13072705 | None:intergenic | 35.0% | |
| GATTGTGCATTTCTTCAGTT+TGG | + | chr2_2:13072692-13072711 | None:intergenic | 35.0% | |
| !!! | ACACTTTGTTTTGACGGATA+AGG | + | chr2_2:13072802-13072821 | None:intergenic | 35.0% |
| !!! | GTCAACACACTTTGTTTTGA+CGG | + | chr2_2:13072808-13072827 | None:intergenic | 35.0% |
| ATCATTCATCTATCTACGGA+AGG | + | chr2_2:13072890-13072909 | None:intergenic | 35.0% | |
| AATCCAAGAGAAGAAGAAGA+AGG | - | chr2_2:13072980-13072999 | Msa0239060:intron | 35.0% | |
| !!! | GAAGTAACTCACTAGTTTTG+GGG | + | chr2_2:13073072-13073091 | None:intergenic | 35.0% |
| !!! | GGAAGTAACTCACTAGTTTT+GGG | + | chr2_2:13073073-13073092 | None:intergenic | 35.0% |
| TGCAATATCTTGATCAAACC+TGG | - | chr2_2:13073107-13073126 | Msa0239060:intron | 35.0% | |
| GGGAGTAAAACTTTGTTCAA+GGG | + | chr2_2:13073192-13073211 | None:intergenic | 35.0% | |
| AGGGAGTAAAACTTTGTTCA+AGG | + | chr2_2:13073193-13073212 | None:intergenic | 35.0% | |
| TTAAATGGATGTTTGACGGA+GGG | - | chr2_2:13073454-13073473 | Msa0239060:intron | 35.0% | |
| ! | ATATTTCCATCGGTTAGGTA+TGG | - | chr2_2:13073650-13073669 | Msa0239060:intron | 35.0% |
| ! | TATTTCCATCGGTTAGGTAT+GGG | - | chr2_2:13073651-13073670 | Msa0239060:intron | 35.0% |
| !!! | GGTTTTATTTTTCACCAGCT+TGG | - | chr2_2:13073679-13073698 | Msa0239060:intron | 35.0% |
| CTTCAAAAAAAATGGCAGCA+GGG | + | chr2_2:13073901-13073920 | None:intergenic | 35.0% | |
| TCTTCAAAAAAAATGGCAGC+AGG | + | chr2_2:13073902-13073921 | None:intergenic | 35.0% | |
| ! | CTGAAGGGTAAGTTTGTTTA+GGG | - | chr2_2:13073965-13073984 | Msa0239060:intron | 35.0% |
| TGTGTATGTCATGTCAGAAT+TGG | - | chr2_2:13074113-13074132 | Msa0239060:intron | 35.0% | |
| GTGTGATTATGTCAAATCGA+CGG | - | chr2_2:13074219-13074238 | Msa0239060:intron | 35.0% | |
| TTACTTCATATCCAAACTGC+AGG | - | chr2_2:13074255-13074274 | Msa0239060:intron | 35.0% | |
| !! | TTTGTTGTGCAGTTCACTTT+TGG | - | chr2_2:13074448-13074467 | Msa0239060:intron | 35.0% |
| !! | TTGTTGTGCAGTTCACTTTT+GGG | - | chr2_2:13074449-13074468 | Msa0239060:intron | 35.0% |
| AAAATCAGCAACATTGGCAA+CGG | + | chr2_2:13074499-13074518 | None:intergenic | 35.0% | |
| GACTATTATTTAGAGACGGA+GGG | - | chr2_2:13074907-13074926 | Msa0239060:intron | 35.0% | |
| !! | TAGGAGTTAGTTTGTCCAAT+TGG | - | chr2_2:13074954-13074973 | Msa0239060:intron | 35.0% |
| TTGTCCAATTGGCTATATGA+CGG | - | chr2_2:13074965-13074984 | Msa0239060:intron | 35.0% | |
| TATTCATCACTGAAAGGGAT+TGG | - | chr2_2:13074989-13075008 | Msa0239060:intron | 35.0% | |
