Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537880 | KEH29195.1 | 85.047 | 107 | 16 | 0 | 1 | 107 | 58 | 164 | 5.21e-58 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537880 | sp|A0AT31|NLTP5_LENCU | 72.973 | 111 | 30 | 0 | 3 | 113 | 4 | 114 | 4.65e-52 | 163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537880 | A0A072UTH7 | 85.047 | 107 | 16 | 0 | 1 | 107 | 58 | 164 | 2.49e-58 | 187 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0537880 | 0.815496 | 8.971790e-52 | -8.615850e-47 |
| Msa0004350 | Msa0537880 | 0.819413 | 1.176781e-52 | -8.615850e-47 |
| Msa0008330 | Msa0537880 | 0.828911 | 6.909857e-55 | -8.615850e-47 |
| Msa0017120 | Msa0537880 | 0.832164 | 1.105256e-55 | -8.615850e-47 |
| Msa0056040 | Msa0537880 | 0.807959 | 3.917540e-50 | -8.615850e-47 |
| Msa0057260 | Msa0537880 | 0.833041 | 6.698383e-56 | -8.615850e-47 |
| Msa0059960 | Msa0537880 | -0.818955 | 1.495880e-52 | -8.615850e-47 |
| Msa0065390 | Msa0537880 | 0.842102 | 3.174315e-58 | -8.615850e-47 |
| Msa0072820 | Msa0537880 | 0.812524 | 4.059812e-51 | -8.615850e-47 |
| Msa0075850 | Msa0537880 | 0.809275 | 2.050325e-50 | -8.615850e-47 |
| Msa0084630 | Msa0537880 | 0.808789 | 2.605741e-50 | -8.615850e-47 |
| Msa0089210 | Msa0537880 | 0.818065 | 2.380874e-52 | -8.615850e-47 |
| Msa0094420 | Msa0537880 | 0.821865 | 3.215959e-53 | -8.615850e-47 |
| Msa0102800 | Msa0537880 | 0.808710 | 2.709897e-50 | -8.615850e-47 |
| Msa0103780 | Msa0537880 | 0.840154 | 1.031738e-57 | -8.615850e-47 |
| Msa0110710 | Msa0537880 | 0.843031 | 1.798432e-58 | -8.615850e-47 |
| Msa0122180 | Msa0537880 | 0.835095 | 2.048510e-56 | -8.615850e-47 |
| Msa0122210 | Msa0537880 | 0.804172 | 2.453963e-49 | -8.615850e-47 |
| Msa0123900 | Msa0537880 | 0.806121 | 9.595370e-50 | -8.615850e-47 |
| Msa0135980 | Msa0537880 | 0.805697 | 1.177831e-49 | -8.615850e-47 |
| Msa0141670 | Msa0537880 | 0.819606 | 1.063187e-52 | -8.615850e-47 |
| Msa0146470 | Msa0537880 | 0.809714 | 1.650577e-50 | -8.615850e-47 |
| Msa0147550 | Msa0537880 | 0.818323 | 2.081409e-52 | -8.615850e-47 |
| Msa0150210 | Msa0537880 | 0.837127 | 6.243799e-57 | -8.615850e-47 |
| Msa0157020 | Msa0537880 | 0.842076 | 3.224496e-58 | -8.615850e-47 |
| Msa0168390 | Msa0537880 | 0.813171 | 2.929930e-51 | -8.615850e-47 |
| Msa0175530 | Msa0537880 | 0.800075 | 1.708682e-48 | -8.615850e-47 |
| Msa0185390 | Msa0537880 | 0.803171 | 3.958936e-49 | -8.615850e-47 |
| Msa0194570 | Msa0537880 | 0.800100 | 1.688652e-48 | -8.615850e-47 |
| Msa0207180 | Msa0537880 | 0.820556 | 6.443289e-53 | -8.615850e-47 |
| Msa0224700 | Msa0537880 | 0.811036 | 8.555762e-51 | -8.615850e-47 |
| Msa0227490 | Msa0537880 | 0.819795 | 9.625752e-53 | -8.615850e-47 |
| Msa0227500 | Msa0537880 | 0.801565 | 8.478317e-49 | -8.615850e-47 |
| Msa0227960 | Msa0537880 | 0.814629 | 1.397891e-51 | -8.615850e-47 |
| Msa0230400 | Msa0537880 | 0.855811 | 4.911815e-62 | -8.615850e-47 |
| Msa0378340 | Msa0537880 | 0.816298 | 5.944335e-52 | -8.615850e-47 |
| Msa0380060 | Msa0537880 | 0.828484 | 8.761818e-55 | -8.615850e-47 |
| Msa0382560 | Msa0537880 | 0.808936 | 2.424522e-50 | -8.615850e-47 |
| Msa0383570 | Msa0537880 | 0.814340 | 1.619482e-51 | -8.615850e-47 |
| Msa0413180 | Msa0537880 | 0.826453 | 2.690189e-54 | -8.615850e-47 |
| Msa0421800 | Msa0537880 | 0.802063 | 6.702087e-49 | -8.615850e-47 |
| Msa0427690 | Msa0537880 | 0.814987 | 1.164565e-51 | -8.615850e-47 |
| Msa0429270 | Msa0537880 | 0.837961 | 3.814787e-57 | -8.615850e-47 |
| Msa0432680 | Msa0537880 | 0.802042 | 6.768346e-49 | -8.615850e-47 |
| Msa0458110 | Msa0537880 | 0.804410 | 2.189402e-49 | -8.615850e-47 |
| Msa0253410 | Msa0537880 | 0.801920 | 7.169006e-49 | -8.615850e-47 |
| Msa0274780 | Msa0537880 | 0.862911 | 3.624162e-64 | -8.615850e-47 |
| Msa0296610 | Msa0537880 | 0.802358 | 5.827469e-49 | -8.615850e-47 |
| Msa0297920 | Msa0537880 | 0.811624 | 6.380195e-51 | -8.615850e-47 |
| Msa0314790 | Msa0537880 | 0.804506 | 2.090947e-49 | -8.615850e-47 |
| Msa0315480 | Msa0537880 | 0.837779 | 4.248783e-57 | -8.615850e-47 |
| Msa0320540 | Msa0537880 | 0.814516 | 1.480488e-51 | -8.615850e-47 |
| Msa0331780 | Msa0537880 | 0.814917 | 1.206940e-51 | -8.615850e-47 |
| Msa0344070 | Msa0537880 | 0.802896 | 4.513108e-49 | -8.615850e-47 |
| Msa0485280 | Msa0537880 | 0.828067 | 1.104752e-54 | -8.615850e-47 |
| Msa0514260 | Msa0537880 | 0.800704 | 1.272160e-48 | -8.615850e-47 |
| Msa0517300 | Msa0537880 | 0.801994 | 6.922243e-49 | -8.615850e-47 |
| Msa0518520 | Msa0537880 | 0.816169 | 6.352783e-52 | -8.615850e-47 |
| Msa0519200 | Msa0537880 | 0.822204 | 2.684145e-53 | -8.615850e-47 |
| Msa0537870 | Msa0537880 | 0.936040 | 3.276799e-97 | -8.615850e-47 |
