Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436920 | XP_003610037.2 | 90.819 | 403 | 11 | 1 | 1 | 377 | 460 | 862 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436920 | sp|Q8W4P9|TT9_ARATH | 56.117 | 376 | 136 | 2 | 1 | 352 | 460 | 830 | 4.29e-144 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436920 | G7JTB0 | 90.819 | 403 | 11 | 1 | 1 | 377 | 460 | 862 | 0.0 | 743 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006850 | Msa0436920 | 0.817502 | 3.189637e-52 | -8.615850e-47 |
| Msa0015460 | Msa0436920 | -0.808478 | 3.036588e-50 | -8.615850e-47 |
| Msa0020390 | Msa0436920 | -0.819036 | 1.433590e-52 | -8.615850e-47 |
| Msa0050520 | Msa0436920 | 0.833403 | 5.441838e-56 | -8.615850e-47 |
| Msa0065010 | Msa0436920 | -0.822050 | 2.914418e-53 | -8.615850e-47 |
| Msa0090390 | Msa0436920 | -0.817573 | 3.074210e-52 | -8.615850e-47 |
| Msa0100590 | Msa0436920 | 0.832448 | 9.398343e-56 | -8.615850e-47 |
| Msa0100880 | Msa0436920 | 0.836466 | 9.206356e-57 | -8.615850e-47 |
| Msa0118540 | Msa0436920 | -0.817565 | 3.087098e-52 | -8.615850e-47 |
| Msa0127040 | Msa0436920 | -0.815856 | 7.460299e-52 | -8.615850e-47 |
| Msa0139670 | Msa0436920 | -0.803350 | 3.636048e-49 | -8.615850e-47 |
| Msa0146770 | Msa0436920 | -0.809481 | 1.852662e-50 | -8.615850e-47 |
| Msa0155880 | Msa0436920 | -0.806582 | 7.668324e-50 | -8.615850e-47 |
| Msa0189300 | Msa0436920 | -0.806790 | 6.933076e-50 | -8.615850e-47 |
| Msa0197530 | Msa0436920 | -0.836239 | 1.051650e-56 | -8.615850e-47 |
| Msa0202410 | Msa0436920 | -0.826595 | 2.488150e-54 | -8.615850e-47 |
| Msa0231100 | Msa0436920 | -0.809262 | 2.064484e-50 | -8.615850e-47 |
| Msa0231660 | Msa0436920 | -0.816830 | 4.516205e-52 | -8.615850e-47 |
| Msa0233370 | Msa0436920 | -0.806394 | 8.404422e-50 | -8.615850e-47 |
| Msa0233380 | Msa0436920 | -0.837840 | 4.099531e-57 | -8.615850e-47 |
| Msa0365860 | Msa0436920 | -0.808832 | 2.551336e-50 | -8.615850e-47 |
| Msa0384260 | Msa0436920 | 0.826850 | 2.163431e-54 | -8.615850e-47 |
| Msa0387910 | Msa0436920 | -0.835114 | 2.025330e-56 | -8.615850e-47 |
| Msa0421260 | Msa0436920 | -0.800931 | 1.143021e-48 | -8.615850e-47 |
| Msa0436190 | Msa0436920 | -0.814809 | 1.274855e-51 | -8.615850e-47 |
| Msa0436200 | Msa0436920 | -0.835978 | 1.224457e-56 | -8.615850e-47 |
| Msa0436920 | Msa0442310 | -0.800198 | 1.612442e-48 | -8.615850e-47 |
| Msa0436920 | Msa0463340 | -0.817163 | 3.803212e-52 | -8.615850e-47 |
| Msa0436920 | Msa0467220 | -0.855393 | 6.502327e-62 | -8.615850e-47 |
| Msa0436920 | Msa0481280 | -0.813029 | 3.148115e-51 | -8.615850e-47 |
| Msa0436920 | Msa0481970 | -0.804925 | 1.709299e-49 | -8.615850e-47 |
| Msa0436920 | Msa0521670 | -0.803827 | 2.894817e-49 | -8.615850e-47 |
| Msa0436920 | Msa0524290 | -0.813711 | 2.228771e-51 | -8.615850e-47 |
| Msa0436920 | Msa0524400 | -0.810408 | 1.170174e-50 | -8.615850e-47 |
| Msa0436920 | Msa0524590 | -0.849767 | 2.617548e-60 | -8.615850e-47 |
| Msa0436920 | Msa0542090 | -0.812147 | 4.907390e-51 | -8.615850e-47 |
| Msa0436920 | Msa0542130 | -0.806826 | 6.812705e-50 | -8.615850e-47 |
| Msa0436920 | Msa0554290 | -0.835136 | 1.999985e-56 | -8.615850e-47 |
| Msa0436920 | Msa0582280 | -0.800816 | 1.207027e-48 | -8.615850e-47 |
| Msa0436920 | Msa0600410 | 0.833640 | 4.749587e-56 | -8.615850e-47 |
| Msa0436920 | Msa0602370 | -0.807495 | 4.916946e-50 | -8.615850e-47 |
| Msa0436920 | Msa0605000 | -0.830399 | 3.001897e-55 | -8.615850e-47 |
| Msa0436920 | Msa0609220 | -0.809387 | 1.939986e-50 | -8.615850e-47 |
| Msa0436920 | Msa0618200 | 0.827007 | 1.983859e-54 | -8.615850e-47 |
| Msa0436920 | Msa0621080 | 0.814719 | 1.335222e-51 | -8.615850e-47 |
| Msa0436920 | Msa0643320 | -0.819414 | 1.176106e-52 | -8.615850e-47 |
| Msa0436920 | Msa0672480 | -0.805907 | 1.064113e-49 | -8.615850e-47 |
| Msa0436920 | Msa0683140 | -0.810865 | 9.320268e-51 | -8.615850e-47 |
| Msa0436920 | Msa0685140 | -0.821298 | 4.349807e-53 | -8.615850e-47 |
| Msa0436920 | Msa0689780 | -0.807594 | 4.683727e-50 | -8.615850e-47 |
| Msa0436920 | Msa0709120 | -0.800792 | 1.220680e-48 | -8.615850e-47 |
| Msa0436920 | Msa0719420 | -0.841423 | 4.795560e-58 | -8.615850e-47 |
| Msa0436920 | Msa0751010 | -0.804182 | 2.442168e-49 | -8.615850e-47 |
| Msa0436920 | Msa0763330 | -0.810122 | 1.348647e-50 | -8.615850e-47 |
| Msa0436920 | Msa0789680 | -0.840507 | 8.340098e-58 | -8.615850e-47 |
| Msa0436920 | Msa0790820 | 0.823150 | 1.617515e-53 | -8.615850e-47 |
| Msa0436920 | Msa0794050 | -0.806599 | 7.606803e-50 | -8.615850e-47 |
| Msa0436920 | Msa0802410 | -0.847521 | 1.097148e-59 | -8.615850e-47 |
| Msa0436920 | Msa0831530 | -0.808645 | 2.797973e-50 | -8.615850e-47 |
| Msa0436920 | Msa0836210 | 0.803891 | 2.807226e-49 | -8.615850e-47 |
| Msa0436920 | Msa0849110 | 0.804986 | 1.660144e-49 | -8.615850e-47 |
| Msa0436920 | Msa0879850 | -0.837035 | 6.590411e-57 | -8.615850e-47 |
| Msa0436920 | Msa0880040 | -0.817616 | 3.007418e-52 | -8.615850e-47 |
| Msa0436920 | Msa0888990 | -0.807939 | 3.956898e-50 | -8.615850e-47 |
| Msa0436920 | Msa0890550 | -0.808279 | 3.349360e-50 | -8.615850e-47 |
| Msa0436920 | Msa0944610 | -0.802088 | 6.623180e-49 | -8.615850e-47 |
| Msa0436920 | Msa0944870 | -0.800391 | 1.473198e-48 | -8.615850e-47 |
| Msa0436920 | Msa0945120 | -0.817483 | 3.222322e-52 | -8.615850e-47 |
| Msa0436920 | Msa0945440 | -0.817205 | 3.720900e-52 | -8.615850e-47 |
| Msa0436920 | Msa0951400 | -0.822638 | 2.128049e-53 | -8.615850e-47 |
| Msa0436920 | Msa0970530 | -0.802754 | 4.828510e-49 | -8.615850e-47 |
| Msa0436920 | Msa0970600 | -0.801624 | 8.246425e-49 | -8.615850e-47 |
| Msa0436920 | Msa0994370 | -0.803949 | 2.730289e-49 | -8.615850e-47 |
| Msa0436920 | Msa1034270 | -0.809900 | 1.505566e-50 | -8.615850e-47 |
| Msa0436920 | Msa1034290 | -0.826343 | 2.858571e-54 | -8.615850e-47 |
| Msa0436920 | Msa1045050 | -0.821338 | 4.257126e-53 | -8.615850e-47 |
| Msa0436920 | Msa1064250 | -0.814531 | 1.469262e-51 | -8.615850e-47 |
| Msa0436920 | Msa1068870 | -0.809803 | 1.579477e-50 | -8.615850e-47 |
| Msa0436920 | Msa1070390 | -0.811355 | 7.298427e-51 | -8.615850e-47 |
| Msa0436920 | Msa1084500 | 0.853800 | 1.880859e-61 | -8.615850e-47 |
| Msa0436920 | Msa1088290 | -0.856709 | 2.678003e-62 | -8.615850e-47 |
| Msa0436920 | Msa1098720 | 0.804156 | 2.473318e-49 | -8.615850e-47 |
| Msa0436920 | Msa1125790 | 0.861947 | 7.169097e-64 | -8.615850e-47 |
| Msa0436920 | Msa1126850 | -0.812288 | 4.572363e-51 | -8.615850e-47 |
| Msa0436920 | Msa1127540 | -0.801275 | 9.721362e-49 | -8.615850e-47 |
| Msa0436920 | Msa1132310 | -0.802068 | 6.686920e-49 | -8.615850e-47 |
| Msa0436920 | Msa1133250 | -0.811546 | 6.632054e-51 | -8.615850e-47 |
| Msa0436920 | Msa1136790 | -0.819495 | 1.127369e-52 | -8.615850e-47 |