| ATATTCACGTTGGGTACAAT+TGG | - | chr2_2:13075037-13075056 | Msa0239060:intron | 35.0% | |
| TTACAGCACTCAAATCATTC+CGG | - | chr2_2:13075320-13075339 | Msa0239060:intron | 35.0% | |
| !! | TTAGTGGATTGAGGATCATT+TGG | - | chr2_2:13075401-13075420 | Msa0239060:intron | 35.0% |
| AGATTATGTGTGCATGATTC+TGG | - | chr2_2:13075458-13075477 | Msa0239060:intron | 35.0% | |
| !!! | TGCAATGCAGTAGCTTTTTT+TGG | - | chr2_2:13075574-13075593 | Msa0239060:intron | 35.0% |
| GCAGGCAAACATATATATAC+AGG | + | chr2_2:13075699-13075718 | None:intergenic | 35.0% | |
| CACTAACATATCAGGATCAT+GGG | + | chr2_2:13075862-13075881 | None:intergenic | 35.0% | |
| TTGTAAGGTTTACGCAAACA+AGG | + | chr2_2:13075918-13075937 | None:intergenic | 35.0% | |
| TGTTTGCGTAAACCTTACAA+TGG | - | chr2_2:13075918-13075937 | Msa0239060:intron | 35.0% | |
| ATATCAATGGCTATCACACA+AGG | + | chr2_2:13076270-13076289 | None:intergenic | 35.0% | |
| TAATATACGTATCACCATGG+AGG | + | chr2_2:13076327-13076346 | None:intergenic | 35.0% | |
| TGTATGTGTCCCACTTAATT+GGG | + | chr2_2:13076450-13076469 | None:intergenic | 35.0% | |
| TTGTATGTGTCCCACTTAAT+TGG | + | chr2_2:13076451-13076470 | None:intergenic | 35.0% | |
| CATAGAAGAAAAGAGAGAGG+GGG | + | chr2_2:13072602-13072621 | None:intergenic | 40.0% | |
| GAGAAGTCAGAGAGAGAAAT+AGG | + | chr2_2:13072662-13072681 | None:intergenic | 40.0% | |
| ! | CAAAACAAAGTGTGTTGACC+TGG | - | chr2_2:13072809-13072828 | Msa0239060:CDS | 40.0% |
| !! | CCAATTAATTTGCGACACGT+GGG | + | chr2_2:13072842-13072861 | None:intergenic | 40.0% |
| !! | ACCAATTAATTTGCGACACG+TGG | + | chr2_2:13072843-13072862 | None:intergenic | 40.0% |
| TCATCTATCTACGGAAGGAT+GGG | + | chr2_2:13072885-13072904 | None:intergenic | 40.0% | |
| TTCATCTATCTACGGAAGGA+TGG | + | chr2_2:13072886-13072905 | None:intergenic | 40.0% | |
| ! | CTTCAAAGCTTCAAGCCTTT+TGG | - | chr2_2:13073032-13073051 | Msa0239060:intron | 40.0% |
| !!! | GCCTTTTGGAATCATCCAAT+TGG | - | chr2_2:13073046-13073065 | Msa0239060:intron | 40.0% |
| GCCAATTGGATGATTCCAAA+AGG | + | chr2_2:13073050-13073069 | None:intergenic | 40.0% | |
| !! | GGGAAGTAACTCACTAGTTT+TGG | + | chr2_2:13073074-13073093 | None:intergenic | 40.0% |
| ! | AAAGCAAAGGGGGTACATTA+AGG | + | chr2_2:13073221-13073240 | None:intergenic | 40.0% |
| GTTAAATGGATGTTTGACGG+AGG | - | chr2_2:13073453-13073472 | Msa0239060:intron | 40.0% | |
| ! | GACGGAGGGAGTATATTATA+CGG | - | chr2_2:13073468-13073487 | Msa0239060:intron | 40.0% |
| ! | ATTTCCATCGGTTAGGTATG+GGG | - | chr2_2:13073652-13073671 | Msa0239060:intron | 40.0% |
