AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0171410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171410 MtrunA17_Chr1g0189611 63.396 265 51 3 133 351 1 265 7.60e-101 303
Msa0171410 MtrunA17_Chr1g0189611 83.453 139 19 3 351 488 130 265 5.15e-73 231
Msa0171410 MtrunA17_Chr1g0189611 69.504 141 24 4 2 128 130 265 5.02e-52 177
Msa0171410 MtrunA17_Chr1g0189641 58.608 273 59 4 133 351 1 273 7.89e-93 283
Msa0171410 MtrunA17_Chr1g0189641 57.143 147 54 3 351 488 127 273 1.80e-42 152
Msa0171410 MtrunA17_Chr1g0189641 51.678 149 48 3 2 128 127 273 4.95e-36 134
Msa0171410 MtrunA17_Chr1g0189721 58.491 265 64 4 133 351 1 265 2.62e-91 279
Msa0171410 MtrunA17_Chr1g0189721 73.050 141 33 3 351 488 127 265 8.79e-62 202
Msa0171410 MtrunA17_Chr1g0189721 63.830 141 35 2 2 128 127 265 5.45e-50 171
Msa0171410 MtrunA17_Chr1g0189821 58.271 266 64 5 133 351 1 266 3.35e-86 266
Msa0171410 MtrunA17_Chr1g0189821 68.794 141 37 3 351 488 130 266 1.17e-55 186
Msa0171410 MtrunA17_Chr1g0189821 63.571 140 37 2 2 129 130 267 1.07e-47 166
Msa0171410 MtrunA17_Chr1g0189671 55.515 272 68 5 133 351 1 272 5.00e-86 265
Msa0171410 MtrunA17_Chr1g0189671 63.699 146 45 4 351 488 127 272 7.89e-51 174
Msa0171410 MtrunA17_Chr1g0189671 54.000 150 46 2 2 130 127 274 3.99e-41 148
Msa0171410 MtrunA17_Chr1g0203281 55.797 276 61 6 133 351 1 272 5.89e-85 263
Msa0171410 MtrunA17_Chr1g0203281 65.068 146 43 2 351 488 127 272 5.80e-55 185
Msa0171410 MtrunA17_Chr1g0203281 58.389 149 37 3 2 128 127 272 1.95e-43 154
Msa0171410 MtrunA17_Chr1g0189621 58.491 265 63 6 133 351 1 264 3.65e-82 255
Msa0171410 MtrunA17_Chr1g0189621 80.576 139 15 1 2 128 126 264 1.32e-69 223
Msa0171410 MtrunA17_Chr1g0189621 70.629 143 33 4 351 488 126 264 4.25e-56 187
Msa0171410 MtrunA17_Chr1g0189541 89.130 138 11 1 351 488 51 184 2.76e-81 250
Msa0171410 MtrunA17_Chr1g0189541 64.029 139 33 4 2 128 51 184 1.49e-47 162
Msa0171410 MtrunA17_Chr1g0189541 54.491 167 60 4 200 351 19 184 1.88e-43 151
Msa0171410 MtrunA17_Chr3g0097191 54.478 268 76 6 129 352 3 268 1.23e-79 249
Msa0171410 MtrunA17_Chr3g0097191 60.993 141 48 4 351 488 131 267 1.36e-44 157
Msa0171410 MtrunA17_Chr3g0097191 53.237 139 51 2 2 128 131 267 5.13e-36 134
Msa0171410 MtrunA17_Chr1g0189751 55.351 271 75 4 133 357 1 271 1.40e-77 244
Msa0171410 MtrunA17_Chr1g0189751 70.629 143 33 4 351 488 127 265 6.72e-57 191
Msa0171410 MtrunA17_Chr1g0189751 58.741 143 43 2 2 130 127 267 2.00e-43 155
Msa0171410 MtrunA17_Chr7g0260801 50.916 273 83 7 126 351 6 274 4.90e-73 232
Msa0171410 MtrunA17_Chr7g0260801 57.447 141 53 3 351 488 138 274 2.42e-42 152
Msa0171410 MtrunA17_Chr7g0260801 53.191 141 52 2 2 130 138 276 1.74e-35 133
Msa0171410 MtrunA17_Chr1g0203331 54.357 241 55 3 152 337 5 245 2.51e-72 229
Msa0171410 MtrunA17_Chr1g0203331 61.194 134 42 3 351 474 112 245 1.04e-43 154
Msa0171410 MtrunA17_Chr1g0203331 54.545 132 33 2 2 108 112 241 9.19e-34 127
Msa0171410 MtrunA17_Chr1g0189661 51.439 278 76 7 133 351 1 278 3.77e-72 231
Msa0171410 MtrunA17_Chr1g0189661 55.556 153 46 2 2 132 130 282 4.28e-42 152
Msa0171410 MtrunA17_Chr1g0189661 57.047 149 53 5 351 488 130 278 4.46e-42 152
Msa0171410 MtrunA17_Chr3g0095261 50.000 284 80 7 129 352 3 284 9.91e-71 226
Msa0171410 MtrunA17_Chr3g0095261 63.934 122 37 4 370 488 166 283 4.18e-39 143
Msa0171410 MtrunA17_Chr3g0095261 52.941 119 46 2 20 128 165 283 9.50e-31 120
Msa0171410 MtrunA17_Chr1g0190071 49.822 281 79 5 133 351 1 281 1.93e-70 226
Msa0171410 MtrunA17_Chr1g0190071 54.967 151 55 3 351 488 131 281 9.32e-41 147
Msa0171410 MtrunA17_Chr1g0190071 49.677 155 50 2 2 130 131 283 3.18e-35 132
Msa0171410 MtrunA17_Chr1g0157451 49.470 283 79 7 133 351 1 283 7.47e-70 224
Msa0171410 MtrunA17_Chr1g0157451 57.718 149 52 5 351 488 135 283 2.70e-43 155
Msa0171410 MtrunA17_Chr1g0157451 55.629 151 45 2 2 130 135 285 7.61e-41 148
Msa0171410 MtrunA17_Chr1g0189711 48.561 278 81 6 133 351 1 275 8.35e-68 218
Msa0171410 MtrunA17_Chr1g0189711 52.083 144 52 4 2 128 132 275 9.30e-33 125
Msa0171410 MtrunA17_Chr1g0189711 52.027 148 57 7 351 488 132 275 4.13e-32 124
Msa0171410 MtrunA17_Chr3g0078331 46.104 308 82 7 128 351 8 315 1.31e-67 219
Msa0171410 MtrunA17_Chr3g0078331 52.147 163 53 4 351 488 153 315 2.94e-38 142
Msa0171410 MtrunA17_Chr3g0078331 48.193 166 46 4 2 129 153 316 4.87e-35 133
Msa0171410 MtrunA17_Chr1g0189701 46.528 288 85 8 132 351 31 317 8.24e-59 196
Msa0171410 MtrunA17_Chr1g0189701 46.667 150 56 4 2 128 169 317 1.48e-28 115
Msa0171410 MtrunA17_Chr1g0189701 47.403 154 60 6 351 488 169 317 8.40e-27 110
Msa0171410 MtrunA17_Chr1g0189781 44.403 268 99 6 134 351 6 273 7.42e-56 187
Msa0171410 MtrunA17_Chr1g0189781 54.167 144 55 5 351 488 135 273 1.24e-32 125
Msa0171410 MtrunA17_Chr1g0189781 46.853 143 58 3 2 129 135 274 2.07e-29 116
Msa0171410 MtrunA17_Chr1g0189651 61.871 139 41 4 351 488 52 179 4.63e-45 155
Msa0171410 MtrunA17_Chr1g0189651 53.804 184 35 5 212 351 2 179 1.08e-44 154
Msa0171410 MtrunA17_Chr1g0189651 53.957 139 41 5 2 128 52 179 5.81e-28 109
Msa0171410 MtrunA17_Chr1g0188311 61.940 134 36 2 352 470 22 155 6.11e-45 154
Msa0171410 MtrunA17_Chr1g0188311 52.941 136 32 2 3 108 22 155 2.48e-35 129
Msa0171410 MtrunA17_Chr1g0188311 51.493 134 34 2 231 333 22 155 1.80e-31 118
Msa0171410 MtrunA17_Chr1g0189591 38.095 294 104 8 136 351 13 306 1.08e-44 159
Msa0171410 MtrunA17_Chr1g0189591 39.053 169 70 6 351 488 140 306 2.90e-21 94.4
Msa0171410 MtrunA17_Chr1g0189591 34.132 167 70 3 2 128 140 306 2.16e-18 85.9
Msa0171410 MtrunA17_Chr1g0189531 86.517 89 12 0 131 219 62 150 1.78e-44 155
Msa0171410 MtrunA17_Chr7g0272091 37.367 281 111 8 134 351 5 283 2.92e-41 149
Msa0171410 MtrunA17_Chr7g0272091 42.105 152 74 5 351 488 132 283 2.18e-24 102
Msa0171410 MtrunA17_Chr7g0272091 41.558 154 61 5 2 128 132 283 3.94e-20 90.5
Msa0171410 MtrunA17_Chr1g0192371 32.971 276 127 6 134 351 6 281 1.31e-39 144
Msa0171410 MtrunA17_Chr1g0192371 38.926 149 79 5 351 488 134 281 9.63e-19 86.3
Msa0171410 MtrunA17_Chr1g0192371 36.667 150 70 6 2 128 134 281 2.95e-15 76.3
Msa0171410 MtrunA17_Chr2g0317291 56.522 138 55 3 351 485 77 212 7.49e-39 140
Msa0171410 MtrunA17_Chr2g0317291 47.973 148 61 2 2 135 77 222 7.22e-33 124
Msa0171410 MtrunA17_Chr2g0317291 44.633 177 52 5 220 350 38 214 1.61e-30 118
Msa0171410 MtrunA17_Chr2g0300961 67.000 100 31 2 133 230 1 100 7.92e-35 127
Msa0171410 MtrunA17_Chr1g0189771 43.750 176 64 3 123 265 1 174 2.36e-34 127
Msa0171410 MtrunA17_Chr7g0272101 36.364 264 119 10 136 354 1 260 4.51e-33 126
Msa0171410 MtrunA17_Chr7g0272101 36.957 138 72 4 2 128 124 257 2.41e-15 75.9
Msa0171410 MtrunA17_Chr7g0272101 37.063 143 76 6 351 488 124 257 2.52e-15 75.9
Msa0171410 MtrunA17_Chr3g0102081 57.143 105 41 1 351 455 23 123 2.36e-32 120
Msa0171410 MtrunA17_Chr3g0102081 50.495 101 38 1 230 318 23 123 2.38e-23 95.1
Msa0171410 MtrunA17_Chr3g0102081 51.456 103 36 2 2 92 23 123 4.36e-23 94.4
Msa0171410 MtrunA17_Chr1g0189631 59.375 96 29 1 370 455 2 97 5.77e-29 110
Msa0171410 MtrunA17_Chr1g0189631 45.714 105 31 1 248 326 1 105 6.00e-18 79.7
Msa0171410 MtrunA17_Chr4g0010881 35.060 251 114 8 136 351 1 237 2.13e-28 112
Msa0171410 MtrunA17_Chr4g0010881 35.938 128 67 3 2 128 124 237 1.21e-14 73.6
Msa0171410 MtrunA17_Chr3g0143881 52.727 110 48 3 20 128 1 107 7.09e-27 104
Msa0171410 MtrunA17_Chr3g0143881 50.467 107 50 3 248 351 1 107 5.71e-25 99.0
Msa0171410 MtrunA17_Chr3g0143881 48.760 121 45 4 370 488 2 107 6.76e-25 99.0
Msa0171410 MtrunA17_Chr7g0260811 49.206 126 31 3 189 285 38 159 5.45e-21 90.1
Msa0171410 MtrunA17_Chr7g0260811 61.017 59 23 0 351 409 104 162 1.41e-15 74.7
Msa0171410 MtrunA17_Chr1g0189571 38.037 163 76 5 351 488 43 205 1.81e-20 89.7
Msa0171410 MtrunA17_Chr1g0189571 35.542 166 65 4 2 128 43 205 4.24e-19 85.9
Msa0171410 MtrunA17_Chr1g0189761 67.857 56 18 0 73 128 39 94 1.09e-17 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171410 AT1G80110.1 40.000 255 105 7 139 349 4 254 1.23e-43 155
Msa0171410 AT1G80110.1 37.762 143 64 3 2 127 121 255 1.41e-19 88.6
Msa0171410 AT1G80110.1 39.007 141 76 6 351 487 121 255 6.15e-17 80.9
Msa0171410 AT2G02250.1 37.452 259 114 6 136 349 47 302 1.45e-42 154
Msa0171410 AT2G02250.1 36.879 141 80 4 351 487 168 303 1.23e-19 90.1
Msa0171410 AT2G02250.1 38.194 144 69 4 2 130 168 306 1.23e-16 81.3
Msa0171410 AT2G02360.1 37.066 259 117 7 134 349 12 267 3.62e-41 149
Msa0171410 AT2G02360.1 40.972 144 69 6 351 487 134 268 9.61e-25 103
Msa0171410 AT2G02360.1 40.426 141 67 4 2 129 134 270 1.42e-23 100
Msa0171410 AT2G02240.1 34.615 260 123 5 134 349 59 315 7.68e-38 141
Msa0171410 AT2G02240.1 35.000 140 84 3 351 487 181 316 1.51e-18 87.0
Msa0171410 AT2G02240.1 35.172 145 74 4 2 131 181 320 1.02e-15 78.6
Msa0171410 AT2G02340.1 33.574 277 123 7 129 349 29 300 2.22e-36 137
Msa0171410 AT2G02340.1 40.136 147 75 6 351 487 158 301 3.64e-20 91.3
Msa0171410 AT2G02340.1 38.194 144 71 4 2 127 158 301 1.24e-17 84.0
Msa0171410 AT2G02320.1 34.733 262 121 8 135 349 39 297 8.92e-34 129
Msa0171410 AT2G02320.1 35.664 143 71 4 6 130 162 301 2.14e-16 80.5
Msa0171410 AT2G02320.1 36.620 142 76 6 355 487 162 298 1.07e-13 72.4
Msa0171410 AT2G02230.1 31.596 307 118 10 132 349 28 331 1.71e-33 129
Msa0171410 AT2G02350.2 32.601 273 132 7 126 349 12 281 5.13e-32 124
Msa0171410 AT2G02350.2 35.374 147 76 6 351 487 145 282 7.86e-15 75.5
Msa0171410 AT2G02350.2 33.571 140 81 3 2 129 145 284 1.51e-14 74.7
Msa0171410 AT1G09155.1 35.484 279 113 10 139 351 3 280 4.95e-31 122
Msa0171410 AT1G09155.1 39.623 159 74 7 351 488 123 280 3.37e-21 94.0
Msa0171410 AT5G24560.1 33.333 219 116 6 135 351 2 192 6.00e-28 110
Msa0171410 AT1G56240.1 32.852 277 119 8 139 349 4 279 6.56e-28 113
Msa0171410 AT1G56240.1 38.854 157 76 7 351 487 124 280 6.28e-19 87.4
Msa0171410 AT1G56240.1 33.129 163 66 4 2 127 124 280 2.49e-16 79.7
Msa0171410 AT2G02310.1 30.943 265 133 6 134 351 43 304 1.23e-27 112
Msa0171410 AT2G02310.1 34.286 140 77 3 3 128 166 304 3.90e-14 73.6
Msa0171410 AT2G02310.1 31.250 144 87 5 352 488 166 304 2.70e-11 65.1
Msa0171410 AT1G56250.1 32.975 279 120 8 139 351 4 281 1.96e-27 111
Msa0171410 AT1G56250.1 37.975 158 78 7 351 488 124 281 9.84e-18 84.0
Msa0171410 AT1G56250.1 35.000 160 69 4 2 128 124 281 2.84e-16 79.7
Msa0171410 AT2G02300.1 33.588 262 126 10 130 351 28 281 8.88e-27 109
Msa0171410 AT2G02300.1 32.886 149 67 4 351 488 155 281 4.35e-13 70.1
Msa0171410 AT2G02300.1 31.618 136 81 6 2 131 155 284 7.44e-11 63.5
Msa0171410 AT2G02350.1 35.374 147 76 6 351 487 28 165 6.67e-16 76.3
Msa0171410 AT2G02350.1 33.571 140 81 3 2 129 28 167 2.52e-15 74.3
Msa0171410 AT2G02350.1 34.307 137 73 4 230 349 28 164 2.03e-13 68.9

Find 124 sgRNAs with CRISPR-Local

Find 1452 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAACTTCTTCATCTTCT+AGG 0.152668 1_4:+56156471 None:intergenic
TAAGCTACATATTGAGTATT+TGG 0.155982 1_4:+56133786 None:intergenic
TCATTTGGACTTCATCTTCT+AGG 0.223128 1_4:+56143326 None:intergenic
AGCTGCATACTGAGTGTTTC+GGG 0.254063 1_4:+56156715 None:intergenic
TCCACTTCCACTTCCACATT+TGG 0.287872 1_4:+56133657 None:intergenic
TAAGCCGCATACTGAGTATT+TGG 0.291931 1_4:+56143562 None:intergenic
AAGCTACATATTGAGTATTT+GGG 0.301800 1_4:+56133787 None:intergenic
TGCCAACGTTTCAACCAAAA+AGG 0.305707 1_4:-56153678 Msa0171410:CDS
ATCGGGGAGTTCTTCAATTC+AGG 0.310472 1_4:-56143349 Msa0171410:CDS
ATCGGGGAGTTCTTCAATTC+AGG 0.312491 1_4:-56156494 Msa0171410:CDS
CTGTCTCCTTAGCATTCATT+TGG 0.323478 1_4:+56143311 None:intergenic
TCAAGAAGTTGAGCAACTTC+AGG 0.327041 1_4:+56133858 None:intergenic
GATAACACCACGGGATAGTT+TGG 0.336653 1_4:+56156650 None:intergenic
ACAAGAAGCTCAGCGACTTC+AGG 0.347960 1_4:+56156785 None:intergenic
AGGAGTCGTGCGAGAGAGTA+TGG 0.358121 1_4:+56153823 None:intergenic
GCTTAATGGTCTTCTTACTT+AGG 0.362139 1_4:+56133456 None:intergenic
CTTGTGTTCAAGATGATTGA+TGG 0.366427 1_4:-56156689 Msa0171410:CDS
TGACCATGATCGATGATGAT+AGG 0.382423 1_4:+56153629 None:intergenic
GGGTGGTTGGAGATTGAAAT+GGG 0.384436 1_4:-56133579 Msa0171410:CDS
TTGTTGAAGGAATAGAAGTT+AGG 0.389505 1_4:-56133479 Msa0171410:CDS
TTGTTGAAGGAATAGAAGTT+AGG 0.389505 1_4:-56143267 Msa0171410:CDS
AGAAGTTCAAATGAATATAA+AGG 0.393045 1_4:-56156459 Msa0171410:CDS
ATGCTAAGGAGACAGATTAT+TGG 0.394394 1_4:-56143303 Msa0171410:CDS
GAGAATCTGCCAACGTCAAT+AGG 0.399491 1_4:+56153803 None:intergenic
TGAAATGCAGAGCTTTCAAT+TGG 0.399907 1_4:-56153210 Msa0171410:intron
GGGTGGTTGGAGATTGAAAT+CGG 0.403576 1_4:-56156512 Msa0171410:CDS
AAGCTGCATACTGAGTGTTT+CGG 0.411984 1_4:+56156714 None:intergenic
AAGTGTGGTCTCTTTCTTGA+AGG 0.415452 1_4:-56156416 Msa0171410:CDS
TTCTTGAAGGAATCGAAGTT+AGG 0.415583 1_4:-56156403 Msa0171410:CDS
CCGCCGATTCTGATGATGTC+TGG 0.418266 1_4:-56153754 Msa0171410:CDS
AGGACAGTTCTGAAATCCTT+TGG 0.419572 1_4:+56133740 None:intergenic
TAGTACTAAAATTGTCTGTT+TGG 0.420764 1_4:-56133682 Msa0171410:CDS
AAGAAAGGTCTCTTTGTTGA+AGG 0.425025 1_4:-56143280 Msa0171410:CDS
ATGTTAAGGAGCTACATCTT+TGG 0.426392 1_4:-56133515 Msa0171410:CDS
ACACCAACTGATAACTCTAT+AGG 0.434068 1_4:+56133720 None:intergenic
AAGAGTGGTCTCTTTGTTGA+AGG 0.440904 1_4:-56133492 Msa0171410:CDS
ATGGTGGCAATACACTCTTC+AGG 0.440956 1_4:+56153842 None:intergenic
GAGTATTTGGGGACAAGCTA+AGG 0.444858 1_4:+56133799 None:intergenic
CTCAACTTCTTGAAGTGTGG+TGG 0.449215 1_4:-56133848 Msa0171410:CDS
TTCAATTCAGGCTTAGAAGA+TGG 0.449517 1_4:-56133552 Msa0171410:CDS
ACGTGAGTAGCGATGGGTGG+TGG 0.453320 1_4:-56143381 Msa0171410:CDS
GGTGGTTGGAGATTGAAATC+GGG 0.460102 1_4:-56156511 Msa0171410:CDS
TGGGTGGTTGGAGATTGAAA+TGG 0.464905 1_4:-56133580 Msa0171410:CDS
CAAGAAGTTGAGCAACTTCA+GGG 0.466659 1_4:+56133859 None:intergenic
GGTGGTGGGAGATTGAGATC+GGG 0.471690 1_4:-56143366 Msa0171410:CDS
CAAGAAGCTCAGCGACTTCA+GGG 0.475210 1_4:+56156786 None:intergenic
CGGCCTAGTGTGAGAAGCGA+TGG 0.477390 1_4:-56156533 Msa0171410:CDS
GAGACAGATTATTGGAAGAA+AGG 0.484106 1_4:-56143295 Msa0171410:CDS
CGTCCTAGTGTGAGAAGCGA+TGG 0.485861 1_4:-56133600 Msa0171410:CDS
CATCATCGATCATGGTCAAA+AGG 0.487205 1_4:-56153624 Msa0171410:intron
TGGAAGTGGAAGTGGAAGGT+AGG 0.493027 1_4:-56133650 Msa0171410:CDS
GTAGCTCCTTAACATTCATC+AGG 0.499214 1_4:+56133523 None:intergenic
CGTCCTAACGTGAGTAGCGA+TGG 0.500422 1_4:-56143388 Msa0171410:CDS
CGTCCTATCATCATCGATCA+TGG 0.502262 1_4:-56153632 Msa0171410:CDS
TGGATTTCATAACTATCCTC+TGG 0.502684 1_4:-56143512 Msa0171410:CDS
GGGTGGTGGGAGATTGAGAT+CGG 0.504022 1_4:-56143367 Msa0171410:CDS
AGACGTCCTGATGAATGTTA+AGG 0.504428 1_4:-56133529 Msa0171410:CDS
TCCAAATGTGGAAGTGGAAG+TGG 0.508630 1_4:-56133658 Msa0171410:CDS
ATTCCAGACATCATCAGAAT+CGG 0.524392 1_4:+56153751 None:intergenic
AGACGAAGATAAGCAACCTC+GGG 0.524428 1_4:+56143634 None:intergenic
TTCAAGATGATTGATGGCTA+TGG 0.530465 1_4:-56156683 Msa0171410:CDS
GTTGAAACGTTGGCAAGTGA+AGG 0.536471 1_4:+56153686 None:intergenic
AGGCAGCATGACAGAGCAGT+AGG 0.538263 1_4:-56133630 Msa0171410:CDS
AGGATAGATGATATGTCAGA+AGG 0.538301 1_4:+56153719 None:intergenic
CGTGAGTAGCGATGGGTGGT+GGG 0.540421 1_4:-56143380 Msa0171410:CDS
CACCCATCGCTTCTCACACT+AGG 0.543006 1_4:+56133597 None:intergenic
GAGTTATCAGTTGGTGTCGA+AGG 0.545216 1_4:-56133714 Msa0171410:CDS
CACCCATCGCTTCTCACACT+AGG 0.546742 1_4:+56156530 None:intergenic
GAGGATAGTTATGAAATCCA+TGG 0.547695 1_4:+56143515 None:intergenic
CTTATCTTCGTCTTGTGTGG+TGG 0.548731 1_4:-56143624 Msa0171410:CDS
GTGTGGTGGCTTGATATTAG+TGG 0.549830 1_4:-56133834 Msa0171410:CDS
TGTGGTGGCGTGATATTCGT+TGG 0.560710 1_4:-56143609 Msa0171410:CDS
CAGATCGAAAAGTCTTAGAA+AGG 0.566445 1_4:+56153777 None:intergenic
TTTCAATTGGATAGAAAGAG+TGG 0.567809 1_4:-56153197 Msa0171410:CDS
TTGCTTATCTTCGTCTTGTG+TGG 0.567818 1_4:-56143627 Msa0171410:CDS
TTTGGATCCAAATGTGGAAG+TGG 0.569537 1_4:-56133664 Msa0171410:CDS
GGGCAACATAACAGCGCAGT+AGG 0.570300 1_4:-56156563 Msa0171410:CDS
CACCCATCGCTACTCACGTT+AGG 0.571484 1_4:+56143385 None:intergenic
GTGTTATCAATTTGTGTCGA+AGG 0.573911 1_4:-56156635 Msa0171410:CDS
TGTGAGAAGCGATGGGTGGT+TGG 0.576323 1_4:-56133592 Msa0171410:CDS
TGTGAGAAGCGATGGGTGGT+TGG 0.576323 1_4:-56156525 Msa0171410:CDS
TCGAAAAGTCTTAGAAAGGA+CGG 0.577239 1_4:+56153781 None:intergenic
TGAAGTCCAAATGAATGCTA+AGG 0.577403 1_4:-56143317 Msa0171410:CDS
AGTATTTGGGGACAAGCTAA+GGG 0.583185 1_4:+56133800 None:intergenic
TTGCTCAACTTCTTGAAGTG+TGG 0.594620 1_4:-56133851 Msa0171410:CDS
GAGTTATCAGTTGGTGTCAG+AGG 0.596265 1_4:-56143490 Msa0171410:CDS
TATCCTCTGGAGTTATCAGT+TGG 0.596470 1_4:-56143499 Msa0171410:CDS
AGGATAGTTATGAAATCCAT+GGG 0.604556 1_4:+56143516 None:intergenic
ACACAAATTGATAACACCAC+GGG 0.605212 1_4:+56156641 None:intergenic
TTATCAGTTGGTGTCGAAGG+TGG 0.607167 1_4:-56133711 Msa0171410:CDS
TTATCAATTTGTGTCGAAGG+TGG 0.608233 1_4:-56156632 Msa0171410:CDS
GAGCTACATCTTTGGAAGAG+TGG 0.609596 1_4:-56133507 Msa0171410:CDS
AGCTACATATTGAGTATTTG+GGG 0.610866 1_4:+56133788 None:intergenic
GTGGTTGGAGATTGAAATCG+GGG 0.611248 1_4:-56156510 Msa0171410:CDS
AAGACGAAGATAAGCAACCT+CGG 0.612024 1_4:+56143633 None:intergenic
TTGGTGTCAGAGGTAGCCGT+AGG 0.618101 1_4:-56143480 Msa0171410:CDS
GTCCTAACGTGAGTAGCGAT+GGG 0.619553 1_4:-56143387 Msa0171410:CDS