| Msa0436920 | Msa1144040 | -0.813563 | 2.403098e-51 | -8.615850e-47 |
| Msa0436920 | Msa1158230 | -0.811704 | 6.129392e-51 | -8.615850e-47 |
| Msa0436920 | Msa1197320 | -0.815586 | 8.571211e-52 | -8.615850e-47 |
| Msa0436920 | Msa1206270 | -0.806183 | 9.307275e-50 | -8.615850e-47 |
| Msa0436920 | Msa1206290 | -0.825156 | 5.465591e-54 | -8.615850e-47 |
| Msa0436920 | Msa1219170 | -0.824709 | 6.970423e-54 | -8.615850e-47 |
| Msa0436920 | Msa1220400 | 0.859380 | 4.304227e-63 | -8.615850e-47 |
| Msa0436920 | Msa1250790 | -0.805507 | 1.290946e-49 | -8.615850e-47 |
| Msa0436920 | Msa1265590 | -0.819408 | 1.180001e-52 | -8.615850e-47 |
| Msa0436920 | Msa1265640 | 0.882092 | 1.391528e-70 | -8.615850e-47 |
| Msa0436920 | Msa1332050 | -0.813576 | 2.386745e-51 | -8.615850e-47 |
| Msa0436920 | Msa1348650 | 0.835664 | 1.471424e-56 | -8.615850e-47 |
| Msa0436920 | Msa1351540 | -0.818500 | 1.897812e-52 | -8.615850e-47 |
| Msa0436920 | Msa1364940 | -0.805812 | 1.114218e-49 | -8.615850e-47 |
| Msa0436920 | Msa1367490 | -0.823325 | 1.472221e-53 | -8.615850e-47 |
| Msa0436920 | Msa1381480 | -0.836714 | 7.959452e-57 | -8.615850e-47 |
| Msa0436920 | Msa1381650 | -0.813854 | 2.073565e-51 | -8.615850e-47 |
| Msa0436920 | Msa1405220 | -0.806116 | 9.615244e-50 | -8.615850e-47 |
| Msa0436920 | Msa1420270 | -0.812877 | 3.398862e-51 | -8.615850e-47 |
| Msa0436920 | Msa1422810 | -0.848484 | 5.952328e-60 | -8.615850e-47 |
| Msa0436920 | Msa1424620 | -0.817728 | 2.837348e-52 | -8.615850e-47 |
| Msa0436920 | Msa1443610 | -0.824175 | 9.306463e-54 | -8.615850e-47 |
| Msa0436920 | Msa1447890 | -0.805871 | 1.082757e-49 | -8.615850e-47 |
| Msa0436920 | Msa1454450 | -0.802426 | 5.641302e-49 | -8.615850e-47 |
| Msa0436920 | Msa1454950 | -0.816335 | 5.831257e-52 | -8.615850e-47 |
| Msa0436920 | Msa1454960 | -0.803169 | 3.962478e-49 | -8.615850e-47 |
| Msa0436920 | Msa1457160 | -0.802480 | 5.499061e-49 | -8.615850e-47 |
| Msa0436920 | Msa1461540 | -0.804325 | 2.280813e-49 | -8.615850e-47 |
| Msa0239060 | Msa0436920 | -0.838974 | 2.090445e-57 | -8.615850e-47 |
| Msa0262480 | Msa0436920 | -0.823753 | 1.168960e-53 | -8.615850e-47 |
| Msa0271360 | Msa0436920 | -0.820626 | 6.209421e-53 | -8.615850e-47 |
| Msa0296820 | Msa0436920 | -0.812653 | 3.804109e-51 | -8.615850e-47 |
| Msa0296980 | Msa0436920 | 0.855491 | 6.087581e-62 | -8.615850e-47 |
| Msa0300350 | Msa0436920 | -0.809285 | 2.040237e-50 | -8.615850e-47 |
| Msa0309880 | Msa0436920 | -0.809698 | 1.664031e-50 | -8.615850e-47 |
| Msa0335320 | Msa0436920 | 0.853843 | 1.828225e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436920 | MtrunA17_Chr4g0071661 | 90.819 | 403 | 11 | 1 | 1 | 377 | 417 | 819 | 0.0 | 742 |
| Msa0436920 | MtrunA17_Chr2g0298811 | 63.819 | 398 | 119 | 2 | 1 | 374 | 460 | 856 | 4.86e-175 | 509 |
| Msa0436920 | MtrunA17_Chr1g0177411 | 29.730 | 333 | 202 | 7 | 59 | 364 | 541 | 868 | 5.61e-41 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436920 | AT3G28430.1 | 56.117 | 376 | 136 | 2 | 1 | 352 | 460 | 830 | 4.37e-145 | 432 |
Find 120 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAATCTGGTTATACATTT+TGG | 0.036128 | 3_2:+90804944 | None:intergenic |
| CAAATCATTGTAAGTTATTT+TGG | 0.102469 | 3_2:-90805012 | Msa0436920:exon |
| ATCCCTTGTCAAGCTACTTT+TGG | 0.177567 | 3_2:+90809898 | None:intergenic |
| CAAAATAACTTACAATGATT+TGG | 0.210898 | 3_2:+90805013 | None:intergenic |
| CTCCCATAGTCATTTGATTT+AGG | 0.226345 | 3_2:+90805251 | None:intergenic |
| AATTGCCGTGCCCAGACTTC+TGG | 0.229956 | 3_2:-90806946 | Msa0436920:CDS |
| CCCTCATGTAAATAGATTTC+AGG | 0.241065 | 3_2:-90809668 | Msa0436920:intron |
| CCTCCTAAATCAAATGACTA+TGG | 0.249693 | 3_2:-90805254 | Msa0436920:CDS |
| GAAGATGGACATTGGCATTC+AGG | 0.276649 | 3_2:-90805202 | Msa0436920:CDS |
| CAGATTTCAGTGCCCGCCTT+TGG | 0.293650 | 3_2:+90806907 | None:intergenic |
| TACTTTCAAGCAATCTCTTC+AGG | 0.296964 | 3_2:-90805777 | Msa0436920:CDS |
| GATCTTGTAGAGGAGGTTAA+AGG | 0.306009 | 3_2:-90807562 | Msa0436920:CDS |
| AGATTTCAGTGCCCGCCTTT+GGG | 0.308067 | 3_2:+90806908 | None:intergenic |
| AAAACAAAAGGTTTGGTTGA+TGG | 0.311656 | 3_2:-90805224 | Msa0436920:CDS |
| TGTTCGGGTCGTTGCACCTT+TGG | 0.336623 | 3_2:-90805697 | Msa0436920:CDS |
| GCAATCTCTTCAGGAATATC+TGG | 0.339144 | 3_2:-90805768 | Msa0436920:CDS |
| CAACTTCAATTATTCACTCT+TGG | 0.340502 | 3_2:-90807021 | Msa0436920:CDS |
| TTCTTACTTTCAACACTTCA+AGG | 0.342789 | 3_2:+90808281 | None:intergenic |
| AAAATAACTTACAATGATTT+GGG | 0.348050 | 3_2:+90805014 | None:intergenic |
| CGTCACATATAACAGAAATA+AGG | 0.351586 | 3_2:+90807524 | None:intergenic |
| AGCTTTAGTTGGTGAGAGTT+CGG | 0.368366 | 3_2:-90809942 | Msa0436920:CDS |
| TTCCTCTATCAAGTAAGTTT+CGG | 0.372042 | 3_2:-90804837 | Msa0436920:three_prime_UTR |
| GCTTTAGTTGGTGAGAGTTC+GGG | 0.372631 | 3_2:-90809941 | Msa0436920:CDS |
| ATAAATCTATTGCAGTTTCA+AGG | 0.377038 | 3_2:+90805084 | None:intergenic |
| GTATATCTGCGGAGACACTA+TGG | 0.386710 | 3_2:-90808366 | Msa0436920:CDS |
| CATGGTTACACTTGCGGATC+CGG | 0.391183 | 3_2:-90805301 | Msa0436920:CDS |
| GTCTGGGCACGGCAATTTGC+GGG | 0.395630 | 3_2:+90806952 | None:intergenic |
| AACTTCAATTATTCACTCTT+GGG | 0.401636 | 3_2:-90807020 | Msa0436920:CDS |
| ATTGCCGTGCCCAGACTTCT+GGG | 0.403086 | 3_2:-90806945 | Msa0436920:CDS |
| CGGGTCGTTGCACCTTTGGC+TGG | 0.406720 | 3_2:-90805693 | Msa0436920:CDS |
| AGATCACCAGGAGGGTCAAT+TGG | 0.408880 | 3_2:+90806976 | None:intergenic |
| ATTCTAATAGAGGAATCTTC+AGG | 0.409171 | 3_2:+90805041 | None:intergenic |
| TTGAATTCTGATTCACTGTA+AGG | 0.410997 | 3_2:+90808313 | None:intergenic |
| GAGAATGAAAACAAAAGGTT+TGG | 0.414749 | 3_2:-90805231 | Msa0436920:CDS |
| TGAGTCTTGCAACTCAGCTT+TGG | 0.416910 | 3_2:-90805174 | Msa0436920:CDS |
| GAAGTCCCATGGAATTGTTC+GGG | 0.429634 | 3_2:-90805712 | Msa0436920:CDS |
| ATACATCAATCCCAGAAGTC+TGG | 0.432993 | 3_2:+90806935 | None:intergenic |
| AGAAGTCCCATGGAATTGTT+CGG | 0.433824 | 3_2:-90805713 | Msa0436920:CDS |
| TTCCGAAACTTACTTGATAG+AGG | 0.447263 | 3_2:+90804835 | None:intergenic |
| CCAGTTACTAATCTAAAATC+TGG | 0.447688 | 3_2:+90804931 | None:intergenic |
| AAGGTTTGGTTGATGGAAGA+TGG | 0.457311 | 3_2:-90805217 | Msa0436920:CDS |
| TTCAGTGCCCGCCTTTGGGC+CGG | 0.463013 | 3_2:+90806912 | None:intergenic |
| TTTGGGAAGTATTCTAATAG+AGG | 0.467333 | 3_2:+90805031 | None:intergenic |
| GGGTCAATTGGAGGTTGCTC+AGG | 0.468643 | 3_2:+90806988 | None:intergenic |
| TAGAGGAGGTTAAAGGCATC+TGG | 0.468862 | 3_2:-90807555 | Msa0436920:CDS |
| AAGATGGACATTGGCATTCA+GGG | 0.477639 | 3_2:-90805201 | Msa0436920:CDS |
| CTCCTAAATCAAATGACTAT+GGG | 0.477691 | 3_2:-90805253 | Msa0436920:CDS |
| TCGGAACAAATGTAAATATG+AGG | 0.477773 | 3_2:-90804818 | Msa0436920:three_prime_UTR |