| ! | TTTTTCACCAGCTTGGAGAT+TGG | - | chr2_2:13073686-13073705 | Msa0239060:intron | 40.0% |
| ! | TTTTCACCAGCTTGGAGATT+GGG | - | chr2_2:13073687-13073706 | Msa0239060:intron | 40.0% |
| AAATAAGCATGGCAGTAGAG+CGG | + | chr2_2:13073763-13073782 | None:intergenic | 40.0% | |
| AACAAACTTACCCTTCAGCA+TGG | + | chr2_2:13073963-13073982 | None:intergenic | 40.0% | |
| ! | GCTGAAGGGTAAGTTTGTTT+AGG | - | chr2_2:13073964-13073983 | Msa0239060:intron | 40.0% |
| GCTGTGTGACAGTTACATTA+GGG | + | chr2_2:13074142-13074161 | None:intergenic | 40.0% | |
| AGCTGTGTGACAGTTACATT+AGG | + | chr2_2:13074143-13074162 | None:intergenic | 40.0% | |
| ATCACACAGTCAGTTTCACA+TGG | + | chr2_2:13074206-13074225 | None:intergenic | 40.0% | |
| CTAACACTTGACAACAACGT+TGG | + | chr2_2:13074384-13074403 | None:intergenic | 40.0% | |
| AGTGAACTGCACAACAAAAG+TGG | + | chr2_2:13074446-13074465 | None:intergenic | 40.0% | |
| GGATAGGAAATCTTCTCAGT+TGG | + | chr2_2:13074528-13074547 | None:intergenic | 40.0% | |
| GACAATTATTGTGAGACGGA+GGG | + | chr2_2:13074663-13074682 | None:intergenic | 40.0% | |
| AGACAATTATTGTGAGACGG+AGG | + | chr2_2:13074664-13074683 | None:intergenic | 40.0% | |
| CGACTATTATTTAGAGACGG+AGG | - | chr2_2:13074906-13074925 | Msa0239060:intron | 40.0% | |
| TGTCCAATTGGCTATATGAC+GGG | - | chr2_2:13074966-13074985 | Msa0239060:intron | 40.0% | |
| ATACCCGTCATATAGCCAAT+TGG | + | chr2_2:13074972-13074991 | None:intergenic | 40.0% | |
| ACGGGTATTCATCACTGAAA+GGG | - | chr2_2:13074984-13075003 | Msa0239060:intron | 40.0% | |
| TCACTGAAAGGGATTGGAAT+TGG | - | chr2_2:13074995-13075014 | Msa0239060:intron | 40.0% | |
| CACTGAAAGGGATTGGAATT+GGG | - | chr2_2:13074996-13075015 | Msa0239060:intron | 40.0% | |
| GACAGCTGGTTGAAAACAAA+AGG | + | chr2_2:13075274-13075293 | None:intergenic | 40.0% | |
| ! | TTGTTTTCAACCAGCTGTCA+TGG | - | chr2_2:13075275-13075294 | Msa0239060:intron | 40.0% |
| ! | TGTTTTCAACCAGCTGTCAT+GGG | - | chr2_2:13075276-13075295 | Msa0239060:intron | 40.0% |
| !! | TCATGGGTAGCGGATTTATT+TGG | - | chr2_2:13075292-13075311 | Msa0239060:intron | 40.0% |
| !! | CATGGGTAGCGGATTTATTT+GGG | - | chr2_2:13075293-13075312 | Msa0239060:intron | 40.0% |
| CGGTTAACATGGCAACATTT+AGG | - | chr2_2:13075780-13075799 | Msa0239060:intron | 40.0% | |
| CCACTAACATATCAGGATCA+TGG | + | chr2_2:13075863-13075882 | None:intergenic | 40.0% | |
| CCATGATCCTGATATGTTAG+TGG | - | chr2_2:13075860-13075879 | Msa0239060:intron | 40.0% | |
| GTAGTTGCCACTAACATATC+AGG | + | chr2_2:13075870-13075889 | None:intergenic | 40.0% | |
| !! | TGTGGTTGATGAGATTAGGT+TGG | - | chr2_2:13076066-13076085 | Msa0239060:intron | 40.0% |