GTGGTTGGAGATTGAAATGG+GGG 0.620504 1_4:-56133577 Msa0171410:CDS
GTCTCCAAATACTCAGTATG+CGG 0.620795 1_4:-56143566 Msa0171410:CDS
GTGGTGGGAGATTGAGATCG+GGG 0.621127 1_4:-56143365 Msa0171410:CDS
GATGATTATAATTCGAAGTG+TGG 0.621156 1_4:-56156431 Msa0171410:CDS
TGTCTGTTTGGATCCAAATG+TGG 0.625217 1_4:-56133670 Msa0171410:CDS
TGTCCTATAGAGTTATCAGT+TGG 0.629309 1_4:-56133723 Msa0171410:CDS
GTCCTAGTGTGAGAAGCGAT+GGG 0.643186 1_4:-56133599 Msa0171410:CDS
GGCCTAGTGTGAGAAGCGAT+GGG 0.643186 1_4:-56156532 Msa0171410:CDS
GGTGGTTGGAGATTGAAATG+GGG 0.648046 1_4:-56133578 Msa0171410:CDS
CCAGACATCATCAGAATCGG+CGG 0.648846 1_4:+56153754 None:intergenic
TTCAAGATGAATGATGCCCA+TGG 0.649387 1_4:-56143532 Msa0171410:CDS
ATACTGAGTATTTGGAGACA+AGG 0.649595 1_4:+56143570 None:intergenic
TGTGGTGGCTTGATATTAGT+GGG 0.653180 1_4:-56133833 Msa0171410:CDS
TTCAAGATGATTGATGCCAA+AGG 0.654531 1_4:-56133756 Msa0171410:CDS
CAAGTGAAGGAGACTGTGAG+AGG 0.655481 1_4:+56153699 None:intergenic
CGCACGACTCCTATTGACGT+TGG 0.658635 1_4:-56153812 Msa0171410:CDS
ACAGCGCAGTAGGATTGCAA+CGG 0.659500 1_4:-56156553 Msa0171410:CDS
GACACAAATTGATAACACCA+CGG 0.662112 1_4:+56156640 None:intergenic
CTAACGTGAGTAGCGATGGG+TGG 0.667784 1_4:-56143384 Msa0171410:CDS
TGTGCTGGACAGGTTCCCCG+AGG 0.682900 1_4:-56143650 Msa0171410:intron
TCAGAATCCAAACTATCCCG+TGG 0.688070 1_4:-56156657 Msa0171410:CDS
CTAGTGTGAGAAGCGATGGG+TGG 0.709944 1_4:-56133596 Msa0171410:CDS
CTAGTGTGAGAAGCGATGGG+TGG 0.709944 1_4:-56156529 Msa0171410:CDS
ACACCAACTGATAACTCCAG+AGG 0.711598 1_4:+56143496 None:intergenic
AATGTGGAAGTGGAAGTGGA+AGG 0.722814 1_4:-56133654 Msa0171410:CDS
GACGAAGATAAGCAACCTCG+GGG 0.723762 1_4:+56143635 None:intergenic
AGTCGTGCGAGAGAGTATGG+TGG 0.752827 1_4:+56153826 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATAATTAAATAAAA+AGG - chr1_4:56144556-56144575 Msa0171410:intron 0.0%
!!! TATTATAATTTTATTTATTA+AGG - chr1_4:56151737-56151756 Msa0171410:intron 0.0%
!!! TATTATAATTTTATTTATTA+AGG - chr1_4:56151737-56151756 Msa0171410:intron 0.0%
!!! TATTATAATTTTATTTATTA+AGG - chr1_4:56151737-56151756 Msa0171410:intron 0.0%
!!! TATTATAATTTTATTTATTA+AGG - chr1_4:56151737-56151756 Msa0171410:intron 0.0%
!!! TATTATAATTTTATTTATTA+AGG - chr1_4:56151737-56151756 Msa0171410:intron 0.0%
!!! TATTATAATTTTATTTATTA+AGG - chr1_4:56151737-56151756 Msa0171410:intron 0.0%
!! TTATTGTGATTTAATATATT+GGG - chr1_4:56135185-56135204 Msa0171410:intron 10.0%
!!! GTATTTTTGTAAAAAAATTA+GGG + chr1_4:56136809-56136828 None:intergenic 10.0%
!!! AGTATTTTTGTAAAAAAATT+AGG + chr1_4:56136810-56136829 None:intergenic 10.0%
!! ATAATTTAAAGAAATTTCAA+TGG + chr1_4:56137438-56137457 None:intergenic 10.0%
!! TATTTATATGATGTATATAA+GGG + chr1_4:56144515-56144534 None:intergenic 10.0%
!! ATATTTATATGATGTATATA+AGG + chr1_4:56144516-56144535 None:intergenic 10.0%
!! AAAATAATTAAATAAAAAGG+AGG - chr1_4:56144559-56144578 Msa0171410:intron 10.0%
!! AAATAATTAAATAAAAAGGA+GGG - chr1_4:56144560-56144579 Msa0171410:intron 10.0%
!!! AAATAATTTAGTTATCATTT+TGG - chr1_4:56147587-56147606 Msa0171410:intron 10.0%
!! TATTAAGACAAAATTATATT+AGG - chr1_4:56148425-56148444 Msa0171410:intron 10.0%
!! ATTAAGACAAAATTATATTA+GGG - chr1_4:56148426-56148445 Msa0171410:intron 10.0%
!!! TTTTGTTTTTTTGAAAAAAA+AGG + chr1_4:56148680-56148699 None:intergenic 10.0%
!! TTTAATAAAAAATGAGAAAA+AGG + chr1_4:56149304-56149323 None:intergenic 10.0%
!! TTTATTAAACAAATAGATAA+AGG - chr1_4:56149340-56149359 Msa0171410:intron 10.0%
!!! TTAAAAAAAATTAGTTTGTT+TGG - chr1_4:56149744-56149763 Msa0171410:intron 10.0%
!!! TAAAAAAAATTAGTTTGTTT+GGG - chr1_4:56149745-56149764 Msa0171410:intron 10.0%
!!! AAAAAAAGTGATTTTTATTA+CGG + chr1_4:56150089-56150108 None:intergenic 10.0%
!!! TATAACCATTATTTTTTTAA+GGG - chr1_4:56150945-56150964 Msa0171410:intron 10.0%
!! AAATTATGAATTTACTTTAA+AGG + chr1_4:56151874-56151893 None:intergenic 10.0%
!!! ATAATTTTGAATAGAATTTT+GGG - chr1_4:56151887-56151906 Msa0171410:intron 10.0%
!! AAATTATGAATTTACTTTAA+AGG + chr1_4:56151874-56151893 None:intergenic 10.0%
!!! ATAATTTTGAATAGAATTTT+GGG - chr1_4:56151887-56151906 Msa0171410:intron 10.0%
!! AGATAAAAAGTAATAAAATA+TGG + chr1_4:56153095-56153114 None:intergenic 10.0%
!! AAATTATGAATTTACTTTAA+AGG + chr1_4:56151874-56151893 None:intergenic 10.0%
!!! ATAATTTTGAATAGAATTTT+GGG - chr1_4:56151887-56151906 Msa0171410:intron 10.0%
!! AAATTATGAATTTACTTTAA+AGG + chr1_4:56151874-56151893 None:intergenic 10.0%
!!! ATAATTTTGAATAGAATTTT+GGG - chr1_4:56151887-56151906 Msa0171410:intron 10.0%
!! AAATTATGAATTTACTTTAA+AGG + chr1_4:56151874-56151893 None:intergenic 10.0%
!!! ATAATTTTGAATAGAATTTT+GGG - chr1_4:56151887-56151906 Msa0171410:intron 10.0%
!! AAATTATGAATTTACTTTAA+AGG + chr1_4:56151874-56151893 None:intergenic 10.0%
!!! ATAATTTTGAATAGAATTTT+GGG - chr1_4:56151887-56151906 Msa0171410:intron 10.0%
!! ATTGAAAAATAAATAGGATT+TGG + chr1_4:56133525-56133544 None:intergenic 15.0%
!! TGATACATTGAAAAATAAAT+AGG + chr1_4:56133531-56133550 None:intergenic 15.0%
!!! CTTTATTTGAAACTTAATTA+TGG + chr1_4:56133898-56133917 None:intergenic 15.0%
!! AGACATAATAATAATAGTTA+AGG + chr1_4:56134383-56134402 None:intergenic 15.0%
!!! TACATCTCTATTTTTTATTT+GGG + chr1_4:56134525-56134544 None:intergenic 15.0%
!!! TTACATCTCTATTTTTTATT+TGG + chr1_4:56134526-56134545 None:intergenic 15.0%
!! CTTATTGTGATTTAATATAT+TGG - chr1_4:56135184-56135203 Msa0171410:intron 15.0%
!!! TGTAACAATATTGATTTAAA+TGG - chr1_4:56135484-56135503 Msa0171410:intron 15.0%
!! TAATCAATCCATTAAAAATA+TGG + chr1_4:56135668-56135687 None:intergenic 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG + chr1_4:56136499-56136518 None:intergenic 15.0%
!!! TTTTTTTACAAAAATACTCT+TGG - chr1_4:56136812-56136831 Msa0171410:intron 15.0%
!!! TTTGTTACTTATAAGTTATA+GGG + chr1_4:56136901-56136920 None:intergenic 15.0%
!!! CTTTATTTGAAACTATATTA+CGG + chr1_4:56137310-56137329 None:intergenic 15.0%
!!! GCTTATGTTTTTTAAATTAA+TGG + chr1_4:56138062-56138081 None:intergenic 15.0%
!!! CAATTTGTTTTATTTTAATG+AGG - chr1_4:56138328-56138347 Msa0171410:intron 15.0%
!! AATTATACTTATAAATCCAA+TGG - chr1_4:56138703-56138722 Msa0171410:intron 15.0%
!!! TTAAATTGATGATGATATAT+TGG + chr1_4:56138836-56138855 None:intergenic 15.0%
!! TAAATTATTATTTATTCCGA+AGG - chr1_4:56139658-56139677 Msa0171410:intron 15.0%
!! ATCAACATAAACTAAAATTA+TGG - chr1_4:56140087-56140106 Msa0171410:intron 15.0%
!! TCAACATAAACTAAAATTAT+GGG - chr1_4:56140088-56140107 Msa0171410:intron 15.0%
!!! ACTATTATTTTCATCATTAT+CGG - chr1_4:56140142-56140161 Msa0171410:intron 15.0%
!! ATTAAAAAATTAGAATGTGA+GGG + chr1_4:56140231-56140250 None:intergenic 15.0%
!! AATTAAAAAATTAGAATGTG+AGG + chr1_4:56140232-56140251 None:intergenic 15.0%
!!! AATTATGTAATTTTTACGTT+GGG + chr1_4:56142324-56142343 None:intergenic 15.0%
!!! TAATTATGTAATTTTTACGT+TGG + chr1_4:56142325-56142344 None:intergenic 15.0%
!! TCAACAATAAAAATAATCTT+TGG - chr1_4:56142473-56142492 Msa0171410:intron 15.0%
!!! TGTTTTATGATTAATAATTG+AGG + chr1_4:56142874-56142893 None:intergenic 15.0%
!! TTTAAAAATTAAGAACTAGT+GGG + chr1_4:56144832-56144851 None:intergenic 15.0%
!!! TTTTAAAAATTAAGAACTAG+TGG + chr1_4:56144833-56144852 None:intergenic 15.0%
!!! ACTAGTTCTTAATTTTTAAA+AGG - chr1_4:56144832-56144851 Msa0171410:intron 15.0%
!!! CTAGTTCTTAATTTTTAAAA+GGG - chr1_4:56144833-56144852 Msa0171410:intron 15.0%
!!! TGATATGTTCAATTTTTATA+AGG + chr1_4:56145203-56145222 None:intergenic 15.0%
!! TTAAAAAAAAATTGGAACAA+AGG + chr1_4:56145819-56145838 None:intergenic 15.0%
!! CACTTCATTTAAAAAAAAAT+TGG + chr1_4:56145827-56145846 None:intergenic 15.0%
!! ACTTTAATAAGTAATTTCTT+CGG - chr1_4:56146239-56146258 Msa0171410:intron 15.0%
!! TAAATTATTATTTATTCCGA+AGG - chr1_4:56139658-56139677 Msa0171410:intron 15.0%
!! ATCAACATAAACTAAAATTA+TGG - chr1_4:56140087-56140106 Msa0171410:intron 15.0%
!! TCAACATAAACTAAAATTAT+GGG - chr1_4:56140088-56140107 Msa0171410:intron 15.0%
!!! ACTATTATTTTCATCATTAT+CGG - chr1_4:56140142-56140161 Msa0171410:intron 15.0%
!! ATTAAAAAAATAGAATGTGA+GGG + chr1_4:56147360-56147379 None:intergenic 15.0%
!! AATTAAAAAAATAGAATGTG+AGG + chr1_4:56147361-56147380 None:intergenic 15.0%
!! AGTTATTGAAGTTTAAATTT+GGG + chr1_4:56147477-56147496 None:intergenic 15.0%
!! TATGTTTATATTACTTATTG+TGG - chr1_4:56148307-56148326 Msa0171410:intron 15.0%
!! TTAAGACAAAATTATATTAG+GGG - chr1_4:56148427-56148446 Msa0171410:intron 15.0%
!!! CTTATTTATTTGTAACATTT+TGG - chr1_4:56149219-56149238 Msa0171410:intron 15.0%
!! GTTACAAATAAATAAGATAA+AGG - chr1_4:56149371-56149390 Msa0171410:intron 15.0%
!!! TTATAAATAAGCATTGTATT+TGG + chr1_4:56149399-56149418 None:intergenic 15.0%
!!! ATTTTTTTTGGTTGATAAAA+CGG + chr1_4:56149580-56149599 None:intergenic 15.0%
!!! TTTTTATTTTAATCCACAAA+CGG + chr1_4:56149655-56149674 None:intergenic 15.0%
!!! TTTTAAAAAGTTGTAACAAA+TGG - chr1_4:56149910-56149929 Msa0171410:intron 15.0%
!!! TTATTTTAATCCATAACAAA+CGG + chr1_4:56149999-56150018 None:intergenic 15.0%
!! TTTGAATACAACTATATAAA+AGG - chr1_4:56150132-56150151 Msa0171410:intron 15.0%
!! TTGAATACAACTATATAAAA+GGG - chr1_4:56150133-56150152 Msa0171410:intron 15.0%
!! TAAAAAAATAATGGTTATAG+TGG + chr1_4:56150944-56150963 None:intergenic 15.0%
!!! CTATAACCATTATTTTTTTA+AGG - chr1_4:56150944-56150963 Msa0171410:intron 15.0%
!! ATTAACCCTTAAAAAAATAA+TGG + chr1_4:56150953-56150972 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr1_4:56151433-56151452 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr1_4:56151211-56151230 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr1_4:56151342-56151361 Msa0171410:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr1_4:56151433-56151452 Msa0171410:intron 15.0%
!!! TAATTAACCCTTTTTTTAAA+AGG - chr1_4:56151497-56151516 Msa0171410:intron 15.0%
!!! TAATAGACCTTTTAAAAAAA+GGG + chr1_4:56151507-56151526 None:intergenic 15.0%
!!! ATAATAGACCTTTTAAAAAA+AGG + chr1_4:56151508-56151527 None:intergenic 15.0%
!!! CATAATTTTGAATAGAATTT+TGG - chr1_4:56151886-56151905 Msa0171410:intron 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr1_4:56151211-56151230 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr1_4:56151342-56151361 Msa0171410:intron 15.0%
!!! AATTAATCAAACTTTGTTTT+AGG - chr1_4:56151367-56151386 Msa0171410:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr1_4:56151433-56151452 Msa0171410:intron 15.0%
!!! TAATTAACCCTTTTTTTAAA+AGG - chr1_4:56151497-56151516 Msa0171410:intron 15.0%
!!! TAATAGACCTTTTAAAAAAA+GGG + chr1_4:56151507-56151526 None:intergenic 15.0%
!!! ATAATAGACCTTTTAAAAAA+AGG + chr1_4:56151508-56151527 None:intergenic 15.0%
!!! ATTAAGGTTAAATATGTTTT+TGG - chr1_4:56151753-56151772 Msa0171410:intron 15.0%
!!! CATAATTTTGAATAGAATTT+TGG - chr1_4:56151886-56151905 Msa0171410:intron 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr1_4:56151342-56151361 Msa0171410:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr1_4:56151433-56151452 Msa0171410:intron 15.0%
!!! TAATTAACCCTTTTTTTAAA+AGG - chr1_4:56151497-56151516 Msa0171410:intron 15.0%
!!! TAATAGACCTTTTAAAAAAA+GGG + chr1_4:56151507-56151526 None:intergenic 15.0%
!!! ATAATAGACCTTTTAAAAAA+AGG + chr1_4:56151508-56151527 None:intergenic 15.0%
!!! CATAATTTTGAATAGAATTT+TGG - chr1_4:56151886-56151905 Msa0171410:intron 15.0%
!! AAATAAATTTGAATTGAGTA+GGG + chr1_4:56153905-56153924 None:intergenic 15.0%
!! TAAATAAATTTGAATTGAGT+AGG + chr1_4:56153906-56153925 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr1_4:56151211-56151230 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr1_4:56151342-56151361 Msa0171410:intron 15.0%
!!! AATTAATCAAACTTTGTTTT+AGG - chr1_4:56151367-56151386 Msa0171410:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr1_4:56151433-56151452 Msa0171410:intron 15.0%
!!! TAATTAACCCTTTTTTTAAA+AGG - chr1_4:56151497-56151516 Msa0171410:intron 15.0%
!!! TAATAGACCTTTTAAAAAAA+GGG + chr1_4:56151507-56151526 None:intergenic 15.0%
!!! ATAATAGACCTTTTAAAAAA+AGG + chr1_4:56151508-56151527 None:intergenic 15.0%
!!! ATTAAGGTTAAATATGTTTT+TGG - chr1_4:56151753-56151772 Msa0171410:intron 15.0%
!!! CATAATTTTGAATAGAATTT+TGG - chr1_4:56151886-56151905 Msa0171410:intron 15.0%
!! ATAGCTATTAAAATTAAGTA+AGG + chr1_4:56154785-56154804 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr1_4:56151211-56151230 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr1_4:56151342-56151361 Msa0171410:intron 15.0%
!!! AATTAATCAAACTTTGTTTT+AGG - chr1_4:56151367-56151386 Msa0171410:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr1_4:56151433-56151452 Msa0171410:intron 15.0%
!!! TAATTAACCCTTTTTTTAAA+AGG - chr1_4:56151497-56151516 Msa0171410:intron 15.0%
!!! TAATAGACCTTTTAAAAAAA+GGG + chr1_4:56151507-56151526 None:intergenic 15.0%
!!! ATAATAGACCTTTTAAAAAA+AGG + chr1_4:56151508-56151527 None:intergenic 15.0%
!!! ATTAAGGTTAAATATGTTTT+TGG - chr1_4:56151753-56151772 Msa0171410:intron 15.0%
!!! CATAATTTTGAATAGAATTT+TGG - chr1_4:56151886-56151905 Msa0171410:intron 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr1_4:56151211-56151230 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr1_4:56151342-56151361 Msa0171410:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr1_4:56151433-56151452 Msa0171410:intron 15.0%
!!! TAATTAACCCTTTTTTTAAA+AGG - chr1_4:56151497-56151516 Msa0171410:intron 15.0%
!!! TAATAGACCTTTTAAAAAAA+GGG + chr1_4:56151507-56151526 None:intergenic 15.0%
!!! ATAATAGACCTTTTAAAAAA+AGG + chr1_4:56151508-56151527 None:intergenic 15.0%
!!! CATAATTTTGAATAGAATTT+TGG - chr1_4:56151886-56151905 Msa0171410:intron 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr1_4:56151211-56151230 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr1_4:56151342-56151361 Msa0171410:intron 15.0%
!!! AATTAATCAAACTTTGTTTT+AGG - chr1_4:56151367-56151386 Msa0171410:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr1_4:56151433-56151452 Msa0171410:intron 15.0%
!!! TAATTAACCCTTTTTTTAAA+AGG - chr1_4:56151497-56151516 Msa0171410:intron 15.0%
!!! TAATAGACCTTTTAAAAAAA+GGG + chr1_4:56151507-56151526 None:intergenic 15.0%
!!! ATAATAGACCTTTTAAAAAA+AGG + chr1_4:56151508-56151527 None:intergenic 15.0%
!! ATCAATTTGAACTTGAATAT+AGG + chr1_4:56133687-56133706 None:intergenic 20.0%
!!! TTTGAAACTTAATTATGGAA+GGG + chr1_4:56133893-56133912 None:intergenic 20.0%
!!! ATTTGAAACTTAATTATGGA+AGG + chr1_4:56133894-56133913 None:intergenic 20.0%
!! AGTAAATTTCAAAGAAAACA+TGG + chr1_4:56134262-56134281 None:intergenic 20.0%
!!! TTTGAAATTTACTTTTGACT+TGG - chr1_4:56134269-56134288 Msa0171410:intron 20.0%
!! AGCATATATAACTTATTAAC+CGG - chr1_4:56134414-56134433 Msa0171410:intron 20.0%
!! AGTTGCAAATATTAGAATAT+AGG + chr1_4:56134577-56134596 None:intergenic 20.0%
!! AGAAGTTCAAATGAATATAA+AGG - chr1_4:56134936-56134955 Msa0171410:intron 20.0%
!! AATTAAGTAACATACTATTC+TGG - chr1_4:56135027-56135046 Msa0171410:intron 20.0%
!! TGATTTAATATATTGGGATT+GGG - chr1_4:56135191-56135210 Msa0171410:intron 20.0%
!!! TATTCCAGTGATTTAAATTT+TGG - chr1_4:56135340-56135359 Msa0171410:intron 20.0%
!!! TTTAAATTTTGGTCTGTTTA+AGG - chr1_4:56135351-56135370 Msa0171410:intron 20.0%
!!! TTTTTCCTCCATATTTTTAA+TGG - chr1_4:56135657-56135676 Msa0171410:intron 20.0%
!!! AAATATGTGTATGATTTTAG+AGG - chr1_4:56135699-56135718 Msa0171410:intron 20.0%
!! ATCATATTTGAATGATTTGA+AGG + chr1_4:56135893-56135912 None:intergenic 20.0%
!!! TGTTTGATTTTAAATTTGGA+GGG + chr1_4:56135951-56135970 None:intergenic 20.0%
!!! ATGTTTGATTTTAAATTTGG+AGG + chr1_4:56135952-56135971 None:intergenic 20.0%
!!! TGCATGTTTGATTTTAAATT+TGG + chr1_4:56135955-56135974 None:intergenic 20.0%
!! TATTTATGTATAAGTCCAAA+AGG + chr1_4:56136389-56136408 None:intergenic 20.0%
!!! ATAAGCAAAATTCACTTTTT+AGG - chr1_4:56136508-56136527 Msa0171410:intron 20.0%
!! GATAATCACTAAAAAATGTT+CGG + chr1_4:56136852-56136871 None:intergenic 20.0%
!!! GTTTGTTACTTATAAGTTAT+AGG + chr1_4:56136902-56136921 None:intergenic 20.0%
!! ATAGCAATGAATTTATAGAA+AGG + chr1_4:56137113-56137132 None:intergenic 20.0%
!! ATGTAGATAATTAGGTAAAT+AGG - chr1_4:56137897-56137916 Msa0171410:intron 20.0%
!! TAACCTATCAAATTCTATTA+TGG - chr1_4:56138402-56138421 Msa0171410:intron 20.0%
!! AACCTATCAAATTCTATTAT+GGG - chr1_4:56138403-56138422 Msa0171410:intron 20.0%
!!! TAGCATTTTCCTATTTTAAT+TGG - chr1_4:56138528-56138547 Msa0171410:intron 20.0%
!!! GGACAATAAAAGATTTTAAT+TGG + chr1_4:56138612-56138631 None:intergenic 20.0%
!! AACTATGCATGATAAAAAAT+CGG - chr1_4:56138957-56138976 Msa0171410:intron 20.0%
!! AAACAACAATTGTTAACTTT+GGG + chr1_4:56139151-56139170 None:intergenic 20.0%
!! AAAACAACAATTGTTAACTT+TGG + chr1_4:56139152-56139171 None:intergenic 20.0%
!!! AAGTTAACAATTGTTGTTTT+TGG - chr1_4:56139152-56139171 Msa0171410:intron 20.0%
!! GAAATTCAAATATAACAGTT+TGG + chr1_4:56139182-56139201 None:intergenic 20.0%
!! AGTGATTATAATATCATAGT+TGG + chr1_4:56139522-56139541 None:intergenic 20.0%
!!! AAGATCATTCATAATTTTGA+AGG - chr1_4:56139605-56139624 Msa0171410:intron 20.0%
!!! AGATCATTCATAATTTTGAA+GGG - chr1_4:56139606-56139625 Msa0171410:intron 20.0%
!! CAACATAAACTAAAATTATG+GGG - chr1_4:56140089-56140108 Msa0171410:intron 20.0%
!!! CTATTATTTTCATCATTATC+GGG - chr1_4:56140143-56140162 Msa0171410:intron 20.0%