| TCATAGAAGACTCAAACCTT+TGG | 0.481766 | 3_2:-90805111 | Msa0436920:CDS |
| AAATATGAGGCAATCTCATA+AGG | 0.487042 | 3_2:-90804805 | Msa0436920:three_prime_UTR |
| CCATAGTCATTTGATTTAGG+AGG | 0.494004 | 3_2:+90805254 | None:intergenic |
| CATGTATCACAGGATCAGTA+TGG | 0.494447 | 3_2:-90809724 | Msa0436920:intron |
| TATGGGAGAATGAAAACAAA+AGG | 0.499190 | 3_2:-90805236 | Msa0436920:CDS |
| TTGGTGCAGCAAGCTTTAGT+TGG | 0.499335 | 3_2:-90809953 | None:intergenic |
| CTCTTGAAAGCAACTCTACA+AGG | 0.499537 | 3_2:+90805819 | None:intergenic |
| AGGATTAAGAAAGGGTAAAG+AGG | 0.503176 | 3_2:+90805274 | None:intergenic |
| GGGAGAAAGAATGCAGGAAC+TGG | 0.504717 | 3_2:-90807173 | Msa0436920:CDS |
| CTCCCAAAAGTAGCTTGACA+AGG | 0.509751 | 3_2:-90809901 | Msa0436920:CDS |
| GAAACTTACTTGATAGAGGA+AGG | 0.510427 | 3_2:+90804839 | None:intergenic |
| GATGTATCCGGCCCAAAGGC+GGG | 0.512806 | 3_2:-90806919 | Msa0436920:CDS |
| AGTCTGGGCACGGCAATTTG+CGG | 0.513050 | 3_2:+90806951 | None:intergenic |
| TTTCTGTTATATGTGACGAA+TGG | 0.513607 | 3_2:-90807519 | Msa0436920:CDS |
| CAACGACCCGAACAATTCCA+TGG | 0.514235 | 3_2:+90805706 | None:intergenic |
| TGAATGTGTATCATCAATCC+TGG | 0.514746 | 3_2:+90805325 | None:intergenic |
| TGATTTAGGAGGATTAAGAA+AGG | 0.521460 | 3_2:+90805265 | None:intergenic |
| AGACACTATGGGACGGTGGT+TGG | 0.526314 | 3_2:-90808354 | Msa0436920:CDS |
| TTGCAACTCAGCTTTGGCGA+TGG | 0.527011 | 3_2:-90805168 | Msa0436920:CDS |
| AAAAGTAGCTTGACAAGGGA+TGG | 0.529047 | 3_2:-90809896 | Msa0436920:CDS |
| AGGGGTGAAGTTACAGATCA+AGG | 0.532159 | 3_2:+90804859 | None:intergenic |
| ATTTCAGGTCATTGATGCAT+TGG | 0.533507 | 3_2:-90808410 | Msa0436920:intron |
| CAACCTCCAATTGACCCTCC+TGG | 0.533698 | 3_2:-90806982 | Msa0436920:CDS |
| TGTAGAGTTGCTTTCAAGAG+TGG | 0.533883 | 3_2:-90805816 | Msa0436920:CDS |
| GATTTAGGAGGATTAAGAAA+GGG | 0.534512 | 3_2:+90805266 | None:intergenic |
| ACTTCTGGGATTGATGTATC+CGG | 0.534731 | 3_2:-90806931 | Msa0436920:CDS |
| TACATCAATCCCAGAAGTCT+GGG | 0.536477 | 3_2:+90806936 | None:intergenic |
| CAATTTGCGGGAAGATCACC+AGG | 0.537608 | 3_2:+90806964 | None:intergenic |
| GCGGGCACTGAAATCTGCCT+TGG | 0.538572 | 3_2:-90806901 | Msa0436920:intron |
| GAAAGGGTAAAGAGGATGAC+CGG | 0.540884 | 3_2:+90805282 | None:intergenic |
| AACTTACTTGATAGAGGAAG+GGG | 0.541463 | 3_2:+90804841 | None:intergenic |
| GAGGGATCATCATTTGATGC+GGG | 0.543424 | 3_2:-90807193 | Msa0436920:CDS |
| CAAGAGTGAATAATTGAAGT+TGG | 0.543458 | 3_2:+90807022 | None:intergenic |
| GAATGGAGAAAGTGCAAAAG+AGG | 0.549048 | 3_2:-90807502 | Msa0436920:intron |
| TGCTTCTGATCTTGTAGAGG+AGG | 0.552306 | 3_2:-90807569 | Msa0436920:CDS |
| AGATTGCTTGAAAGTAAAGA+TGG | 0.553481 | 3_2:+90805784 | None:intergenic |
| ACCTGAAATCTATTTACATG+AGG | 0.556895 | 3_2:+90809667 | None:intergenic |
| TCACCAGGAGGGTCAATTGG+AGG | 0.569858 | 3_2:+90806979 | None:intergenic |
| TCTCTTCAGGAATATCTGGC+TGG | 0.575505 | 3_2:-90805764 | Msa0436920:CDS |
| TTTGGCGATGGTTGTCGAAG+AGG | 0.576823 | 3_2:-90805156 | Msa0436920:CDS |
| TGGTGAGAGTTCGGGTGAAG+AGG | 0.576996 | 3_2:-90809933 | Msa0436920:CDS |
| TGATGTATCCGGCCCAAAGG+CGG | 0.579701 | 3_2:-90806920 | Msa0436920:CDS |
| CCTGAAATCTATTTACATGA+GGG | 0.581580 | 3_2:+90809668 | None:intergenic |
| ATTCAACATGGTTACACTTG+CGG | 0.592917 | 3_2:-90805307 | Msa0436920:CDS |
| AGAGGGATCATCATTTGATG+CGG | 0.599458 | 3_2:-90807194 | Msa0436920:CDS |
| TATAACAGAAATAAGGAAGT+CGG | 0.599592 | 3_2:+90807531 | None:intergenic |
| GCAGTTTCAAGGTTGACCAA+AGG | 0.601496 | 3_2:+90805095 | None:intergenic |
| AAGAATGCAGGAACTGGTGA+AGG | 0.602205 | 3_2:-90807167 | Msa0436920:intron |
| ATTCCATGGGACTTCTGTGA+TGG | 0.605126 | 3_2:+90805720 | None:intergenic |
| GGTTGATGGAAGATGGACAT+TGG | 0.605928 | 3_2:-90805210 | Msa0436920:CDS |
| CAGCCATCACAGAAGTCCCA+TGG | 0.607697 | 3_2:-90805723 | Msa0436920:CDS |
| TATATCTGCGGAGACACTAT+GGG | 0.607701 | 3_2:-90808365 | Msa0436920:CDS |
| CTGTGCTTCTGATCTTGTAG+AGG | 0.612331 | 3_2:-90807572 | Msa0436920:CDS |
| AAACTTACTTGATAGAGGAA+GGG | 0.612795 | 3_2:+90804840 | None:intergenic |
| TTGCCGCTCAAGTATATCTG+CGG | 0.618458 | 3_2:-90808377 | Msa0436920:CDS |
| AACGACCCGAACAATTCCAT+GGG | 0.624539 | 3_2:+90805707 | None:intergenic |
| GATTGATGTATCCGGCCCAA+AGG | 0.625032 | 3_2:-90806923 | Msa0436920:CDS |
| TGATGCGGGAGAAAGAATGC+AGG | 0.631973 | 3_2:-90807179 | Msa0436920:CDS |
| TCCCAAAAGTAGCTTGACAA+GGG | 0.642364 | 3_2:-90809900 | Msa0436920:CDS |
| CAATCCCAGAAGTCTGGGCA+CGG | 0.643555 | 3_2:+90806941 | None:intergenic |
| CATACATTGCATCCAGCCAA+AGG | 0.644698 | 3_2:+90805681 | None:intergenic |
| CCTACAGATAACACTTCAGA+GGG | 0.646355 | 3_2:-90807211 | Msa0436920:intron |
| TGAAGTTACAGATCAAGGAA+AGG | 0.658218 | 3_2:+90804864 | None:intergenic |
| GCCTACAGATAACACTTCAG+AGG | 0.662668 | 3_2:-90807212 | Msa0436920:intron |
| GAATGTGTATCATCAATCCT+GGG | 0.665397 | 3_2:+90805326 | None:intergenic |
| AGCTTGACAAGGGATGGCGC+TGG | 0.673413 | 3_2:-90809890 | Msa0436920:CDS |
| TTGCGGGAAGATCACCAGGA+GGG | 0.711345 | 3_2:+90806968 | None:intergenic |
| TCTCCGCAGATATACTTGAG+CGG | 0.711551 | 3_2:+90808374 | None:intergenic |
| TCTGCGGAGACACTATGGGA+CGG | 0.717472 | 3_2:-90808361 | Msa0436920:CDS |
| GCGGAGACACTATGGGACGG+TGG | 0.720133 | 3_2:-90808358 | Msa0436920:CDS |
| TTGATGATACACATTCAACA+TGG | 0.721399 | 3_2:-90805319 | Msa0436920:CDS |
| TTTGCGGGAAGATCACCAGG+AGG | 0.757798 | 3_2:+90806967 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCTTTGTAAAAATAATAA+AGG | - | chr3_2:90806977-90806996 | Msa0436920:CDS | 10.0% |
| !!! | TTTTTTTCAAATAATTTTGT+TGG | - | chr3_2:90809283-90809302 | Msa0436920:intron | 10.0% |
| !! | TAATATATTTGCATAGTTAA+GGG | + | chr3_2:90806733-90806752 | None:intergenic | 15.0% |
| !!! | TTCTTTTAAGTTAGATATAA+CGG | + | chr3_2:90806856-90806875 | None:intergenic | 15.0% |
| !! | TTTACAAAGAAAATCATAAA+AGG | + | chr3_2:90806969-90806988 | None:intergenic | 15.0% |
| !!! | ACATTAAAGATATCATTTTA+AGG | + | chr3_2:90807506-90807525 | None:intergenic | 15.0% |
| !!! | TATTATTTTGCATTGAAAAT+AGG | + | chr3_2:90808358-90808377 | None:intergenic | 15.0% |
| !!! | TTTATTTTTGATTTTTTCCT+TGG | - | chr3_2:90808729-90808748 | Msa0436920:intron | 15.0% |
| !! | AAAATAAAGAAGAAAATTAG+TGG | + | chr3_2:90809092-90809111 | None:intergenic | 15.0% |
| !!! | TACAAAATCATTTTCAAAAA+TGG | - | chr3_2:90809145-90809164 | Msa0436920:intron | 15.0% |
| !!! | TAATTTTTAGTATTAGTACT+TGG | - | chr3_2:90809223-90809242 | Msa0436920:intron | 15.0% |
| !! | AAAATAACTTACAATGATTT+GGG | + | chr3_2:90809727-90809746 | None:intergenic | 15.0% |
| !!! | ACAACCAATATATAGATTTT+AGG | - | chr3_2:90804955-90804974 | Msa0436920:three_prime_UTR | 20.0% |
| !! | AGAACCTAAAATCTATATAT+TGG | + | chr3_2:90804962-90804981 | None:intergenic | 20.0% |