| Msa0537880 | Msa0538240 | 0.801675 | 8.049559e-49 | -8.615850e-47 |
| Msa0537880 | Msa0538260 | 0.919184 | 6.178644e-87 | -8.615850e-47 |
| Msa0537880 | Msa0538270 | 0.913344 | 6.857765e-84 | -8.615850e-47 |
| Msa0537880 | Msa0538570 | 0.871514 | 6.448074e-67 | -8.615850e-47 |
| Msa0537880 | Msa0550110 | 0.800043 | 1.734050e-48 | -8.615850e-47 |
| Msa0537880 | Msa0553520 | 0.804006 | 2.657116e-49 | -8.615850e-47 |
| Msa0537880 | Msa0560200 | 0.821207 | 4.564223e-53 | -8.615850e-47 |
| Msa0537880 | Msa0561510 | 0.820798 | 5.669879e-53 | -8.615850e-47 |
| Msa0537880 | Msa0567290 | 0.804802 | 1.813847e-49 | -8.615850e-47 |
| Msa0537880 | Msa0575250 | 0.803427 | 3.504740e-49 | -8.615850e-47 |
| Msa0537880 | Msa0576420 | 0.805123 | 1.554178e-49 | -8.615850e-47 |
| Msa0537880 | Msa0581340 | 0.823288 | 1.501874e-53 | -8.615850e-47 |
| Msa0537880 | Msa0594150 | 0.842206 | 2.978155e-58 | -8.615850e-47 |
| Msa0537880 | Msa0594180 | 0.849893 | 2.413053e-60 | -8.615850e-47 |
| Msa0537880 | Msa0594390 | 0.867830 | 1.024682e-65 | -8.615850e-47 |
| Msa0537880 | Msa0595780 | 0.812816 | 3.504156e-51 | -8.615850e-47 |
| Msa0537880 | Msa0600390 | 0.845589 | 3.696930e-59 | -8.615850e-47 |
| Msa0537880 | Msa0606060 | 0.800153 | 1.647046e-48 | -8.615850e-47 |
| Msa0537880 | Msa0607280 | 0.827271 | 1.715554e-54 | -8.615850e-47 |
| Msa0537880 | Msa0614230 | 0.830445 | 2.925031e-55 | -8.615850e-47 |
| Msa0537880 | Msa0617120 | 0.802268 | 6.080677e-49 | -8.615850e-47 |
| Msa0537880 | Msa0619330 | 0.805831 | 1.103934e-49 | -8.615850e-47 |
| Msa0537880 | Msa0622390 | 0.809404 | 1.923922e-50 | -8.615850e-47 |
| Msa0537880 | Msa0624220 | 0.800688 | 1.281744e-48 | -8.615850e-47 |
| Msa0537880 | Msa0624240 | 0.800459 | 1.426938e-48 | -8.615850e-47 |
| Msa0537880 | Msa0633860 | 0.996214 | 9.371571e-225 | -8.615850e-47 |
| Msa0537880 | Msa0634270 | 0.871159 | 8.448702e-67 | -8.615850e-47 |
| Msa0537880 | Msa0634420 | 0.914431 | 1.932286e-84 | -8.615850e-47 |
| Msa0537880 | Msa0638710 | 0.836533 | 8.851874e-57 | -8.615850e-47 |
| Msa0537880 | Msa0640880 | 0.853655 | 2.069519e-61 | -8.615850e-47 |
| Msa0537880 | Msa0660820 | 0.835318 | 1.799281e-56 | -8.615850e-47 |
| Msa0537880 | Msa0663650 | 0.808192 | 3.494812e-50 | -8.615850e-47 |
| Msa0537880 | Msa0681890 | 0.800288 | 1.546578e-48 | -8.615850e-47 |
| Msa0537880 | Msa0698600 | 0.800465 | 1.423144e-48 | -8.615850e-47 |
| Msa0537880 | Msa0702070 | 0.840891 | 6.618322e-58 | -8.615850e-47 |
| Msa0537880 | Msa0702120 | 0.833074 | 6.569838e-56 | -8.615850e-47 |
| Msa0537880 | Msa0703720 | 0.809696 | 1.665672e-50 | -8.615850e-47 |
| Msa0537880 | Msa0703760 | 0.812544 | 4.020153e-51 | -8.615850e-47 |
| Msa0537880 | Msa0704570 | 0.801016 | 1.098465e-48 | -8.615850e-47 |
| Msa0537880 | Msa0705550 | 0.801078 | 1.066635e-48 | -8.615850e-47 |
| Msa0537880 | Msa0706380 | 0.803750 | 3.003493e-49 | -8.615850e-47 |
| Msa0537880 | Msa0706410 | 0.802580 | 5.245365e-49 | -8.615850e-47 |
| Msa0537880 | Msa0709480 | 0.808491 | 3.017443e-50 | -8.615850e-47 |
| Msa0537880 | Msa0719340 | 0.812739 | 3.643024e-51 | -8.615850e-47 |
| Msa0537880 | Msa0720270 | 0.828199 | 1.026778e-54 | -8.615850e-47 |
| Msa0537880 | Msa0722940 | 0.802404 | 5.701361e-49 | -8.615850e-47 |
| Msa0537880 | Msa0723150 | 0.817424 | 3.321709e-52 | -8.615850e-47 |
| Msa0537880 | Msa0738870 | 0.821451 | 4.010683e-53 | -8.615850e-47 |
| Msa0537880 | Msa0738970 | 0.814674 | 1.366018e-51 | -8.615850e-47 |
| Msa0537880 | Msa0740420 | 0.810259 | 1.259599e-50 | -8.615850e-47 |
| Msa0537880 | Msa0772150 | 0.810951 | 8.929408e-51 | -8.615850e-47 |
| Msa0537880 | Msa0803130 | 0.809935 | 1.479295e-50 | -8.615850e-47 |
| Msa0537880 | Msa0819320 | 0.800208 | 1.605357e-48 | -8.615850e-47 |
| Msa0537880 | Msa0819330 | 0.807874 | 4.084226e-50 | -8.615850e-47 |
| Msa0537880 | Msa0819370 | 0.800565 | 1.357987e-48 | -8.615850e-47 |
| Msa0537880 | Msa0820670 | 0.814080 | 1.848141e-51 | -8.615850e-47 |
| Msa0537880 | Msa0838660 | 0.840596 | 7.903999e-58 | -8.615850e-47 |
| Msa0537880 | Msa0841490 | 0.805701 | 1.175747e-49 | -8.615850e-47 |
| Msa0537880 | Msa0843290 | 0.802810 | 4.702460e-49 | -8.615850e-47 |
| Msa0537880 | Msa0859390 | 0.818510 | 1.888318e-52 | -8.615850e-47 |
| Msa0537880 | Msa0859520 | 0.802143 | 6.451980e-49 | -8.615850e-47 |
| Msa0537880 | Msa0882700 | 0.800657 | 1.300697e-48 | -8.615850e-47 |
| Msa0537880 | Msa0930330 | 0.812860 | 3.426794e-51 | -8.615850e-47 |
| Msa0537880 | Msa0931480 | 0.876153 | 1.750635e-68 | -8.615850e-47 |
| Msa0537880 | Msa0931610 | 0.807842 | 4.148306e-50 | -8.615850e-47 |
| Msa0537880 | Msa0955310 | 0.827158 | 1.825730e-54 | -8.615850e-47 |