!!! ACCATTTTTTAAATTCAAGT+GGG + chr1_4:56140347-56140366 None:intergenic 20.0%
!!! AACCATTTTTTAAATTCAAG+TGG + chr1_4:56140348-56140367 None:intergenic 20.0%
!! TTAATTCATGAACACATAAA+GGG + chr1_4:56141012-56141031 None:intergenic 20.0%
!! ATTAATTCATGAACACATAA+AGG + chr1_4:56141013-56141032 None:intergenic 20.0%
!!! AATTTTTCATGTCATTCATT+AGG - chr1_4:56141906-56141925 Msa0171410:intron 20.0%
!! AAAAAAAAACTAAAACCTGA+TGG + chr1_4:56142225-56142244 None:intergenic 20.0%
!! ATGTTATGTGATTTATGATA+AGG + chr1_4:56142930-56142949 None:intergenic 20.0%
!!! TTTGATTATGAAGTTGTTTT+CGG + chr1_4:56143077-56143096 None:intergenic 20.0%
!!! ACCAGTTTTCATTTTAAATT+CGG - chr1_4:56144124-56144143 Msa0171410:intron 20.0%
!!! ATATTAAAACTGGTATTGAT+CGG + chr1_4:56144311-56144330 None:intergenic 20.0%
!!! CCAGTTTTAATATCAAAATT+CGG - chr1_4:56144318-56144337 Msa0171410:intron 20.0%
!!! CAGTTTTAATATCAAAATTC+GGG - chr1_4:56144319-56144338 Msa0171410:intron 20.0%
!! TTAAAAATTAAGAACTAGTG+GGG + chr1_4:56144831-56144850 None:intergenic 20.0%
!!! ATAATTTTTGTTCTTAGACT+TGG - chr1_4:56145148-56145167 Msa0171410:intron 20.0%
!!! TAATTTTTGTTCTTAGACTT+GGG - chr1_4:56145149-56145168 Msa0171410:intron 20.0%
!! AGGAAAATTGAAATTTATGA+TGG + chr1_4:56145183-56145202 None:intergenic 20.0%
!!! TTCTGATTTATATGAACTTT+TGG - chr1_4:56145346-56145365 Msa0171410:intron 20.0%
!! AAATTGTCTAATTATAACGT+TGG - chr1_4:56145395-56145414 Msa0171410:intron 20.0%
!!! AATTTTAAACTTGAGTAACT+TGG + chr1_4:56145429-56145448 None:intergenic 20.0%
!! ACTAACATTATAGGAATAAT+GGG + chr1_4:56145751-56145770 None:intergenic 20.0%
!! ATTTATCCATAATGCATTTA+GGG - chr1_4:56146208-56146227 Msa0171410:intron 20.0%
!! GAAATTCAAATATAACAGTT+TGG + chr1_4:56139182-56139201 None:intergenic 20.0%
!!! ATTCTAAAACCACTTTAATA+TGG - chr1_4:56146552-56146571 Msa0171410:intron 20.0%
!!! AAGATCATTCATAATTTTGA+AGG - chr1_4:56139605-56139624 Msa0171410:intron 20.0%
!!! AGATCATTCATAATTTTGAA+GGG - chr1_4:56139606-56139625 Msa0171410:intron 20.0%
!! CAACATAAACTAAAATTATG+GGG - chr1_4:56140089-56140108 Msa0171410:intron 20.0%
!!! CTATTATTTTCATCATTATC+GGG - chr1_4:56140143-56140162 Msa0171410:intron 20.0%
!! CATTATTAGTGTTTAAATTG+CGG + chr1_4:56147314-56147333 None:intergenic 20.0%
!! CAGTTATTGAAGTTTAAATT+TGG + chr1_4:56147478-56147497 None:intergenic 20.0%
!! CAAATTTAAACTTCAATAAC+TGG - chr1_4:56147476-56147495 Msa0171410:intron 20.0%
!! GAAATAAGAATACATGAATT+GGG + chr1_4:56147715-56147734 None:intergenic 20.0%
!! AGAAATAAGAATACATGAAT+TGG + chr1_4:56147716-56147735 None:intergenic 20.0%
!! AAACAAAATGTAAACATAGT+AGG + chr1_4:56148230-56148249 None:intergenic 20.0%
!! CTTATTGTGGTTTAATATAT+TGG - chr1_4:56148320-56148339 Msa0171410:intron 20.0%
!!! AATATATTGGTTTGAACTAT+AGG - chr1_4:56148333-56148352 Msa0171410:intron 20.0%
!!! ATTCTTTAATTTTTCCATGA+TGG - chr1_4:56148375-56148394 Msa0171410:intron 20.0%
!!! TTCTTTAATTTTTCCATGAT+GGG - chr1_4:56148376-56148395 Msa0171410:intron 20.0%
!! CGAAATAGAATAAAACTATT+AGG - chr1_4:56148704-56148723 Msa0171410:intron 20.0%
!! AACGAAAACAAAATAGATAA+AGG + chr1_4:56149246-56149265 None:intergenic 20.0%
!!! TATCTATTTTGTTTTCGTTT+AGG - chr1_4:56149247-56149266 Msa0171410:intron 20.0%
!!! TGTGCTTTTATAAAAGATAA+AGG + chr1_4:56149274-56149293 None:intergenic 20.0%
!! CTTATTTATTTGTAACACTT+TGG + chr1_4:56149367-56149386 None:intergenic 20.0%
!!! AAAAAATTGTTTAAGGTGTA+GGG + chr1_4:56149428-56149447 None:intergenic 20.0%
!!! AAAAAAATTGTTTAAGGTGT+AGG + chr1_4:56149429-56149448 None:intergenic 20.0%
!!! CACCTTAAACAATTTTTTTT+TGG - chr1_4:56149430-56149449 Msa0171410:intron 20.0%
!! TGCCAAAAAAAAATTGTTTA+AGG + chr1_4:56149435-56149454 None:intergenic 20.0%
!! AAAAAACTCAATCATATTCT+AGG + chr1_4:56149604-56149623 None:intergenic 20.0%
!!! TTTTATTTTAATCCACAAAC+GGG + chr1_4:56149654-56149673 None:intergenic 20.0%
!! ATAGATTAAGAGAGAAAATA+TGG + chr1_4:56149823-56149842 None:intergenic 20.0%
!! AGAGAGAAAATATTGTTTAA+AGG + chr1_4:56150185-56150204 None:intergenic 20.0%
!!! TTTTAAAAAGCTGTAACAAA+CGG - chr1_4:56150276-56150295 Msa0171410:intron 20.0%
!! TCTAATACCCATTTAAAAAT+TGG - chr1_4:56150387-56150406 Msa0171410:intron 20.0%
!! TGAATTAGATTCTTACAATA+TGG + chr1_4:56150417-56150436 None:intergenic 20.0%
!! AAGAATCTAATTCATTTGTT+TGG - chr1_4:56150423-56150442 Msa0171410:intron 20.0%
!! TTCAACAAAAATTGAGTATA+GGG + chr1_4:56150562-56150581 None:intergenic 20.0%
!! ATTCAACAAAAATTGAGTAT+AGG + chr1_4:56150563-56150582 None:intergenic 20.0%
!!! ATACTTATATTTTATGACCT+GGG - chr1_4:56150909-56150928 Msa0171410:intron 20.0%
!! AAGGCAAAAAAACAAAATTA+AGG + chr1_4:56151048-56151067 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr1_4:56151176-56151195 None:intergenic 20.0%
!! AAAAGTTGACATATTTATAG+GGG + chr1_4:56151779-56151798 None:intergenic 20.0%
!! GAAAAGTTGACATATTTATA+GGG + chr1_4:56151780-56151799 None:intergenic 20.0%
!! TGAAAAGTTGACATATTTAT+AGG + chr1_4:56151781-56151800 None:intergenic 20.0%
!!! AGTTGAAGAATTTTTTTAGA+TGG + chr1_4:56151811-56151830 None:intergenic 20.0%
!!! TATGAATTTACTTTAAAGGA+GGG + chr1_4:56151870-56151889 None:intergenic 20.0%
!!! TTATGAATTTACTTTAAAGG+AGG + chr1_4:56151871-56151890 None:intergenic 20.0%
!! AGAGCTATTAAAATTAAGTA+AGG + chr1_4:56151961-56151980 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr1_4:56152023-56152042 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr1_4:56152024-56152043 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr1_4:56151176-56151195 None:intergenic 20.0%
!!! ATTTTTTAGATGGACTAAAA+TGG + chr1_4:56152743-56152762 None:intergenic 20.0%
!!! AGTTGAAGAAATTTTTTAGA+TGG + chr1_4:56152753-56152772 None:intergenic 20.0%
!!! TATGAATTTACTTTAAAGGA+GGG + chr1_4:56151870-56151889 None:intergenic 20.0%
!!! TTATGAATTTACTTTAAAGG+AGG + chr1_4:56151871-56151890 None:intergenic 20.0%
!! AGAGCTATTAAAATTAAGTA+AGG + chr1_4:56151961-56151980 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr1_4:56152023-56152042 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr1_4:56152024-56152043 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr1_4:56151176-56151195 None:intergenic 20.0%
!! AAAAGTTGACATATTTATAG+GGG + chr1_4:56151779-56151798 None:intergenic 20.0%
!! GAAAAGTTGACATATTTATA+GGG + chr1_4:56151780-56151799 None:intergenic 20.0%
!! TGAAAAGTTGACATATTTAT+AGG + chr1_4:56151781-56151800 None:intergenic 20.0%
!!! AGTTGAAGAATTTTTTTAGA+TGG + chr1_4:56151811-56151830 None:intergenic 20.0%
!!! TATGAATTTACTTTAAAGGA+GGG + chr1_4:56151870-56151889 None:intergenic 20.0%
!!! TTATGAATTTACTTTAAAGG+AGG + chr1_4:56151871-56151890 None:intergenic 20.0%
!! AGAGCTATTAAAATTAAGTA+AGG + chr1_4:56151961-56151980 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr1_4:56151176-56151195 None:intergenic 20.0%
!! AAAAGTTGACATATTTATAG+GGG + chr1_4:56151779-56151798 None:intergenic 20.0%
!! GAAAAGTTGACATATTTATA+GGG + chr1_4:56151780-56151799 None:intergenic 20.0%
!! TGAAAAGTTGACATATTTAT+AGG + chr1_4:56151781-56151800 None:intergenic 20.0%
!!! AGTTGAAGAAATTTTTTAGA+TGG + chr1_4:56152753-56152772 None:intergenic 20.0%
!!! TATGAATTTACTTTAAAGGA+GGG + chr1_4:56151870-56151889 None:intergenic 20.0%
!!! TTATGAATTTACTTTAAAGG+AGG + chr1_4:56151871-56151890 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr1_4:56152023-56152042 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr1_4:56152024-56152043 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr1_4:56151176-56151195 None:intergenic 20.0%
!! AAAAGTTGACATATTTATAG+GGG + chr1_4:56151779-56151798 None:intergenic 20.0%
!! GAAAAGTTGACATATTTATA+GGG + chr1_4:56151780-56151799 None:intergenic 20.0%
!! TGAAAAGTTGACATATTTAT+AGG + chr1_4:56151781-56151800 None:intergenic 20.0%
!!! AGTTGAAGAAATTTTTTAGA+TGG + chr1_4:56152753-56152772 None:intergenic 20.0%
!!! TATGAATTTACTTTAAAGGA+GGG + chr1_4:56151870-56151889 None:intergenic 20.0%
!!! TTATGAATTTACTTTAAAGG+AGG + chr1_4:56151871-56151890 None:intergenic 20.0%
!! AGAGCTATTAAAATTAAGTA+AGG + chr1_4:56151961-56151980 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr1_4:56152023-56152042 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr1_4:56152024-56152043 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr1_4:56151176-56151195 None:intergenic 20.0%
!! AAAAGTTGACATATTTATAG+GGG + chr1_4:56151779-56151798 None:intergenic 20.0%
!! GAAAAGTTGACATATTTATA+GGG + chr1_4:56151780-56151799 None:intergenic 20.0%
!! TGAAAAGTTGACATATTTAT+AGG + chr1_4:56151781-56151800 None:intergenic 20.0%
!!! AGTTGAAGAATTTTTTTAGA+TGG + chr1_4:56151811-56151830 None:intergenic 20.0%
!!! TATGAATTTACTTTAAAGGA+GGG + chr1_4:56151870-56151889 None:intergenic 20.0%
!!! TTATGAATTTACTTTAAAGG+AGG + chr1_4:56151871-56151890 None:intergenic 20.0%
!! AGAGCTATTAAAATTAAGTA+AGG + chr1_4:56151961-56151980 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr1_4:56152023-56152042 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr1_4:56152024-56152043 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr1_4:56151176-56151195 None:intergenic 20.0%
! AGTTATTGCTTCATTTACAT+AGG - chr1_4:56133474-56133493 Msa0171410:CDS 25.0%
!!! GAGCAGAGATTTTAAAAATT+TGG + chr1_4:56133559-56133578 None:intergenic 25.0%
! TAATAGACTATATCAAGATG+AGG + chr1_4:56134083-56134102 None:intergenic 25.0%
! TTTCAAAGAAAACATGGTAT+TGG + chr1_4:56134256-56134275 None:intergenic 25.0%
! GCATATATAACTTATTAACC+GGG - chr1_4:56134415-56134434 Msa0171410:intron 25.0%
! ATTCTAATATTTGCAACTGT+TGG - chr1_4:56134579-56134598 Msa0171410:intron 25.0%
!!! TTTTTTGGCTTCATATTTGT+GGG - chr1_4:56134635-56134654 Msa0171410:intron 25.0%
!!! AGACAATTTTAGTACTATCA+TGG + chr1_4:56134789-56134808 None:intergenic 25.0%
! TAGTACTAAAATTGTCTGTT+TGG - chr1_4:56134792-56134811 Msa0171410:intron 25.0%
! GTTACTTAATTGTCTTACTT+AGG + chr1_4:56135018-56135037 None:intergenic 25.0%
! GTGATTTAATATATTGGGAT+TGG - chr1_4:56135190-56135209 Msa0171410:intron 25.0%
! CAATATTGTTACTCATGAAT+AGG - chr1_4:56135392-56135411 Msa0171410:intron 25.0%
!! TCAAAACTTATATTTTGCAG+TGG + chr1_4:56135541-56135560 None:intergenic 25.0%
!!! CTGCAAAATATAAGTTTTGA+TGG - chr1_4:56135541-56135560 Msa0171410:intron 25.0%
!!! CGTTTTATTACTTTGAACTT+GGG + chr1_4:56135589-56135608 None:intergenic 25.0%
!!! TCGTTTTATTACTTTGAACT+TGG + chr1_4:56135590-56135609 None:intergenic 25.0%
! ATATGGAGGAAAAAAAAAAG+AGG + chr1_4:56135651-56135670 None:intergenic 25.0%
! TCAATCCATTAAAAATATGG+AGG + chr1_4:56135665-56135684 None:intergenic 25.0%
!! TAGATTTTGCCTTCTATAAT+TGG + chr1_4:56135840-56135859 None:intergenic 25.0%
!! AACTTGACATTTTACATGTA+AGG + chr1_4:56135987-56136006 None:intergenic 25.0%
! ACCTAATCTATCATCTATTA+CGG - chr1_4:56136011-56136030 Msa0171410:intron 25.0%
!! TCGAATGAACAAAAACTTTT+GGG + chr1_4:56136116-56136135 None:intergenic 25.0%
!! TTCGAATGAACAAAAACTTT+TGG + chr1_4:56136117-56136136 None:intergenic 25.0%
! GGACTTATACATAAATAATG+TGG - chr1_4:56136392-56136411 Msa0171410:intron 25.0%
! AGAGGATAATGATTAATCAA+TGG - chr1_4:56136425-56136444 Msa0171410:intron 25.0%
! TTAAATTTGCAAGAGTTAAC+AGG + chr1_4:56136668-56136687 None:intergenic 25.0%
! AGAAACTCATATGATGAAAA+AGG + chr1_4:56136780-56136799 None:intergenic 25.0%
! TTACAAAAATACTCTTGGTT+CGG - chr1_4:56136817-56136836 Msa0171410:intron 25.0%
!! AGGAATTTGAAATTTAACGT+AGG + chr1_4:56137093-56137112 None:intergenic 25.0%
!! ATTTGAAACTATATTACGGA+AGG + chr1_4:56137306-56137325 None:intergenic 25.0%
!!! TCATCGATTTCTCAAATATT+AGG - chr1_4:56137812-56137831 Msa0171410:intron 25.0%
!!! CATCGATTTCTCAAATATTA+GGG - chr1_4:56137813-56137832 Msa0171410:intron 25.0%
! CCTAATTATCTACATTTACA+AGG + chr1_4:56137892-56137911 None:intergenic 25.0%
! CCTTGTAAATGTAGATAATT+AGG - chr1_4:56137889-56137908 Msa0171410:intron 25.0%
! AGTGAATGAACACAATTAAA+AGG + chr1_4:56138793-56138812 None:intergenic 25.0%
!! ATGATGTAAAGAAAAAGTGT+AGG + chr1_4:56138927-56138946 None:intergenic 25.0%
! ACTATGCATGATAAAAAATC+GGG - chr1_4:56138958-56138977 Msa0171410:intron 25.0%
! CTTCAGTAGATAATAGAATT+TGG + chr1_4:56139204-56139223 None:intergenic 25.0%
! ATACAGAAACCACTTTAATA+TGG - chr1_4:56139423-56139442 Msa0171410:intron 25.0%
! GAAGTTAATAATTAGAATGG+TGG + chr1_4:56139498-56139517 None:intergenic 25.0%
! GGAGAAGTTAATAATTAGAA+TGG + chr1_4:56139501-56139520 None:intergenic 25.0%
!! TTCGATAATTTTATGTCCTT+CGG + chr1_4:56139677-56139696 None:intergenic 25.0%
! AAGGACATAAAATTATCGAA+GGG - chr1_4:56139677-56139696 Msa0171410:intron 25.0%
!! TTTGATGTGATTTTTGAACT+AGG - chr1_4:56139880-56139899 Msa0171410:intron 25.0%
! CATTAGTAGTGTTTAAATTG+CGG + chr1_4:56140185-56140204 None:intergenic 25.0%
!! TGTGTATGTTCTATTTTATG+TGG - chr1_4:56140203-56140222 Msa0171410:intron 25.0%
!! GTGTATGTTCTATTTTATGT+GGG - chr1_4:56140204-56140223 Msa0171410:intron 25.0%
!!! CATTTTTTAAATTCAAGTGG+GGG + chr1_4:56140345-56140364 None:intergenic 25.0%
!!! CCATTTTTTAAATTCAAGTG+GGG + chr1_4:56140346-56140365 None:intergenic 25.0%
! ATAAGGTTGCTAATAAACAA+AGG - chr1_4:56140393-56140412 Msa0171410:intron 25.0%
! TTAGAATACACCTTATGAAA+AGG + chr1_4:56140521-56140540 None:intergenic 25.0%
! ATCACAACAAATTAACACTT+CGG - chr1_4:56141087-56141106 Msa0171410:intron 25.0%
!!! AGTTTTATATCGTACTTGAA+TGG + chr1_4:56141328-56141347 None:intergenic 25.0%
! TTGTACCATTTAAGTACAAT+AGG - chr1_4:56141361-56141380 Msa0171410:intron 25.0%
! AGTAACCTATTGTACTTAAA+TGG + chr1_4:56141369-56141388 None:intergenic 25.0%
! ACAAAGTTGAGAAGATATTA+AGG + chr1_4:56141651-56141670 None:intergenic 25.0%
! GACAAAGTTGAAATAATTCT+TGG + chr1_4:56141719-56141738 None:intergenic 25.0%
! GAATTATTTCAACTTTGTCT+AGG - chr1_4:56141720-56141739 Msa0171410:intron 25.0%
! AAGTTAGATAATTCTTTGTG+AGG + chr1_4:56141945-56141964 None:intergenic 25.0%
! ACTAGAAGAACAAATCTATA+TGG + chr1_4:56142016-56142035 None:intergenic 25.0%
!! TAATTTTTACGTTGGGAAAA+CGG + chr1_4:56142317-56142336 None:intergenic 25.0%
!! CAGAGTAATTCAACTTTTAA+CGG - chr1_4:56142350-56142369 Msa0171410:intron 25.0%
!! CTTATGAGATTTTTATGATG+AGG + chr1_4:56142507-56142526 None:intergenic 25.0%
! AAATCCATAAGTAATACGTA+AGG - chr1_4:56142550-56142569 Msa0171410:intron 25.0%
! TATTCCTTACGTATTACTTA+TGG + chr1_4:56142557-56142576 None:intergenic 25.0%
! AAGATTAATGACACTAGTTA+AGG + chr1_4:56142821-56142840 None:intergenic 25.0%
! TTTGACATGAAAATATGTTG+TGG + chr1_4:56143835-56143854 None:intergenic 25.0%
! AGTTATGATGAAAATACTAC+GGG + chr1_4:56143998-56144017 None:intergenic 25.0%
! GAGTTATGATGAAAATACTA+CGG + chr1_4:56143999-56144018 None:intergenic 25.0%
!!! TAATTTTGTTAGCTTTCTAG+TGG + chr1_4:56144056-56144075 None:intergenic 25.0%
!!! AAATGAAAACTGGTATTGAT+CGG + chr1_4:56144118-56144137 None:intergenic 25.0%
!! TCCGAATTTAAAATGAAAAC+TGG + chr1_4:56144128-56144147 None:intergenic 25.0%
! GATTTATAGAACTTGAGTTA+TGG + chr1_4:56144206-56144225 None:intergenic 25.0%
!!! CCGAATTTTGATATTAAAAC+TGG + chr1_4:56144321-56144340 None:intergenic 25.0%
! ATAATCCATAGGATGATTAT+TGG + chr1_4:56144405-56144424 None:intergenic 25.0%
! TATGAACTTGGTTTATACAT+TGG + chr1_4:56144704-56144723 None:intergenic 25.0%
!!! TCATAACTATTTCTGATTAC+TGG - chr1_4:56144785-56144804 Msa0171410:intron 25.0%
! TAAAAATTAAGAACTAGTGG+GGG + chr1_4:56144830-56144849 None:intergenic 25.0%
!!! CTAGTCTTATTTTTGAACTT+GGG + chr1_4:56145095-56145114 None:intergenic 25.0%
!!! ACTAGTCTTATTTTTGAACT+TGG + chr1_4:56145096-56145115 None:intergenic 25.0%
! AGTTCAAAAATAAGACTAGT+TGG - chr1_4:56145096-56145115 Msa0171410:intron 25.0%
!! GTTCAAAAATAAGACTAGTT+GGG - chr1_4:56145097-56145116 Msa0171410:intron 25.0%
! CACACAACTAATAAAATAGA+AGG - chr1_4:56145496-56145515 Msa0171410:intron 25.0%
! TATCTTCATTGCACAATTAT+AGG - chr1_4:56145681-56145700 Msa0171410:intron 25.0%
! CACTAACATTATAGGAATAA+TGG + chr1_4:56145752-56145771 None:intergenic 25.0%
! ATCATGCATCATAAGAAATT+TGG - chr1_4:56145977-56145996 Msa0171410:intron 25.0%
! TCATGCATCATAAGAAATTT+GGG - chr1_4:56145978-56145997 Msa0171410:intron 25.0%
! TCCATACTTTACGATTAAAA+AGG - chr1_4:56146106-56146125 Msa0171410:intron 25.0%
!! TCCTTTTTAATCGTAAAGTA+TGG + chr1_4:56146110-56146129 None:intergenic 25.0%
! GATTTATCCATAATGCATTT+AGG - chr1_4:56146207-56146226 Msa0171410:intron 25.0%
!!! CGTCTTAAAATTGTTGTTTT+TGG - chr1_4:56146281-56146300 Msa0171410:intron 25.0%
! CTTCAGTAGATAATAGAATT+TGG + chr1_4:56139204-56139223 None:intergenic 25.0%
! GAAGTTAATAATTAGAATGG+TGG + chr1_4:56139498-56139517 None:intergenic 25.0%
! GGAGAAGTTAATAATTAGAA+TGG + chr1_4:56139501-56139520 None:intergenic 25.0%
! AGTGATTATAGTATCATAGT+TGG + chr1_4:56146651-56146670 None:intergenic 25.0%
!! TTCGATAATTTTATGTCCTT+CGG + chr1_4:56139677-56139696 None:intergenic 25.0%
! AAGGACATAAAATTATCGAA+GGG - chr1_4:56139677-56139696 Msa0171410:intron 25.0%
! TTTAAATTTGGGTGTATTGT+TGG + chr1_4:56147466-56147485 None:intergenic 25.0%
! TTAAACTTCAATAACTGGAA+TGG - chr1_4:56147481-56147500 Msa0171410:intron 25.0%
! AATACATGAATTGGGAAAAT+AGG + chr1_4:56147707-56147726 None:intergenic 25.0%
!! TCAACTTTTATTACTTGTCA+TGG - chr1_4:56148265-56148284 Msa0171410:intron 25.0%
!! TTTAAAGTTCACAAACAGTT+TGG - chr1_4:56148573-56148592 Msa0171410:intron 25.0%