| !!! | TTCAATTGTGTAATTTGTAT+TGG | + | chr3_2:90806695-90806714 | None:intergenic | 20.0% |
| !! | CTAATATATTTGCATAGTTA+AGG | + | chr3_2:90806734-90806753 | None:intergenic | 20.0% |
| !!! | ATATTAGTCTAAGAAACATA+CGG | - | chr3_2:90806792-90806811 | Msa0436920:intron | 20.0% |
| !! | AGAAAATCATAAAAGGTTAA+GGG | + | chr3_2:90806962-90806981 | None:intergenic | 20.0% |
| !! | AAGAAAATCATAAAAGGTTA+AGG | + | chr3_2:90806963-90806982 | None:intergenic | 20.0% |
| !! | TTGTAAAAATAATAAAGGTC+TGG | - | chr3_2:90806982-90807001 | Msa0436920:CDS | 20.0% |
| !! | ATTAATTTAGGTATTTGCTT+AGG | - | chr3_2:90807906-90807925 | Msa0436920:intron | 20.0% |
| !!! | GAACTAATTACATTTTTCTA+CGG | - | chr3_2:90808235-90808254 | Msa0436920:intron | 20.0% |
| !! | TACTTCATTTATTATTTGTC+CGG | - | chr3_2:90808400-90808419 | Msa0436920:CDS | 20.0% |
| !! | CAAAATAACTTACAATGATT+TGG | + | chr3_2:90809728-90809747 | None:intergenic | 20.0% |
| !!! | CAAATCATTGTAAGTTATTT+TGG | - | chr3_2:90809726-90809745 | Msa0436920:intron | 20.0% |
| !!! | AAAATCTGGTTATACATTTT+GGG | + | chr3_2:90809796-90809815 | None:intergenic | 20.0% |
| !!! | TAAAATCTGGTTATACATTT+TGG | + | chr3_2:90809797-90809816 | None:intergenic | 20.0% |
| !! | AACCTTATTTGAACTACATT+TGG | - | chr3_2:90805221-90805240 | Msa0436920:CDS | 25.0% |
| !! | ACCTTATTTGAACTACATTT+GGG | - | chr3_2:90805222-90805241 | Msa0436920:CDS | 25.0% |
| ! | TATTTGACGAAAATCAGAAT+TGG | - | chr3_2:90805387-90805406 | Msa0436920:intron | 25.0% |
| ! | ATTTGACGAAAATCAGAATT+GGG | - | chr3_2:90805388-90805407 | Msa0436920:intron | 25.0% |
| !! | TAGGTTTTCAAACATGAATT+TGG | - | chr3_2:90805465-90805484 | Msa0436920:intron | 25.0% |
| ! | TTACTCTTTACAACTATAGA+AGG | - | chr3_2:90805490-90805509 | Msa0436920:intron | 25.0% |
| ! | TACTCTTTACAACTATAGAA+GGG | - | chr3_2:90805491-90805510 | Msa0436920:intron | 25.0% |
| ! | TAAAGATTAGCACAAAATTG+TGG | - | chr3_2:90805894-90805913 | Msa0436920:intron | 25.0% |
| ! | ATTGAAAAACAAAGAGTAGA+CGG | - | chr3_2:90806015-90806034 | Msa0436920:intron | 25.0% |
| !! | GCAATGTTACTTATTTATGA+GGG | + | chr3_2:90806243-90806262 | None:intergenic | 25.0% |
| !! | AGCAATGTTACTTATTTATG+AGG | + | chr3_2:90806244-90806263 | None:intergenic | 25.0% |
| ! | TAAATAAGTAACATTGCTCA+TGG | - | chr3_2:90806246-90806265 | Msa0436920:intron | 25.0% |
| !! | ATTTTATGTACCTGAATTTC+AGG | - | chr3_2:90806313-90806332 | Msa0436920:intron | 25.0% |
| ! | ACTAATATACGATTATGTGT+TGG | + | chr3_2:90806780-90806799 | None:intergenic | 25.0% |
| !! | TATTAGTCTAAGAAACATAC+GGG | - | chr3_2:90806793-90806812 | Msa0436920:intron | 25.0% |
| ! | GAAAATCATAAAAGGTTAAG+GGG | + | chr3_2:90806961-90806980 | None:intergenic | 25.0% |
| ! | AAACTTGATATAATTGCAGT+AGG | + | chr3_2:90807115-90807134 | None:intergenic | 25.0% |
| ! | AGTTTCTTCTCTAATAATAC+AGG | - | chr3_2:90807130-90807149 | Msa0436920:intron | 25.0% |
| ! | TATAACAGAAATAAGGAAGT+CGG | + | chr3_2:90807210-90807229 | None:intergenic | 25.0% |
| ! | TTTCAACATTCATATTTCCT+AGG | - | chr3_2:90807441-90807460 | Msa0436920:intron | 25.0% |
| ! | TTCAACATTCATATTTCCTA+GGG | - | chr3_2:90807442-90807461 | Msa0436920:intron | 25.0% |
| ! | TACAAATACCTAAATGAGAA+AGG | + | chr3_2:90807688-90807707 | None:intergenic | 25.0% |
| ! | AACTTCAATTATTCACTCTT+GGG | - | chr3_2:90807718-90807737 | Msa0436920:intron | 25.0% |
| ! | GTTTCTTGTATCATCTATAT+CGG | - | chr3_2:90807878-90807897 | Msa0436920:intron | 25.0% |
| !!! | ATATCGGTACTGATTAATTT+AGG | - | chr3_2:90807894-90807913 | Msa0436920:intron | 25.0% |
| !!! | TCTCACTTGGTTAAATTTTT+TGG | + | chr3_2:90808058-90808077 | None:intergenic | 25.0% |
| ! | TGATTGACAACAAAGAAATA+TGG | - | chr3_2:90808085-90808104 | Msa0436920:intron | 25.0% |
| ! | ATTCACTAGTAAATAAGGAT+TGG | + | chr3_2:90808211-90808230 | None:intergenic | 25.0% |
| ! | TGCAACTACTTTAATAGATA+AGG | - | chr3_2:90808436-90808455 | Msa0436920:intron | 25.0% |
| ! | GCAACTACTTTAATAGATAA+GGG | - | chr3_2:90808437-90808456 | Msa0436920:intron | 25.0% |
| ! | AAAAGGAATAGTATTTGGAA+CGG | - | chr3_2:90808559-90808578 | Msa0436920:intron | 25.0% |
| ! | TACAGTAAAAATAACAACCA+AGG | + | chr3_2:90808749-90808768 | None:intergenic | 25.0% |
| !!! | TTATTTTGAGTCAATCCATT+TGG | - | chr3_2:90809105-90809124 | Msa0436920:intron | 25.0% |
| !! | TTTTAGTATTAGTACTTGGA+TGG | - | chr3_2:90809227-90809246 | Msa0436920:intron | 25.0% |
| ! | ATAAATCTATTGCAGTTTCA+AGG | + | chr3_2:90809657-90809676 | None:intergenic | 25.0% |
| !! | AAATCTGGTTATACATTTTG+GGG | + | chr3_2:90809795-90809814 | None:intergenic | 25.0% |
| TGCGTATCACAAAAAGATAA+AGG | - | chr3_2:90804883-90804902 | Msa0436920:three_prime_UTR | 30.0% | |
| AATGATTACTGAAGAGTAGA+AGG | + | chr3_2:90804918-90804937 | None:intergenic | 30.0% | |
| CCTGAAATCTATTTACATGA+GGG | + | chr3_2:90805073-90805092 | None:intergenic | 30.0% | |
| ACCTGAAATCTATTTACATG+AGG | + | chr3_2:90805074-90805093 | None:intergenic | 30.0% | |
| GTAATGTTTGTATCTAGTTG+AGG | - | chr3_2:90805092-90805111 | Msa0436920:CDS | 30.0% | |
| AATATATCCACTATCAGTCA+AGG | + | chr3_2:90805173-90805192 | None:intergenic | 30.0% | |
| CAAATAAGGTTGAGCAAATT+CGG | + | chr3_2:90805212-90805231 | None:intergenic | 30.0% | |
| ACCCAAATGTAGTTCAAATA+AGG | + | chr3_2:90805226-90805245 | None:intergenic | 30.0% | |
| AACACAATGCAAATAGGAAT+GGG | + | chr3_2:90805251-90805270 | None:intergenic | 30.0% | |
| TAACACAATGCAAATAGGAA+TGG | + | chr3_2:90805252-90805271 | None:intergenic | 30.0% | |
| !!! | CATCTCTGTTTTTTACTTGA+TGG | + | chr3_2:90805542-90805561 | None:intergenic | 30.0% |
| AATTTGTAAATCACGAGTGT+AGG | - | chr3_2:90805704-90805723 | Msa0436920:CDS | 30.0% | |
| TAGGATGAAATTTCGTGATT+GGG | - | chr3_2:90805723-90805742 | Msa0436920:CDS | 30.0% | |
| GTGAAAAGGAACTAATGTAA+CGG | - | chr3_2:90805811-90805830 | Msa0436920:CDS | 30.0% | |
| ATTAGCACAAAATTGTGGAT+AGG | - | chr3_2:90805899-90805918 | Msa0436920:intron | 30.0% | |
| ! | ATAACATAGTTCCACTCTTT+TGG | + | chr3_2:90805997-90806016 | None:intergenic | 30.0% |
| TTGAAAAACAAAGAGTAGAC+GGG | - | chr3_2:90806016-90806035 | Msa0436920:intron | 30.0% | |
| ! | CTTGAGAAGAGTATATAAAG+AGG | + | chr3_2:90806127-90806146 | None:intergenic | 30.0% |
| ATCGTGTCTTTGTAAGTTAA+AGG | + | chr3_2:90806219-90806238 | None:intergenic | 30.0% | |
| TTGAATTCTGATTCACTGTA+AGG | + | chr3_2:90806428-90806447 | None:intergenic | 30.0% | |
| TTCTTACTTTCAACACTTCA+AGG | + | chr3_2:90806460-90806479 | None:intergenic | 30.0% | |
| AAGAATGTTGTATGTTCTTG+AGG | + | chr3_2:90806505-90806524 | None:intergenic | 30.0% | |
| TATATCTTCACAATAGCAAC+CGG | + | chr3_2:90806597-90806616 | None:intergenic | 30.0% | |
| CAGAGAGAATACACAAAAAT+AGG | - | chr3_2:90806918-90806937 | Msa0436920:CDS | 30.0% | |
| ! | ATCTTTTTCTTCTATGATCG+TGG | + | chr3_2:90807062-90807081 | None:intergenic | 30.0% |