| Msa0537880 | Msa1002040 | 0.801618 | 8.271863e-49 | -8.615850e-47 |
| Msa0537880 | Msa1004500 | 0.829502 | 4.966706e-55 | -8.615850e-47 |
| Msa0537880 | Msa1004520 | 0.803364 | 3.610653e-49 | -8.615850e-47 |
| Msa0537880 | Msa1022310 | 0.824417 | 8.165295e-54 | -8.615850e-47 |
| Msa0537880 | Msa1027790 | 0.820910 | 5.343856e-53 | -8.615850e-47 |
| Msa0537880 | Msa1035090 | 0.801176 | 1.018649e-48 | -8.615850e-47 |
| Msa0537880 | Msa1044040 | 0.812134 | 4.938215e-51 | -8.615850e-47 |
| Msa0537880 | Msa1046870 | 0.817278 | 3.583041e-52 | -8.615850e-47 |
| Msa0537880 | Msa1061180 | 0.827551 | 1.469839e-54 | -8.615850e-47 |
| Msa0537880 | Msa1070900 | 0.803707 | 3.065156e-49 | -8.615850e-47 |
| Msa0537880 | Msa1103620 | 0.807927 | 3.979148e-50 | -8.615850e-47 |
| Msa0537880 | Msa1106560 | 0.818506 | 1.891549e-52 | -8.615850e-47 |
| Msa0537880 | Msa1106580 | 0.814280 | 1.669363e-51 | -8.615850e-47 |
| Msa0537880 | Msa1112610 | 0.816084 | 6.636057e-52 | -8.615850e-47 |
| Msa0537880 | Msa1116010 | 0.853312 | 2.596949e-61 | -8.615850e-47 |
| Msa0537880 | Msa1125780 | 0.805582 | 1.245025e-49 | -8.615850e-47 |
| Msa0537880 | Msa1125950 | 0.806783 | 6.955290e-50 | -8.615850e-47 |
| Msa0537880 | Msa1134400 | 0.836149 | 1.108420e-56 | -8.615850e-47 |
| Msa0537880 | Msa1162470 | 0.815090 | 1.104899e-51 | -8.615850e-47 |
| Msa0537880 | Msa1171340 | 0.813418 | 2.585602e-51 | -8.615850e-47 |
| Msa0537880 | Msa1180410 | 0.815328 | 9.780540e-52 | -8.615850e-47 |
| Msa0537880 | Msa1198450 | 0.800375 | 1.484377e-48 | -8.615850e-47 |
| Msa0537880 | Msa1199210 | 0.801977 | 6.978512e-49 | -8.615850e-47 |
| Msa0537880 | Msa1200920 | 0.821613 | 3.679448e-53 | -8.615850e-47 |
| Msa0537880 | Msa1208510 | 0.862603 | 4.507759e-64 | -8.615850e-47 |
| Msa0537880 | Msa1214400 | 0.802802 | 4.719914e-49 | -8.615850e-47 |
| Msa0537880 | Msa1219250 | 0.819372 | 1.202500e-52 | -8.615850e-47 |
| Msa0537880 | Msa1220450 | -0.806899 | 6.573906e-50 | -8.615850e-47 |
| Msa0537880 | Msa1220460 | -0.804511 | 2.085649e-49 | -8.615850e-47 |
| Msa0537880 | Msa1220480 | -0.803043 | 4.207700e-49 | -8.615850e-47 |
| Msa0537880 | Msa1220740 | 0.833403 | 5.442328e-56 | -8.615850e-47 |
| Msa0537880 | Msa1221260 | 0.826105 | 3.255422e-54 | -8.615850e-47 |
| Msa0537880 | Msa1226360 | 0.808865 | 2.510104e-50 | -8.615850e-47 |
| Msa0537880 | Msa1229640 | 0.847992 | 8.140469e-60 | -8.615850e-47 |
| Msa0537880 | Msa1232010 | 0.816884 | 4.392306e-52 | -8.615850e-47 |
| Msa0537880 | Msa1232860 | 0.824793 | 6.656278e-54 | -8.615850e-47 |
| Msa0537880 | Msa1237750 | 0.809171 | 2.158692e-50 | -8.615850e-47 |
| Msa0537880 | Msa1238730 | 0.807783 | 4.269656e-50 | -8.615850e-47 |
| Msa0537880 | Msa1254210 | 0.822435 | 2.372263e-53 | -8.615850e-47 |
| Msa0537880 | Msa1254770 | 0.805319 | 1.414036e-49 | -8.615850e-47 |
| Msa0537880 | Msa1254800 | 0.808110 | 3.638077e-50 | -8.615850e-47 |
| Msa0537880 | Msa1258810 | 0.859563 | 3.792649e-63 | -8.615850e-47 |
| Msa0537880 | Msa1263590 | 0.827192 | 1.792051e-54 | -8.615850e-47 |
| Msa0537880 | Msa1263670 | 0.829123 | 6.137238e-55 | -8.615850e-47 |
| Msa0537880 | Msa1272340 | 0.839057 | 1.989344e-57 | -8.615850e-47 |
| Msa0537880 | Msa1274740 | 0.814141 | 1.792067e-51 | -8.615850e-47 |
| Msa0537880 | Msa1275290 | 0.817248 | 3.638530e-52 | -8.615850e-47 |
| Msa0537880 | Msa1284030 | 0.845138 | 4.896247e-59 | -8.615850e-47 |
| Msa0537880 | Msa1293530 | 0.810905 | 9.133740e-51 | -8.615850e-47 |
| Msa0537880 | Msa1302150 | 0.829626 | 4.632550e-55 | -8.615850e-47 |
| Msa0537880 | Msa1309100 | 0.803831 | 2.888713e-49 | -8.615850e-47 |
| Msa0537880 | Msa1310250 | 0.833673 | 4.659664e-56 | -8.615850e-47 |
| Msa0537880 | Msa1312730 | 0.823555 | 1.300475e-53 | -8.615850e-47 |
| Msa0537880 | Msa1315980 | 0.810887 | 9.219579e-51 | -8.615850e-47 |
| Msa0537880 | Msa1323060 | 0.835243 | 1.879646e-56 | -8.615850e-47 |
| Msa0537880 | Msa1325650 | 0.815569 | 8.643571e-52 | -8.615850e-47 |
| Msa0537880 | Msa1330240 | 0.871041 | 9.245789e-67 | -8.615850e-47 |
| Msa0537880 | Msa1334650 | 0.826836 | 2.179467e-54 | -8.615850e-47 |
| Msa0537880 | Msa1347030 | 0.928834 | 1.645728e-92 | -8.615850e-47 |
| Msa0537880 | Msa1349360 | 0.802037 | 6.784355e-49 | -8.615850e-47 |
| Msa0537880 | Msa1354040 | 0.833903 | 4.082583e-56 | -8.615850e-47 |
| Msa0537880 | Msa1365210 | 0.824368 | 8.382006e-54 | -8.615850e-47 |
| Msa0537880 | Msa1369860 | 0.860790 | 1.615987e-63 | -8.615850e-47 |
| Msa0537880 | Msa1381130 | 0.802109 | 6.555840e-49 | -8.615850e-47 |
| Msa0537880 | Msa1382720 | 0.810167 | 1.318515e-50 | -8.615850e-47 |
| Msa0537880 | Msa1388610 | 0.814276 | 1.672945e-51 | -8.615850e-47 |