!!! GAGTTTTGTAAACATTAAAG+AGG + chr1_4:56148840-56148859 None:intergenic 25.0%
! ACTCATTTATTTAACGAGTT+TGG - chr1_4:56149071-56149090 Msa0171410:intron 25.0%
!! AAAAATTGTTTAAGGTGTAG+GGG + chr1_4:56149427-56149446 None:intergenic 25.0%
!! TACAACTATTCTCTAGAAAA+AGG - chr1_4:56149497-56149516 Msa0171410:intron 25.0%
!! ACAACTATTCTCTAGAAAAA+GGG - chr1_4:56149498-56149517 Msa0171410:intron 25.0%
! ATCTCATAAATGAGTATGTT+GGG + chr1_4:56149554-56149573 None:intergenic 25.0%
! AATCTCATAAATGAGTATGT+TGG + chr1_4:56149555-56149574 None:intergenic 25.0%
!!! CATATTCTAGGCATTTTTTT+TGG + chr1_4:56149592-56149611 None:intergenic 25.0%
!! TGGTGAACCAATTTTTAAAT+GGG + chr1_4:56150397-56150416 None:intergenic 25.0%
!! ATGGTGAACCAATTTTTAAA+TGG + chr1_4:56150398-56150417 None:intergenic 25.0%
! TCAACAAAAATTGAGTATAG+GGG + chr1_4:56150561-56150580 None:intergenic 25.0%
!! TCATGTAACTTCTTTGATTT+CGG + chr1_4:56150610-56150629 None:intergenic 25.0%
! AAAGAAGTTACATGAAAGTT+TGG - chr1_4:56150615-56150634 Msa0171410:intron 25.0%
! CGGAGTTTATAAAGATAATT+TGG + chr1_4:56150806-56150825 None:intergenic 25.0%
! AAATATAAGTATGATATGCG+TGG + chr1_4:56150901-56150920 None:intergenic 25.0%
!! CATACTTATATTTTATGACC+TGG - chr1_4:56150908-56150927 Msa0171410:intron 25.0%
!!! TACAAGGTCGTTATTTTATA+GGG + chr1_4:56150988-56151007 None:intergenic 25.0%
!!! TTACAAGGTCGTTATTTTAT+AGG + chr1_4:56150989-56151008 None:intergenic 25.0%
! AAACAAATTTGAATTGAGCA+GGG + chr1_4:56151081-56151100 None:intergenic 25.0%
! TAAACAAATTTGAATTGAGC+AGG + chr1_4:56151082-56151101 None:intergenic 25.0%
! CAAAATTAGAACACTATGAA+AGG + chr1_4:56151308-56151327 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - chr1_4:56151370-56151389 Msa0171410:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - chr1_4:56151371-56151390 Msa0171410:intron 25.0%
!! TTTCTAGTCCCTATAAAATA+GGG - chr1_4:56150977-56150996 Msa0171410:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr1_4:56151990-56152009 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGG+AGG - chr1_4:56152312-56152331 Msa0171410:intron 25.0%
!!! AATCAAACTTTGTTTTAGGA+GGG - chr1_4:56152313-56152332 Msa0171410:intron 25.0%
! GAAAGTTGACATATTTATAG+GGG + chr1_4:56152721-56152740 None:intergenic 25.0%
! GGAAAGTTGACATATTTATA+GGG + chr1_4:56152722-56152741 None:intergenic 25.0%
! TGGAAAGTTGACATATTTAT+AGG + chr1_4:56152723-56152742 None:intergenic 25.0%
!! TTTCTAGTCCCTATAAAATA+GGG - chr1_4:56150977-56150996 Msa0171410:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr1_4:56151990-56152009 None:intergenic 25.0%
! CAAAATTAGAACACTATGAA+AGG + chr1_4:56151308-56151327 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - chr1_4:56151370-56151389 Msa0171410:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - chr1_4:56151371-56151390 Msa0171410:intron 25.0%
!! TTTCTAGTCCCTATAAAATA+GGG - chr1_4:56150977-56150996 Msa0171410:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr1_4:56151990-56152009 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGG+AGG - chr1_4:56152312-56152331 Msa0171410:intron 25.0%
!!! AATCAAACTTTGTTTTAGGA+GGG - chr1_4:56152313-56152332 Msa0171410:intron 25.0%
!! TTTCTAGTCCCTATAAAATA+GGG - chr1_4:56150977-56150996 Msa0171410:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr1_4:56151990-56152009 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGG+AGG - chr1_4:56152312-56152331 Msa0171410:intron 25.0%
!!! AATCAAACTTTGTTTTAGGA+GGG - chr1_4:56152313-56152332 Msa0171410:intron 25.0%
!! TTTCTAGTCCCTATAAAATA+GGG - chr1_4:56150977-56150996 Msa0171410:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr1_4:56151990-56152009 None:intergenic 25.0%
! CAAAATTAGAACACTATGAA+AGG + chr1_4:56151308-56151327 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - chr1_4:56151370-56151389 Msa0171410:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - chr1_4:56151371-56151390 Msa0171410:intron 25.0%
!! TTTCTAGTCCCTATAAAATA+GGG - chr1_4:56150977-56150996 Msa0171410:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr1_4:56151990-56152009 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGG+AGG - chr1_4:56152312-56152331 Msa0171410:intron 25.0%
!!! AATCAAACTTTGTTTTAGGA+GGG - chr1_4:56152313-56152332 Msa0171410:intron 25.0%
! TAAGTTATAAACGCTGTTAT+AGG + chr1_4:56157359-56157378 None:intergenic 25.0%
! AGCGTTTATAACTTATTAAC+TGG - chr1_4:56157364-56157383 Msa0171410:intron 25.0%
! GCGTTTATAACTTATTAACT+GGG - chr1_4:56157365-56157384 Msa0171410:intron 25.0%
! TTATAACTTATTAACTGGGT+AGG - chr1_4:56157369-56157388 Msa0171410:intron 25.0%
! AAGCTACATATTGAGTATTT+GGG + chr1_4:56157611-56157630 None:intergenic 25.0%
! TAAGCTACATATTGAGTATT+TGG + chr1_4:56157612-56157631 None:intergenic 25.0%
! TAGTACTAAAATTGTCTGTT+TGG - chr1_4:56134792-56134811 Msa0171410:intron 25.0%
CAACTTGAATGTAATAAGCA+TGG + chr1_4:56133845-56133864 None:intergenic 30.0%
! CAAGTTGAACACTATTATAC+TGG - chr1_4:56133989-56134008 Msa0171410:intron 30.0%
ATATAACTTATTAACCGGGT+AGG - chr1_4:56134419-56134438 Msa0171410:intron 30.0%
AATATTTGCAACTGTTGGAT+AGG - chr1_4:56134584-56134603 Msa0171410:intron 30.0%
!!! GTTTTTTGGCTTCATATTTG+TGG - chr1_4:56134634-56134653 Msa0171410:intron 30.0%
TTTGAACTTCTTCATCTTCT+AGG + chr1_4:56134927-56134946 None:intergenic 30.0%
GATGATTATAATTCGAAGTG+TGG - chr1_4:56134964-56134983 Msa0171410:intron 30.0%
TAAGTAACATACTATTCTGG+TGG - chr1_4:56135030-56135049 Msa0171410:intron 30.0%
!! ACAACTTTTGTTACTTGTCA+TGG - chr1_4:56135129-56135148 Msa0171410:intron 30.0%
CTTGTCATGGTTCAATATAT+TGG - chr1_4:56135142-56135161 Msa0171410:intron 30.0%
! TTTGCTGCCATTTATTGATT+TGG - chr1_4:56135285-56135304 Msa0171410:intron 30.0%
CAGACCAAAATTTAAATCAC+TGG + chr1_4:56135347-56135366 None:intergenic 30.0%
TCAATATTGTTACACAACCA+TGG + chr1_4:56135478-56135497 None:intergenic 30.0%
TTAAATGGAAGCAATGTCTT+AGG - chr1_4:56135499-56135518 Msa0171410:intron 30.0%
TACAAAATCATGATGTGAGT+TGG - chr1_4:56135783-56135802 Msa0171410:intron 30.0%
ACAGTGATACCAATTATAGA+AGG - chr1_4:56135828-56135847 Msa0171410:intron 30.0%
! AGGGTCAAAATTGATTCTAT+AGG + chr1_4:56135932-56135951 None:intergenic 30.0%
CCTAATCTATCATCTATTAC+GGG - chr1_4:56136012-56136031 Msa0171410:intron 30.0%
TAATCATTATCCTCTTCACA+TGG + chr1_4:56136420-56136439 None:intergenic 30.0%
!!! TGCTTATATTTTGAAACGGA+GGG + chr1_4:56136495-56136514 None:intergenic 30.0%
!!! TTGCTTATATTTTGAAACGG+AGG + chr1_4:56136496-56136515 None:intergenic 30.0%
TTGATTCCACTAAAAAGTAG+TGG + chr1_4:56136541-56136560 None:intergenic 30.0%
! TGTGAATGAGCAAAAACTTT+TGG - chr1_4:56136734-56136753 Msa0171410:intron 30.0%
! GTGAATGAGCAAAAACTTTT+GGG - chr1_4:56136735-56136754 Msa0171410:intron 30.0%
! GTTATAGGGTTTGCATATTT+TGG + chr1_4:56136887-56136906 None:intergenic 30.0%
! ACGAATACTGATGATGTTTA+TGG - chr1_4:56137212-56137231 Msa0171410:intron 30.0%
AATGTAATGACTAATGAGCA+TGG + chr1_4:56137250-56137269 None:intergenic 30.0%
GGAAGGAATGTAAGAAAATA+GGG + chr1_4:56137289-56137308 None:intergenic 30.0%
CTCATATGAATAAATGCAGA+AGG - chr1_4:56137359-56137378 Msa0171410:intron 30.0%
! TGTCATTCTTTTGTTCTTTC+TGG + chr1_4:56137518-56137537 None:intergenic 30.0%
TATGTAGCTGTAGAGAATAT+TGG + chr1_4:56138091-56138110 None:intergenic 30.0%
TGCTTAATGCTAATAAGCTT+TGG - chr1_4:56138156-56138175 Msa0171410:intron 30.0%
TTTCAATTGGATAGAAAGAG+TGG - chr1_4:56138198-56138217 Msa0171410:intron 30.0%
CTATCAAATTCTATTATGGG+CGG - chr1_4:56138406-56138425 Msa0171410:intron 30.0%
ATTTCTTGAGAAAATCTGTC+GGG + chr1_4:56138569-56138588 None:intergenic 30.0%
CATTTCTTGAGAAAATCTGT+CGG + chr1_4:56138570-56138589 None:intergenic 30.0%
! CTTTTATTGTCCACAAATCA+CGG - chr1_4:56138620-56138639 Msa0171410:intron 30.0%
! TTTTATTGTCCACAAATCAC+GGG - chr1_4:56138621-56138640 Msa0171410:intron 30.0%
!! ATTGATGATGATATATTGGC+TGG + chr1_4:56138832-56138851 None:intergenic 30.0%
TGTTCACTTGGAAGAAAAAA+CGG + chr1_4:56139107-56139126 None:intergenic 30.0%
TATCTACTGAAGTTGTTACT+AGG - chr1_4:56139212-56139231 Msa0171410:intron 30.0%
GATCTTAGTTCCATATTTGA+GGG + chr1_4:56139395-56139414 None:intergenic 30.0%
TGATCTTAGTTCCATATTTG+AGG + chr1_4:56139396-56139415 None:intergenic 30.0%
GTAATGGTACCATATTAAAG+TGG + chr1_4:56139435-56139454 None:intergenic 30.0%
AAGGGACATTATACCAAAAA+AGG - chr1_4:56139624-56139643 Msa0171410:intron 30.0%
AGGGACATTATACCAAAAAA+GGG - chr1_4:56139625-56139644 Msa0171410:intron 30.0%
!!! TAAGATCATAGTCCCTTTTT+TGG + chr1_4:56139640-56139659 None:intergenic 30.0%
GAAGGACATAAAATTATCGA+AGG - chr1_4:56139676-56139695 Msa0171410:intron 30.0%
! TTTTCGGTTTAATGTCCTTT+CGG + chr1_4:56139730-56139749 None:intergenic 30.0%
AAAGGACATTAAACCGAAAA+GGG - chr1_4:56139730-56139749 Msa0171410:intron 30.0%
! AAAGAGTTTCATTGAGTTGT+CGG + chr1_4:56139863-56139882 None:intergenic 30.0%
TTACAAACTCTCCCTATAAA+AGG + chr1_4:56139914-56139933 None:intergenic 30.0%
AGCTCAAGTAACAAACTAAT+CGG - chr1_4:56139990-56140009 Msa0171410:intron 30.0%
CCCCACTTGAATTTAAAAAA+TGG - chr1_4:56140343-56140362 Msa0171410:intron 30.0%
AACGTCAAAACGTTTCTATA+AGG - chr1_4:56140376-56140395 Msa0171410:intron 30.0%
TGTAAGCAACTCTTGTAAAT+CGG + chr1_4:56140459-56140478 None:intergenic 30.0%
TTATGAAAAGGTTTGTGTGT+GGG + chr1_4:56140509-56140528 None:intergenic 30.0%
TTAGTTAATCCTTTGACGAA+AGG + chr1_4:56140926-56140945 None:intergenic 30.0%
! ATAATCGTCTTTTACCATTG+TGG - chr1_4:56141031-56141050 Msa0171410:intron 30.0%
ATTGAGAATTGTTACCACAA+TGG + chr1_4:56141048-56141067 None:intergenic 30.0%
! GTCGGTTCTAATATATTCAA+TGG - chr1_4:56141508-56141527 Msa0171410:intron 30.0%
ACATAATATGCTAGCATCAT+TGG + chr1_4:56141549-56141568 None:intergenic 30.0%
ACTTTGTGAGTTTCATCAAA+AGG - chr1_4:56141664-56141683 Msa0171410:intron 30.0%
TTATACTCATTCGATAGCAT+TGG - chr1_4:56141876-56141895 Msa0171410:intron 30.0%
CTGAAAATTATTGCGATTCA+TGG + chr1_4:56141987-56142006 None:intergenic 30.0%
! CATGAATCGCAATAATTTTC+AGG - chr1_4:56141985-56142004 Msa0171410:intron 30.0%
!! CTTCTAGTTCACCATAAAAA+AGG - chr1_4:56142028-56142047 Msa0171410:intron 30.0%
!!! TGTGAAAGTTGCCTTTTTTA+TGG + chr1_4:56142042-56142061 None:intergenic 30.0%
TAACTCAATAGTACTCCAAA+TGG + chr1_4:56142066-56142085 None:intergenic 30.0%
GAGTACTATTGAGTTATGAA+CGG - chr1_4:56142070-56142089 Msa0171410:intron 30.0%
!! TTCTAAAACCTTTGACTACA+AGG - chr1_4:56142175-56142194 Msa0171410:intron 30.0%
AAAACTAAAACCTGATGGTA+CGG + chr1_4:56142220-56142239 None:intergenic 30.0%
! AATTTTTACGTTGGGAAAAC+GGG + chr1_4:56142316-56142335 None:intergenic 30.0%
! TTTTATGACCTTAGAGAAGA+GGG + chr1_4:56143343-56143362 None:intergenic 30.0%
GTTATGATGAAAATACTACG+GGG + chr1_4:56143997-56144016 None:intergenic 30.0%
TTTGACGTGAAAATGATGTT+TGG + chr1_4:56144027-56144046 None:intergenic 30.0%
! TAGGTCACAGTGAATTTTTA+TGG + chr1_4:56144168-56144187 None:intergenic 30.0%
!! TGTTAGCTTTCTAATGTCAT+TGG + chr1_4:56144243-56144262 None:intergenic 30.0%
!! GATTATTGGAAGTAGTTTTG+AGG + chr1_4:56144391-56144410 None:intergenic 30.0%
TACTTCCAATAATCATCCTA+TGG - chr1_4:56144397-56144416 Msa0171410:intron 30.0%
! AATCATCCTATGGATTATCT+AGG - chr1_4:56144407-56144426 Msa0171410:intron 30.0%
! ATCATCCTATGGATTATCTA+GGG - chr1_4:56144408-56144427 Msa0171410:intron 30.0%
TAAAGAAGCTATATCCTCAT+TGG + chr1_4:56144662-56144681 None:intergenic 30.0%
ATGAGGATATAGCTTCTTTA+AGG - chr1_4:56144662-56144681 Msa0171410:intron 30.0%
! ATTGCTAAAGAGTATGAACT+TGG + chr1_4:56144716-56144735 None:intergenic 30.0%
CCTGTAAATAAAGAATAGTG+GGG + chr1_4:56144899-56144918 None:intergenic 30.0%
CCCTGTAAATAAAGAATAGT+GGG + chr1_4:56144900-56144919 None:intergenic 30.0%
! CCCACTATTCTTTATTTACA+GGG - chr1_4:56144897-56144916 Msa0171410:intron 30.0%
! CCACTATTCTTTATTTACAG+GGG - chr1_4:56144898-56144917 Msa0171410:intron 30.0%
CTATGATCACTTTAGCATTT+AGG - chr1_4:56144954-56144973 Msa0171410:intron 30.0%
TTATAATCAGTGACGCATAT+AGG + chr1_4:56144988-56145007 None:intergenic 30.0%
CCTATGAATGTGTATTCATT+GGG + chr1_4:56145015-56145034 None:intergenic 30.0%
! ACTAGTGAGTTTAACTTTCT+TGG - chr1_4:56145039-56145058 Msa0171410:intron 30.0%
! CTAGTGAGTTTAACTTTCTT+GGG - chr1_4:56145040-56145059 Msa0171410:intron 30.0%
! TAGTGAGTTTAACTTTCTTG+GGG - chr1_4:56145041-56145060 Msa0171410:intron 30.0%
CTTGTTCACATGATAATTGT+TGG - chr1_4:56145454-56145473 Msa0171410:intron 30.0%
TCATTGCACAATTATAGGTT+TGG - chr1_4:56145686-56145705 Msa0171410:intron 30.0%
CATTGCACAATTATAGGTTT+GGG - chr1_4:56145687-56145706 Msa0171410:intron 30.0%
ATTGCACAATTATAGGTTTG+GGG - chr1_4:56145688-56145707 Msa0171410:intron 30.0%
!! CTGTTTTATGATTTGTCATG+TGG + chr1_4:56145862-56145881 None:intergenic 30.0%
TGAAATAAGCTAATTGCATC+TGG + chr1_4:56145905-56145924 None:intergenic 30.0%
GTAAAGTATGGAGTTAATTG+TGG + chr1_4:56146035-56146054 None:intergenic 30.0%
! AACTCCATACTTTACGATTT+TGG - chr1_4:56146040-56146059 Msa0171410:intron 30.0%
! ACTCCATACTTTACGATTTT+GGG - chr1_4:56146041-56146060 Msa0171410:intron 30.0%
ATTCCCAAAATCGTAAAGTA+TGG + chr1_4:56146047-56146066 None:intergenic 30.0%
GTAAAGTATGGAGTTAATTG+TGG + chr1_4:56146035-56146054 None:intergenic 30.0%
! TGAAACAATGAAGTGTTTGT+TGG + chr1_4:56146162-56146181 None:intergenic 30.0%
AATTGTCCCTAAATGCATTA+TGG + chr1_4:56146217-56146236 None:intergenic 30.0%
TATCTACTGAAGTTGTTACT+AGG - chr1_4:56139212-56139231 Msa0171410:intron 30.0%
GAGAATTACACTCTCAAATA+TGG - chr1_4:56146511-56146530 Msa0171410:intron 30.0%
GTAACAGTACCATATTAAAG+TGG + chr1_4:56146564-56146583 None:intergenic 30.0%
AAGGGACATTATACCAAAAA+AGG - chr1_4:56139624-56139643 Msa0171410:intron 30.0%
AGGGACATTATACCAAAAAA+GGG - chr1_4:56139625-56139644 Msa0171410:intron 30.0%
!!! TAAGATCATAGTCCCTTTTT+TGG + chr1_4:56139640-56139659 None:intergenic 30.0%
GAAGGACATAAAATTATCGA+AGG - chr1_4:56139676-56139695 Msa0171410:intron 30.0%
! AAAGAGTTTCATTGAGTTGT+CGG + chr1_4:56139863-56139882 None:intergenic 30.0%
!! TTTGGTGTGATTTTTGAACT+AGG - chr1_4:56147009-56147028 Msa0171410:intron 30.0%
TTACAAACTCTCCCTATAAA+AGG + chr1_4:56139914-56139933 None:intergenic 30.0%
AGCTCAAGTAACAAACTAAT+CGG - chr1_4:56139990-56140009 Msa0171410:intron 30.0%
GGAAAAATAGGAAATTCAGT+TGG - chr1_4:56147175-56147194 Msa0171410:intron 30.0%
! TGTGTGTGTTCTATTTTATG+TGG - chr1_4:56147332-56147351 Msa0171410:intron 30.0%
! GTGTGTGTTCTATTTTATGT+GGG - chr1_4:56147333-56147352 Msa0171410:intron 30.0%
AGATTCATAACGACACAAAT+GGG + chr1_4:56147678-56147697 None:intergenic 30.0%
! ATTTCTGTAACTTTTTGTGC+TGG - chr1_4:56147730-56147749 Msa0171410:intron 30.0%
AGGATAGTTATGAAATCCAT+GGG + chr1_4:56147882-56147901 None:intergenic 30.0%
!! AGACAATTTTAGTACTCCTA+CGG + chr1_4:56147934-56147953 None:intergenic 30.0%
GAGTACTAAAATTGTCTGTT+TGG - chr1_4:56147937-56147956 Msa0171410:intron 30.0%
TTGTTGAAGGAATAGAAGTT+AGG - chr1_4:56148128-56148147 Msa0171410:intron 30.0%
! CTTCACAATATGTTGCTTAA+TGG + chr1_4:56148165-56148184 None:intergenic 30.0%
CATTAAGCAACATATTGTGA+AGG - chr1_4:56148163-56148182 Msa0171410:intron 30.0%
TTGTCATGGTTCAATATAGT+GGG - chr1_4:56148279-56148298 Msa0171410:intron 30.0%
!! ATATTGGTTTGAACTATAGG+TGG - chr1_4:56148336-56148355 Msa0171410:intron 30.0%
TGAACTATAGGTGGTATTTA+CGG - chr1_4:56148345-56148364 Msa0171410:intron 30.0%
ACAAAATTATATTAGGGGCT+AGG - chr1_4:56148432-56148451 Msa0171410:intron 30.0%
CAAAATTATATTAGGGGCTA+GGG - chr1_4:56148433-56148452 Msa0171410:intron 30.0%
!!! CCTTTTTTTTAACTCGAGTT+CGG - chr1_4:56148546-56148565 Msa0171410:intron 30.0%
!! GATAATTGATTCGTTGAACT+TGG + chr1_4:56149132-56149151 None:intergenic 30.0%
AGATAAAAGACCCCTAATTA+GGG + chr1_4:56149201-56149220 None:intergenic 30.0%
AAGATAAAAGACCCCTAATT+AGG + chr1_4:56149202-56149221 None:intergenic 30.0%
TAATCGAGATAAACATATGC+TGG + chr1_4:56149479-56149498 None:intergenic 30.0%
! GTGTTGTTATAGCTTCTTTA+AGG + chr1_4:56149963-56149982 None:intergenic 30.0%
TAAAGAAGCTATAACAACAC+AGG - chr1_4:56149963-56149982 Msa0171410:intron 30.0%
! TTCAAGTTTAAACTCAGAAC+CGG - chr1_4:56150512-56150531 Msa0171410:intron 30.0%
CAACAAAAATTGAGTATAGG+GGG + chr1_4:56150560-56150579 None:intergenic 30.0%
GCATGATAGATGATAGATTA+GGG + chr1_4:56150687-56150706 None:intergenic 30.0%
AGCATGATAGATGATAGATT+AGG + chr1_4:56150688-56150707 None:intergenic 30.0%
ATCTTTATAAACTCCGAGTA+CGG - chr1_4:56150810-56150829 Msa0171410:intron 30.0%
GAAATAATGATATCCGTACT+CGG + chr1_4:56150826-56150845 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr1_4:56151448-56151467 None:intergenic 30.0%
ATAGACTAATCAATCGAACT+AGG - chr1_4:56151569-56151588 Msa0171410:intron 30.0%
! AATCAGAAGTTATGGGTTAT+TGG + chr1_4:56151666-56151685 None:intergenic 30.0%
! AAGTGAAGACGGAAAATTTT+GGG + chr1_4:56151842-56151861 None:intergenic 30.0%
! AAAGTGAAGACGGAAAATTT+TGG + chr1_4:56151843-56151862 None:intergenic 30.0%
! AAATTTTCCGTCTTCACTTT+TGG - chr1_4:56151843-56151862 Msa0171410:intron 30.0%
!! GTTTCTAGTCCCTATAAAAT+AGG - chr1_4:56150976-56150995 Msa0171410:intron 30.0%
! TAAGAGGTCCCTATTTTATA+GGG + chr1_4:56151930-56151949 None:intergenic 30.0%
! TTAAGAGGTCCCTATTTTAT+AGG + chr1_4:56151931-56151950 None:intergenic 30.0%
