Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549760 | XP_013456369.1 | 95.985 | 548 | 21 | 1 | 1 | 547 | 1 | 548 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549760 | sp|Q9XIA4|CCS1_ARATH | 67.096 | 544 | 167 | 4 | 11 | 543 | 5 | 547 | 0.0 | 754 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549760 | A0A072UX27 | 95.985 | 548 | 21 | 1 | 1 | 547 | 1 | 548 | 0.0 | 1085 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012380 | Msa0549760 | 0.830237 | 3.289262e-55 | -8.615850e-47 |
| Msa0014410 | Msa0549760 | 0.831218 | 1.890479e-55 | -8.615850e-47 |
| Msa0026110 | Msa0549760 | 0.814288 | 1.663099e-51 | -8.615850e-47 |
| Msa0044180 | Msa0549760 | 0.839366 | 1.653962e-57 | -8.615850e-47 |
| Msa0064550 | Msa0549760 | 0.844894 | 5.699220e-59 | -8.615850e-47 |
| Msa0072830 | Msa0549760 | 0.814531 | 1.469135e-51 | -8.615850e-47 |
| Msa0072860 | Msa0549760 | 0.814873 | 1.234304e-51 | -8.615850e-47 |
| Msa0089510 | Msa0549760 | 0.801534 | 8.603891e-49 | -8.615850e-47 |
| Msa0089520 | Msa0549760 | 0.801264 | 9.775231e-49 | -8.615850e-47 |
| Msa0090860 | Msa0549760 | 0.855465 | 6.196839e-62 | -8.615850e-47 |
| Msa0101170 | Msa0549760 | -0.804634 | 1.965881e-49 | -8.615850e-47 |
| Msa0107460 | Msa0549760 | 0.808160 | 3.549596e-50 | -8.615850e-47 |
| Msa0109490 | Msa0549760 | 0.818613 | 1.788605e-52 | -8.615850e-47 |
| Msa0140290 | Msa0549760 | 0.874575 | 6.066161e-68 | -8.615850e-47 |
| Msa0154220 | Msa0549760 | 0.872254 | 3.661892e-67 | -8.615850e-47 |
| Msa0154240 | Msa0549760 | 0.826471 | 2.663504e-54 | -8.615850e-47 |
| Msa0154270 | Msa0549760 | 0.874595 | 5.975316e-68 | -8.615850e-47 |
| Msa0155610 | Msa0549760 | 0.838999 | 2.059388e-57 | -8.615850e-47 |
| Msa0166570 | Msa0549760 | 0.818735 | 1.678791e-52 | -8.615850e-47 |
| Msa0171920 | Msa0549760 | 0.856493 | 3.100227e-62 | -8.615850e-47 |
| Msa0176710 | Msa0549760 | 0.817638 | 2.971887e-52 | -8.615850e-47 |
| Msa0178940 | Msa0549760 | 0.803153 | 3.994045e-49 | -8.615850e-47 |
| Msa0183560 | Msa0549760 | 0.849591 | 2.931523e-60 | -8.615850e-47 |
| Msa0197030 | Msa0549760 | 0.820162 | 7.934785e-53 | -8.615850e-47 |
| Msa0199740 | Msa0549760 | 0.822334 | 2.504629e-53 | -8.615850e-47 |
| Msa0212730 | Msa0549760 | 0.850912 | 1.249399e-60 | -8.615850e-47 |
| Msa0216210 | Msa0549760 | 0.824988 | 5.989587e-54 | -8.615850e-47 |
| Msa0216390 | Msa0549760 | 0.804364 | 2.237764e-49 | -8.615850e-47 |
| Msa0216790 | Msa0549760 | 0.825589 | 4.316917e-54 | -8.615850e-47 |
| Msa0224370 | Msa0549760 | 0.824261 | 8.880950e-54 | -8.615850e-47 |
| Msa0224400 | Msa0549760 | 0.829147 | 6.056733e-55 | -8.615850e-47 |
| Msa0369100 | Msa0549760 | 0.831165 | 1.948067e-55 | -8.615850e-47 |
| Msa0380650 | Msa0549760 | 0.843071 | 1.755259e-58 | -8.615850e-47 |