| Msa0537880 | Msa1392680 | 0.815439 | 9.240732e-52 | -8.615850e-47 |
| Msa0537880 | Msa1405770 | 0.831482 | 1.627898e-55 | -8.615850e-47 |
| Msa0537880 | Msa1426870 | 0.817448 | 3.280539e-52 | -8.615850e-47 |
| Msa0537880 | Msa1429830 | 0.805457 | 1.322803e-49 | -8.615850e-47 |
| Msa0537880 | Msa1437150 | 0.813678 | 2.267003e-51 | -8.615850e-47 |
| Msa0537880 | Msa1439800 | 0.800798 | 1.217144e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537880 | MtrunA17_Chr4g0012951 | 85.047 | 107 | 16 | 0 | 1 | 107 | 1 | 107 | 1.39e-61 | 184 |
| Msa0537880 | MtrunA17_Chr4g0012991 | 85.047 | 107 | 16 | 0 | 1 | 107 | 56 | 162 | 5.14e-60 | 182 |
| Msa0537880 | MtrunA17_Chr4g0013001 | 84.112 | 107 | 17 | 0 | 1 | 107 | 1 | 107 | 1.09e-59 | 179 |
| Msa0537880 | MtrunA17_Chr4g0012961 | 83.178 | 107 | 18 | 0 | 1 | 107 | 1 | 107 | 3.52e-59 | 178 |
| Msa0537880 | MtrunA17_Chr4g0013261 | 62.281 | 114 | 40 | 2 | 1 | 112 | 1 | 113 | 6.15e-42 | 134 |
| Msa0537880 | MtrunA17_Chr4g0013251 | 62.281 | 114 | 40 | 2 | 1 | 112 | 1 | 113 | 5.60e-41 | 132 |
| Msa0537880 | MtrunA17_Chr4g0012901 | 48.598 | 107 | 53 | 2 | 1 | 105 | 5 | 111 | 5.19e-29 | 102 |
| Msa0537880 | MtrunA17_Chr4g0013211 | 44.545 | 110 | 61 | 0 | 1 | 110 | 1 | 110 | 1.72e-27 | 98.2 |
| Msa0537880 | MtrunA17_Chr7g0244691 | 45.045 | 111 | 58 | 2 | 4 | 112 | 7 | 116 | 5.63e-27 | 97.1 |
| Msa0537880 | MtrunA17_Chr7g0244831 | 44.348 | 115 | 59 | 4 | 2 | 112 | 3 | 116 | 2.92e-25 | 92.4 |
| Msa0537880 | MtrunA17_Chr4g0012891 | 42.609 | 115 | 59 | 3 | 5 | 112 | 9 | 123 | 9.15e-25 | 91.7 |
| Msa0537880 | MtrunA17_Chr7g0244641 | 40.367 | 109 | 63 | 2 | 4 | 110 | 7 | 115 | 1.40e-24 | 90.9 |
| Msa0537880 | MtrunA17_Chr7g0244671 | 38.739 | 111 | 66 | 1 | 4 | 112 | 7 | 117 | 1.41e-24 | 91.7 |
| Msa0537880 | MtrunA17_Chr7g0244841 | 42.342 | 111 | 60 | 3 | 4 | 112 | 7 | 115 | 2.12e-24 | 90.5 |
| Msa0537880 | MtrunA17_Chr2g0309241 | 42.991 | 107 | 59 | 2 | 1 | 106 | 1 | 106 | 1.07e-22 | 85.9 |
| Msa0537880 | MtrunA17_Chr4g0012931 | 39.823 | 113 | 65 | 1 | 1 | 110 | 1 | 113 | 5.14e-22 | 84.7 |
| Msa0537880 | MtrunA17_Chr7g0244811 | 38.835 | 103 | 61 | 1 | 1 | 101 | 5 | 107 | 9.72e-21 | 81.3 |
| Msa0537880 | MtrunA17_Chr7g0244741 | 40.179 | 112 | 64 | 1 | 4 | 112 | 7 | 118 | 6.33e-19 | 76.6 |
| Msa0537880 | MtrunA17_Chr4g0012921 | 39.823 | 113 | 65 | 2 | 1 | 110 | 1 | 113 | 1.59e-18 | 75.5 |
| Msa0537880 | MtrunA17_Chr7g0244681 | 40.367 | 109 | 62 | 2 | 4 | 110 | 7 | 114 | 3.05e-18 | 74.7 |
| Msa0537880 | MtrunA17_Chr3g0107481 | 35.780 | 109 | 69 | 1 | 5 | 112 | 3 | 111 | 3.34e-16 | 69.3 |
| Msa0537880 | MtrunA17_Chr7g0233431 | 30.841 | 107 | 73 | 1 | 5 | 110 | 20 | 126 | 8.41e-16 | 68.6 |
| Msa0537880 | MtrunA17_Chr7g0244721 | 36.364 | 110 | 66 | 3 | 4 | 110 | 7 | 115 | 1.58e-15 | 67.8 |
| Msa0537880 | MtrunA17_Chr7g0244821 | 37.615 | 109 | 64 | 4 | 4 | 110 | 7 | 113 | 1.75e-15 | 67.8 |
| Msa0537880 | MtrunA17_Chr7g0244761 | 37.615 | 109 | 65 | 3 | 4 | 110 | 32 | 139 | 2.14e-15 | 67.8 |
| Msa0537880 | MtrunA17_Chr7g0244791 | 36.036 | 111 | 64 | 2 | 4 | 110 | 12 | 119 | 8.27e-15 | 65.9 |
| Msa0537880 | MtrunA17_Chr1g0165761 | 40.741 | 108 | 61 | 2 | 5 | 110 | 8 | 114 | 1.00e-14 | 65.5 |
| Msa0537880 | MtrunA17_Chr3g0105001 | 36.111 | 108 | 61 | 4 | 4 | 104 | 7 | 113 | 2.85e-14 | 64.3 |
| Msa0537880 | MtrunA17_Chr3g0104971 | 36.111 | 108 | 61 | 4 | 4 | 104 | 7 | 113 | 5.99e-14 | 63.5 |
| Msa0537880 | MtrunA17_Chr3g0104981 | 36.111 | 108 | 61 | 4 | 4 | 104 | 7 | 113 | 6.25e-14 | 63.5 |
| Msa0537880 | MtrunA17_Chr3g0105021 | 37.864 | 103 | 56 | 4 | 9 | 104 | 12 | 113 | 6.67e-14 | 63.5 |
| Msa0537880 | MtrunA17_Chr3g0105011 | 37.864 | 103 | 56 | 4 | 9 | 104 | 12 | 113 | 6.67e-14 | 63.5 |
| Msa0537880 | MtrunA17_Chr7g0244661 | 38.889 | 108 | 58 | 3 | 4 | 109 | 7 | 108 | 1.62e-13 | 62.4 |
| Msa0537880 | MtrunA17_Chr3g0104991 | 37.864 | 103 | 56 | 4 | 9 | 104 | 12 | 113 | 1.73e-13 | 62.4 |
| Msa0537880 | MtrunA17_Chr3g0104951 | 35.185 | 108 | 62 | 4 | 4 | 104 | 7 | 113 | 1.79e-13 | 62.4 |
| Msa0537880 | MtrunA17_Chr3g0104931 | 35.185 | 108 | 62 | 4 | 4 | 104 | 7 | 113 | 1.79e-13 | 62.4 |
| Msa0537880 | MtrunA17_Chr3g0104941 | 35.185 | 108 | 62 | 4 | 4 | 104 | 7 | 113 | 1.79e-13 | 62.4 |
| Msa0537880 | MtrunA17_Chr3g0104921 | 36.893 | 103 | 57 | 4 | 9 | 104 | 2 | 103 | 2.59e-13 | 61.6 |
| Msa0537880 | MtrunA17_Chr3g0104911 | 36.893 | 103 | 57 | 4 | 9 | 104 | 2 | 103 | 2.59e-13 | 61.6 |
| Msa0537880 | MtrunA17_Chr3g0105031 | 37.143 | 105 | 58 | 4 | 9 | 106 | 2 | 105 | 2.69e-13 | 61.6 |
| Msa0537880 | MtrunA17_Chr3g0104901 | 35.088 | 114 | 63 | 5 | 1 | 104 | 1 | 113 | 3.15e-13 | 61.6 |