AAGTAAGGACTAAACTTAAG+AGG + chr1_4:56151946-56151965 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr1_4:56151991-56152010 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + chr1_4:56152250-56152269 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr1_4:56151448-56151467 Msa0171410:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr1_4:56151463-56151482 Msa0171410:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr1_4:56151464-56151483 Msa0171410:intron 30.0%
ATAGACTAATCAATCGAACT+AGG - chr1_4:56151569-56151588 Msa0171410:intron 30.0%
! ATCAGAAGTTATGGGTTATT+GGG + chr1_4:56151665-56151684 None:intergenic 30.0%
! AATCAGAAGTTATGGGTTAT+TGG + chr1_4:56151666-56151685 None:intergenic 30.0%
! AAGTGAAGACGGAAAATTTT+GGG + chr1_4:56151842-56151861 None:intergenic 30.0%
! AAAGTGAAGACGGAAAATTT+TGG + chr1_4:56151843-56151862 None:intergenic 30.0%
! AAATTTTCCGTCTTCACTTT+TGG - chr1_4:56151843-56151862 Msa0171410:intron 30.0%
!! GTTTCTAGTCCCTATAAAAT+AGG - chr1_4:56150976-56150995 Msa0171410:intron 30.0%
! TAAGAGGTCCCTATTTTATA+GGG + chr1_4:56151930-56151949 None:intergenic 30.0%
! TTAAGAGGTCCCTATTTTAT+AGG + chr1_4:56151931-56151950 None:intergenic 30.0%
AAGTAAGGACTAAACTTAAG+AGG + chr1_4:56151946-56151965 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr1_4:56151991-56152010 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr1_4:56151448-56151467 Msa0171410:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr1_4:56151463-56151482 Msa0171410:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr1_4:56151464-56151483 Msa0171410:intron 30.0%
ATAGACTAATCAATCGAACT+AGG - chr1_4:56151569-56151588 Msa0171410:intron 30.0%
! ATCAGAAGTTATGGGTTATT+GGG + chr1_4:56151665-56151684 None:intergenic 30.0%
! AATCAGAAGTTATGGGTTAT+TGG + chr1_4:56151666-56151685 None:intergenic 30.0%
! AAGTGAAGACGGAAAATTTT+GGG + chr1_4:56151842-56151861 None:intergenic 30.0%
! AAAGTGAAGACGGAAAATTT+TGG + chr1_4:56151843-56151862 None:intergenic 30.0%
! AAATTTTCCGTCTTCACTTT+TGG - chr1_4:56151843-56151862 Msa0171410:intron 30.0%
!! GTTTCTAGTCCCTATAAAAT+AGG - chr1_4:56150976-56150995 Msa0171410:intron 30.0%
! TAAGAGGTCCCTATTTTATA+GGG + chr1_4:56151930-56151949 None:intergenic 30.0%
! TTAAGAGGTCCCTATTTTAT+AGG + chr1_4:56151931-56151950 None:intergenic 30.0%
AAGTAAGGACTAAACTTAAG+AGG + chr1_4:56151946-56151965 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr1_4:56151991-56152010 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + chr1_4:56152250-56152269 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr1_4:56151448-56151467 Msa0171410:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr1_4:56151463-56151482 Msa0171410:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr1_4:56151464-56151483 Msa0171410:intron 30.0%
ATAGACTAATCAATCGAACT+AGG - chr1_4:56151569-56151588 Msa0171410:intron 30.0%
! ATCAGAAGTTATGGGTTATT+GGG + chr1_4:56151665-56151684 None:intergenic 30.0%
! AATCAGAAGTTATGGGTTAT+TGG + chr1_4:56151666-56151685 None:intergenic 30.0%
! AAGTGAAGACGGAAAATTTT+GGG + chr1_4:56151842-56151861 None:intergenic 30.0%
! AAAGTGAAGACGGAAAATTT+TGG + chr1_4:56151843-56151862 None:intergenic 30.0%
! AAATTTTCCGTCTTCACTTT+TGG - chr1_4:56151843-56151862 Msa0171410:intron 30.0%
!! GTTTCTAGTCCCTATAAAAT+AGG - chr1_4:56150976-56150995 Msa0171410:intron 30.0%
! TAAGAGGTCCCTATTTTATA+GGG + chr1_4:56151930-56151949 None:intergenic 30.0%
! TTAAGAGGTCCCTATTTTAT+AGG + chr1_4:56151931-56151950 None:intergenic 30.0%
AAGTAAGGACTAAACTTAAG+AGG + chr1_4:56151946-56151965 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr1_4:56151991-56152010 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + chr1_4:56152250-56152269 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr1_4:56151448-56151467 Msa0171410:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr1_4:56151463-56151482 Msa0171410:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr1_4:56151464-56151483 Msa0171410:intron 30.0%
ATAGACTAATCAATCGAACT+AGG - chr1_4:56151569-56151588 Msa0171410:intron 30.0%
! ATCAGAAGTTATGGGTTATT+GGG + chr1_4:56151665-56151684 None:intergenic 30.0%
! AATCAGAAGTTATGGGTTAT+TGG + chr1_4:56151666-56151685 None:intergenic 30.0%
! AAGTGAAGACGGAAAATTTT+GGG + chr1_4:56151842-56151861 None:intergenic 30.0%
! AAAGTGAAGACGGAAAATTT+TGG + chr1_4:56151843-56151862 None:intergenic 30.0%
! AAATTTTCCGTCTTCACTTT+TGG - chr1_4:56151843-56151862 Msa0171410:intron 30.0%
!! GTTTCTAGTCCCTATAAAAT+AGG - chr1_4:56150976-56150995 Msa0171410:intron 30.0%
! TAAGAGGTCCCTATTTTATA+GGG + chr1_4:56151930-56151949 None:intergenic 30.0%
! TTAAGAGGTCCCTATTTTAT+AGG + chr1_4:56151931-56151950 None:intergenic 30.0%
AAGTAAGGACTAAACTTAAG+AGG + chr1_4:56151946-56151965 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr1_4:56151991-56152010 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr1_4:56151448-56151467 Msa0171410:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr1_4:56151463-56151482 Msa0171410:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr1_4:56151464-56151483 Msa0171410:intron 30.0%
ATAGACTAATCAATCGAACT+AGG - chr1_4:56151569-56151588 Msa0171410:intron 30.0%
! ATCAGAAGTTATGGGTTATT+GGG + chr1_4:56151665-56151684 None:intergenic 30.0%
! AATCAGAAGTTATGGGTTAT+TGG + chr1_4:56151666-56151685 None:intergenic 30.0%
! AAGTGAAGACGGAAAATTTT+GGG + chr1_4:56151842-56151861 None:intergenic 30.0%
! AAAGTGAAGACGGAAAATTT+TGG + chr1_4:56151843-56151862 None:intergenic 30.0%
! AAATTTTCCGTCTTCACTTT+TGG - chr1_4:56151843-56151862 Msa0171410:intron 30.0%
!! GTTTCTAGTCCCTATAAAAT+AGG - chr1_4:56150976-56150995 Msa0171410:intron 30.0%
! TAAGAGGTCCCTATTTTATA+GGG + chr1_4:56151930-56151949 None:intergenic 30.0%
! TTAAGAGGTCCCTATTTTAT+AGG + chr1_4:56151931-56151950 None:intergenic 30.0%
AAGTAAGGACTAAACTTAAG+AGG + chr1_4:56151946-56151965 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr1_4:56151991-56152010 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + chr1_4:56152250-56152269 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr1_4:56151448-56151467 Msa0171410:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr1_4:56151463-56151482 Msa0171410:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr1_4:56151464-56151483 Msa0171410:intron 30.0%
AGGAAAAGATATAACAGCAA+AGG + chr1_4:56157339-56157358 None:intergenic 30.0%
AGCTACATATTGAGTATTTG+GGG + chr1_4:56157610-56157629 None:intergenic 30.0%
!! AGACAATTTTAGTACTACTC+TGG + chr1_4:56157710-56157729 None:intergenic 30.0%
TTGTTGAAGGAATAGAAGTT+AGG - chr1_4:56148128-56148147 Msa0171410:intron 30.0%
GCAATACCAAGGCTTAAAAA+AGG + chr1_4:56133617-56133636 None:intergenic 35.0%
AACAATGTGTAGCAATACCA+AGG + chr1_4:56133628-56133647 None:intergenic 35.0%
TGGAAGGGATGTCAAAAAAT+GGG + chr1_4:56133878-56133897 None:intergenic 35.0%
ATGGAAGGGATGTCAAAAAA+TGG + chr1_4:56133879-56133898 None:intergenic 35.0%
ATATCAAGATGAGGACTACA+AGG + chr1_4:56134074-56134093 None:intergenic 35.0%
!!! CTGAGCTTCTTGTTGTTTTT+TGG - chr1_4:56134620-56134639 Msa0171410:intron 35.0%
CTTGTGTTCAAGATGATTGA+TGG - chr1_4:56134706-56134725 Msa0171410:intron 35.0%
! TTCAAGATGATTGATGGCTA+TGG - chr1_4:56134712-56134731 Msa0171410:intron 35.0%
! ACACAAATTGATAACACCAC+GGG + chr1_4:56134757-56134776 None:intergenic 35.0%
! GACACAAATTGATAACACCA+CGG + chr1_4:56134758-56134777 None:intergenic 35.0%
GTGTTATCAATTTGTGTCGA+AGG - chr1_4:56134760-56134779 Msa0171410:intron 35.0%
TTATCAATTTGTGTCGAAGG+TGG - chr1_4:56134763-56134782 Msa0171410:intron 35.0%
TTCTTGAAGGAATCGAAGTT+AGG - chr1_4:56134992-56135011 Msa0171410:intron 35.0%
!! TGCTTTAGAGAGAAACAGTT+TGG + chr1_4:56135100-56135119 None:intergenic 35.0%
GAGGGTTCCAAATCAATAAA+TGG + chr1_4:56135295-56135314 None:intergenic 35.0%
!! TTTTGGTCTGTTTAAGGCAT+TGG - chr1_4:56135357-56135376 Msa0171410:intron 35.0%
GAAGCTGAAACGTATTATGA+AGG - chr1_4:56135414-56135433 Msa0171410:intron 35.0%
CCCGTAATAGATGATAGATT+AGG + chr1_4:56136015-56136034 None:intergenic 35.0%
AGGTAATAGCATGTCGTATT+TGG + chr1_4:56136076-56136095 None:intergenic 35.0%
! CACATTTTCTTAACCACACA+AGG + chr1_4:56136326-56136345 None:intergenic 35.0%
GTGGTTAAGAAAATGTGTGA+TGG - chr1_4:56136329-56136348 Msa0171410:intron 35.0%
! AAAACTGACGTTTGACCTTT+TGG - chr1_4:56136371-56136390 Msa0171410:intron 35.0%
TAATCAATGGCAGATGTACA+TGG - chr1_4:56136438-56136457 Msa0171410:intron 35.0%
ATTCCACTAAAAAGTAGTGG+TGG + chr1_4:56136538-56136557 None:intergenic 35.0%
TCAATACCAAGGCTTAAAAC+AGG + chr1_4:56137025-56137044 None:intergenic 35.0%
GAACATGTGTATCAATACCA+AGG + chr1_4:56137036-56137055 None:intergenic 35.0%
CGGAAGGAATGTAAGAAAAT+AGG + chr1_4:56137290-56137309 None:intergenic 35.0%
TCAACCACTAAGATTGCATT+TGG - chr1_4:56137461-56137480 Msa0171410:intron 35.0%
CAACCACTAAGATTGCATTT+GGG - chr1_4:56137462-56137481 Msa0171410:intron 35.0%
TATCCCAAATGCAATCTTAG+TGG + chr1_4:56137468-56137487 None:intergenic 35.0%
TCGAAAAGTCTTAGAAAGGA+CGG + chr1_4:56137617-56137636 None:intergenic 35.0%
CAGATCGAAAAGTCTTAGAA+AGG + chr1_4:56137621-56137640 None:intergenic 35.0%
ATTCCAGACATCATCAGAAT+CGG + chr1_4:56137647-56137666 None:intergenic 35.0%
AGGATAGATGATATGTCAGA+AGG + chr1_4:56137679-56137698 None:intergenic 35.0%
TGAAATGCAGAGCTTTCAAT+TGG - chr1_4:56138185-56138204 Msa0171410:intron 35.0%
TAGATTTCTCACCATTGCTT+GGG - chr1_4:56138245-56138264 Msa0171410:intron 35.0%
TTAAGAGCTAACCTAGAATC+AGG + chr1_4:56138303-56138322 None:intergenic 35.0%
CGCCCATAATAGAATTTGAT+AGG + chr1_4:56138408-56138427 None:intergenic 35.0%
AGCACTGCTCCAATTAAAAT+AGG + chr1_4:56138540-56138559 None:intergenic 35.0%
TTTATTGTCCACAAATCACG+GGG - chr1_4:56138622-56138641 Msa0171410:intron 35.0%
! TTTGGCAGCTTTATATCCAT+TGG + chr1_4:56138722-56138741 None:intergenic 35.0%
ATAAAGCTGCCAAATCATTC+TGG - chr1_4:56138728-56138747 Msa0171410:intron 35.0%
TAAAGCTGCCAAATCATTCT+GGG - chr1_4:56138729-56138748 Msa0171410:intron 35.0%
GTGAAATTCCCAGAATGATT+TGG + chr1_4:56138740-56138759 None:intergenic 35.0%
TCTGGGAATTTCACGAAAAT+TGG - chr1_4:56138746-56138765 Msa0171410:intron 35.0%
TTCACTTGGAAGAAAAAACG+GGG + chr1_4:56139105-56139124 None:intergenic 35.0%
GTTCACTTGGAAGAAAAAAC+GGG + chr1_4:56139106-56139125 None:intergenic 35.0%
!! TCTAACAAGAAGTGTTCACT+TGG + chr1_4:56139119-56139138 None:intergenic 35.0%
GAGAATTACACCCTCAAATA+TGG - chr1_4:56139382-56139401 Msa0171410:intron 35.0%
GTACCATTACCACTCTATTA+TGG - chr1_4:56139445-56139464 Msa0171410:intron 35.0%
GAAGAAGTTAGACGTTAGAA+TGG + chr1_4:56139561-56139580 None:intergenic 35.0%
AGACCATTCTTAATTCCGAA+AGG - chr1_4:56139712-56139731 Msa0171410:intron 35.0%
TGTCCTTTCGGAATTAAGAA+TGG + chr1_4:56139718-56139737 None:intergenic 35.0%
GAAAGGACATTAAACCGAAA+AGG - chr1_4:56139729-56139748 Msa0171410:intron 35.0%
ATTAAACCGAAAAGGGACTA+TGG - chr1_4:56139737-56139756 Msa0171410:intron 35.0%
! TTAAGACCATAGTCCCTTTT+CGG + chr1_4:56139746-56139765 None:intergenic 35.0%
AAGAACACTCTTAATTCCGA+AGG - chr1_4:56139764-56139783 Msa0171410:intron 35.0%
AGAACACTCTTAATTCCGAA+GGG - chr1_4:56139765-56139784 Msa0171410:intron 35.0%
TAATTCCGAAGGGACAAAAA+AGG - chr1_4:56139775-56139794 Msa0171410:intron 35.0%
AATTCCGAAGGGACAAAAAA+GGG - chr1_4:56139776-56139795 Msa0171410:intron 35.0%
! AAGAGTTTCATTGAGTTGTC+GGG + chr1_4:56139862-56139881 None:intergenic 35.0%
GGGAGAGTTTGTAACTAATT+TGG - chr1_4:56139920-56139939 Msa0171410:intron 35.0%
! TTGTTACTTGAGCTGATCTT+TGG + chr1_4:56139984-56140003 None:intergenic 35.0%
AGAAACAAATCCACTAACGA+AGG - chr1_4:56140025-56140044 Msa0171410:intron 35.0%
GGAAAGATAGGAAATTCAGT+TGG - chr1_4:56140046-56140065 Msa0171410:intron 35.0%
!! TATGCAAAGGTTCAAGTTGT+AGG + chr1_4:56140424-56140443 None:intergenic 35.0%
GAATATTAACCGCTATGCAA+AGG + chr1_4:56140437-56140456 None:intergenic 35.0%
CTTATGAAAAGGTTTGTGTG+TGG + chr1_4:56140510-56140529 None:intergenic 35.0%
! CACACACAAACCTTTTCATA+AGG - chr1_4:56140508-56140527 Msa0171410:intron 35.0%
GATCTATACTCTATGTTGAG+TGG + chr1_4:56140687-56140706 None:intergenic 35.0%
! TACCCATTGAACCTATTTCT+TGG - chr1_4:56140804-56140823 Msa0171410:intron 35.0%
! ACCCATTGAACCTATTTCTT+GGG - chr1_4:56140805-56140824 Msa0171410:intron 35.0%
TCCCAAGAAATAGGTTCAAT+GGG + chr1_4:56140809-56140828 None:intergenic 35.0%
ATCCCAAGAAATAGGTTCAA+TGG + chr1_4:56140810-56140829 None:intergenic 35.0%
TTATCATCACTTGTGACCTT+TGG - chr1_4:56140850-56140869 Msa0171410:intron 35.0%
TATCATCACTTGTGACCTTT+GGG - chr1_4:56140851-56140870 Msa0171410:intron 35.0%
CTAAACACATCCAATAGGAT+GGG + chr1_4:56140884-56140903 None:intergenic 35.0%
AAGTCCTAAACACATCCAAT+AGG + chr1_4:56140889-56140908 None:intergenic 35.0%
TGACGAAAGGAATTACTAGA+AGG + chr1_4:56140913-56140932 None:intergenic 35.0%
CTAGTAATTCCTTTCGTCAA+AGG - chr1_4:56140914-56140933 Msa0171410:intron 35.0%
CAAATTAACACTTCGGACAA+CGG - chr1_4:56141094-56141113 Msa0171410:intron 35.0%
TCGCTTTAATACTCATCTGA+AGG - chr1_4:56141280-56141299 Msa0171410:intron 35.0%
CATAAGAAGACTATGACTCT+AGG + chr1_4:56141402-56141421 None:intergenic 35.0%
CTAGAGTCATAGTCTTCTTA+TGG - chr1_4:56141400-56141419 Msa0171410:intron 35.0%
ATGCTATAGAAAGAGTCATG+AGG + chr1_4:56141428-56141447 None:intergenic 35.0%
TTTCACGACATCAACAATGT+CGG - chr1_4:56141490-56141509 Msa0171410:intron 35.0%
! TATATTCAATGGCTTGCCTA+AGG - chr1_4:56141519-56141538 Msa0171410:intron 35.0%
AAGTGTAAGAACACTTGAGA+TGG + chr1_4:56141582-56141601 None:intergenic 35.0%
ATCTCAAGTGTTCTTACACT+TGG - chr1_4:56141581-56141600 Msa0171410:intron 35.0%
! GAAGACAACTTGCTCATATT+TGG + chr1_4:56141809-56141828 None:intergenic 35.0%
TACTATTGAGTTATGAACGG+CGG - chr1_4:56142073-56142092 Msa0171410:intron 35.0%
! TAAAGGGACTAGTACTCTTA+TGG - chr1_4:56142097-56142116 Msa0171410:intron 35.0%
ATGGATATGATTCTAGTGAC+TGG - chr1_4:56142116-56142135 Msa0171410:intron 35.0%
GCAAACTAATCGGTTGTATT+TGG + chr1_4:56142259-56142278 None:intergenic 35.0%
CCTCATAGTTGCAAACTAAT+CGG + chr1_4:56142269-56142288 None:intergenic 35.0%
! ATTTTTACGTTGGGAAAACG+GGG + chr1_4:56142315-56142334 None:intergenic 35.0%
AGTAATTCAAAACTTCGCAG+CGG - chr1_4:56142442-56142461 Msa0171410:intron 35.0%
AAAAATAATCTTTGGCACGC+AGG - chr1_4:56142481-56142500 Msa0171410:intron 35.0%
TTTGAGAAGTAGAAGTTGCA+TGG + chr1_4:56143262-56143281 None:intergenic 35.0%
AGACATCTTCATTATGCATG+TGG - chr1_4:56143299-56143318 Msa0171410:CDS 35.0%
! CTTTTATGACCTTAGAGAAG+AGG + chr1_4:56143344-56143363 None:intergenic 35.0%
TAAGGTCATAAAAGACCTGT+CGG - chr1_4:56143350-56143369 Msa0171410:CDS 35.0%
TCCTTTATGACCTTAGAGAT+GGG + chr1_4:56143386-56143405 None:intergenic 35.0%
TAAGGTCATAAAGGACATGT+CGG - chr1_4:56143391-56143410 Msa0171410:CDS 35.0%
TCCTTTATGACCTTAGAGAT+GGG + chr1_4:56143386-56143405 None:intergenic 35.0%
TAAGGTCATAAAGGACTTGT+CGG - chr1_4:56143432-56143451 Msa0171410:intron 35.0%
TGTTCATGAAGTTGTCTAAG+TGG + chr1_4:56143522-56143541 None:intergenic 35.0%
TGTCAAGATGTCAAGATGTT+AGG + chr1_4:56143555-56143574 None:intergenic 35.0%
CTTAGCATCTTGACAACATA+TGG - chr1_4:56143645-56143664 Msa0171410:intron 35.0%
TGATATCTTTCCAGTAGCTT+TGG + chr1_4:56143858-56143877 None:intergenic 35.0%
AAACACGAAAGTTGTAGGTA+TGG + chr1_4:56144267-56144286 None:intergenic 35.0%
TCAAGTTTCACCTAATCTCA+TGG - chr1_4:56144359-56144378 Msa0171410:intron 35.0%
AGAAGCAATAAGCGATGAAA+TGG + chr1_4:56144623-56144642 None:intergenic 35.0%
!! ATAGCTTCTTTAAGGCTTAG+TGG - chr1_4:56144670-56144689 Msa0171410:intron 35.0%
! CCCCACTATTCTTTATTTAC+AGG - chr1_4:56144896-56144915 Msa0171410:intron 35.0%
CCCCTGTAAATAAAGAATAG+TGG + chr1_4:56144901-56144920 None:intergenic 35.0%
CCCAATGAATACACATTCAT+AGG - chr1_4:56145012-56145031 Msa0171410:intron 35.0%
GCCTATGAATGTGTATTCAT+TGG + chr1_4:56145016-56145035 None:intergenic 35.0%
TCTGGACTATATTTGGATTC+TGG + chr1_4:56145068-56145087 None:intergenic 35.0%
! TTTTTGAACTTGGGATTGTC+TGG + chr1_4:56145086-56145105 None:intergenic 35.0%
ATTCTTGTGGGAAAAGATTG+CGG + chr1_4:56145551-56145570 None:intergenic 35.0%
! CATCTGGTTTATACGTATGT+TGG + chr1_4:56145889-56145908 None:intergenic 35.0%
ATTTGGGAATGTATGTGTCA+AGG - chr1_4:56145994-56146013 Msa0171410:intron 35.0%
!! TTTTGGGAATGTATGTGTCA+AGG - chr1_4:56146057-56146076 Msa0171410:intron 35.0%
! AGTCTTCCTTGCACAATTTT+GGG + chr1_4:56146413-56146432 None:intergenic 35.0%
! TAGTCTTCCTTGCACAATTT+TGG + chr1_4:56146414-56146433 None:intergenic 35.0%
! TTGAGAGTGTAATTCTCGAA+CGG + chr1_4:56146508-56146527 None:intergenic 35.0%
GTACTGTTACCACTCTATTA+TGG - chr1_4:56146574-56146593 Msa0171410:intron 35.0%
GTGGTAACATCATATTTGAG+TGG + chr1_4:56146608-56146627 None:intergenic 35.0%
GAAGAAGTTAGACGTTAGAA+TGG + chr1_4:56139561-56139580 None:intergenic 35.0%
AAGACCATTCTTAATTCCGA+AGG - chr1_4:56139711-56139730 Msa0171410:intron 35.0%
AGACCATTCTTAATTCCGAA+GGG - chr1_4:56139712-56139731 Msa0171410:intron 35.0%
! TTTTCGGTTTAATGTCCCTT+CGG + chr1_4:56146859-56146878 None:intergenic 35.0%
AAGGGACATTAAACCGAAAA+GGG - chr1_4:56146859-56146878 Msa0171410:intron 35.0%
ATTAAACCGAAAAGGGACTA+TGG - chr1_4:56139737-56139756 Msa0171410:intron 35.0%
! TTAAGACCATAGTCCCTTTT+CGG + chr1_4:56139746-56139765 None:intergenic 35.0%
AAGAACACTCTTAATTCCGA+AGG - chr1_4:56139764-56139783 Msa0171410:intron 35.0%