| ! | TAACTTGCGATCTACTTCTC+AGG | - | chr2_2:13076345-13076364 | Msa0239060:intron | 40.0% |
| GCATGATCATTCCTCAAAAG+AGG | - | chr2_2:13076367-13076386 | Msa0239060:intron | 40.0% | |
| ! | TTTTGCTACGACCTCTTTTG+AGG | + | chr2_2:13076381-13076400 | None:intergenic | 40.0% |
| AGTATGATGCCCCAATTAAG+TGG | - | chr2_2:13076437-13076456 | Msa0239060:intron | 40.0% | |
| GTATGATGCCCCAATTAAGT+GGG | - | chr2_2:13076438-13076457 | Msa0239060:intron | 40.0% | |
| GTATGTGTCCCACTTAATTG+GGG | + | chr2_2:13076449-13076468 | None:intergenic | 40.0% | |
| CCCACGTGTCGCAAATTAAT+TGG | - | chr2_2:13072839-13072858 | Msa0239060:intron | 45.0% | |
| CCTCCTTCTTCTTCTTCTCT+TGG | + | chr2_2:13072986-13073005 | None:intergenic | 45.0% | |
| CCAAGAGAAGAAGAAGAAGG+AGG | - | chr2_2:13072983-13073002 | Msa0239060:intron | 45.0% | |
| !!! | TCACTAGTTTTGGGGCCAAT+TGG | + | chr2_2:13073064-13073083 | None:intergenic | 45.0% |
| GGGGTACATTAAGGAACAGA+GGG | + | chr2_2:13073212-13073231 | None:intergenic | 45.0% | |
| CAAAAAAAATGGCAGCAGGG+CGG | + | chr2_2:13073898-13073917 | None:intergenic | 45.0% | |
| AGCCGTTCAATCTGGATTGT+CGG | - | chr2_2:13074166-13074185 | Msa0239060:intron | 45.0% | |
| AGCCGACAATCCAGATTGAA+CGG | + | chr2_2:13074171-13074190 | None:intergenic | 45.0% | |
| !! | TTGACAACAACGTTGGTGAC+TGG | + | chr2_2:13074377-13074396 | None:intergenic | 45.0% |
| TTTGGGCACCTGCATTTAAG+TGG | - | chr2_2:13074466-13074485 | Msa0239060:intron | 45.0% | |
| TTGGGCACCTGCATTTAAGT+GGG | - | chr2_2:13074467-13074486 | Msa0239060:intron | 45.0% | |
| GTGATACCCCACTTAAATGC+AGG | + | chr2_2:13074477-13074496 | None:intergenic | 45.0% | |
| GACGGGTATTCATCACTGAA+AGG | - | chr2_2:13074983-13075002 | Msa0239060:intron | 45.0% | |
| AGCGTCAGAGATATTCACGT+TGG | - | chr2_2:13075027-13075046 | Msa0239060:intron | 45.0% | |
| GCGTCAGAGATATTCACGTT+GGG | - | chr2_2:13075028-13075047 | Msa0239060:intron | 45.0% | |
| AGGAATCAGCAATGCACAGA+TGG | + | chr2_2:13075254-13075273 | None:intergenic | 45.0% | |
| TGCGTAAACCTTACAATGGC+AGG | - | chr2_2:13075922-13075941 | Msa0239060:intron | 45.0% | |
| ! | CTTGCGCGAGATTTGGTATA+AGG | + | chr2_2:13075953-13075972 | None:intergenic | 45.0% |
| ACTGATACTTGCGCGAGATT+TGG | + | chr2_2:13075960-13075979 | None:intergenic | 45.0% | |
| !! | AGATTAGGTTGGCCCTTACT+AGG | - | chr2_2:13076077-13076096 | Msa0239060:intron | 45.0% |
| ! | GGTACTGTTTTGTACCTCCA+TGG | - | chr2_2:13076310-13076329 | Msa0239060:intron | 45.0% |
| !! | TAATATATTTGTAAAATTAA+GGG | + | chr2_2:13074041-13074060 | None:intergenic | 5.0% |