| Msa0537880 | MtrunA17_Chr3g0095991 | 34.906 | 106 | 63 | 4 | 3 | 104 | 10 | 113 | 5.48e-13 | 61.2 |
| Msa0537880 | MtrunA17_Chr3g0105041 | 35.185 | 108 | 62 | 4 | 4 | 104 | 7 | 113 | 6.11e-13 | 61.2 |
| Msa0537880 | MtrunA17_Chr7g0244751 | 33.636 | 110 | 72 | 1 | 4 | 112 | 7 | 116 | 6.64e-13 | 60.8 |
| Msa0537880 | MtrunA17_Chr3g0104961 | 35.185 | 108 | 62 | 4 | 4 | 104 | 7 | 113 | 1.19e-12 | 60.5 |
| Msa0537880 | MtrunA17_Chr3g0095931 | 31.683 | 101 | 63 | 3 | 10 | 105 | 13 | 112 | 1.56e-12 | 59.7 |
| Msa0537880 | MtrunA17_Chr3g0101431 | 35.922 | 103 | 58 | 4 | 9 | 104 | 11 | 112 | 2.35e-12 | 59.7 |
| Msa0537880 | MtrunA17_Chr3g0095951 | 32.407 | 108 | 65 | 4 | 4 | 104 | 7 | 113 | 5.12e-12 | 58.5 |
| Msa0537880 | MtrunA17_Chr3g0096021 | 32.407 | 108 | 65 | 4 | 4 | 104 | 7 | 113 | 5.88e-12 | 58.5 |
| Msa0537880 | MtrunA17_Chr3g0096031 | 32.407 | 108 | 65 | 4 | 4 | 104 | 7 | 113 | 1.01e-11 | 57.8 |
| Msa0537880 | MtrunA17_Chr3g0094521 | 30.189 | 106 | 68 | 4 | 10 | 112 | 18 | 120 | 2.42e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537880 | AT5G59320.1 | 59.596 | 99 | 38 | 1 | 8 | 106 | 10 | 106 | 4.36e-35 | 117 |
| Msa0537880 | AT2G38540.1 | 61.111 | 108 | 36 | 6 | 4 | 107 | 5 | 110 | 5.39e-32 | 110 |
| Msa0537880 | AT5G59310.1 | 56.000 | 100 | 39 | 2 | 8 | 107 | 10 | 104 | 7.64e-31 | 107 |
| Msa0537880 | AT2G38530.1 | 58.036 | 112 | 43 | 4 | 4 | 112 | 5 | 115 | 1.76e-29 | 103 |
| Msa0537880 | AT3G51600.1 | 52.336 | 107 | 47 | 4 | 4 | 107 | 5 | 110 | 1.50e-25 | 93.6 |
| Msa0537880 | AT2G15050.3 | 47.115 | 104 | 51 | 3 | 4 | 103 | 5 | 108 | 1.93e-25 | 93.6 |
| Msa0537880 | AT2G15050.2 | 47.115 | 104 | 51 | 3 | 4 | 103 | 5 | 108 | 1.97e-25 | 93.2 |
| Msa0537880 | AT2G15050.1 | 47.115 | 104 | 51 | 3 | 4 | 103 | 5 | 108 | 2.51e-25 | 93.2 |
| Msa0537880 | AT3G51590.1 | 45.098 | 102 | 53 | 3 | 6 | 106 | 8 | 107 | 1.82e-24 | 90.9 |
| Msa0537880 | AT4G33355.1 | 53.846 | 78 | 36 | 0 | 24 | 101 | 28 | 105 | 6.05e-22 | 84.3 |
| Msa0537880 | AT4G33355.2 | 53.846 | 78 | 36 | 0 | 24 | 101 | 28 | 105 | 6.26e-22 | 84.3 |
| Msa0537880 | AT5G01870.1 | 44.231 | 104 | 50 | 4 | 9 | 105 | 4 | 106 | 2.55e-21 | 82.8 |
| Msa0537880 | AT3G08770.1 | 45.455 | 88 | 44 | 3 | 22 | 106 | 18 | 104 | 9.34e-18 | 73.6 |
| Msa0537880 | AT3G08770.2 | 45.455 | 88 | 44 | 3 | 22 | 106 | 18 | 104 | 1.11e-17 | 73.6 |
| Msa0537880 | AT2G18370.1 | 40.449 | 89 | 51 | 2 | 15 | 102 | 16 | 103 | 3.05e-16 | 69.7 |
Find 46 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTACTTAGTGAAATATTT+TGG | 0.134106 | 4_1:+16938572 | Msa0537880:three_prime_UTR |
| AGTGCTGCTGGTGCTATTTC+TGG | 0.136175 | 4_1:+16937818 | Msa0537880:CDS |
| TTATTCTTAATAGCATTAAA+TGG | 0.274471 | 4_1:-16938455 | None:intergenic |
| CCATGCATTGCATATCTTAG+AGG | 0.320070 | 4_1:+16937695 | Msa0537880:CDS |
| GTTGCAGCTCCAAAGTTATA+TGG | 0.346531 | 4_1:+16938406 | Msa0537880:CDS |
| AATGTTAACACCGCATTTGC+CGG | 0.346833 | 4_1:-16937870 | None:intergenic |
| CTTCTTATACCAGACTGTAT+TGG | 0.369553 | 4_1:+16938519 | Msa0537880:three_prime_UTR |
| CCATCTCCAGCATGCTGTGC+TGG | 0.375274 | 4_1:+16937728 | Msa0537880:CDS |
| AACACAGCTGCTGGTCTTCC+CGG | 0.392611 | 4_1:+16937851 | Msa0537880:CDS |
| TTGCAAGCAGCCTGACGGTC+AGG | 0.421711 | 4_1:-16937785 | None:intergenic |
| ATCTCATGTGGAACAGTAAC+TGG | 0.426922 | 4_1:+16937662 | Msa0537880:CDS |
| GAGAAGTTTCCATATAACTT+TGG | 0.427067 | 4_1:-16938415 | None:intergenic |
| GGTAGAGGTACTGATCTTGT+AGG | 0.430936 | 4_1:-16937894 | None:intergenic |
| AAGTCAAAGGAAATAAAGTT+GGG | 0.431539 | 4_1:+16938719 | Msa0537880:three_prime_UTR |
| TAAGTCAAAGGAAATAAAGT+TGG | 0.441141 | 4_1:+16938718 | Msa0537880:three_prime_UTR |
| CACCACCACGCCTGACCGTC+AGG | 0.443141 | 4_1:+16937775 | Msa0537880:CDS |
| ACGGTCAGGCGTGGTGGTGG+CGG | 0.445777 | 4_1:-16937771 | None:intergenic |
| GTCAGGCGTGGTGGTGGCGG+CGG | 0.446691 | 4_1:-16937768 | None:intergenic |
| CAGTCTGGTATAAGAAGGAT+AGG | 0.473305 | 4_1:-16938513 | None:intergenic |
| TTCACTCCAGCACAGCATGC+TGG | 0.485039 | 4_1:-16937734 | None:intergenic |
| AACTGCTTGAAAAGTGCTGC+TGG | 0.486030 | 4_1:+16937806 | Msa0537880:CDS |
| ATGTTAACACCGCATTTGCC+GGG | 0.493990 | 4_1:-16937869 | None:intergenic |
| GCATATCTTAGAGGTGGTGC+TGG | 0.504129 | 4_1:+16937704 | Msa0537880:CDS |
| CTGACGGTCAGGCGTGGTGG+TGG | 0.517462 | 4_1:-16937774 | None:intergenic |
| AAGAATAATAATGAGACTGA+TGG | 0.524929 | 4_1:+16938470 | Msa0537880:three_prime_UTR |
| GTGCATGATCGTTGCACCTA+TGG | 0.527274 | 4_1:+16937628 | Msa0537880:CDS |
| CAATACAGTCTGGTATAAGA+AGG | 0.533082 | 4_1:-16938518 | None:intergenic |
| CCAGCACAGCATGCTGGAGA+TGG | 0.550113 | 4_1:-16937728 | None:intergenic |
| TTGAATGCTAACACAGCTGC+TGG | 0.551046 | 4_1:+16937842 | Msa0537880:CDS |