AGAACACTCTTAATTCCGAA+GGG - chr1_4:56139765-56139784 Msa0171410:intron 35.0%
TAATTCCGAAGGGACAAAAA+AGG - chr1_4:56139775-56139794 Msa0171410:intron 35.0%
AATTCCGAAGGGACAAAAAA+GGG - chr1_4:56139776-56139795 Msa0171410:intron 35.0%
! AAGAGTTTCATTGAGTTGTC+GGG + chr1_4:56139862-56139881 None:intergenic 35.0%
GACAACTCAATGAAACTCTT+TGG - chr1_4:56139862-56139881 Msa0171410:intron 35.0%
! TTGTTACTTGAGCTGATCTT+TGG + chr1_4:56139984-56140003 None:intergenic 35.0%
AGAAACAAATCCACTAACGA+AGG - chr1_4:56140025-56140044 Msa0171410:intron 35.0%
TCCACTAACGAAGGAAAAAT+AGG - chr1_4:56147163-56147182 Msa0171410:intron 35.0%
!! TCCTATTTTTCCTTCGTTAG+TGG + chr1_4:56147167-56147186 None:intergenic 35.0%
AACTTCAATAACTGGAATGG+TGG - chr1_4:56147484-56147503 Msa0171410:intron 35.0%
! ACACAAATGGGGTATTTAGA+CGG + chr1_4:56147666-56147685 None:intergenic 35.0%
GATTCATAACGACACAAATG+GGG + chr1_4:56147677-56147696 None:intergenic 35.0%
GAGATTCATAACGACACAAA+TGG + chr1_4:56147679-56147698 None:intergenic 35.0%
ATACTGAGTATTTGGAGACA+AGG + chr1_4:56147828-56147847 None:intergenic 35.0%
GAGGATAGTTATGAAATCCA+TGG + chr1_4:56147883-56147902 None:intergenic 35.0%
TGGATTTCATAACTATCCTC+TGG - chr1_4:56147883-56147902 Msa0171410:intron 35.0%
TCATTTGGACTTCATCTTCT+AGG + chr1_4:56148072-56148091 None:intergenic 35.0%
TGAAGTCCAAATGAATGCTA+AGG - chr1_4:56148078-56148097 Msa0171410:intron 35.0%
ATGCTAAGGAGACAGATTAT+TGG - chr1_4:56148092-56148111 Msa0171410:intron 35.0%
GAGACAGATTATTGGAAGAA+AGG - chr1_4:56148100-56148119 Msa0171410:intron 35.0%
AAGAAAGGTCTCTTTGTTGA+AGG - chr1_4:56148115-56148134 Msa0171410:intron 35.0%
CTTGTCATGGTTCAATATAG+TGG - chr1_4:56148278-56148297 Msa0171410:intron 35.0%
CCGAACTCGAGTTAAAAAAA+AGG + chr1_4:56148549-56148568 None:intergenic 35.0%
TAAGTTCTACCTTGTGAATC+TGG - chr1_4:56148784-56148803 Msa0171410:intron 35.0%
TTTGTTTAAAAGCCTGCACA+AGG - chr1_4:56148889-56148908 Msa0171410:intron 35.0%
AGTTGAACTTGAGCTAAGTA+AGG + chr1_4:56149054-56149073 None:intergenic 35.0%
!!! ATCACGAACTATTTTCGAGT+TGG - chr1_4:56149159-56149178 Msa0171410:intron 35.0%
!!! GAACTATTTTCGAGTTGGTT+CGG - chr1_4:56149164-56149183 Msa0171410:intron 35.0%
TATAACAACACAGGCTCTTA+GGG - chr1_4:56149972-56149991 Msa0171410:intron 35.0%
! AAACCTCTTTTGTTGGGAAT+TGG + chr1_4:56150651-56150670 None:intergenic 35.0%
AATTCCCAACAAAAGAGGTT+TGG - chr1_4:56150650-56150669 Msa0171410:intron 35.0%
GATAGATTAGGGTTGAAACT+TGG + chr1_4:56150676-56150695 None:intergenic 35.0%
TGGATGACTTAACTACTACA+TGG + chr1_4:56150848-56150867 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG + chr1_4:56151173-56151192 None:intergenic 35.0%
AGTTGCACTTAGAGGATATT+CGG + chr1_4:56151547-56151566 None:intergenic 35.0%
ACTAATCAATCGAACTAGGT+AGG - chr1_4:56151573-56151592 Msa0171410:intron 35.0%
TACAACAATGTCAAATCTCG+AGG + chr1_4:56151622-56151641 None:intergenic 35.0%
CATTGTTGTATTCCTAGAGT+TGG - chr1_4:56151632-56151651 Msa0171410:intron 35.0%
TTGGATTTGATTCCAACTCT+AGG + chr1_4:56151647-56151666 None:intergenic 35.0%
TTCCAGCAATCAGAAGTTAT+GGG + chr1_4:56151673-56151692 None:intergenic 35.0%
ATTCCAGCAATCAGAAGTTA+TGG + chr1_4:56151674-56151693 None:intergenic 35.0%
! CATCTCATCGAAATGCTTTT+GGG - chr1_4:56151705-56151724 Msa0171410:intron 35.0%
! AGTGAAGACGGAAAATTTTG+GGG + chr1_4:56151841-56151860 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG + chr1_4:56151173-56151192 None:intergenic 35.0%
AGTTGCACTTAGAGGATATT+CGG + chr1_4:56151547-56151566 None:intergenic 35.0%
ACTAATCAATCGAACTAGGT+AGG - chr1_4:56151573-56151592 Msa0171410:intron 35.0%
TACAACAATGTCAAATGTCG+AGG + chr1_4:56152564-56152583 None:intergenic 35.0%
CATTGTTGTATTCCTAGAGT+TGG - chr1_4:56151632-56151651 Msa0171410:intron 35.0%
TTCCAGCAATCAGAAGTTAT+GGG + chr1_4:56151673-56151692 None:intergenic 35.0%
ATTCCAGCAATCAGAAGTTA+TGG + chr1_4:56151674-56151693 None:intergenic 35.0%
! CATCTCATCGAAATGCTTTT+GGG - chr1_4:56151705-56151724 Msa0171410:intron 35.0%
! AGTGAAGACGGAAAATTTTG+GGG + chr1_4:56151841-56151860 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG + chr1_4:56151173-56151192 None:intergenic 35.0%
AGTTGCACTTAGAGGATATT+CGG + chr1_4:56151547-56151566 None:intergenic 35.0%
ACTAATCAATCGAACTAGGT+AGG - chr1_4:56151573-56151592 Msa0171410:intron 35.0%
TACAACAATGTCAAATCTCG+AGG + chr1_4:56151622-56151641 None:intergenic 35.0%
CATTGTTGTATTCCTAGAGT+TGG - chr1_4:56151632-56151651 Msa0171410:intron 35.0%
TTCCAGCAATCAGAAGTTAT+GGG + chr1_4:56151673-56151692 None:intergenic 35.0%
ATTCCAGCAATCAGAAGTTA+TGG + chr1_4:56151674-56151693 None:intergenic 35.0%
! CATCTCATCGAAATGCTTTT+GGG - chr1_4:56151705-56151724 Msa0171410:intron 35.0%
! AGTGAAGACGGAAAATTTTG+GGG + chr1_4:56151841-56151860 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG + chr1_4:56151173-56151192 None:intergenic 35.0%
AGTTGCACTTAGAGGATATT+CGG + chr1_4:56151547-56151566 None:intergenic 35.0%
ACTAATCAATCGAACTAGGT+AGG - chr1_4:56151573-56151592 Msa0171410:intron 35.0%
TACAACAATGTCAAATGTCG+AGG + chr1_4:56152564-56152583 None:intergenic 35.0%
CATTGTTGTATTCCTAGAGT+TGG - chr1_4:56151632-56151651 Msa0171410:intron 35.0%
TTCCAGCAATCAGAAGTTAT+GGG + chr1_4:56151673-56151692 None:intergenic 35.0%
ATTCCAGCAATCAGAAGTTA+TGG + chr1_4:56151674-56151693 None:intergenic 35.0%
! CATCTCATCGAAATGCTTTT+GGG - chr1_4:56151705-56151724 Msa0171410:intron 35.0%
! AGTGAAGACGGAAAATTTTG+GGG + chr1_4:56151841-56151860 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG + chr1_4:56151173-56151192 None:intergenic 35.0%
AGTTGCACTTAGAGGATATT+CGG + chr1_4:56151547-56151566 None:intergenic 35.0%
ACTAATCAATCGAACTAGGT+AGG - chr1_4:56151573-56151592 Msa0171410:intron 35.0%
TACAACAATGTCAAATGTCG+AGG + chr1_4:56152564-56152583 None:intergenic 35.0%
CATTGTTGTATTCCTAGAGT+TGG - chr1_4:56151632-56151651 Msa0171410:intron 35.0%
TTCCAGCAATCAGAAGTTAT+GGG + chr1_4:56151673-56151692 None:intergenic 35.0%
ATTCCAGCAATCAGAAGTTA+TGG + chr1_4:56151674-56151693 None:intergenic 35.0%
! CATCTCATCGAAATGCTTTT+GGG - chr1_4:56151705-56151724 Msa0171410:intron 35.0%
! AGTGAAGACGGAAAATTTTG+GGG + chr1_4:56151841-56151860 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG + chr1_4:56151173-56151192 None:intergenic 35.0%
AGTTGCACTTAGAGGATATT+CGG + chr1_4:56151547-56151566 None:intergenic 35.0%
ACTAATCAATCGAACTAGGT+AGG - chr1_4:56151573-56151592 Msa0171410:intron 35.0%
TACAACAATGTCAAATCTCG+AGG + chr1_4:56151622-56151641 None:intergenic 35.0%
CATTGTTGTATTCCTAGAGT+TGG - chr1_4:56151632-56151651 Msa0171410:intron 35.0%
TTCCAGCAATCAGAAGTTAT+GGG + chr1_4:56151673-56151692 None:intergenic 35.0%
ATTCCAGCAATCAGAAGTTA+TGG + chr1_4:56151674-56151693 None:intergenic 35.0%
! CATCTCATCGAAATGCTTTT+GGG - chr1_4:56151705-56151724 Msa0171410:intron 35.0%
! AGTGAAGACGGAAAATTTTG+GGG + chr1_4:56151841-56151860 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG + chr1_4:56151173-56151192 None:intergenic 35.0%
AGTTGCACTTAGAGGATATT+CGG + chr1_4:56151547-56151566 None:intergenic 35.0%
CTAAGGGTTGAAAGAGTTAA+AGG - chr1_4:56157395-56157414 Msa0171410:intron 35.0%
TTCAAGATGATTGATGCCAA+AGG - chr1_4:56157639-56157658 Msa0171410:intron 35.0%
TGTCCTATAGAGTTATCAGT+TGG - chr1_4:56157672-56157691 Msa0171410:intron 35.0%
ACACCAACTGATAACTCTAT+AGG + chr1_4:56157678-56157697 None:intergenic 35.0%
TTCAATTCAGGCTTAGAAGA+TGG - chr1_4:56157843-56157862 Msa0171410:intron 35.0%
ATGTTAAGGAGCTACATCTT+TGG - chr1_4:56157880-56157899 Msa0171410:intron 35.0%
! TCTGATGTCCTTGTTGATGA+AGG + chr1_4:56133769-56133788 None:intergenic 40.0%
TCATCAACAAGGACATCAGA+TGG - chr1_4:56133769-56133788 Msa0171410:CDS 40.0%
! ATGATGACTGATGACGTTCA+TGG - chr1_4:56133807-56133826 Msa0171410:CDS 40.0%
TGTAATAAGCATGGCAGACA+AGG + chr1_4:56133836-56133855 None:intergenic 40.0%
GGAAGGGATGTCAAAAAATG+GGG + chr1_4:56133877-56133896 None:intergenic 40.0%
AAATGAGTCAGCTTGTGTCT+AGG - chr1_4:56134048-56134067 Msa0171410:intron 40.0%
TTGAAATGCGCACATGTCTA+CGG - chr1_4:56134116-56134135 Msa0171410:intron 40.0%
AGGTCAAATTGTTTGGGCTA+AGG - chr1_4:56134439-56134458 Msa0171410:intron 40.0%
GGTCAAATTGTTTGGGCTAA+GGG - chr1_4:56134440-56134459 Msa0171410:intron 40.0%
AAATTGTTTGGGCTAAGGGT+TGG - chr1_4:56134444-56134463 Msa0171410:intron 40.0%
AAGCTGCATACTGAGTGTTT+CGG + chr1_4:56134684-56134703 None:intergenic 40.0%
TGTCTGTTTGGATCCAAATG+TGG - chr1_4:56134804-56134823 Msa0171410:intron 40.0%
TGTTTGGATCCAAATGTGGA+AGG - chr1_4:56134808-56134827 Msa0171410:intron 40.0%
AAGTGTGGTCTCTTTCTTGA+AGG - chr1_4:56134979-56134998 Msa0171410:intron 40.0%
AACCCTCAACTATGAACGTT+GGG - chr1_4:56135308-56135327 Msa0171410:intron 40.0%
TATCACACAGTAGTGAGTAC+TGG + chr1_4:56135453-56135472 None:intergenic 40.0%
AATGGAAGCAATGTCTTAGG+TGG - chr1_4:56135502-56135521 Msa0171410:intron 40.0%
GTATGTGGAATCCAAGCATT+TGG + chr1_4:56136052-56136071 None:intergenic 40.0%
!! CATGTCGTATTTGGTGTATG+TGG + chr1_4:56136067-56136086 None:intergenic 40.0%
GGGTAAAGAGTAGTTCTCAA+AGG + chr1_4:56136096-56136115 None:intergenic 40.0%
!!! TAACTCACGCAGGAGTATTT+TGG + chr1_4:56136149-56136168 None:intergenic 40.0%
CACACAAGGTGTGAAAAAGT+TGG + chr1_4:56136312-56136331 None:intergenic 40.0%
!!! CAACTTTTTCACACCTTGTG+TGG - chr1_4:56136310-56136329 Msa0171410:intron 40.0%
!!! TCTCCACCACTACTTTTTAG+TGG - chr1_4:56136532-56136551 Msa0171410:intron 40.0%
! TAACTCATGCAGGGCTATTT+TGG - chr1_4:56136701-56136720 Msa0171410:intron 40.0%
!! GAAGTTCCTGTTTTAAGCCT+TGG - chr1_4:56137016-56137035 Msa0171410:intron 40.0%
ACTAATGAGCATGGTTGACA+AGG + chr1_4:56137241-56137260 None:intergenic 40.0%
TGAGTGTGTGACAATGTACT+CGG - chr1_4:56137332-56137351 Msa0171410:intron 40.0%
TGCCAACGTTTCAACCAAAA+AGG - chr1_4:56137717-56137736 Msa0171410:intron 40.0%
!!! AGCCTTTTTGGTTGAAACGT+TGG + chr1_4:56137722-56137741 None:intergenic 40.0%
TGACCATGATCGATGATGAT+AGG + chr1_4:56137769-56137788 None:intergenic 40.0%
CATCATCGATCATGGTCAAA+AGG - chr1_4:56137771-56137790 Msa0171410:intron 40.0%
CTGTAGAGAATATTGGCATC+TGG + chr1_4:56138084-56138103 None:intergenic 40.0%
GCTACATACGAATGCTCAAT+TGG - chr1_4:56138103-56138122 Msa0171410:intron 40.0%
CTAGATTTCTCACCATTGCT+TGG - chr1_4:56138244-56138263 Msa0171410:intron 40.0%
AGATTTCTCACCATTGCTTG+GGG - chr1_4:56138246-56138265 Msa0171410:intron 40.0%
GTGATGATCGATATTGCAAC+TGG - chr1_4:56138268-56138287 Msa0171410:intron 40.0%
GGATTGTTATGCCTGATTCT+AGG - chr1_4:56138289-56138308 Msa0171410:intron 40.0%
AGAAATACAATCTGAGAGCG+CGG + chr1_4:56138898-56138917 None:intergenic 40.0%
GCATGATAAAAAATCGGGAG+AGG - chr1_4:56138963-56138982 Msa0171410:intron 40.0%
TTGAATATGCCATACCAGGA+AGG - chr1_4:56138986-56139005 Msa0171410:intron 40.0%
AAAGAAAAGCCTTCCTGGTA+TGG + chr1_4:56138998-56139017 None:intergenic 40.0%
GCAAAAAAGAAAAGCCTTCC+TGG + chr1_4:56139003-56139022 None:intergenic 40.0%
! AGTCTGCCTTGCACAATTTT+GGG + chr1_4:56139284-56139303 None:intergenic 40.0%
! TAGTCTGCCTTGCACAATTT+TGG + chr1_4:56139285-56139304 None:intergenic 40.0%
!!! TAGCTGAGCTTGTTTTATCC+TGG + chr1_4:56139323-56139342 None:intergenic 40.0%
! TTGAGGGTGTAATTCTCGAA+CGG + chr1_4:56139379-56139398 None:intergenic 40.0%
GCACCATAATAGAGTGGTAA+TGG + chr1_4:56139451-56139470 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG + chr1_4:56139479-56139498 None:intergenic 40.0%
!!! ATCTCCCTTTTTTGTCCCTT+CGG + chr1_4:56139783-56139802 None:intergenic 40.0%
TCGTCAACACAAGTCAAGAA+AGG - chr1_4:56139818-56139837 Msa0171410:intron 40.0%
CGTCAACACAAGTCAAGAAA+GGG - chr1_4:56139819-56139838 Msa0171410:intron 40.0%
! TAGGTGAGCTCTCCTTTTAT+AGG - chr1_4:56139899-56139918 Msa0171410:intron 40.0%
! AGGTGAGCTCTCCTTTTATA+GGG - chr1_4:56139900-56139919 Msa0171410:intron 40.0%
TCCACTAACGAAGGAAAGAT+AGG - chr1_4:56140034-56140053 Msa0171410:intron 40.0%
TCCTATCTTTCCTTCGTTAG+TGG + chr1_4:56140038-56140057 None:intergenic 40.0%
GTGGAAAGAAATTGGAAGGT+TGG + chr1_4:56140299-56140318 None:intergenic 40.0%
GAAGGTGGAAAGAAATTGGA+AGG + chr1_4:56140303-56140322 None:intergenic 40.0%
GTGTGAAGGTGGAAAGAAAT+TGG + chr1_4:56140307-56140326 None:intergenic 40.0%
TTGTTGGAACATTGGTGTGA+AGG + chr1_4:56140321-56140340 None:intergenic 40.0%
AAATTCAAGTGGGGGATTGT+TGG + chr1_4:56140337-56140356 None:intergenic 40.0%
CAACTTGAACCTTTGCATAG+CGG - chr1_4:56140425-56140444 Msa0171410:intron 40.0%
TAGACTCACCTATACGAATG+TGG + chr1_4:56140637-56140656 None:intergenic 40.0%
CCTAAACACATCCAATAGGA+TGG + chr1_4:56140885-56140904 None:intergenic 40.0%
CCATCCTATTGGATGTGTTT+AGG - chr1_4:56140882-56140901 Msa0171410:intron 40.0%
CTAGCTACTCTCAAAAGGAA+CGG + chr1_4:56140981-56141000 None:intergenic 40.0%
ATCCCAGATACATTCCATAG+TGG - chr1_4:56141192-56141211 Msa0171410:intron 40.0%
GTCCACTATGGAATGTATCT+GGG + chr1_4:56141197-56141216 None:intergenic 40.0%
AGTCCACTATGGAATGTATC+TGG + chr1_4:56141198-56141217 None:intergenic 40.0%
!! GATATTGACTCAGTCCACTA+TGG + chr1_4:56141209-56141228 None:intergenic 40.0%
!! CTATGACTCTAGGATTTACG+AGG + chr1_4:56141392-56141411 None:intergenic 40.0%
AGGCAACTTTCACATCCATT+TGG - chr1_4:56142048-56142067 Msa0171410:intron 40.0%
!! TGGTACGGTTGATGAATACA+AGG + chr1_4:56142205-56142224 None:intergenic 40.0%
TATTCATCAACCGTACCATC+AGG - chr1_4:56142207-56142226 Msa0171410:intron 40.0%
!! CCGATTAGTTTGCAACTATG+AGG - chr1_4:56142266-56142285 Msa0171410:intron 40.0%
TTAGGTGCTCTGATACGTAA+CGG + chr1_4:56142603-56142622 None:intergenic 40.0%
CTATCTCTCACAGTGTCTTT+AGG + chr1_4:56142621-56142640 None:intergenic 40.0%
TCAAGATTAGATGCAGTCGT+GGG + chr1_4:56142647-56142666 None:intergenic 40.0%
ATCAAGATTAGATGCAGTCG+TGG + chr1_4:56142648-56142667 None:intergenic 40.0%
GGAAATGTTGCTCTTCGTAT+GGG + chr1_4:56142684-56142703 None:intergenic 40.0%
TGGAAATGTTGCTCTTCGTA+TGG + chr1_4:56142685-56142704 None:intergenic 40.0%
AAGGTCATAAAAGACCTGTC+GGG - chr1_4:56143351-56143370 Msa0171410:CDS 40.0%
CTTTATGACCTTAGAGATGG+GGG + chr1_4:56143384-56143403 None:intergenic 40.0%
CCTTTATGACCTTAGAGATG+GGG + chr1_4:56143385-56143404 None:intergenic 40.0%
GTCCTTTATGACCTTAGAGA+TGG + chr1_4:56143387-56143406 None:intergenic 40.0%
AAGGTCATAAAGGACATGTC+GGG - chr1_4:56143392-56143411 Msa0171410:CDS 40.0%
CTTTATGACCTTAGAGATGG+GGG + chr1_4:56143384-56143403 None:intergenic 40.0%
CCTTTATGACCTTAGAGATG+GGG + chr1_4:56143385-56143404 None:intergenic 40.0%
GTCCTTTATGACCTTAGAGA+TGG + chr1_4:56143387-56143406 None:intergenic 40.0%
AAGGTCATAAAGGACTTGTC+GGG - chr1_4:56143433-56143452 Msa0171410:intron 40.0%
TCATGTCAAACCAAAGCTAC+TGG - chr1_4:56143845-56143864 Msa0171410:intron 40.0%
GAGGTCTTAGCGAAATTGTA+CGG + chr1_4:56143975-56143994 None:intergenic 40.0%
ATGATGAAAATACTACGGGG+AGG + chr1_4:56143994-56144013 None:intergenic 40.0%
!! ATCGGTACAGAATTGGTCTT+AGG + chr1_4:56144100-56144119 None:intergenic 40.0%
!! GGTATTGATCGGTACAGAAT+TGG + chr1_4:56144107-56144126 None:intergenic 40.0%
ATGGTCAAATTACTGCACGT+AGG + chr1_4:56144187-56144206 None:intergenic 40.0%
GGTGTAAACACGAAAGTTGT+AGG + chr1_4:56144272-56144291 None:intergenic 40.0%
!! AAAACTGGTATTGATCGGTG+TGG + chr1_4:56144306-56144325 None:intergenic 40.0%
ACAGACCCTAGATAATCCAT+AGG + chr1_4:56144416-56144435 None:intergenic 40.0%
CCTCATTGGATGCTGAATTA+TGG + chr1_4:56144648-56144667 None:intergenic 40.0%
CCATAATTCAGCATCCAATG+AGG - chr1_4:56144645-56144664 Msa0171410:intron 40.0%
GGGATTGTCTGGACTATATT+TGG + chr1_4:56145075-56145094 None:intergenic 40.0%
! TCTTTTCCCACAAGAATGCA+AGG - chr1_4:56145554-56145573 Msa0171410:intron 40.0%
TGTGTACCTTGCATTCTTGT+GGG + chr1_4:56145563-56145582 None:intergenic 40.0%
TTGTGTACCTTGCATTCTTG+TGG + chr1_4:56145564-56145583 None:intergenic 40.0%
TTAACCGCATAGTTGTAGCT+GGG + chr1_4:56139338-56139357 None:intergenic 40.0%
TGTCCCTTCGGAATTAAGAA+TGG + chr1_4:56146847-56146866 None:intergenic 40.0%
GAAGGGACATTAAACCGAAA+AGG - chr1_4:56146858-56146877 Msa0171410:intron 40.0%
!!! ATCTCCCTTTTTTGTCCCTT+CGG + chr1_4:56139783-56139802 None:intergenic 40.0%
! TAGGTGAGCTCTCCTTTTAT+AGG - chr1_4:56139899-56139918 Msa0171410:intron 40.0%
! AGGTGAGCTCTCCTTTTATA+GGG - chr1_4:56139900-56139919 Msa0171410:intron 40.0%
GGGAGAGTTTGTAACTGATT+TGG - chr1_4:56147049-56147068 Msa0171410:intron 40.0%
GTGGAAAGAAATTGGAAGGT+TGG + chr1_4:56140299-56140318 None:intergenic 40.0%
GAAGGTGGAAAGAAATTGGA+AGG + chr1_4:56140303-56140322 None:intergenic 40.0%
GTGTGAAGGTGGAAAGAAAT+TGG + chr1_4:56140307-56140326 None:intergenic 40.0%
TTGTTGGAACATTGGTGTGA+AGG + chr1_4:56140321-56140340 None:intergenic 40.0%
TGGGTGTATTGTTGGAACAT+TGG + chr1_4:56147458-56147477 None:intergenic 40.0%
! CACAAATGGGGTATTTAGAC+GGG + chr1_4:56147665-56147684 None:intergenic 40.0%
! TGTAACTTTTTGTGCTGGAC+AGG - chr1_4:56147735-56147754 Msa0171410:intron 40.0%
AAGACGAAGATAAGCAACCT+CGG + chr1_4:56147765-56147784 None:intergenic 40.0%
TTGCTTATCTTCGTCTTGTG+TGG - chr1_4:56147768-56147787 Msa0171410:intron 40.0%
GTCTCCAAATACTCAGTATG+CGG - chr1_4:56147829-56147848 Msa0171410:intron 40.0%
TAAGCCGCATACTGAGTATT+TGG + chr1_4:56147836-56147855 None:intergenic 40.0%
TTCAAGATGAATGATGCCCA+TGG - chr1_4:56147863-56147882 Msa0171410:intron 40.0%
!! TATCCTCTGGAGTTATCAGT+TGG - chr1_4:56147896-56147915 Msa0171410:intron 40.0%