| CGTCACATATAACAGAAATA+AGG | + | chr3_2:90807217-90807236 | None:intergenic | 30.0% | |
| TTTCTGTTATATGTGACGAA+TGG | - | chr3_2:90807219-90807238 | Msa0436920:intron | 30.0% | |
| !! | TGATTGTTTCTATGTTTGAG+AGG | - | chr3_2:90807286-90807305 | Msa0436920:intron | 30.0% |
| ! | AAATTTTGTAACTGCAGCAA+TGG | - | chr3_2:90807332-90807351 | Msa0436920:intron | 30.0% |
| AAAGAGAATTTATGAGGATG+TGG | + | chr3_2:90807401-90807420 | None:intergenic | 30.0% | |
| ! | CCTTCTAAAGAGAATTTATG+AGG | + | chr3_2:90807407-90807426 | None:intergenic | 30.0% |
| CCTCATAAATTCTCTTTAGA+AGG | - | chr3_2:90807404-90807423 | Msa0436920:intron | 30.0% | |
| GGAAATATGAATGTTGAAAC+AGG | + | chr3_2:90807440-90807459 | None:intergenic | 30.0% | |
| ATGACAATCTGCATTTGAAA+AGG | + | chr3_2:90807627-90807646 | None:intergenic | 30.0% | |
| CAAGAGTGAATAATTGAAGT+TGG | + | chr3_2:90807719-90807738 | None:intergenic | 30.0% | |
| CAACTTCAATTATTCACTCT+TGG | - | chr3_2:90807717-90807736 | Msa0436920:intron | 30.0% | |
| !!! | CACTTGGTTAAATTTTTTGG+TGG | + | chr3_2:90808055-90808074 | None:intergenic | 30.0% |
| CATTACAGAAACTTCAAAAC+AGG | + | chr3_2:90808132-90808151 | None:intergenic | 30.0% | |
| !!! | CTGTTTTGAAGTTTCTGTAA+TGG | - | chr3_2:90808130-90808149 | Msa0436920:intron | 30.0% |
| ! | GGCTTTTGTCATAAGATTAA+AGG | - | chr3_2:90808151-90808170 | Msa0436920:intron | 30.0% |
| CCTGTATTCACTAGTAAATA+AGG | + | chr3_2:90808216-90808235 | None:intergenic | 30.0% | |
| ! | CCTTATTTACTAGTGAATAC+AGG | - | chr3_2:90808213-90808232 | Msa0436920:intron | 30.0% |
| GACACATAATATGAGACAAA+AGG | - | chr3_2:90808542-90808561 | Msa0436920:intron | 30.0% | |
| GAGACAAAAGGAATAGTATT+TGG | - | chr3_2:90808554-90808573 | Msa0436920:intron | 30.0% | |
| !! | GTGTTATTTGTAACTTCTCT+TGG | - | chr3_2:90808802-90808821 | Msa0436920:intron | 30.0% |
| AGATTGCTTGAAAGTAAAGA+TGG | + | chr3_2:90808957-90808976 | None:intergenic | 30.0% | |
| ATATAACCATAACCGATTGA+GGG | + | chr3_2:90809192-90809211 | None:intergenic | 30.0% | |
| ! | TTGATGATACACATTCAACA+TGG | - | chr3_2:90809419-90809438 | Msa0436920:intron | 30.0% |
| GATTTAGGAGGATTAAGAAA+GGG | + | chr3_2:90809475-90809494 | None:intergenic | 30.0% | |
| TGATTTAGGAGGATTAAGAA+AGG | + | chr3_2:90809476-90809495 | None:intergenic | 30.0% | |
| CTCCTAAATCAAATGACTAT+GGG | - | chr3_2:90809485-90809504 | Msa0436920:intron | 30.0% | |
| TATGGGAGAATGAAAACAAA+AGG | - | chr3_2:90809502-90809521 | Msa0436920:intron | 30.0% | |
| GAGAATGAAAACAAAAGGTT+TGG | - | chr3_2:90809507-90809526 | Msa0436920:intron | 30.0% | |
| ! | AAAACAAAAGGTTTGGTTGA+TGG | - | chr3_2:90809514-90809533 | Msa0436920:intron | 30.0% |
| ATTCTAATAGAGGAATCTTC+AGG | + | chr3_2:90809700-90809719 | None:intergenic | 30.0% | |
| !! | TTTGGGAAGTATTCTAATAG+AGG | + | chr3_2:90809710-90809729 | None:intergenic | 30.0% |
| !!! | CATTGTAAGTTATTTTGGCT+TGG | - | chr3_2:90809731-90809750 | Msa0436920:intron | 30.0% |
| ! | AATCTGGTTATACATTTTGG+GGG | + | chr3_2:90809794-90809813 | None:intergenic | 30.0% |
| ! | CCAGTTACTAATCTAAAATC+TGG | + | chr3_2:90809810-90809829 | None:intergenic | 30.0% |
| ! | CCAGATTTTAGATTAGTAAC+TGG | - | chr3_2:90809807-90809826 | Msa0436920:intron | 30.0% |
| GGCTAGTATACAAAAAGAAT+GGG | + | chr3_2:90809856-90809875 | None:intergenic | 30.0% | |
| AGGCTAGTATACAAAAAGAA+TGG | + | chr3_2:90809857-90809876 | None:intergenic | 30.0% | |
| AAACTTACTTGATAGAGGAA+GGG | + | chr3_2:90809901-90809920 | None:intergenic | 30.0% | |
| TTCCTCTATCAAGTAAGTTT+CGG | - | chr3_2:90809901-90809920 | Msa0436920:CDS | 30.0% | |
| TCGGAACAAATGTAAATATG+AGG | - | chr3_2:90809920-90809939 | Msa0436920:CDS | 30.0% | |
| AAATATGAGGCAATCTCATA+AGG | - | chr3_2:90809933-90809952 | Msa0436920:CDS | 30.0% | |
| AAGAAGCTAGCATCAAGAAA+AGG | + | chr3_2:90804985-90805004 | None:intergenic | 35.0% | |
| ! | TGATGTTTTCCATGTATCAC+AGG | - | chr3_2:90805004-90805023 | Msa0436920:exon | 35.0% |
| ! | TCTTTTCTGTCTTCTGATGT+TGG | - | chr3_2:90805041-90805060 | Msa0436920:CDS | 35.0% |
| CCCTCATGTAAATAGATTTC+AGG | - | chr3_2:90805070-90805089 | Msa0436920:CDS | 35.0% | |
| ! | AGGAATGTAACATTCTAGAG+AGG | + | chr3_2:90805153-90805172 | None:intergenic | 35.0% |
| TTACATTCCTTGACTGATAG+TGG | - | chr3_2:90805163-90805182 | Msa0436920:CDS | 35.0% | |
| TCCTATTTGCATTGTGTTAC+TGG | - | chr3_2:90805253-90805272 | Msa0436920:CDS | 35.0% | |
| ACCAGTAACACAATGCAAAT+AGG | + | chr3_2:90805257-90805276 | None:intergenic | 35.0% | |
| TCTAGATCACTATGCTAGAA+TGG | - | chr3_2:90805276-90805295 | Msa0436920:CDS | 35.0% | |
| CTAGATCACTATGCTAGAAT+GGG | - | chr3_2:90805277-90805296 | Msa0436920:CDS | 35.0% | |
| TGTGTTGAAAATCCTAGACA+GGG | + | chr3_2:90805328-90805347 | None:intergenic | 35.0% | |
| TTGTGTTGAAAATCCTAGAC+AGG | + | chr3_2:90805329-90805348 | None:intergenic | 35.0% | |
| ACGAAAATCAGAATTGGGAA+TGG | - | chr3_2:90805393-90805412 | Msa0436920:intron | 35.0% | |
| TAGCTAATAGCCAAATGCAA+CGG | - | chr3_2:90805593-90805612 | Msa0436920:intron | 35.0% | |
| ! | TATGCCACTGTATCATGTTT+TGG | + | chr3_2:90805637-90805656 | None:intergenic | 35.0% |
| GTAGGATGAAATTTCGTGAT+TGG | - | chr3_2:90805722-90805741 | Msa0436920:CDS | 35.0% | |
| AGGATGAAATTTCGTGATTG+GGG | - | chr3_2:90805724-90805743 | Msa0436920:CDS | 35.0% | |
| ! | GGTCTTGATAGTATCTGTTT+GGG | - | chr3_2:90805758-90805777 | Msa0436920:CDS | 35.0% |
| GAGGATGCAAATTTGTGAAA+AGG | - | chr3_2:90805797-90805816 | Msa0436920:CDS | 35.0% | |
| GATAGAAAGAACCAAAAGAG+TGG | - | chr3_2:90805983-90806002 | Msa0436920:intron | 35.0% | |
| TGAAAAACAAAGAGTAGACG+GGG | - | chr3_2:90806017-90806036 | Msa0436920:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr3_2:90806080-90806099 | Msa0436920:intron | 35.0% | |
| !! | CATTAAAAGCCGGTTTTGTA+AGG | + | chr3_2:90806092-90806111 | None:intergenic | 35.0% |
| ! | GAGAAGAGTATATAAAGAGG+AGG | + | chr3_2:90806124-90806143 | None:intergenic | 35.0% |
| AGAGATCCATACTATAGTGA+GGG | + | chr3_2:90806196-90806215 | None:intergenic | 35.0% | |
| ! | ATTTCAGGTCATTGATGCAT+TGG | - | chr3_2:90806328-90806347 | Msa0436920:intron | 35.0% |
| ATATACTTGAGCGGCAAAAA+AGG | + | chr3_2:90806358-90806377 | None:intergenic | 35.0% | |
| GTAGCTTAACGTAATATTGC+CGG | - | chr3_2:90806575-90806594 | Msa0436920:intron | 35.0% | |
| GGAAGTCACTCAAATTGTAA+TGG | + | chr3_2:90806835-90806854 | None:intergenic | 35.0% | |
| TGATATAATTGCAGTAGGAG+AGG | + | chr3_2:90807110-90807129 | None:intergenic | 35.0% | |
| ACATTCATATTTCCTAGGGT+TGG | - | chr3_2:90807446-90807465 | Msa0436920:intron | 35.0% | |
| CTCTTCATACTCCATAACAA+CGG | + | chr3_2:90807475-90807494 | None:intergenic | 35.0% | |
| ATGGAGTATGAAGAGTAAGT+AGG | - | chr3_2:90807480-90807499 | Msa0436920:intron | 35.0% | |