| !! | ATAATATATTTGTAAAATTA+AGG | + | chr2_2:13074042-13074061 | None:intergenic | 5.0% |
| TAGGGGAGAGAGAGAGATAG+AGG | + | chr2_2:13072718-13072737 | None:intergenic | 50.0% | |
| ! | GGGGGTACATTAAGGAACAG+AGG | + | chr2_2:13073213-13073232 | None:intergenic | 50.0% |
| TGGAGATTGGGACGAGTACA+AGG | - | chr2_2:13073699-13073718 | Msa0239060:intron | 50.0% | |
| AAGGATACCTGAACCCCATC+AGG | - | chr2_2:13073718-13073737 | Msa0239060:intron | 50.0% | |
| TGGGCACCTGCATTTAAGTG+GGG | - | chr2_2:13074468-13074487 | Msa0239060:intron | 50.0% | |
| ! | TAACGAGCAAAAAAGCGCGC+AGG | + | chr2_2:13074627-13074646 | None:intergenic | 50.0% |
| AGGCAGTTCCTGCCATTGTA+AGG | + | chr2_2:13075933-13075952 | None:intergenic | 50.0% | |
| !! | GAGAGAGGGGGCTAGCTAAT+TGG | + | chr2_2:13072590-13072609 | None:intergenic | 55.0% |
| ! | CATCGGTTAGGTATGGGGCT+GGG | - | chr2_2:13073657-13073676 | Msa0239060:intron | 55.0% |
| ATCGGTTAGGTATGGGGCTG+GGG | - | chr2_2:13073658-13073677 | Msa0239060:intron | 55.0% | |
| ACTCGTCCCAATCTCCAAGC+TGG | + | chr2_2:13073696-13073715 | None:intergenic | 55.0% | |
| ACCTGAACCCCATCAGGTTC+AGG | - | chr2_2:13073724-13073743 | Msa0239060:intron | 55.0% | |
| CCTGAACCCCATCAGGTTCA+GGG | - | chr2_2:13073725-13073744 | Msa0239060:intron | 55.0% | |
| AACCCCATCAGGTTCAGGGA+CGG | - | chr2_2:13073729-13073748 | Msa0239060:intron | 55.0% | |
| TTCCCGTCCCTGAACCTGAT+GGG | + | chr2_2:13073735-13073754 | None:intergenic | 55.0% | |
| TACCCTTCAGCATGGCAGCA+GGG | + | chr2_2:13073955-13073974 | None:intergenic | 55.0% | |
| TTACCCTTCAGCATGGCAGC+AGG | + | chr2_2:13073956-13073975 | None:intergenic | 55.0% | |
| CAGCTCTCAGCCGTTCAATC+TGG | - | chr2_2:13074158-13074177 | Msa0239060:intron | 55.0% | |
| GATCGCAATCGCCTGCAGTT+TGG | + | chr2_2:13074269-13074288 | None:intergenic | 55.0% | |
| CAACCAGCTGTCATGGGTAG+CGG | - | chr2_2:13075282-13075301 | Msa0239060:intron | 55.0% | |
| AATCCGCTACCCATGACAGC+TGG | + | chr2_2:13075288-13075307 | None:intergenic | 55.0% | |
| CGACACGTGGGATTCAAGCC+AGG | + | chr2_2:13072830-13072849 | None:intergenic | 60.0% | |
| CCAGCCCCATACCTAACCGA+TGG | + | chr2_2:13073659-13073678 | None:intergenic | 60.0% | |
| ! | CCATCGGTTAGGTATGGGGC+TGG | - | chr2_2:13073656-13073675 | Msa0239060:intron | 60.0% |
| CCCTGAACCTGATGGGGTTC+AGG | + | chr2_2:13073728-13073747 | None:intergenic | 60.0% | |
| ACCCCATCAGGTTCAGGGAC+GGG | - | chr2_2:13073730-13073749 | Msa0239060:intron | 60.0% | |
| TCCCGTCCCTGAACCTGATG+GGG | + | chr2_2:13073734-13073753 | None:intergenic | 60.0% | |