| TCTATCTACTAATAAGTCAA+AGG | 0.554766 | 4_1:+16938706 | Msa0537880:three_prime_UTR |
| GTAGAGGTACTGATCTTGTA+GGG | 0.565695 | 4_1:-16937893 | None:intergenic |
| AGCAGCCTGACGGTCAGGCG+TGG | 0.565783 | 4_1:-16937780 | None:intergenic |
| TAAGACAATCCAATACAGTC+TGG | 0.567330 | 4_1:-16938528 | None:intergenic |
| TGGTTATATTTACAGCATCA+GGG | 0.568642 | 4_1:+16938371 | Msa0537880:intron |
| AGCCTGACGGTCAGGCGTGG+TGG | 0.576862 | 4_1:-16937777 | None:intergenic |
| GAGATTGCAGCATCTGCCAT+AGG | 0.577723 | 4_1:-16937644 | None:intergenic |
| CCTCTAAGATATGCAATGCA+TGG | 0.588805 | 4_1:-16937695 | None:intergenic |
| GCTGGTCTTCCCGGCAAATG+CGG | 0.592170 | 4_1:+16937860 | Msa0537880:CDS |
| TGCATTGCATATCTTAGAGG+TGG | 0.623803 | 4_1:+16937698 | Msa0537880:CDS |
| AGCAGTTGCAAGCAGCCTGA+CGG | 0.624471 | 4_1:-16937790 | None:intergenic |
| AATAATAATGAGACTGATGG+AGG | 0.629956 | 4_1:+16938473 | Msa0537880:three_prime_UTR |
| ATGGAGGCTCATCTTATGCG+TGG | 0.640602 | 4_1:+16938489 | Msa0537880:three_prime_UTR |
| AGTCTGGTATAAGAAGGATA+GGG | 0.652754 | 4_1:-16938512 | None:intergenic |
| GCAGATGCTGCAATCTCATG+TGG | 0.654132 | 4_1:+16937650 | Msa0537880:CDS |
| AGTCAAAGGAAATAAAGTTG+GGG | 0.655094 | 4_1:+16938720 | Msa0537880:three_prime_UTR |
| ATAAGAGTAATGACATAACC+AGG | 0.665259 | 4_1:-16938602 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTGGTTATTTATTTTT+TGG | + | chr4_1:16938277-16938296 | Msa0537880:intron | 10.0% |
| !!! | TTTATTGGTTATTTATTTTT+TGG | + | chr4_1:16938277-16938296 | Msa0537880:intron | 10.0% |
| !!! | TTTTTCTTACTTCTAAAATT+TGG | - | chr4_1:16938134-16938153 | None:intergenic | 15.0% |
| !!! | AAACATTTTTGTGAATTTTT+TGG | + | chr4_1:16938196-16938215 | Msa0537880:intron | 15.0% |
| !!! | TTATTTTTTGGTGTTATTAT+TGG | + | chr4_1:16938289-16938308 | Msa0537880:intron | 15.0% |
| !! | TTATTCTTAATAGCATTAAA+TGG | - | chr4_1:16938458-16938477 | None:intergenic | 15.0% |
| !!! | TTTTTCTTACTTCTAAAATT+TGG | - | chr4_1:16938134-16938153 | None:intergenic | 15.0% |
| !!! | AAACATTTTTGTGAATTTTT+TGG | + | chr4_1:16938196-16938215 | Msa0537880:intron | 15.0% |
| !!! | TTATTTTTTGGTGTTATTAT+TGG | + | chr4_1:16938289-16938308 | Msa0537880:intron | 15.0% |
| !! | TTATTCTTAATAGCATTAAA+TGG | - | chr4_1:16938458-16938477 | None:intergenic | 15.0% |
| !!! | TTATTGGTTAATATTCAAGT+CGG | + | chr4_1:16938305-16938324 | Msa0537880:intron | 20.0% |
| !!! | GACTAGTTTTTTTTTTTGTT+TGG | + | chr4_1:16938351-16938370 | Msa0537880:intron | 20.0% |
| !!! | AGTTACTTAGTGAAATATTT+TGG | + | chr4_1:16938572-16938591 | Msa0537880:three_prime_UTR | 20.0% |
| !!! | GTTACTTAGTGAAATATTTT+GGG | + | chr4_1:16938573-16938592 | Msa0537880:three_prime_UTR | 20.0% |
| !!! | TTATTGGTTAATATTCAAGT+CGG | + | chr4_1:16938305-16938324 | Msa0537880:intron | 20.0% |
| !!! | GACTAGTTTTTTTTTTTGTT+TGG | + | chr4_1:16938351-16938370 | Msa0537880:intron | 20.0% |
| !!! | AGTTACTTAGTGAAATATTT+TGG | + | chr4_1:16938572-16938591 | Msa0537880:three_prime_UTR | 20.0% |
| !!! | GTTACTTAGTGAAATATTTT+GGG | + | chr4_1:16938573-16938592 | Msa0537880:three_prime_UTR | 20.0% |
| ! | AAGAATAATAATGAGACTGA+TGG | + | chr4_1:16938470-16938489 | Msa0537880:three_prime_UTR | 25.0% |
| ! | TCTATCTACTAATAAGTCAA+AGG | + | chr4_1:16938706-16938725 | Msa0537880:three_prime_UTR | 25.0% |
| ! | TAAGTCAAAGGAAATAAAGT+TGG | + | chr4_1:16938718-16938737 | Msa0537880:three_prime_UTR | 25.0% |
| ! | AAGTCAAAGGAAATAAAGTT+GGG | + | chr4_1:16938719-16938738 | Msa0537880:three_prime_UTR | 25.0% |
| ! | AAGAATAATAATGAGACTGA+TGG | + | chr4_1:16938470-16938489 | Msa0537880:three_prime_UTR | 25.0% |
| ! | TCTATCTACTAATAAGTCAA+AGG | + | chr4_1:16938706-16938725 | Msa0537880:three_prime_UTR | 25.0% |
| ! | TAAGTCAAAGGAAATAAAGT+TGG | + | chr4_1:16938718-16938737 | Msa0537880:three_prime_UTR | 25.0% |
| ! | AAGTCAAAGGAAATAAAGTT+GGG | + | chr4_1:16938719-16938738 | Msa0537880:three_prime_UTR | 25.0% |
| GAAAAATATAGCAAGAGTGA+AGG | - | chr4_1:16937951-16937970 | None:intergenic | 30.0% | |
| TTAAGAAACGCTGTATAAAG+AGG | + | chr4_1:16937982-16938001 | Msa0537880:intron | 30.0% | |
| TTGGTTATATTTACAGCATC+AGG | + | chr4_1:16938370-16938389 | Msa0537880:intron | 30.0% | |
| TGGTTATATTTACAGCATCA+GGG | + | chr4_1:16938371-16938390 | Msa0537880:intron | 30.0% | |
| GAGAAGTTTCCATATAACTT+TGG | - | chr4_1:16938418-16938437 | None:intergenic | 30.0% | |
| AATAATAATGAGACTGATGG+AGG | + | chr4_1:16938473-16938492 | Msa0537880:three_prime_UTR | 30.0% | |
| !!! | AAATATTTTGGGTTTGTACC+TGG | + | chr4_1:16938584-16938603 | Msa0537880:three_prime_UTR | 30.0% |
| ATAAGAGTAATGACATAACC+AGG | - | chr4_1:16938605-16938624 | None:intergenic | 30.0% | |