| TTGAAAAGGAATGTGTGCTA+GGG | + | chr3_2:90807613-90807632 | None:intergenic | 35.0% | |
| TTTGAAAAGGAATGTGTGCT+AGG | + | chr3_2:90807614-90807633 | None:intergenic | 35.0% | |
| TTAGGTATTTGCTTAGGTGT+AGG | - | chr3_2:90807912-90807931 | Msa0436920:intron | 35.0% | |
| TTAGGTGTAGGACATATAGA+AGG | - | chr3_2:90807924-90807943 | Msa0436920:intron | 35.0% | |
| TAGGTGTAGGACATATAGAA+GGG | - | chr3_2:90807925-90807944 | Msa0436920:intron | 35.0% | |
| TAGGACATATAGAAGGGTAA+AGG | - | chr3_2:90807931-90807950 | Msa0436920:intron | 35.0% | |
| AGGACATATAGAAGGGTAAA+GGG | - | chr3_2:90807932-90807951 | Msa0436920:intron | 35.0% | |
| ! | CAATCATTAGTTCTCTCACT+TGG | + | chr3_2:90808071-90808090 | None:intergenic | 35.0% |
| ATGCTACATTAGCAAAGCTT+GGG | - | chr3_2:90808185-90808204 | Msa0436920:intron | 35.0% | |
| ! | ATTTGGAACGGTGATTCTTA+AGG | - | chr3_2:90808571-90808590 | Msa0436920:intron | 35.0% |
| TTAAGGCCAAGATGTCAAAA+GGG | - | chr3_2:90808588-90808607 | Msa0436920:intron | 35.0% | |
| ! | AAAGAGTGAATTGCTCCTTT+TGG | - | chr3_2:90808646-90808665 | Msa0436920:intron | 35.0% |
| !!! | TTGCTCCTTTTGGAATTTGA+AGG | - | chr3_2:90808656-90808675 | Msa0436920:intron | 35.0% |
| TGCTTCCTTCAAATTCCAAA+AGG | + | chr3_2:90808664-90808683 | None:intergenic | 35.0% | |
| ! | AGCATATAACTTTTCTCCAC+TGG | + | chr3_2:90808828-90808847 | None:intergenic | 35.0% |
| TACTTTCAAGCAATCTCTTC+AGG | - | chr3_2:90808961-90808980 | Msa0436920:intron | 35.0% | |
| ATGATTGTCCACTAACCAAA+TGG | + | chr3_2:90809123-90809142 | None:intergenic | 35.0% | |
| ! | ATTTGGTTAGTGGACAATCA+TGG | - | chr3_2:90809122-90809141 | Msa0436920:intron | 35.0% |
| CATATAACCATAACCGATTG+AGG | + | chr3_2:90809193-90809212 | None:intergenic | 35.0% | |
| GAATGTGTATCATCAATCCT+GGG | + | chr3_2:90809415-90809434 | None:intergenic | 35.0% | |
| TGAATGTGTATCATCAATCC+TGG | + | chr3_2:90809416-90809435 | None:intergenic | 35.0% | |
| ATTCAACATGGTTACACTTG+CGG | - | chr3_2:90809431-90809450 | Msa0436920:intron | 35.0% | |
| AGGATTAAGAAAGGGTAAAG+AGG | + | chr3_2:90809467-90809486 | None:intergenic | 35.0% | |
| ! | CCATAGTCATTTGATTTAGG+AGG | + | chr3_2:90809487-90809506 | None:intergenic | 35.0% |
| CCTCCTAAATCAAATGACTA+TGG | - | chr3_2:90809484-90809503 | Msa0436920:intron | 35.0% | |
| ! | CTCCCATAGTCATTTGATTT+AGG | + | chr3_2:90809490-90809509 | None:intergenic | 35.0% |
| ! | GGTTAATTTTCTAAGTGACG+AGG | - | chr3_2:90809603-90809622 | Msa0436920:intron | 35.0% |
| TCATAGAAGACTCAAACCTT+TGG | - | chr3_2:90809627-90809646 | Msa0436920:intron | 35.0% | |
| !!! | ATTTTGGCTTGGTTAGTAAC+TGG | - | chr3_2:90809742-90809761 | Msa0436920:intron | 35.0% |
| TGAAGTTACAGATCAAGGAA+AGG | + | chr3_2:90809877-90809896 | None:intergenic | 35.0% | |
| AACTTACTTGATAGAGGAAG+GGG | + | chr3_2:90809900-90809919 | None:intergenic | 35.0% | |
| GAAACTTACTTGATAGAGGA+AGG | + | chr3_2:90809902-90809921 | None:intergenic | 35.0% | |
| TTCCGAAACTTACTTGATAG+AGG | + | chr3_2:90809906-90809925 | None:intergenic | 35.0% | |
| !! | AGCTTTAGTTGGTGAGAGTT+CGG | - | chr3_2:90804796-90804815 | Msa0436920:three_prime_UTR | 40.0% |
| TCCCAAAAGTAGCTTGACAA+GGG | - | chr3_2:90804838-90804857 | Msa0436920:three_prime_UTR | 40.0% | |
| !!! | TCCCTTGTCAAGCTACTTTT+GGG | + | chr3_2:90804842-90804861 | None:intergenic | 40.0% |
| !! | ATCCCTTGTCAAGCTACTTT+TGG | + | chr3_2:90804843-90804862 | None:intergenic | 40.0% |
| AAAAGTAGCTTGACAAGGGA+TGG | - | chr3_2:90804842-90804861 | Msa0436920:three_prime_UTR | 40.0% | |
| CATACTGATCCTGTGATACA+TGG | + | chr3_2:90805016-90805035 | None:intergenic | 40.0% | |
| CATGTATCACAGGATCAGTA+TGG | - | chr3_2:90805014-90805033 | Msa0436920:exon | 40.0% | |
| ! | ATCAGAATTGGGAATGGACT+TGG | - | chr3_2:90805399-90805418 | Msa0436920:intron | 40.0% |
| !!! | ACTGTATCATGTTTTGGAGG+TGG | + | chr3_2:90805631-90805650 | None:intergenic | 40.0% |
| ACCTCCAAAACATGATACAG+TGG | - | chr3_2:90805630-90805649 | Msa0436920:intron | 40.0% | |
| ! | GGGTCTTGATAGTATCTGTT+TGG | - | chr3_2:90805757-90805776 | Msa0436920:CDS | 40.0% |
| ! | ATAGTATCTGTTTGGGACCT+GGG | - | chr3_2:90805765-90805784 | Msa0436920:CDS | 40.0% |
| ! | AGGAACTAATGTAACGGAAC+TGG | - | chr3_2:90805817-90805836 | Msa0436920:CDS | 40.0% |
| ! | GGAACTAATGTAACGGAACT+GGG | - | chr3_2:90805818-90805837 | Msa0436920:CDS | 40.0% |
| GATATGTGAGCGTGAAATAG+AGG | - | chr3_2:90805867-90805886 | Msa0436920:intron | 40.0% | |
| ! | TGTTTTGCACTATACCAGCA+TGG | + | chr3_2:90805925-90805944 | None:intergenic | 40.0% |
| GTGCAAAACACTAATGTGCT+AGG | - | chr3_2:90805935-90805954 | Msa0436920:intron | 40.0% | |
| TAGGAGCTCAGAGAAAACAA+TGG | - | chr3_2:90805954-90805973 | Msa0436920:intron | 40.0% | |
| GGGGAATACAATTTACTCCA+GGG | - | chr3_2:90806036-90806055 | Msa0436920:intron | 40.0% | |
| GGGAATACAATTTACTCCAG+GGG | - | chr3_2:90806037-90806056 | Msa0436920:intron | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr3_2:90806082-90806101 | None:intergenic | 40.0% |
| !! | CAAAACCGGCTTTTAATGAG+AGG | - | chr3_2:90806094-90806113 | Msa0436920:intron | 40.0% |
| GCAATCCTCTCATTAAAAGC+CGG | + | chr3_2:90806102-90806121 | None:intergenic | 40.0% | |
| ! | AGAGTCTTATCTATCCGATG+TGG | - | chr3_2:90806145-90806164 | Msa0436920:intron | 40.0% |
| ! | GAGTCTTATCTATCCGATGT+GGG | - | chr3_2:90806146-90806165 | Msa0436920:intron | 40.0% |
| AGATCCATACTATAGTGAGG+GGG | + | chr3_2:90806194-90806213 | None:intergenic | 40.0% | |
| GAGATCCATACTATAGTGAG+GGG | + | chr3_2:90806195-90806214 | None:intergenic | 40.0% | |
| GAGAGATCCATACTATAGTG+AGG | + | chr3_2:90806197-90806216 | None:intergenic | 40.0% | |
| GCATCAATGACCTGAAATTC+AGG | + | chr3_2:90806326-90806345 | None:intergenic | 40.0% | |
| TATATCTGCGGAGACACTAT+GGG | - | chr3_2:90806373-90806392 | Msa0436920:intron | 40.0% | |
| TATGATCGTGGTTGCAAATG+AGG | + | chr3_2:90807050-90807069 | None:intergenic | 40.0% | |
| GATCTTGTAGAGGAGGTTAA+AGG | - | chr3_2:90807176-90807195 | Msa0436920:CDS | 40.0% | |
| ! | GAATGGAGAAAGTGCAAAAG+AGG | - | chr3_2:90807236-90807255 | Msa0436920:intron | 40.0% |
| CCTACAGATAACACTTCAGA+GGG | - | chr3_2:90807527-90807546 | Msa0436920:CDS | 40.0% | |
| AGAGGGATCATCATTTGATG+CGG | - | chr3_2:90807544-90807563 | Msa0436920:CDS | 40.0% | |
| TGAAAAGGAATGTGTGCTAG+GGG | + | chr3_2:90807612-90807631 | None:intergenic | 40.0% | |
| CTCTGCTTCCTTTCTCATTT+AGG | - | chr3_2:90807677-90807696 | Msa0436920:intron | 40.0% | |
| TACATCAATCCCAGAAGTCT+GGG | + | chr3_2:90807805-90807824 | None:intergenic | 40.0% | |
| ATACATCAATCCCAGAAGTC+TGG | + | chr3_2:90807806-90807825 | None:intergenic | 40.0% | |
| !! | ACTTCTGGGATTGATGTATC+CGG | - | chr3_2:90807807-90807826 | Msa0436920:intron | 40.0% |
| TCAGTTCAGACAACTAACCA+AGG | + | chr3_2:90807857-90807876 | None:intergenic | 40.0% | |