| CTTCCCGTCCCTGAACCTGA+TGG | + | chr2_2:13073736-13073755 | None:intergenic | 60.0% | |
| CATCAGGTTCAGGGACGGGA+AGG | - | chr2_2:13073734-13073753 | Msa0239060:intron | 60.0% | |
| AAAATGGCAGCAGGGCGGAG+CGG | + | chr2_2:13073893-13073912 | None:intergenic | 60.0% | |
| CATGGCAGCAGGGCTGAATG+TGG | + | chr2_2:13073945-13073964 | None:intergenic | 60.0% | |
| AGCCCTGCTGCCATGCTGAA+GGG | - | chr2_2:13073950-13073969 | Msa0239060:intron | 60.0% | |
| AAATGGCAGCAGGGCGGAGC+GGG | + | chr2_2:13073892-13073911 | None:intergenic | 65.0% | |
| CAGCCCTGCTGCCATGCTGA+AGG | - | chr2_2:13073949-13073968 | Msa0239060:intron | 65.0% | |
| CGGAGCGGGGACGTTGTTGC+AGG | + | chr2_2:13073878-13073897 | None:intergenic | 70.0% | |
| AATGGCAGCAGGGCGGAGCG+GGG | + | chr2_2:13073891-13073910 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 13072535 | 13076665 | 13072535 | ID=Msa0239060;Name=Msa0239060 |
| chr2_2 | mRNA | 13072535 | 13076665 | 13072535 | ID=Msa0239060-mRNA-1;Parent=Msa0239060;Name=Msa0239060-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.8|0.66|0.83|0.8|0.83|6|259|135 |
| chr2_2 | exon | 13072535 | 13072833 | 13072535 | ID=Msa0239060-mRNA-1:exon:5535;Parent=Msa0239060-mRNA-1 |
| chr2_2 | exon | 13073223 | 13073296 | 13073223 | ID=Msa0239060-mRNA-1:exon:5534;Parent=Msa0239060-mRNA-1 |
| chr2_2 | exon | 13073859 | 13073911 | 13073859 | ID=Msa0239060-mRNA-1:exon:5533;Parent=Msa0239060-mRNA-1 |
| chr2_2 | exon | 13074642 | 13074740 | 13074642 | ID=Msa0239060-mRNA-1:exon:5532;Parent=Msa0239060-mRNA-1 |
| chr2_2 | exon | 13076121 | 13076259 | 13076121 | ID=Msa0239060-mRNA-1:exon:5531;Parent=Msa0239060-mRNA-1 |
| chr2_2 | exon | 13076663 | 13076665 | 13076663 | ID=Msa0239060-mRNA-1:exon:5530;Parent=Msa0239060-mRNA-1 |
| chr2_2 | CDS | 13076663 | 13076665 | 13076663 | ID=Msa0239060-mRNA-1:cds;Parent=Msa0239060-mRNA-1 |
| chr2_2 | CDS | 13076121 | 13076259 | 13076121 | ID=Msa0239060-mRNA-1:cds;Parent=Msa0239060-mRNA-1 |
| chr2_2 | CDS | 13074642 | 13074740 | 13074642 | ID=Msa0239060-mRNA-1:cds;Parent=Msa0239060-mRNA-1 |
| chr2_2 | CDS | 13073859 | 13073911 | 13073859 | ID=Msa0239060-mRNA-1:cds;Parent=Msa0239060-mRNA-1 |
| chr2_2 | CDS | 13073223 | 13073296 | 13073223 | ID=Msa0239060-mRNA-1:cds;Parent=Msa0239060-mRNA-1 |
| chr2_2 | CDS | 13072794 | 13072833 | 13072794 | ID=Msa0239060-mRNA-1:cds;Parent=Msa0239060-mRNA-1 |
| chr2_2 | three_prime_UTR | 13072535 | 13072793 | 13072535 | ID=Msa0239060-mRNA-1:three_prime_utr;Parent=Msa0239060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