| AGTCAAAGGAAATAAAGTTG+GGG | + | chr4_1:16938720-16938739 | Msa0537880:three_prime_UTR | 30.0% | |
| GAAAAATATAGCAAGAGTGA+AGG | - | chr4_1:16937951-16937970 | None:intergenic | 30.0% | |
| TTAAGAAACGCTGTATAAAG+AGG | + | chr4_1:16937982-16938001 | Msa0537880:intron | 30.0% | |
| TTGGTTATATTTACAGCATC+AGG | + | chr4_1:16938370-16938389 | Msa0537880:intron | 30.0% | |
| TGGTTATATTTACAGCATCA+GGG | + | chr4_1:16938371-16938390 | Msa0537880:intron | 30.0% | |
| GAGAAGTTTCCATATAACTT+TGG | - | chr4_1:16938418-16938437 | None:intergenic | 30.0% | |
| AATAATAATGAGACTGATGG+AGG | + | chr4_1:16938473-16938492 | Msa0537880:three_prime_UTR | 30.0% | |
| !!! | AAATATTTTGGGTTTGTACC+TGG | + | chr4_1:16938584-16938603 | Msa0537880:three_prime_UTR | 30.0% |
| ATAAGAGTAATGACATAACC+AGG | - | chr4_1:16938605-16938624 | None:intergenic | 30.0% | |
| AGTCAAAGGAAATAAAGTTG+GGG | + | chr4_1:16938720-16938739 | Msa0537880:three_prime_UTR | 30.0% | |
| CTGATCTACTGCTTCTTTAT+TGG | + | chr4_1:16938262-16938281 | Msa0537880:intron | 35.0% | |
| AGTCTGGTATAAGAAGGATA+GGG | - | chr4_1:16938515-16938534 | None:intergenic | 35.0% | |
| CAATACAGTCTGGTATAAGA+AGG | - | chr4_1:16938521-16938540 | None:intergenic | 35.0% | |
| CTTCTTATACCAGACTGTAT+TGG | + | chr4_1:16938519-16938538 | Msa0537880:three_prime_UTR | 35.0% | |
| TAAGACAATCCAATACAGTC+TGG | - | chr4_1:16938531-16938550 | None:intergenic | 35.0% | |
| CTGATCTACTGCTTCTTTAT+TGG | + | chr4_1:16938262-16938281 | Msa0537880:intron | 35.0% | |
| AGTCTGGTATAAGAAGGATA+GGG | - | chr4_1:16938515-16938534 | None:intergenic | 35.0% | |
| CAATACAGTCTGGTATAAGA+AGG | - | chr4_1:16938521-16938540 | None:intergenic | 35.0% | |
| CTTCTTATACCAGACTGTAT+TGG | + | chr4_1:16938519-16938538 | Msa0537880:three_prime_UTR | 35.0% | |
| TAAGACAATCCAATACAGTC+TGG | - | chr4_1:16938531-16938550 | None:intergenic | 35.0% | |
| ATCTCATGTGGAACAGTAAC+TGG | + | chr4_1:16937662-16937681 | Msa0537880:CDS | 40.0% | |
| !! | CCTCTAAGATATGCAATGCA+TGG | - | chr4_1:16937698-16937717 | None:intergenic | 40.0% |
| CCATGCATTGCATATCTTAG+AGG | + | chr4_1:16937695-16937714 | Msa0537880:CDS | 40.0% | |
| TGCATTGCATATCTTAGAGG+TGG | + | chr4_1:16937698-16937717 | Msa0537880:CDS | 40.0% | |
| AATGTTAACACCGCATTTGC+CGG | - | chr4_1:16937873-16937892 | None:intergenic | 40.0% | |
| !! | GTAGAGGTACTGATCTTGTA+GGG | - | chr4_1:16937896-16937915 | None:intergenic | 40.0% |
| AAGAACTTACGTAGCACAGT+TGG | - | chr4_1:16937918-16937937 | None:intergenic | 40.0% | |
| AACGCTGTATAAAGAGGTCT+AGG | + | chr4_1:16937988-16938007 | Msa0537880:intron | 40.0% | |
| TATTCAAGTCGGTCGAAAAG+TGG | + | chr4_1:16938316-16938335 | Msa0537880:intron | 40.0% | |
| GTTGCAGCTCCAAAGTTATA+TGG | + | chr4_1:16938406-16938425 | Msa0537880:CDS | 40.0% | |
| CAGTCTGGTATAAGAAGGAT+AGG | - | chr4_1:16938516-16938535 | None:intergenic | 40.0% | |
| ATCTCATGTGGAACAGTAAC+TGG | + | chr4_1:16937662-16937681 | Msa0537880:CDS | 40.0% | |
| !! | CCTCTAAGATATGCAATGCA+TGG | - | chr4_1:16937698-16937717 | None:intergenic | 40.0% |
| CCATGCATTGCATATCTTAG+AGG | + | chr4_1:16937695-16937714 | Msa0537880:CDS | 40.0% | |
| TGCATTGCATATCTTAGAGG+TGG | + | chr4_1:16937698-16937717 | Msa0537880:CDS | 40.0% | |
| AATGTTAACACCGCATTTGC+CGG | - | chr4_1:16937873-16937892 | None:intergenic | 40.0% | |
| !! | GTAGAGGTACTGATCTTGTA+GGG | - | chr4_1:16937896-16937915 | None:intergenic | 40.0% |
| AAGAACTTACGTAGCACAGT+TGG | - | chr4_1:16937918-16937937 | None:intergenic | 40.0% | |
| AACGCTGTATAAAGAGGTCT+AGG | + | chr4_1:16937988-16938007 | Msa0537880:intron | 40.0% | |
| TATTCAAGTCGGTCGAAAAG+TGG | + | chr4_1:16938316-16938335 | Msa0537880:intron | 40.0% | |
| GTTGCAGCTCCAAAGTTATA+TGG | + | chr4_1:16938406-16938425 | Msa0537880:CDS | 40.0% | |
| CAGTCTGGTATAAGAAGGAT+AGG | - | chr4_1:16938516-16938535 | None:intergenic | 40.0% | |
| !! | AACTGCTTGAAAAGTGCTGC+TGG | + | chr4_1:16937806-16937825 | Msa0537880:CDS | 45.0% |
| TTGAATGCTAACACAGCTGC+TGG | + | chr4_1:16937842-16937861 | Msa0537880:CDS | 45.0% | |
| ATGTTAACACCGCATTTGCC+GGG | - | chr4_1:16937872-16937891 | None:intergenic | 45.0% | |
| !! | GGTAGAGGTACTGATCTTGT+AGG | - | chr4_1:16937897-16937916 | None:intergenic | 45.0% |
| !! | TTACGTAGCACAGTTGGTAG+AGG | - | chr4_1:16937912-16937931 | None:intergenic | 45.0% |
| !! | AACTGCTTGAAAAGTGCTGC+TGG | + | chr4_1:16937806-16937825 | Msa0537880:CDS | 45.0% |
| TTGAATGCTAACACAGCTGC+TGG | + | chr4_1:16937842-16937861 | Msa0537880:CDS | 45.0% | |
| ATGTTAACACCGCATTTGCC+GGG | - | chr4_1:16937872-16937891 | None:intergenic | 45.0% | |
| !! | GGTAGAGGTACTGATCTTGT+AGG | - | chr4_1:16937897-16937916 | None:intergenic | 45.0% |
| !! | TTACGTAGCACAGTTGGTAG+AGG | - | chr4_1:16937912-16937931 | None:intergenic | 45.0% |