| GGACATATAGAAGGGTAAAG+GGG | - | chr3_2:90807933-90807952 | Msa0436920:intron | 40.0% | |
| GACATATAGAAGGGTAAAGG+GGG | - | chr3_2:90807934-90807953 | Msa0436920:intron | 40.0% | |
| ACATATAGAAGGGTAAAGGG+GGG | - | chr3_2:90807935-90807954 | Msa0436920:intron | 40.0% | |
| GTGTGGTGCAATGAAATAGA+AGG | - | chr3_2:90808000-90808019 | Msa0436920:intron | 40.0% | |
| CATGCTACATTAGCAAAGCT+TGG | - | chr3_2:90808184-90808203 | Msa0436920:intron | 40.0% | |
| GTTGCAATGCAAGTATATGC+CGG | + | chr3_2:90808422-90808441 | None:intergenic | 40.0% | |
| CTTAAGGCCAAGATGTCAAA+AGG | - | chr3_2:90808587-90808606 | Msa0436920:intron | 40.0% | |
| ! | ACGTAACCCTTTTGACATCT+TGG | + | chr3_2:90808597-90808616 | None:intergenic | 40.0% |
| CTCTTGAAAGCAACTCTACA+AGG | + | chr3_2:90808922-90808941 | None:intergenic | 40.0% | |
| ! | TGTAGAGTTGCTTTCAAGAG+TGG | - | chr3_2:90808922-90808941 | Msa0436920:intron | 40.0% |
| GCAATCTCTTCAGGAATATC+TGG | - | chr3_2:90808970-90808989 | Msa0436920:intron | 40.0% | |
| AGAAGTCCCATGGAATTGTT+CGG | - | chr3_2:90809025-90809044 | Msa0436920:intron | 40.0% | |
| GAGTCAATCCATTTGGTTAG+TGG | - | chr3_2:90809112-90809131 | Msa0436920:intron | 40.0% | |
| TTCAAAAATGGCCTCAGCTT+AGG | - | chr3_2:90809157-90809176 | Msa0436920:intron | 40.0% | |
| AGGAATAAACAGCCCTCAAT+CGG | - | chr3_2:90809177-90809196 | Msa0436920:intron | 40.0% | |
| !! | AAGGTTTGGTTGATGGAAGA+TGG | - | chr3_2:90809521-90809540 | Msa0436920:intron | 40.0% |
| AAGATGGACATTGGCATTCA+GGG | - | chr3_2:90809537-90809556 | Msa0436920:intron | 40.0% | |
| !! | ATTTTGGGGGCATATACAGA+GGG | + | chr3_2:90809781-90809800 | None:intergenic | 40.0% |
| !! | GCTTTAGTTGGTGAGAGTTC+GGG | - | chr3_2:90804797-90804816 | Msa0436920:three_prime_UTR | 45.0% |
| CTCCCAAAAGTAGCTTGACA+AGG | - | chr3_2:90804837-90804856 | Msa0436920:three_prime_UTR | 45.0% | |
| !! | GCCACTGTATCATGTTTTGG+AGG | + | chr3_2:90805634-90805653 | None:intergenic | 45.0% |
| CTGACACTACTGCAAGCATA+GGG | - | chr3_2:90805670-90805689 | Msa0436920:intron | 45.0% | |
| ! | GATAGTATCTGTTTGGGACC+TGG | - | chr3_2:90805764-90805783 | Msa0436920:CDS | 45.0% |
| AAATTGTGGATAGGCCATGC+TGG | - | chr3_2:90805908-90805927 | Msa0436920:intron | 45.0% | |
| CGGGGAATACAATTTACTCC+AGG | - | chr3_2:90806035-90806054 | Msa0436920:intron | 45.0% | |
| !! | AGGGGCACCTGTTGAAATTT+GGG | - | chr3_2:90806055-90806074 | Msa0436920:intron | 45.0% |
| GTTAGGCCCCAAATTTCAAC+AGG | + | chr3_2:90806065-90806084 | None:intergenic | 45.0% | |
| TATCTATCCGATGTGGGACT+TGG | - | chr3_2:90806152-90806171 | Msa0436920:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | - | chr3_2:90806153-90806172 | Msa0436920:intron | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | + | chr3_2:90806162-90806181 | None:intergenic | 45.0% | |
| !! | TATAGTGAGGGGGTGCTATT+GGG | + | chr3_2:90806184-90806203 | None:intergenic | 45.0% |
| TTGCCGCTCAAGTATATCTG+CGG | - | chr3_2:90806361-90806380 | Msa0436920:intron | 45.0% | |
| TCTCCGCAGATATACTTGAG+CGG | + | chr3_2:90806367-90806386 | None:intergenic | 45.0% | |
| GTATATCTGCGGAGACACTA+TGG | - | chr3_2:90806372-90806391 | Msa0436920:intron | 45.0% | |
| AATCGCTCAGCTTCGTCAAA+TGG | + | chr3_2:90806660-90806679 | None:intergenic | 45.0% | |
| TGGTTGCAAATGAGGCAAAG+AGG | + | chr3_2:90807042-90807061 | None:intergenic | 45.0% | |
| GCAGTAGGAGAGGCAAAATA+AGG | + | chr3_2:90807100-90807119 | None:intergenic | 45.0% | |
| CTGTGCTTCTGATCTTGTAG+AGG | - | chr3_2:90807166-90807185 | Msa0436920:intron | 45.0% | |
| TGCTTCTGATCTTGTAGAGG+AGG | - | chr3_2:90807169-90807188 | Msa0436920:CDS | 45.0% | |
| !! | TAGAGGAGGTTAAAGGCATC+TGG | - | chr3_2:90807183-90807202 | Msa0436920:CDS | 45.0% |
| GCCTACAGATAACACTTCAG+AGG | - | chr3_2:90807526-90807545 | Msa0436920:CDS | 45.0% | |
| !! | CCCTCTGAAGTGTTATCTGT+AGG | + | chr3_2:90807530-90807549 | None:intergenic | 45.0% |
| GAGGGATCATCATTTGATGC+GGG | - | chr3_2:90807545-90807564 | Msa0436920:CDS | 45.0% | |
| AAGAATGCAGGAACTGGTGA+AGG | - | chr3_2:90807571-90807590 | Msa0436920:CDS | 45.0% | |
| TTCGTGTGTGATTGTGTGTG+TGG | - | chr3_2:90807983-90808002 | Msa0436920:intron | 45.0% | |
| CAAATGAGACACACGTGAGA+CGG | + | chr3_2:90808295-90808314 | None:intergenic | 45.0% | |
| !!! | CTCTTTTGTTGCTTGCTGTC+AGG | + | chr3_2:90808632-90808651 | None:intergenic | 45.0% |
| TTGTAACTTCTCTTGGCCAG+TGG | - | chr3_2:90808809-90808828 | Msa0436920:intron | 45.0% | |
| TCTCTTCAGGAATATCTGGC+TGG | - | chr3_2:90808974-90808993 | Msa0436920:intron | 45.0% | |
| ATTCCATGGGACTTCTGTGA+TGG | + | chr3_2:90809021-90809040 | None:intergenic | 45.0% | |
| GAAGTCCCATGGAATTGTTC+GGG | - | chr3_2:90809026-90809045 | Msa0436920:intron | 45.0% | |
| AACGACCCGAACAATTCCAT+GGG | + | chr3_2:90809034-90809053 | None:intergenic | 45.0% | |
| CATACATTGCATCCAGCCAA+AGG | + | chr3_2:90809060-90809079 | None:intergenic | 45.0% | |
| GGCTGTTTATTCCTAAGCTG+AGG | + | chr3_2:90809171-90809190 | None:intergenic | 45.0% | |
| AAACAGCCCTCAATCGGTTA+TGG | - | chr3_2:90809183-90809202 | Msa0436920:intron | 45.0% | |
| GAAAGGGTAAAGAGGATGAC+CGG | + | chr3_2:90809459-90809478 | None:intergenic | 45.0% | |
| !! | GGTTGATGGAAGATGGACAT+TGG | - | chr3_2:90809528-90809547 | Msa0436920:intron | 45.0% |
| GAAGATGGACATTGGCATTC+AGG | - | chr3_2:90809536-90809555 | Msa0436920:intron | 45.0% | |
| TGAGTCTTGCAACTCAGCTT+TGG | - | chr3_2:90809564-90809583 | Msa0436920:intron | 45.0% | |
| GCAGTTTCAAGGTTGACCAA+AGG | + | chr3_2:90809646-90809665 | None:intergenic | 45.0% | |
| !! | TTTTGGGGGCATATACAGAG+GGG | + | chr3_2:90809780-90809799 | None:intergenic | 45.0% |
| !! | CATTTTGGGGGCATATACAG+AGG | + | chr3_2:90809782-90809801 | None:intergenic | 45.0% |
| AGGGGTGAAGTTACAGATCA+AGG | + | chr3_2:90809882-90809901 | None:intergenic | 45.0% | |
| GGACTTGGAAGATGCAGACT+TGG | - | chr3_2:90805414-90805433 | Msa0436920:intron | 50.0% | |
| GCTTCTGCTTCCGTTGCATT+TGG | + | chr3_2:90805606-90805625 | None:intergenic | 50.0% | |
| GCTGACACTACTGCAAGCAT+AGG | - | chr3_2:90805669-90805688 | Msa0436920:intron | 50.0% | |
| GTGATTGGGGTGATGCTTCA+GGG | - | chr3_2:90805737-90805756 | Msa0436920:CDS | 50.0% | |
| CAAATTTCAACAGGTGCCCC+TGG | + | chr3_2:90806056-90806075 | None:intergenic | 50.0% | |
| !! | CAGGGGCACCTGTTGAAATT+TGG | - | chr3_2:90806054-90806073 | Msa0436920:intron | 50.0% |
| ! | GGGGCACCTGTTGAAATTTG+GGG | - | chr3_2:90806056-90806075 | Msa0436920:intron | 50.0% |
| !! | CTATAGTGAGGGGGTGCTAT+TGG | + | chr3_2:90806185-90806204 | None:intergenic | 50.0% |
| AGCACCCCCTCACTATAGTA+TGG | - | chr3_2:90806187-90806206 | Msa0436920:intron | 50.0% | |
| ! | AGCACGCAGCTTGGTTCTTT+CGG | + | chr3_2:90807372-90807391 | None:intergenic | 50.0% |
| ! | TGGCAAAAAAGCACGCAGCT+TGG | + | chr3_2:90807381-90807400 | None:intergenic | 50.0% |