TGTCTGTTTGGATCCAAATG+TGG - chr1_4:56134804-56134823 Msa0171410:intron 40.0%
TGTTTGGATCCAAATGTGGA+AGG - chr1_4:56134808-56134827 Msa0171410:intron 40.0%
CTGTCTCCTTAGCATTCATT+TGG + chr1_4:56148087-56148106 None:intergenic 40.0%
ACTATAGGTGGTATTTACGG+TGG - chr1_4:56148348-56148367 Msa0171410:intron 40.0%
CTATAGGTGGTATTTACGGT+GGG - chr1_4:56148349-56148368 Msa0171410:intron 40.0%
GAATTAGAGCTTTCCCATCA+TGG + chr1_4:56148392-56148411 None:intergenic 40.0%
ATTATATTAGGGGCTAGGGT+TGG - chr1_4:56148437-56148456 Msa0171410:intron 40.0%
AGGCATGTTACTACCTAGAA+AGG - chr1_4:56148724-56148743 Msa0171410:intron 40.0%
GTAGTAACGTACACCTTTCT+AGG + chr1_4:56148740-56148759 None:intergenic 40.0%
TCACAAGGTAGAACTTACAC+TGG + chr1_4:56148781-56148800 None:intergenic 40.0%
TTTACAAAACTCCCCGATGT+GGG - chr1_4:56148848-56148867 Msa0171410:intron 40.0%
ACACTCAAATAGTCCCACAT+CGG + chr1_4:56148864-56148883 None:intergenic 40.0%
AAGAAGTTAGTACCTTGTGC+AGG + chr1_4:56148904-56148923 None:intergenic 40.0%
! TAAGTAAGGTTCGACTCGTT+TGG + chr1_4:56149040-56149059 None:intergenic 40.0%
CAACTCAAGTTCGACTCATT+TGG - chr1_4:56149098-56149117 Msa0171410:intron 40.0%
TTCATTGCCAGCCCTAATTA+GGG - chr1_4:56149187-56149206 Msa0171410:intron 40.0%
ATACCCATTTGCCTCTATCT+AGG - chr1_4:56149627-56149646 Msa0171410:intron 40.0%
CTATAACAACACAGGCTCTT+AGG - chr1_4:56149971-56149990 Msa0171410:intron 40.0%
AAACTCAGAACCGGTCAAAT+TGG - chr1_4:56150521-56150540 Msa0171410:intron 40.0%
GCTAGTTCATCCAATTTGAC+CGG + chr1_4:56150534-56150553 None:intergenic 40.0%
CATCCAATTCCCAACAAAAG+AGG - chr1_4:56150645-56150664 Msa0171410:intron 40.0%
! TTGGCCAAACCTCTTTTGTT+GGG + chr1_4:56150657-56150676 None:intergenic 40.0%
AGTCATCCACTTAATGCCTA+TGG - chr1_4:56150859-56150878 Msa0171410:intron 40.0%
AAGCTACCATAGGCATTAAG+TGG + chr1_4:56150868-56150887 None:intergenic 40.0%
! CCTATGGTAGCTTTTATCCA+CGG - chr1_4:56150875-56150894 Msa0171410:intron 40.0%
TATAGTGGCAGTTATTACCC+AGG + chr1_4:56150929-56150948 None:intergenic 40.0%
GTCTATTCAGTTGCACTTAG+AGG + chr1_4:56151555-56151574 None:intergenic 40.0%
AACCCATAACTTCTGATTGC+TGG - chr1_4:56151668-56151687 Msa0171410:intron 40.0%
GCATTTCGATGAGATGGTAA+GGG + chr1_4:56151701-56151720 None:intergenic 40.0%
AGCATTTCGATGAGATGGTA+AGG + chr1_4:56151702-56151721 None:intergenic 40.0%
!! CCAAAAGCATTTCGATGAGA+TGG + chr1_4:56151707-56151726 None:intergenic 40.0%
! CCATCTCATCGAAATGCTTT+TGG - chr1_4:56151704-56151723 Msa0171410:intron 40.0%
! GTGAAGACGGAAAATTTTGG+GGG + chr1_4:56151840-56151859 None:intergenic 40.0%
GTCTATTCAGTTGCACTTAG+AGG + chr1_4:56151555-56151574 None:intergenic 40.0%
TTGGGTTTGATTCCAACTCT+AGG + chr1_4:56152589-56152608 None:intergenic 40.0%
AACCCATAACTTCTGATTGC+TGG - chr1_4:56151668-56151687 Msa0171410:intron 40.0%
GCATTTCGATGAGATGGTAA+GGG + chr1_4:56151701-56151720 None:intergenic 40.0%
AGCATTTCGATGAGATGGTA+AGG + chr1_4:56151702-56151721 None:intergenic 40.0%
!! CCAAAAGCATTTCGATGAGA+TGG + chr1_4:56151707-56151726 None:intergenic 40.0%
! CCATCTCATCGAAATGCTTT+TGG - chr1_4:56151704-56151723 Msa0171410:intron 40.0%
! GTGAAGACGGAAAATTTTGG+GGG + chr1_4:56151840-56151859 None:intergenic 40.0%
GTCTATTCAGTTGCACTTAG+AGG + chr1_4:56151555-56151574 None:intergenic 40.0%
TTGGGTTTGATTCCAACTCT+AGG + chr1_4:56152589-56152608 None:intergenic 40.0%
AACCCATAACTTCTGATTGC+TGG - chr1_4:56151668-56151687 Msa0171410:intron 40.0%
GCATTTCGATGAGATGGTAA+GGG + chr1_4:56151701-56151720 None:intergenic 40.0%
AGCATTTCGATGAGATGGTA+AGG + chr1_4:56151702-56151721 None:intergenic 40.0%
!! CCAAAAGCATTTCGATGAGA+TGG + chr1_4:56151707-56151726 None:intergenic 40.0%
! CCATCTCATCGAAATGCTTT+TGG - chr1_4:56151704-56151723 Msa0171410:intron 40.0%
GTCTATTCAGTTGCACTTAG+AGG + chr1_4:56151555-56151574 None:intergenic 40.0%
TTGGGTTTGATTCCAACTCT+AGG + chr1_4:56152589-56152608 None:intergenic 40.0%
AACCCATAACTTCTGATTGC+TGG - chr1_4:56151668-56151687 Msa0171410:intron 40.0%
GCATTTCGATGAGATGGTAA+GGG + chr1_4:56151701-56151720 None:intergenic 40.0%
AGCATTTCGATGAGATGGTA+AGG + chr1_4:56151702-56151721 None:intergenic 40.0%
!! CCAAAAGCATTTCGATGAGA+TGG + chr1_4:56151707-56151726 None:intergenic 40.0%
! CCATCTCATCGAAATGCTTT+TGG - chr1_4:56151704-56151723 Msa0171410:intron 40.0%
! GTGAAGACGGAAAATTTTGG+GGG + chr1_4:56151840-56151859 None:intergenic 40.0%
GTCTATTCAGTTGCACTTAG+AGG + chr1_4:56151555-56151574 None:intergenic 40.0%
TTGGGTTTGATTCCAACTCT+AGG + chr1_4:56152589-56152608 None:intergenic 40.0%
AACCCATAACTTCTGATTGC+TGG - chr1_4:56151668-56151687 Msa0171410:intron 40.0%
GCATTTCGATGAGATGGTAA+GGG + chr1_4:56151701-56151720 None:intergenic 40.0%
AGCATTTCGATGAGATGGTA+AGG + chr1_4:56151702-56151721 None:intergenic 40.0%
!! CCAAAAGCATTTCGATGAGA+TGG + chr1_4:56151707-56151726 None:intergenic 40.0%
! CCATCTCATCGAAATGCTTT+TGG - chr1_4:56151704-56151723 Msa0171410:intron 40.0%
! GTGAAGACGGAAAATTTTGG+GGG + chr1_4:56151840-56151859 None:intergenic 40.0%
GTCTATTCAGTTGCACTTAG+AGG + chr1_4:56151555-56151574 None:intergenic 40.0%
TTGGGTTTGATTCCAACTCT+AGG + chr1_4:56152589-56152608 None:intergenic 40.0%
AACCCATAACTTCTGATTGC+TGG - chr1_4:56151668-56151687 Msa0171410:intron 40.0%
GCATTTCGATGAGATGGTAA+GGG + chr1_4:56151701-56151720 None:intergenic 40.0%
AGCATTTCGATGAGATGGTA+AGG + chr1_4:56151702-56151721 None:intergenic 40.0%
!! CCAAAAGCATTTCGATGAGA+TGG + chr1_4:56151707-56151726 None:intergenic 40.0%
! CCATCTCATCGAAATGCTTT+TGG - chr1_4:56151704-56151723 Msa0171410:intron 40.0%
CAAAGGTAATTCACTAGCCA+CGG + chr1_4:56157322-56157341 None:intergenic 40.0%
ATTAACTGGGTAGGTCACTA+AGG - chr1_4:56157378-56157397 Msa0171410:intron 40.0%
TTAACTGGGTAGGTCACTAA+GGG - chr1_4:56157379-56157398 Msa0171410:intron 40.0%
CAAGAAGTTGAGCAACTTCA+GGG + chr1_4:56157539-56157558 None:intergenic 40.0%
TCAAGAAGTTGAGCAACTTC+AGG + chr1_4:56157540-56157559 None:intergenic 40.0%
TTGCTCAACTTCTTGAAGTG+TGG - chr1_4:56157544-56157563 Msa0171410:intron 40.0%
TGTGGTGGCTTGATATTAGT+GGG - chr1_4:56157562-56157581 Msa0171410:intron 40.0%
AGTATTTGGGGACAAGCTAA+GGG + chr1_4:56157598-56157617 None:intergenic 40.0%
!! AGGACAGTTCTGAAATCCTT+TGG + chr1_4:56157658-56157677 None:intergenic 40.0%
TGTCTGTTTGGATCCAAATG+TGG - chr1_4:56134804-56134823 Msa0171410:intron 40.0%
TTTGGATCCAAATGTGGAAG+TGG - chr1_4:56134810-56134829 Msa0171410:intron 40.0%
AGACGTCCTGATGAATGTTA+AGG - chr1_4:56157866-56157885 Msa0171410:intron 40.0%
GTAGCTCCTTAACATTCATC+AGG + chr1_4:56157875-56157894 None:intergenic 40.0%
AAGAGTGGTCTCTTTGTTGA+AGG - chr1_4:56157903-56157922 Msa0171410:intron 40.0%
ATTTGGCTGTCGCGACAATT+AGG + chr1_4:56133508-56133527 None:intergenic 45.0%
!!! GCTGCTCCTTTTTTAAGCCT+TGG - chr1_4:56133608-56133627 Msa0171410:CDS 45.0%
TGCTGAGTCCTTCATCAACA+AGG - chr1_4:56133758-56133777 Msa0171410:CDS 45.0%
AGGACATCAGATGGTCTTTG+AGG - chr1_4:56133778-56133797 Msa0171410:CDS 45.0%
AGGTCTGACAGTAGATTGCT+TGG + chr1_4:56134298-56134317 None:intergenic 45.0%
CACAAATGAACGTCTGAGTG+AGG + chr1_4:56134318-56134337 None:intergenic 45.0%
CTCACTCAGACGTTCATTTG+TGG - chr1_4:56134316-56134335 Msa0171410:intron 45.0%
ACTCAGACGTTCATTTGTGG+AGG - chr1_4:56134319-56134338 Msa0171410:intron 45.0%
ACCGGGTAGGTCAAATTGTT+TGG - chr1_4:56134432-56134451 Msa0171410:intron 45.0%
CCCAAACAATTTGACCTACC+CGG + chr1_4:56134436-56134455 None:intergenic 45.0%
CCGGGTAGGTCAAATTGTTT+GGG - chr1_4:56134433-56134452 Msa0171410:intron 45.0%
AGCTGCATACTGAGTGTTTC+GGG + chr1_4:56134683-56134702 None:intergenic 45.0%
TCAGAATCCAAACTATCCCG+TGG - chr1_4:56134738-56134757 Msa0171410:intron 45.0%
GATAACACCACGGGATAGTT+TGG + chr1_4:56134748-56134767 None:intergenic 45.0%
TTGGATCCAAATGTGGAAGG+TGG - chr1_4:56134811-56134830 Msa0171410:intron 45.0%
TGGATCCAAATGTGGAAGGT+GGG - chr1_4:56134812-56134831 Msa0171410:intron 45.0%
GGGTGGTTGGAGATTGAAAT+CGG - chr1_4:56134883-56134902 Msa0171410:intron 45.0%
GGTGGTTGGAGATTGAAATC+GGG - chr1_4:56134884-56134903 Msa0171410:intron 45.0%
GTGGTTGGAGATTGAAATCG+GGG - chr1_4:56134885-56134904 Msa0171410:intron 45.0%
ATCGGGGAGTTCTTCAATTC+AGG - chr1_4:56134901-56134920 Msa0171410:intron 45.0%
! GGATTGGGATAGCTGAGTTT+TGG - chr1_4:56135206-56135225 Msa0171410:intron 45.0%
GAACCCTCAACTATGAACGT+TGG - chr1_4:56135307-56135326 Msa0171410:intron 45.0%
ACCCTCAACTATGAACGTTG+GGG - chr1_4:56135309-56135328 Msa0171410:intron 45.0%
TCCCCAACGTTCATAGTTGA+GGG + chr1_4:56135313-56135332 None:intergenic 45.0%
ATCCCCAACGTTCATAGTTG+AGG + chr1_4:56135314-56135333 None:intergenic 45.0%
TCAACTATGAACGTTGGGGA+TGG - chr1_4:56135313-56135332 Msa0171410:intron 45.0%
!! ACACAGTAGTGAGTACTGGA+AGG + chr1_4:56135449-56135468 None:intergenic 45.0%
CACTACTGTGTGATAGACCA+TGG - chr1_4:56135458-56135477 Msa0171410:intron 45.0%
TGTTTCACCCTCCAAATGCT+TGG - chr1_4:56136038-56136057 Msa0171410:intron 45.0%
GTGGAATCCAAGCATTTGGA+GGG + chr1_4:56136048-56136067 None:intergenic 45.0%
TGTGGAATCCAAGCATTTGG+AGG + chr1_4:56136049-56136068 None:intergenic 45.0%
TAATGTGGAGCCATGTGAAG+AGG - chr1_4:56136407-56136426 Msa0171410:intron 45.0%
GTGGCTAGGAAAATGTGTGA+TGG + chr1_4:56136567-56136586 None:intergenic 45.0%
TGACGTGAGTTAACTCATGC+AGG - chr1_4:56136691-56136710 Msa0171410:intron 45.0%
GACGTGAGTTAACTCATGCA+GGG - chr1_4:56136692-56136711 Msa0171410:intron 45.0%
CCTGACTAGTAGTAAGGACT+TGG + chr1_4:56137166-56137185 None:intergenic 45.0%
CCAAGTCCTTACTACTAGTC+AGG - chr1_4:56137163-56137182 Msa0171410:intron 45.0%
TGCTGTCCTGACTAGTAGTA+AGG + chr1_4:56137172-56137191 None:intergenic 45.0%
TTACTACTAGTCAGGACAGC+AGG - chr1_4:56137171-56137190 Msa0171410:intron 45.0%
ATGGTGGCAATACACTCTTC+AGG + chr1_4:56137556-56137575 None:intergenic 45.0%
GAGAATCTGCCAACGTCAAT+AGG + chr1_4:56137595-56137614 None:intergenic 45.0%
GTTGAAACGTTGGCAAGTGA+AGG + chr1_4:56137712-56137731 None:intergenic 45.0%
! AGCGAGATAGAGAGCCTTTT+TGG + chr1_4:56137734-56137753 None:intergenic 45.0%
CGTCCTATCATCATCGATCA+TGG - chr1_4:56137763-56137782 Msa0171410:intron 45.0%
TCTATTATGGGCGGCAAACA+CGG - chr1_4:56138415-56138434 Msa0171410:intron 45.0%
!! GTAGTGATTTGCTTGGCATG+TGG + chr1_4:56138459-56138478 None:intergenic 45.0%
!! GTGGCATGTAGTGATTTGCT+TGG + chr1_4:56138466-56138485 None:intergenic 45.0%
CTTGAGAAAATCTGTCGGGA+AGG + chr1_4:56138565-56138584 None:intergenic 45.0%
GAGGTTGAATATGCCATACC+AGG - chr1_4:56138982-56139001 Msa0171410:intron 45.0%
ACACTGCCCAAAATTGTGCA+AGG - chr1_4:56139275-56139294 Msa0171410:intron 45.0%
!!! AGCTTGTTTTATCCTGGAGG+CGG + chr1_4:56139317-56139336 None:intergenic 45.0%
!!! CTGAGCTTGTTTTATCCTGG+AGG + chr1_4:56139320-56139339 None:intergenic 45.0%
CAAGCTCAGCTACAACTATG+CGG - chr1_4:56139331-56139350 Msa0171410:intron 45.0%
GTCTCAGCACCATAATAGAG+TGG + chr1_4:56139457-56139476 None:intergenic 45.0%
GTGCTGAGACCACTCAAATA+TGG - chr1_4:56139467-56139486 Msa0171410:intron 45.0%
TTGGAACATTGGTGTGAAGG+TGG + chr1_4:56140318-56140337 None:intergenic 45.0%
TCTAAAAGCCCGTGCGTTTA+TGG - chr1_4:56140536-56140555 Msa0171410:intron 45.0%
AAAACCGGGATACACGTGTA+GGG + chr1_4:56140562-56140581 None:intergenic 45.0%
TAAAACCGGGATACACGTGT+AGG + chr1_4:56140563-56140582 None:intergenic 45.0%
! CTAGAGCGTTCGTTAAAACC+GGG + chr1_4:56140576-56140595 None:intergenic 45.0%
! CCTAGAGCGTTCGTTAAAAC+CGG + chr1_4:56140577-56140596 None:intergenic 45.0%
TATTCTGCCCCGAATACCAT+AGG - chr1_4:56140597-56140616 Msa0171410:intron 45.0%
CCTATACGAATGTGGAACAG+AGG + chr1_4:56140629-56140648 None:intergenic 45.0%
CCTCTGTTCCACATTCGTAT+AGG - chr1_4:56140626-56140645 Msa0171410:intron 45.0%
TGAGTGGAGTACATAGCTAC+AGG + chr1_4:56140671-56140690 None:intergenic 45.0%
GACTGGAGATCCCAAGAAAT+AGG + chr1_4:56140818-56140837 None:intergenic 45.0%
GAGAGCTAGCTACTCTCAAA+AGG + chr1_4:56140986-56141005 None:intergenic 45.0%
ACAACGGTTTCACCCACTAA+GGG - chr1_4:56141110-56141129 Msa0171410:intron 45.0%
TAGCATCATTGGCAGTCCTT+AGG + chr1_4:56141538-56141557 None:intergenic 45.0%
AGTTATGAACGGCGGCTAAA+GGG - chr1_4:56142081-56142100 Msa0171410:intron 45.0%
!! CTGGTGAATGAGTATCGAAG+AGG - chr1_4:56142135-56142154 Msa0171410:intron 45.0%
AAGGCTCTCCTTGTAGTCAA+AGG + chr1_4:56142186-56142205 None:intergenic 45.0%
! AAACGGGGTGTTACAACACT+TGG + chr1_4:56142300-56142319 None:intergenic 45.0%
TAGGTGCTCTGATACGTAAC+GGG + chr1_4:56142602-56142621 None:intergenic 45.0%
! TCTTCGTATGGGTAACTTGC+AGG + chr1_4:56142673-56142692 None:intergenic 45.0%
AGAGCAACATTTCCAAGCAG+AGG - chr1_4:56142690-56142709 Msa0171410:intron 45.0%
GAGCAACATTTCCAAGCAGA+GGG - chr1_4:56142691-56142710 Msa0171410:intron 45.0%
AGCAACATTTCCAAGCAGAG+GGG - chr1_4:56142692-56142711 Msa0171410:intron 45.0%
ATTATGCATGTGGTACCACC+AGG - chr1_4:56143309-56143328 Msa0171410:CDS 45.0%
TTATGCATGTGGTACCACCA+GGG - chr1_4:56143310-56143329 Msa0171410:CDS 45.0%
GCATTAAGCCCTCTTCTCTA+AGG - chr1_4:56143332-56143351 Msa0171410:CDS 45.0%
!! CCCCATCTCTAAGGTCATAA+AGG - chr1_4:56143382-56143401 Msa0171410:CDS 45.0%
!! CCCCATCTCTAAGGTCATAA+AGG - chr1_4:56143382-56143401 Msa0171410:CDS 45.0%
TCGTTGCATAGTCAGAGATG+GGG + chr1_4:56143467-56143486 None:intergenic 45.0%
GTCGTTGCATAGTCAGAGAT+GGG + chr1_4:56143468-56143487 None:intergenic 45.0%
TGTCGTTGCATAGTCAGAGA+TGG + chr1_4:56143469-56143488 None:intergenic 45.0%
!! ATCGGTGTGGAATTGGTCTT+AGG + chr1_4:56144293-56144312 None:intergenic 45.0%
!! GGTATTGATCGGTGTGGAAT+TGG + chr1_4:56144300-56144319 None:intergenic 45.0%
GAGGTTAGCACCATGAGATT+AGG + chr1_4:56144372-56144391 None:intergenic 45.0%
! TTAGCTTTCTTACCTCCTCG+AGG - chr1_4:56144737-56144756 Msa0171410:intron 45.0%
GATGTTATAGAACCTCGAGG+AGG + chr1_4:56144752-56144771 None:intergenic 45.0%
CGAGATGTTATAGAACCTCG+AGG + chr1_4:56144755-56144774 None:intergenic 45.0%
! AAGAATAGTGGGGCACTAGT+GGG + chr1_4:56144889-56144908 None:intergenic 45.0%
! AAAGAATAGTGGGGCACTAG+TGG + chr1_4:56144890-56144909 None:intergenic 45.0%
! GGAAAAGATTGCGGCTTTGA+TGG + chr1_4:56145542-56145561 None:intergenic 45.0%
! TTATAGGTTTGGGGCTCTTG+TGG - chr1_4:56145697-56145716 Msa0171410:intron 45.0%
TCCTATAATGTTAGTGCGCC+TGG - chr1_4:56145756-56145775 Msa0171410:intron 45.0%
TTTGCAGCCTACTGTGTTGA+GGG + chr1_4:56145953-56145972 None:intergenic 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG - chr1_4:56139253-56139272 Msa0171410:intron 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG + chr1_4:56146452-56146471 None:intergenic 45.0%
GTTAACCGCATAGTTGTAGC+TGG + chr1_4:56139339-56139358 None:intergenic 45.0%
GTCTCAGCACCATAATAGAG+TGG + chr1_4:56139457-56139476 None:intergenic 45.0%
TTGGAACATTGGTGTGAAGG+TGG + chr1_4:56140318-56140337 None:intergenic 45.0%
AGACGAAGATAAGCAACCTC+GGG + chr1_4:56147764-56147783 None:intergenic 45.0%
CTTATCTTCGTCTTGTGTGG+TGG - chr1_4:56147771-56147790 Msa0171410:intron 45.0%
ACACCAACTGATAACTCCAG+AGG + chr1_4:56147902-56147921 None:intergenic 45.0%
!! GAGTTATCAGTTGGTGTCAG+AGG - chr1_4:56147905-56147924 Msa0171410:intron 45.0%
TGGATCCAAATGTGGAAGGT+AGG - chr1_4:56134812-56134831 Msa0171410:intron 45.0%
ATCGGGGAGTTCTTCAATTC+AGG - chr1_4:56134901-56134920 Msa0171410:intron 45.0%
TTGTGAAGGTCTTGCGTCTT+CGG - chr1_4:56148177-56148196 Msa0171410:intron 45.0%
! GAGCTCGACTCGATAAGAAT+TGG - chr1_4:56148489-56148508 Msa0171410:intron 45.0%
GGTAGAACTTACACTGGCAT+AGG + chr1_4:56148775-56148794 None:intergenic 45.0%
GAAGTGCATCCAGATTCACA+AGG + chr1_4:56148796-56148815 None:intergenic 45.0%
GTTTACAAAACTCCCCGATG+TGG - chr1_4:56148847-56148866 Msa0171410:intron 45.0%
ACTCAAATAGTCCCACATCG+GGG + chr1_4:56148862-56148881 None:intergenic 45.0%
CACTCAAATAGTCCCACATC+GGG + chr1_4:56148863-56148882 None:intergenic 45.0%
GTTCATTGCCAGCCCTAATT+AGG - chr1_4:56149186-56149205 Msa0171410:intron 45.0%
TCATTGCCAGCCCTAATTAG+GGG - chr1_4:56149188-56149207 Msa0171410:intron 45.0%
AAAAGACCCCTAATTAGGGC+TGG + chr1_4:56149197-56149216 None:intergenic 45.0%
GGTCCTAGATAGAGGCAAAT+GGG + chr1_4:56149633-56149652 None:intergenic 45.0%
! CTCTTAGGGTCCGTTTGTTA+TGG - chr1_4:56149986-56150005 Msa0171410:intron 45.0%
! CTTGGCCAAACCTCTTTTGT+TGG + chr1_4:56150658-56150677 None:intergenic 45.0%
CCGTGGATAAAAGCTACCAT+AGG + chr1_4:56150878-56150897 None:intergenic 45.0%
TGAGCAGGGACTAATACTCA+AGG + chr1_4:56151067-56151086 None:intergenic 45.0%
!!! TTGCAGTGCTACTTTTGAGC+AGG - chr1_4:56157511-56157530 Msa0171410:intron 45.0%
CTCAACTTCTTGAAGTGTGG+TGG - chr1_4:56157547-56157566 Msa0171410:intron 45.0%
GTGTGGTGGCTTGATATTAG+TGG - chr1_4:56157561-56157580 Msa0171410:intron 45.0%
GAGTATTTGGGGACAAGCTA+AGG + chr1_4:56157599-56157618 None:intergenic 45.0%
!! GAGTTATCAGTTGGTGTCGA+AGG - chr1_4:56157681-56157700 Msa0171410:intron 45.0%
!! TTATCAGTTGGTGTCGAAGG+TGG - chr1_4:56157684-56157703 Msa0171410:intron 45.0%
TCCAAATGTGGAAGTGGAAG+TGG - chr1_4:56157737-56157756 Msa0171410:intron 45.0%
TCCACTTCCACTTCCACATT+TGG + chr1_4:56157741-56157760 None:intergenic 45.0%
AATGTGGAAGTGGAAGTGGA+AGG - chr1_4:56157741-56157760 Msa0171410:intron 45.0%
TGGGTGGTTGGAGATTGAAA+TGG - chr1_4:56134882-56134901 Msa0171410:intron 45.0%
GGGTGGTTGGAGATTGAAAT+GGG - chr1_4:56134883-56134902 Msa0171410:intron 45.0%
GGTGGTTGGAGATTGAAATG+GGG - chr1_4:56157817-56157836 Msa0171410:intron 45.0%
GTGGTTGGAGATTGAAATGG+GGG - chr1_4:56157818-56157837 Msa0171410:intron 45.0%