| !!! | AAAAATTATAATATTTTTAG+AGG | + | chr4_1:16938149-16938168 | Msa0537880:intron | 5.0% |
| !!! | ACTTTATAATAATTTTTTTT+AGG | + | chr4_1:16938224-16938243 | Msa0537880:intron | 5.0% |
| !!! | AAAAATTATAATATTTTTAG+AGG | + | chr4_1:16938149-16938168 | Msa0537880:intron | 5.0% |
| !!! | ACTTTATAATAATTTTTTTT+AGG | + | chr4_1:16938224-16938243 | Msa0537880:intron | 5.0% |
| GTGCATGATCGTTGCACCTA+TGG | + | chr4_1:16937628-16937647 | Msa0537880:CDS | 50.0% | |
| GAGATTGCAGCATCTGCCAT+AGG | - | chr4_1:16937647-16937666 | None:intergenic | 50.0% | |
| GCAGATGCTGCAATCTCATG+TGG | + | chr4_1:16937650-16937669 | Msa0537880:CDS | 50.0% | |
| GCATATCTTAGAGGTGGTGC+TGG | + | chr4_1:16937704-16937723 | Msa0537880:CDS | 50.0% | |
| !! | AGTGCTGCTGGTGCTATTTC+TGG | + | chr4_1:16937818-16937837 | Msa0537880:CDS | 50.0% |
| ATGGAGGCTCATCTTATGCG+TGG | + | chr4_1:16938489-16938508 | Msa0537880:three_prime_UTR | 50.0% | |
| GTGCATGATCGTTGCACCTA+TGG | + | chr4_1:16937628-16937647 | Msa0537880:CDS | 50.0% | |
| GAGATTGCAGCATCTGCCAT+AGG | - | chr4_1:16937647-16937666 | None:intergenic | 50.0% | |
| GCAGATGCTGCAATCTCATG+TGG | + | chr4_1:16937650-16937669 | Msa0537880:CDS | 50.0% | |
| GCATATCTTAGAGGTGGTGC+TGG | + | chr4_1:16937704-16937723 | Msa0537880:CDS | 50.0% | |
| !! | AGTGCTGCTGGTGCTATTTC+TGG | + | chr4_1:16937818-16937837 | Msa0537880:CDS | 50.0% |
| ATGGAGGCTCATCTTATGCG+TGG | + | chr4_1:16938489-16938508 | Msa0537880:three_prime_UTR | 50.0% | |
| TTCACTCCAGCACAGCATGC+TGG | - | chr4_1:16937737-16937756 | None:intergenic | 55.0% | |
| AGCAGTTGCAAGCAGCCTGA+CGG | - | chr4_1:16937793-16937812 | None:intergenic | 55.0% | |
| !! | AACACAGCTGCTGGTCTTCC+CGG | + | chr4_1:16937851-16937870 | Msa0537880:CDS | 55.0% |
| TTCACTCCAGCACAGCATGC+TGG | - | chr4_1:16937737-16937756 | None:intergenic | 55.0% | |
| AGCAGTTGCAAGCAGCCTGA+CGG | - | chr4_1:16937793-16937812 | None:intergenic | 55.0% | |
| !! | AACACAGCTGCTGGTCTTCC+CGG | + | chr4_1:16937851-16937870 | Msa0537880:CDS | 55.0% |
| CCAGCACAGCATGCTGGAGA+TGG | - | chr4_1:16937731-16937750 | None:intergenic | 60.0% | |
| CCATCTCCAGCATGCTGTGC+TGG | + | chr4_1:16937728-16937747 | Msa0537880:CDS | 60.0% | |
| TTGCAAGCAGCCTGACGGTC+AGG | - | chr4_1:16937788-16937807 | None:intergenic | 60.0% | |
| !! | GCTGGTCTTCCCGGCAAATG+CGG | + | chr4_1:16937860-16937879 | Msa0537880:CDS | 60.0% |
| CCAGCACAGCATGCTGGAGA+TGG | - | chr4_1:16937731-16937750 | None:intergenic | 60.0% | |
| CCATCTCCAGCATGCTGTGC+TGG | + | chr4_1:16937728-16937747 | Msa0537880:CDS | 60.0% | |
| TTGCAAGCAGCCTGACGGTC+AGG | - | chr4_1:16937788-16937807 | None:intergenic | 60.0% | |
| !! | GCTGGTCTTCCCGGCAAATG+CGG | + | chr4_1:16937860-16937879 | Msa0537880:CDS | 60.0% |
| !! | ACGGTCAGGCGTGGTGGTGG+CGG | - | chr4_1:16937774-16937793 | None:intergenic | 70.0% |
| CTGACGGTCAGGCGTGGTGG+TGG | - | chr4_1:16937777-16937796 | None:intergenic | 70.0% | |
| CACCACCACGCCTGACCGTC+AGG | + | chr4_1:16937775-16937794 | Msa0537880:CDS | 70.0% | |
| AGCCTGACGGTCAGGCGTGG+TGG | - | chr4_1:16937780-16937799 | None:intergenic | 70.0% | |
| AGCAGCCTGACGGTCAGGCG+TGG | - | chr4_1:16937783-16937802 | None:intergenic | 70.0% | |
| !! | ACGGTCAGGCGTGGTGGTGG+CGG | - | chr4_1:16937774-16937793 | None:intergenic | 70.0% |
| CTGACGGTCAGGCGTGGTGG+TGG | - | chr4_1:16937777-16937796 | None:intergenic | 70.0% | |
| CACCACCACGCCTGACCGTC+AGG | + | chr4_1:16937775-16937794 | Msa0537880:CDS | 70.0% | |
| AGCCTGACGGTCAGGCGTGG+TGG | - | chr4_1:16937780-16937799 | None:intergenic | 70.0% | |
| AGCAGCCTGACGGTCAGGCG+TGG | - | chr4_1:16937783-16937802 | None:intergenic | 70.0% | |
| !! | GTCAGGCGTGGTGGTGGCGG+CGG | - | chr4_1:16937771-16937790 | None:intergenic | 75.0% |
| !! | GTCAGGCGTGGTGGTGGCGG+CGG | - | chr4_1:16937771-16937790 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 16937590 | 16938771 | 16937590 | ID=Msa0537880;Name=Msa0537880 |
| chr4_1 | mRNA | 16937590 | 16938771 | 16937590 | ID=Msa0537880-mRNA-1;Parent=Msa0537880;Name=Msa0537880-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0.5|1|1|1|2|309|130 |
| chr4_1 | exon | 16937590 | 16937905 | 16937590 | ID=Msa0537880-mRNA-1:exon:4994;Parent=Msa0537880-mRNA-1 |
| chr4_1 | exon | 16938386 | 16938771 | 16938386 | ID=Msa0537880-mRNA-1:exon:4995;Parent=Msa0537880-mRNA-1 |
| chr4_1 | CDS | 16937590 | 16937905 | 16937590 | ID=Msa0537880-mRNA-1:cds;Parent=Msa0537880-mRNA-1 |
| chr4_1 | CDS | 16938386 | 16938462 | 16938386 | ID=Msa0537880-mRNA-1:cds;Parent=Msa0537880-mRNA-1 |
| chr4_1 | three_prime_UTR | 16938463 | 16938771 | 16938463 | ID=Msa0537880-mRNA-1:three_prime_utr;Parent=Msa0537880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