| TAACAACGGCAACCAACCCT+AGG | + | chr3_2:90807461-90807480 | None:intergenic | 50.0% | |
| !! | AGGGTTGGTTGCCGTTGTTA+TGG | - | chr3_2:90807461-90807480 | Msa0436920:intron | 50.0% |
| TGATGCGGGAGAAAGAATGC+AGG | - | chr3_2:90807559-90807578 | Msa0436920:CDS | 50.0% | |
| GGGAGAAAGAATGCAGGAAC+TGG | - | chr3_2:90807565-90807584 | Msa0436920:CDS | 50.0% | |
| AGATCACCAGGAGGGTCAAT+TGG | + | chr3_2:90807765-90807784 | None:intergenic | 50.0% | |
| CAATTTGCGGGAAGATCACC+AGG | + | chr3_2:90807777-90807796 | None:intergenic | 50.0% | |
| GATTGATGTATCCGGCCCAA+AGG | - | chr3_2:90807815-90807834 | Msa0436920:intron | 50.0% | |
| AGATTTCAGTGCCCGCCTTT+GGG | + | chr3_2:90807833-90807852 | None:intergenic | 50.0% | |
| TATAGAAGGGTAAAGGGGGG+AGG | - | chr3_2:90807938-90807957 | Msa0436920:intron | 50.0% | |
| ATAGAAGGGTAAAGGGGGGA+GGG | - | chr3_2:90807939-90807958 | Msa0436920:intron | 50.0% | |
| CAACGACCCGAACAATTCCA+TGG | + | chr3_2:90809035-90809054 | None:intergenic | 50.0% | |
| CTTTCCTCGTTGTTTAGCCC+AGG | - | chr3_2:90809395-90809414 | Msa0436920:intron | 50.0% | |
| CAATCCTGGGCTAAACAACG+AGG | + | chr3_2:90809402-90809421 | None:intergenic | 50.0% | |
| CATGGTTACACTTGCGGATC+CGG | - | chr3_2:90809437-90809456 | Msa0436920:intron | 50.0% | |
| ! | TTGCAACTCAGCTTTGGCGA+TGG | - | chr3_2:90809570-90809589 | Msa0436920:intron | 50.0% |
| TTTGGCGATGGTTGTCGAAG+AGG | - | chr3_2:90809582-90809601 | Msa0436920:intron | 50.0% | |
| TGGTGAGAGTTCGGGTGAAG+AGG | - | chr3_2:90804805-90804824 | Msa0436920:three_prime_UTR | 55.0% | |
| ACTTGCAGTTCTGCTCGCTC+TGG | - | chr3_2:90805441-90805460 | Msa0436920:intron | 55.0% | |
| CAGTTCTGCTCGCTCTGGTT+AGG | - | chr3_2:90805446-90805465 | Msa0436920:intron | 55.0% | |
| CGTGATTGGGGTGATGCTTC+AGG | - | chr3_2:90805736-90805755 | Msa0436920:CDS | 55.0% | |
| ! | GTATCTGTTTGGGACCTGGG+TGG | - | chr3_2:90805768-90805787 | Msa0436920:CDS | 55.0% |
| TCTGCGGAGACACTATGGGA+CGG | - | chr3_2:90806377-90806396 | Msa0436920:intron | 55.0% | |
| AGACACTATGGGACGGTGGT+TGG | - | chr3_2:90806384-90806403 | Msa0436920:intron | 55.0% | |
| ! | ACGCAGCTTGGTTCTTTCGG+AGG | + | chr3_2:90807369-90807388 | None:intergenic | 55.0% |
| GGGTCAATTGGAGGTTGCTC+AGG | + | chr3_2:90807753-90807772 | None:intergenic | 55.0% | |
| CAACCTCCAATTGACCCTCC+TGG | - | chr3_2:90807756-90807775 | Msa0436920:intron | 55.0% | |
| TCACCAGGAGGGTCAATTGG+AGG | + | chr3_2:90807762-90807781 | None:intergenic | 55.0% | |
| TTGCGGGAAGATCACCAGGA+GGG | + | chr3_2:90807773-90807792 | None:intergenic | 55.0% | |
| TTTGCGGGAAGATCACCAGG+AGG | + | chr3_2:90807774-90807793 | None:intergenic | 55.0% | |
| AGTCTGGGCACGGCAATTTG+CGG | + | chr3_2:90807790-90807809 | None:intergenic | 55.0% | |
| AATTGCCGTGCCCAGACTTC+TGG | - | chr3_2:90807792-90807811 | Msa0436920:intron | 55.0% | |
| ATTGCCGTGCCCAGACTTCT+GGG | - | chr3_2:90807793-90807812 | Msa0436920:intron | 55.0% | |
| CAATCCCAGAAGTCTGGGCA+CGG | + | chr3_2:90807800-90807819 | None:intergenic | 55.0% | |
| TGATGTATCCGGCCCAAAGG+CGG | - | chr3_2:90807818-90807837 | Msa0436920:intron | 55.0% | |
| CAGATTTCAGTGCCCGCCTT+TGG | + | chr3_2:90807834-90807853 | None:intergenic | 55.0% | |
| TGAGACACACGTGAGACGGA+TGG | + | chr3_2:90808291-90808310 | None:intergenic | 55.0% | |
| CAGCCATCACAGAAGTCCCA+TGG | - | chr3_2:90809015-90809034 | Msa0436920:intron | 55.0% | |
| TGTTCGGGTCGTTGCACCTT+TGG | - | chr3_2:90809041-90809060 | Msa0436920:intron | 55.0% | |
| AGCTTGACAAGGGATGGCGC+TGG | - | chr3_2:90804848-90804867 | Msa0436920:three_prime_UTR | 60.0% | |
| CTAGACAGGGCATGTGCTGC+AGG | + | chr3_2:90805315-90805334 | None:intergenic | 60.0% | |
| CTGCAGCACATGCCCTGTCT+AGG | - | chr3_2:90805313-90805332 | Msa0436920:CDS | 60.0% | |
| GCATCCTCTGTCTTCCACCC+AGG | + | chr3_2:90805785-90805804 | None:intergenic | 60.0% | |
| GTCTGGGCACGGCAATTTGC+GGG | + | chr3_2:90807789-90807808 | None:intergenic | 60.0% | |
| GATGTATCCGGCCCAAAGGC+GGG | - | chr3_2:90807819-90807838 | Msa0436920:intron | 60.0% | |
| !! | GCGGGCACTGAAATCTGCCT+TGG | - | chr3_2:90807837-90807856 | Msa0436920:intron | 60.0% |
| ! | TGGGGGCATATACAGAGGGG+TGG | + | chr3_2:90809777-90809796 | None:intergenic | 60.0% |
| GGGACCTGGGTGGAAGACAG+AGG | - | chr3_2:90805778-90805797 | Msa0436920:CDS | 65.0% | |
| GCGGAGACACTATGGGACGG+TGG | - | chr3_2:90806380-90806399 | Msa0436920:intron | 65.0% | |
| TTCAGTGCCCGCCTTTGGGC+CGG | + | chr3_2:90807829-90807848 | None:intergenic | 65.0% | |
| CGGGTCGTTGCACCTTTGGC+TGG | - | chr3_2:90809045-90809064 | Msa0436920:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 90804794 | 90809966 | 90804794 | ID=Msa0436920;Name=Msa0436920 |
| chr3_2 | mRNA | 90804794 | 90809966 | 90804794 | ID=Msa0436920-mRNA-1;Parent=Msa0436920;Name=Msa0436920-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.71|0.75|1|1|1|8|228|377 |
| chr3_2 | exon | 90804794 | 90805348 | 90804794 | ID=Msa0436920-mRNA-1:exon:27067;Parent=Msa0436920-mRNA-1 |
| chr3_2 | exon | 90805686 | 90805852 | 90805686 | ID=Msa0436920-mRNA-1:exon:27066;Parent=Msa0436920-mRNA-1 |
| chr3_2 | exon | 90806902 | 90807061 | 90806902 | ID=Msa0436920-mRNA-1:exon:27065;Parent=Msa0436920-mRNA-1 |
| chr3_2 | exon | 90807168 | 90807226 | 90807168 | ID=Msa0436920-mRNA-1:exon:27064;Parent=Msa0436920-mRNA-1 |
| chr3_2 | exon | 90807503 | 90807608 | 90807503 | ID=Msa0436920-mRNA-1:exon:27063;Parent=Msa0436920-mRNA-1 |
| chr3_2 | exon | 90808288 | 90808425 | 90808288 | ID=Msa0436920-mRNA-1:exon:27062;Parent=Msa0436920-mRNA-1 |
| chr3_2 | exon | 90809669 | 90809734 | 90809669 | ID=Msa0436920-mRNA-1:exon:27061;Parent=Msa0436920-mRNA-1 |
| chr3_2 | exon | 90809856 | 90809966 | 90809856 | ID=Msa0436920-mRNA-1:exon:27060;Parent=Msa0436920-mRNA-1 |
| chr3_2 | CDS | 90809856 | 90809966 | 90809856 | ID=Msa0436920-mRNA-1:cds;Parent=Msa0436920-mRNA-1 |
| chr3_2 | CDS | 90809669 | 90809734 | 90809669 | ID=Msa0436920-mRNA-1:cds;Parent=Msa0436920-mRNA-1 |
| chr3_2 | CDS | 90808288 | 90808425 | 90808288 | ID=Msa0436920-mRNA-1:cds;Parent=Msa0436920-mRNA-1 |
| chr3_2 | CDS | 90807503 | 90807608 | 90807503 | ID=Msa0436920-mRNA-1:cds;Parent=Msa0436920-mRNA-1 |
| chr3_2 | CDS | 90807168 | 90807226 | 90807168 | ID=Msa0436920-mRNA-1:cds;Parent=Msa0436920-mRNA-1 |
| chr3_2 | CDS | 90806902 | 90807061 | 90806902 | ID=Msa0436920-mRNA-1:cds;Parent=Msa0436920-mRNA-1 |
| chr3_2 | CDS | 90805686 | 90805852 | 90805686 | ID=Msa0436920-mRNA-1:cds;Parent=Msa0436920-mRNA-1 |
| chr3_2 | CDS | 90805022 | 90805348 | 90805022 | ID=Msa0436920-mRNA-1:cds;Parent=Msa0436920-mRNA-1 |
| chr3_2 | three_prime_UTR | 90804794 | 90805021 | 90804794 | ID=Msa0436920-mRNA-1:three_prime_utr;Parent=Msa0436920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