GAAATGGGGGAGTTCAATTC+AGG - chr1_4:56157831-56157850 Msa0171410:intron 45.0%
! GAGCTACATCTTTGGAAGAG+TGG - chr1_4:56157888-56157907 Msa0171410:intron 45.0%
!! TAAATAATTATTAAAAGTTA+TGG - chr1_4:56135617-56135636 Msa0171410:intron 5.0%
!!! TAATTATTATTTTTAATTCA+TGG + chr1_4:56140123-56140142 None:intergenic 5.0%
!!! TAATTATTATTTTTAAATCA+TGG + chr1_4:56147252-56147271 None:intergenic 5.0%
!!! TTTTTAAATGATTTTTATTA+GGG + chr1_4:56149731-56149750 None:intergenic 5.0%
!!! TTTTTTAAATGATTTTTATT+AGG + chr1_4:56149732-56149751 None:intergenic 5.0%
!!! ATAAAATATATTTTTTTTAG+AGG + chr1_4:56150208-56150227 None:intergenic 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - chr1_4:56151403-56151422 Msa0171410:intron 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - chr1_4:56151404-56151423 Msa0171410:intron 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - chr1_4:56151403-56151422 Msa0171410:intron 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - chr1_4:56151404-56151423 Msa0171410:intron 5.0%
!!! TATAAGTAAATTTTTTTTAT+AGG - chr1_4:56153286-56153305 Msa0171410:intron 5.0%
!!! ATAAGTAAATTTTTTTTATA+GGG - chr1_4:56153287-56153306 Msa0171410:intron 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - chr1_4:56151403-56151422 Msa0171410:intron 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - chr1_4:56151404-56151423 Msa0171410:intron 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - chr1_4:56151403-56151422 Msa0171410:intron 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - chr1_4:56151404-56151423 Msa0171410:intron 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - chr1_4:56151403-56151422 Msa0171410:intron 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - chr1_4:56151404-56151423 Msa0171410:intron 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - chr1_4:56151403-56151422 Msa0171410:intron 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - chr1_4:56151404-56151423 Msa0171410:intron 5.0%
GCATAGGTCTTCAGCTGCAA+GGG + chr1_4:56134171-56134190 None:intergenic 50.0%
TGCATAGGTCTTCAGCTGCA+AGG + chr1_4:56134172-56134191 None:intergenic 50.0%
GACCTATGCAGTAGCTGACT+AGG - chr1_4:56134182-56134201 Msa0171410:intron 50.0%
GTAAGATGCAGTGCATCTGC+GGG + chr1_4:56134234-56134253 None:intergenic 50.0%
GGTAAGATGCAGTGCATCTG+CGG + chr1_4:56134235-56134254 None:intergenic 50.0%
GTATCTGTCCTTAGCAGCTG+TGG - chr1_4:56134346-56134365 Msa0171410:intron 50.0%
TTCACTAGCCACAGCTGCTA+AGG + chr1_4:56134357-56134376 None:intergenic 50.0%
CAAGAAGCTCAGCGACTTCA+GGG + chr1_4:56134612-56134631 None:intergenic 50.0%
ACAAGAAGCTCAGCGACTTC+AGG + chr1_4:56134613-56134632 None:intergenic 50.0%
TGTTGCCCACCTTCCACATT+TGG + chr1_4:56134820-56134839 None:intergenic 50.0%
ACAGCGCAGTAGGATTGCAA+CGG - chr1_4:56134842-56134861 Msa0171410:intron 50.0%
CAACGTGAGTTAACTCACGC+AGG + chr1_4:56136159-56136178 None:intergenic 50.0%
! TTTTCACACACTGCGTGGCT+AGG + chr1_4:56136581-56136600 None:intergenic 50.0%
AGCGTGAGTTAACTCACGCT+GGG - chr1_4:56136627-56136646 Msa0171410:intron 50.0%
CCAGACATCATCAGAATCGG+CGG + chr1_4:56137644-56137663 None:intergenic 50.0%
CAAGTGAAGGAGACTGTGAG+AGG + chr1_4:56137699-56137718 None:intergenic 50.0%
TCGATCATCACCCCAAGCAA+TGG + chr1_4:56138259-56138278 None:intergenic 50.0%
CACTACATGCCACCTCATGT+CGG - chr1_4:56138473-56138492 Msa0171410:intron 50.0%
ACTACATGCCACCTCATGTC+GGG - chr1_4:56138474-56138493 Msa0171410:intron 50.0%
! GACATTTTCCCGACATGAGG+TGG + chr1_4:56138485-56138504 None:intergenic 50.0%
! CACGACATTTTCCCGACATG+AGG + chr1_4:56138488-56138507 None:intergenic 50.0%
! TACTAGGTTGAGTCACGACC+AGG - chr1_4:56139228-56139247 Msa0171410:intron 50.0%
ACGTCTTAAAGAGAGCGACC+TGG + chr1_4:56139249-56139268 None:intergenic 50.0%
GTGGGGGATTGTTGGAACAT+TGG + chr1_4:56140329-56140348 None:intergenic 50.0%
!! CCGGTTTTAACGAACGCTCT+AGG - chr1_4:56140574-56140593 Msa0171410:intron 50.0%
! AGGCCGGTTCCTATGGTATT+CGG + chr1_4:56140609-56140628 None:intergenic 50.0%
TACGAATGTGGAACAGAGGC+CGG + chr1_4:56140625-56140644 None:intergenic 50.0%
ATGAATCCTGCAGCGACAGA+AGG + chr1_4:56140735-56140754 None:intergenic 50.0%
CTTGGGATCTCCAGTCATGT+AGG - chr1_4:56140822-56140841 Msa0171410:intron 50.0%
GGATCTCCAGTCATGTAGGT+CGG - chr1_4:56140826-56140845 Msa0171410:intron 50.0%
GATCTCCAGTCATGTAGGTC+GGG - chr1_4:56140827-56140846 Msa0171410:intron 50.0%
GATAACCCGACCTACATGAC+TGG + chr1_4:56140835-56140854 None:intergenic 50.0%
AGGATGGGACTAATGCCCAA+AGG + chr1_4:56140869-56140888 None:intergenic 50.0%
GGGCATTAGTCCCATCCTAT+TGG - chr1_4:56140871-56140890 Msa0171410:intron 50.0%
GACAACGGTTTCACCCACTA+AGG - chr1_4:56141109-56141128 Msa0171410:intron 50.0%
GCTAGCTGAGAACCCTTAGT+GGG + chr1_4:56141125-56141144 None:intergenic 50.0%
TGCTAGCTGAGAACCCTTAG+TGG + chr1_4:56141126-56141145 None:intergenic 50.0%
GATGCTCAATGTGCAGTCAC+TGG - chr1_4:56141257-56141276 Msa0171410:intron 50.0%
GAGTTATGAACGGCGGCTAA+AGG - chr1_4:56142080-56142099 Msa0171410:intron 50.0%
AGATTAGATGCAGTCGTGGG+TGG + chr1_4:56142644-56142663 None:intergenic 50.0%
AGAAATCTCACCCCTCTGCT+TGG + chr1_4:56142705-56142724 None:intergenic 50.0%
! GCATTGATCCCCCATCTCTA+AGG - chr1_4:56143373-56143392 Msa0171410:CDS 50.0%
CGTTGCATAGTCAGAGATGG+GGG + chr1_4:56143466-56143485 None:intergenic 50.0%
! TAGTGGGAGCACGACATTAG+CGG + chr1_4:56144873-56144892 None:intergenic 50.0%
GCCAGGCGCACTAACATTAT+AGG + chr1_4:56145760-56145779 None:intergenic 50.0%
TAATGTTAGTGCGCCTGGCT+TGG - chr1_4:56145761-56145780 Msa0171410:intron 50.0%
ATTGTTCCATGCTCCAAGCC+AGG + chr1_4:56145777-56145796 None:intergenic 50.0%
CGACATTCCCTCAACACAGT+AGG - chr1_4:56145943-56145962 Msa0171410:intron 50.0%
GTTTGCAGCCTACTGTGTTG+AGG + chr1_4:56145954-56145973 None:intergenic 50.0%
! TACTAGGTTGAGTCACGACC+AGG - chr1_4:56139228-56139247 Msa0171410:intron 50.0%
ACGTCTTAAAGAGAGCGACC+TGG + chr1_4:56139249-56139268 None:intergenic 50.0%
GCACTGCCCAAAATTGTGCA+AGG - chr1_4:56146404-56146423 Msa0171410:intron 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG + chr1_4:56146446-56146465 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG + chr1_4:56146449-56146468 None:intergenic 50.0%
CAAGCCCAGCTACAACTATG+CGG - chr1_4:56146460-56146479 Msa0171410:intron 50.0%
GACGAAGATAAGCAACCTCG+GGG + chr1_4:56147763-56147782 None:intergenic 50.0%
! TGTGGTGGCGTGATATTCGT+TGG - chr1_4:56147786-56147805 Msa0171410:intron 50.0%
TGCTGCCTACCTTCCACATT+TGG + chr1_4:56147965-56147984 None:intergenic 50.0%
GTCCTAACGTGAGTAGCGAT+GGG - chr1_4:56148008-56148027 Msa0171410:intron 50.0%
TTATCGAGTCGAGCTCAGAC+AGG + chr1_4:56148485-56148504 None:intergenic 50.0%
! ACAGTTTGGCTCAGCTCGTT+AGG - chr1_4:56148587-56148606 Msa0171410:intron 50.0%
GGGTCCTAGATAGAGGCAAA+TGG + chr1_4:56149634-56149653 None:intergenic 50.0%
CACAAACGGGTCCTAGATAG+AGG + chr1_4:56149641-56149660 None:intergenic 50.0%
! CTCTATCTAGGACCCGTTTG+TGG - chr1_4:56149639-56149658 Msa0171410:intron 50.0%
AAGTATGATATGCGTGGCCG+TGG + chr1_4:56150895-56150914 None:intergenic 50.0%
GGAGGGACCAAAAGTGAAGA+CGG + chr1_4:56151853-56151872 None:intergenic 50.0%
GGAGGGACCAAAAGTGAAGA+CGG + chr1_4:56151853-56151872 None:intergenic 50.0%
GGAGGGACCAAAAGTGAAGA+CGG + chr1_4:56151853-56151872 None:intergenic 50.0%
GGAGGGACCAAAAGTGAAGA+CGG + chr1_4:56151853-56151872 None:intergenic 50.0%
GGAGGGACCAAAAGTGAAGA+CGG + chr1_4:56151853-56151872 None:intergenic 50.0%
GGAGGGACCAAAAGTGAAGA+CGG + chr1_4:56151853-56151872 None:intergenic 50.0%
TGGAAGTGGAAGTGGAAGGT+AGG - chr1_4:56157745-56157764 Msa0171410:intron 50.0%
GTCCTAGTGTGAGAAGCGAT+GGG - chr1_4:56157796-56157815 Msa0171410:intron 50.0%
GGTCTTCAGCTGCAAGGGTA+AGG + chr1_4:56134166-56134185 None:intergenic 55.0%
GGCCTAGTCAGCTACTGCAT+AGG + chr1_4:56134187-56134206 None:intergenic 55.0%
GCTGACTAGGCCACTTGCAT+AGG - chr1_4:56134195-56134214 Msa0171410:intron 55.0%
TAGGCCACTTGCATAGGCAC+TGG - chr1_4:56134201-56134220 Msa0171410:intron 55.0%
GTGTCCAGTGCCTATGCAAG+TGG + chr1_4:56134208-56134227 None:intergenic 55.0%
GGGCAACATAACAGCGCAGT+AGG - chr1_4:56134832-56134851 Msa0171410:intron 55.0%
GGCCTAGTGTGAGAAGCGAT+GGG - chr1_4:56134863-56134882 Msa0171410:intron 55.0%
CACCCATCGCTTCTCACACT+AGG + chr1_4:56134868-56134887 None:intergenic 55.0%
CTAGTGTGAGAAGCGATGGG+TGG - chr1_4:56134866-56134885 Msa0171410:intron 55.0%
TGTGAGAAGCGATGGGTGGT+TGG - chr1_4:56134870-56134889 Msa0171410:intron 55.0%
! CAGCGTTTTCACACACTGCG+TGG + chr1_4:56136586-56136605 None:intergenic 55.0%
CACGCAGTGTGTGAAAACGC+TGG - chr1_4:56136584-56136603 Msa0171410:intron 55.0%
CAGCGTGAGTTAACTCACGC+TGG + chr1_4:56136626-56136645 None:intergenic 55.0%
CAGCGTGAGTTAACTCACGC+TGG - chr1_4:56136626-56136645 Msa0171410:intron 55.0%
CTACTAGTCAGGACAGCAGG+TGG - chr1_4:56137174-56137193 Msa0171410:intron 55.0%
! AGTCGTGCGAGAGAGTATGG+TGG + chr1_4:56137572-56137591 None:intergenic 55.0%
AGGAGTCGTGCGAGAGAGTA+TGG + chr1_4:56137575-56137594 None:intergenic 55.0%
CGCACGACTCCTATTGACGT+TGG - chr1_4:56137583-56137602 Msa0171410:intron 55.0%
!! CCGCCGATTCTGATGATGTC+TGG - chr1_4:56137641-56137660 Msa0171410:intron 55.0%
ATTATGGGCGGCAAACACGG+AGG - chr1_4:56138418-56138437 Msa0171410:intron 55.0%
TTATGGGCGGCAAACACGGA+GGG - chr1_4:56138419-56138438 Msa0171410:intron 55.0%
!! GTCGTGAAAGCACTTGTCGC+TGG - chr1_4:56138502-56138521 Msa0171410:intron 55.0%
GTCCACAAATCACGGGGTTG+CGG - chr1_4:56138628-56138647 Msa0171410:intron 55.0%
GGGGTTGCGGCACAAATCAT+GGG - chr1_4:56138641-56138660 Msa0171410:intron 55.0%
GGGTTGCGGCACAAATCATG+GGG - chr1_4:56138642-56138661 Msa0171410:intron 55.0%
CGGCACAAATCATGGGGTTG+TGG - chr1_4:56138648-56138667 Msa0171410:intron 55.0%
! TGAGAGCGCGGCATTCACAA+AGG + chr1_4:56138886-56138905 None:intergenic 55.0%
GTGTAGGGCCATAAACGCAC+GGG + chr1_4:56140547-56140566 None:intergenic 55.0%
CGTGTAGGGCCATAAACGCA+CGG + chr1_4:56140548-56140567 None:intergenic 55.0%
ATGGCCCTACACGTGTATCC+CGG - chr1_4:56140555-56140574 Msa0171410:intron 55.0%
GCCCCGAATACCATAGGAAC+CGG - chr1_4:56140603-56140622 Msa0171410:intron 55.0%
! GCCGGTTCCTATGGTATTCG+GGG + chr1_4:56140607-56140626 None:intergenic 55.0%
! GGCCGGTTCCTATGGTATTC+GGG + chr1_4:56140608-56140627 None:intergenic 55.0%
TCTCATCCTTCTGTCGCTGC+AGG - chr1_4:56140726-56140745 Msa0171410:intron 55.0%
AAGAGGGCTTAATGCCCTGG+TGG + chr1_4:56143327-56143346 None:intergenic 55.0%
GAGAAGAGGGCTTAATGCCC+TGG + chr1_4:56143330-56143349 None:intergenic 55.0%
GCATTGAGCCCCCATCTCTA+AGG - chr1_4:56143414-56143433 Msa0171410:CDS 55.0%
! AGTGGGAGCACGACATTAGC+GGG + chr1_4:56144872-56144891 None:intergenic 55.0%
GAGATGAACCAGAGACCCAC+TGG + chr1_4:56145723-56145742 None:intergenic 55.0%
!! TTGGTGTCAGAGGTAGCCGT+AGG - chr1_4:56147915-56147934 Msa0171410:intron 55.0%
CGTCCTAACGTGAGTAGCGA+TGG - chr1_4:56148007-56148026 Msa0171410:intron 55.0%
CACCCATCGCTACTCACGTT+AGG + chr1_4:56148013-56148032 None:intergenic 55.0%
CTAACGTGAGTAGCGATGGG+TGG - chr1_4:56148011-56148030 Msa0171410:intron 55.0%
!! GGGTGGTGGGAGATTGAGAT+CGG - chr1_4:56148028-56148047 Msa0171410:intron 55.0%
!! GGTGGTGGGAGATTGAGATC+GGG - chr1_4:56148029-56148048 Msa0171410:intron 55.0%
! GTGGTGGGAGATTGAGATCG+GGG - chr1_4:56148030-56148049 Msa0171410:intron 55.0%
TGAAGGTCTTGCGTCTTCGG+TGG - chr1_4:56148180-56148199 Msa0171410:intron 55.0%
AGGCAGCATGACAGAGCAGT+AGG - chr1_4:56157765-56157784 Msa0171410:intron 55.0%
CGTCCTAGTGTGAGAAGCGA+TGG - chr1_4:56157795-56157814 Msa0171410:intron 55.0%
CACCCATCGCTTCTCACACT+AGG + chr1_4:56134868-56134887 None:intergenic 55.0%
CTAGTGTGAGAAGCGATGGG+TGG - chr1_4:56134866-56134885 Msa0171410:intron 55.0%
TGTGAGAAGCGATGGGTGGT+TGG - chr1_4:56134870-56134889 Msa0171410:intron 55.0%
CGGCCTAGTGTGAGAAGCGA+TGG - chr1_4:56134862-56134881 Msa0171410:intron 60.0%
AGGACAGCAGGTGGTCGTTG+AGG - chr1_4:56137183-56137202 Msa0171410:intron 60.0%
TATGGGCGGCAAACACGGAG+GGG - chr1_4:56138420-56138439 Msa0171410:intron 60.0%
TGCCGCAACCCCGTGATTTG+TGG + chr1_4:56138633-56138652 None:intergenic 60.0%
CGGGGTTGCGGCACAAATCA+TGG - chr1_4:56138640-56138659 Msa0171410:intron 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG + chr1_4:56139312-56139331 None:intergenic 60.0%
! GGAACAGAGGCCGGTTCCTA+TGG + chr1_4:56140616-56140635 None:intergenic 60.0%
ATGGGGGATCAATGCCCGAC+AGG + chr1_4:56143368-56143387 None:intergenic 60.0%
! TGGGAGCACGACATTAGCGG+GGG + chr1_4:56144870-56144889 None:intergenic 60.0%
! GTGGGAGCACGACATTAGCG+GGG + chr1_4:56144871-56144890 None:intergenic 60.0%
! TTTGGGGCTCTTGTGGCCAG+TGG - chr1_4:56145704-56145723 Msa0171410:intron 60.0%
TTGGGGCTCTTGTGGCCAGT+GGG - chr1_4:56145705-56145724 Msa0171410:intron 60.0%
TCTTGTGGCCAGTGGGTCTC+TGG - chr1_4:56145712-56145731 Msa0171410:intron 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG + chr1_4:56139312-56139331 None:intergenic 60.0%
ACGTGAGTAGCGATGGGTGG+TGG - chr1_4:56148014-56148033 Msa0171410:intron 60.0%
CGTGAGTAGCGATGGGTGGT+GGG - chr1_4:56148015-56148034 Msa0171410:intron 60.0%
CTATCAACCACGCCGCCTCC+AGG - chr1_4:56139302-56139321 Msa0171410:intron 65.0%
!! AGTGCGCCTGGCTTGGAGCA+TGG - chr1_4:56145768-56145787 Msa0171410:intron 65.0%
CTATCAACCACGCCGCCTCC+AGG - chr1_4:56139302-56139321 Msa0171410:intron 65.0%
TGTGCTGGACAGGTTCCCCG+AGG - chr1_4:56147745-56147764 Msa0171410:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 56133470 56157947 56133470 ID=Msa0171410;Name=Msa0171410
chr1_4 mRNA 56133470 56157947 56133470 ID=Msa0171410-mRNA-1;Parent=Msa0171410;Name=Msa0171410-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|0.87|0.42|0.25|8|0|488
chr1_4 exon 56157943 56157947 56157943 ID=Msa0171410-mRNA-1:exon:16938;Parent=Msa0171410-mRNA-1
chr1_4 exon 56156624 56156811 56156624 ID=Msa0171410-mRNA-1:exon:16937;Parent=Msa0171410-mRNA-1
chr1_4 exon 56156398 56156587 56156398 ID=Msa0171410-mRNA-1:exon:16936;Parent=Msa0171410-mRNA-1
chr1_4 exon 56153625 56153898 56153625 ID=Msa0171410-mRNA-1:exon:16935;Parent=Msa0171410-mRNA-1
chr1_4 exon 56153191 56153222 56153191 ID=Msa0171410-mRNA-1:exon:16934;Parent=Msa0171410-mRNA-1
chr1_4 exon 56143479 56143660 56143479 ID=Msa0171410-mRNA-1:exon:16933;Parent=Msa0171410-mRNA-1
chr1_4 exon 56143262 56143442 56143262 ID=Msa0171410-mRNA-1:exon:16932;Parent=Msa0171410-mRNA-1
chr1_4 exon 56133470 56133884 56133470 ID=Msa0171410-mRNA-1:exon:16931;Parent=Msa0171410-mRNA-1
chr1_4 CDS 56157943 56157947 56157943 ID=Msa0171410-mRNA-1:cds;Parent=Msa0171410-mRNA-1
chr1_4 CDS 56156624 56156811 56156624 ID=Msa0171410-mRNA-1:cds;Parent=Msa0171410-mRNA-1
chr1_4 CDS 56156398 56156587 56156398 ID=Msa0171410-mRNA-1:cds;Parent=Msa0171410-mRNA-1
chr1_4 CDS 56153625 56153898 56153625 ID=Msa0171410-mRNA-1:cds;Parent=Msa0171410-mRNA-1
chr1_4 CDS 56153191 56153222 56153191 ID=Msa0171410-mRNA-1:cds;Parent=Msa0171410-mRNA-1
chr1_4 CDS 56143479 56143660 56143479 ID=Msa0171410-mRNA-1:cds;Parent=Msa0171410-mRNA-1
chr1_4 CDS 56143262 56143442 56143262 ID=Msa0171410-mRNA-1:cds;Parent=Msa0171410-mRNA-1
chr1_4 CDS 56133470 56133884 56133470 ID=Msa0171410-mRNA-1:cds;Parent=Msa0171410-mRNA-1
Gene Sequence

>Msa0171410

ATGCAGTTCCCTGAAGTCGCTGAGCTTCTTGTTGTTTTTTGGCTTCATATTTGTGGGATGATAAACATGCTTGCATTGTCCCGAAACACTCAGTATGCAGCTTATCTTGTGTTCAAGATGATTGATGGCTATGGATTTCAGAATCCAAACTATCCCGTGGTGTTATCAATTTGTGTCGAAGGTGGCCATGATAGTGGGCAACATAACAGCGCAGTAGGATTGCAACGGCCTAGTGTGAGAAGCGATGGGTGGTTGGAGATTGAAATCGGGGAGTTCTTCAATTCAGGCCTAGAAGATGAAGAAGTTCAAATGAATATAAAGGAGATAGATGATTATAATTCGAAGTGTGGTCTCTTTCTTGAAGGAATCGAAGTTAGGCCTAAAAAGAACAAAAGAATGACAAGTTTTGAAGAATTGCCTGAAGAGTGTATTGCCACCATACTCTCTCGCACGACTCCTATTGACGTTGGCAGATTCTCCGTCCTTTCTAAGACTTTTCGATCTGCCGCCGATTCTGATGATGTCTGGAATTGTTTTCTTCCTTCTGACATATCATCTATCCTCTCACAGTCTCCTTCACTTGCCAACGTTTCAACCAAAAAGGCTCTCTATCTCGCTCTCTCTGATCGTCCTATCATCATCGATCATGGTCAAAAGAGCTTTCAATTGGATAGAAAGAGTGGAAAAAAGTTCCCCGAGGTTGCTTATCTTCGTCTTGTGTGGTGGCGTGATATTCGTTGGATGATAAATATGCTTGCCTTGTCTCCAAATACTCAGTATGCGGCTTATCTTGTGTTCAAGATGAATGATGCCCATGGATTTCATAACTATCCTCTGGAGTTATCAGTTGGTGTCAGAGGTAGCCGTAGGAGTAGGCAGCACAACAGAGTAGCAAGATCGCAACGTCCTAACGTGAGTAGCGATGGGTGGTGGGAGATTGAGATCGGGGAGTTCTTCAATTCAGGCCTAGAAGATGAAGTCCAAATGAATGCTAAGGAGACAGATTATTGGAAGAAAGGTCTCTTTGTTGAAGGAATAGAAGTTAGGCTTAAGTTCCCTGAAGTTGCTCAACTTCTTGAAGTGTGGTGGCTTGATATTAGTGGGACGATAAACACCCTTAGCTTGTCCCCAAATACTCAATATGTAGCTTATCTTGTGTTCAAGATGATTGATGCCAAAGGATTTCAGAACTGTCCTATAGAGTTATCAGTTGGTGTCGAAGGTGGCCAGAGTAGTACTAAAATTGTCTGTTTGGATCCAAATGTGGAAGTGGAAGTGGAAGGTAGGCAGCATGACAGAGCAGTAGGATTGCAACGTCCTAGTGTGAGAAGCGATGGGTGGTTGGAGATTGAAATGGGGGAGTTCAATTCAGGCTTAGAAGATGGAGACGTCCTGATGAATGTTAAGGAGCTACATCTTTGGAAGAGTGGTCTCTTTGTTGAAGGAATAGAAGTTAGGCCTAAGTAA
Protein sequence

>Msa0171410

MQFPEVAELLVVFWLHICGMINMLALSRNTQYAAYLVFKMIDGYGFQNPNYPVVLSICVEGGHDSGQHNSAVGLQRPSVRSDGWLEIEIGEFFNSGLEDEEVQMNIKEIDDYNSKCGLFLEGIEVRPKKNKRMTSFEELPEECIATILSRTTPIDVGRFSVLSKTFRSAADSDDVWNCFLPSDISSILSQSPSLANVSTKKALYLALSDRPIIIDHGQKSFQLDRKSGKKFPEVAYLRLVWWRDIRWMINMLALSPNTQYAAYLVFKMNDAHGFHNYPLELSVGVRGSRRSRQHNRVARSQRPNVSSDGWWEIEIGEFFNSGLEDEVQMNAKETDYWKKGLFVEGIEVRLKFPEVAQLLEVWWLDISGTINTLSLSPNTQYVAYLVFKMIDAKGFQNCPIELSVGVEGGQSSTKIVCLDPNVEVEVEGRQHDRAVGLQRPSVRSDGWLEIEMGEFNSGLEDGDVLMNVKELHLWKSGLFVEGIEVRPK*