| Msa0382590 | Msa0549760 | 0.855644 | 5.495106e-62 | -8.615850e-47 |
| Msa0387970 | Msa0549760 | 0.812052 | 5.146660e-51 | -8.615850e-47 |
| Msa0392050 | Msa0549760 | 0.867922 | 9.569894e-66 | -8.615850e-47 |
| Msa0392540 | Msa0549760 | 0.836964 | 6.872949e-57 | -8.615850e-47 |
| Msa0401340 | Msa0549760 | 0.848328 | 6.575334e-60 | -8.615850e-47 |
| Msa0404070 | Msa0549760 | 0.854793 | 9.712747e-62 | -8.615850e-47 |
| Msa0416060 | Msa0549760 | 0.805063 | 1.599255e-49 | -8.615850e-47 |
| Msa0416540 | Msa0549760 | 0.801987 | 6.946423e-49 | -8.615850e-47 |
| Msa0430290 | Msa0549760 | 0.845164 | 4.817620e-59 | -8.615850e-47 |
| Msa0432720 | Msa0549760 | 0.873446 | 1.461079e-67 | -8.615850e-47 |
| Msa0437550 | Msa0549760 | 0.853198 | 2.800143e-61 | -8.615850e-47 |
| Msa0437790 | Msa0549760 | 0.807422 | 5.095399e-50 | -8.615850e-47 |
| Msa0440310 | Msa0549760 | 0.808147 | 3.572912e-50 | -8.615850e-47 |
| Msa0441670 | Msa0549760 | 0.819227 | 1.297265e-52 | -8.615850e-47 |
| Msa0448120 | Msa0549760 | 0.833522 | 5.081189e-56 | -8.615850e-47 |
| Msa0463150 | Msa0549760 | 0.843452 | 1.389603e-58 | -8.615850e-47 |
| Msa0469950 | Msa0549760 | 0.865549 | 5.449473e-65 | -8.615850e-47 |
| Msa0480430 | Msa0549760 | 0.805631 | 1.215881e-49 | -8.615850e-47 |
| Msa0481490 | Msa0549760 | 0.865398 | 6.080733e-65 | -8.615850e-47 |
| Msa0238860 | Msa0549760 | 0.826564 | 2.531464e-54 | -8.615850e-47 |
| Msa0242290 | Msa0549760 | 0.819930 | 8.966251e-53 | -8.615850e-47 |
| Msa0253160 | Msa0549760 | 0.865273 | 6.657509e-65 | -8.615850e-47 |
| Msa0260190 | Msa0549760 | 0.834369 | 3.118639e-56 | -8.615850e-47 |
| Msa0265580 | Msa0549760 | 0.825235 | 5.236967e-54 | -8.615850e-47 |
| Msa0276590 | Msa0549760 | 0.816354 | 5.776065e-52 | -8.615850e-47 |
| Msa0280500 | Msa0549760 | 0.818459 | 1.938727e-52 | -8.615850e-47 |
| Msa0291940 | Msa0549760 | 0.861984 | 6.983287e-64 | -8.615850e-47 |
| Msa0303440 | Msa0549760 | 0.835526 | 1.594038e-56 | -8.615850e-47 |
| Msa0303500 | Msa0549760 | 0.829766 | 4.283348e-55 | -8.615850e-47 |
| Msa0316610 | Msa0549760 | 0.803458 | 3.453178e-49 | -8.615850e-47 |
| Msa0334280 | Msa0549760 | 0.804963 | 1.678017e-49 | -8.615850e-47 |
| Msa0344680 | Msa0549760 | 0.869700 | 2.543078e-66 | -8.615850e-47 |
| Msa0354390 | Msa0549760 | 0.822050 | 2.914060e-53 | -8.615850e-47 |
| Msa0358290 | Msa0549760 | 0.857959 | 1.143715e-62 | -8.615850e-47 |
| Msa0524960 | Msa0549760 | 0.815568 | 8.649465e-52 | -8.615850e-47 |
| Msa0525270 | Msa0549760 | 0.895953 | 5.868072e-76 | -8.615850e-47 |
| Msa0525280 | Msa0549760 | 0.892479 | 1.528149e-74 | -8.615850e-47 |
| Msa0530340 | Msa0549760 | 0.815260 | 1.012461e-51 | -8.615850e-47 |
| Msa0545230 | Msa0549760 | 0.808069 | 3.711836e-50 | -8.615850e-47 |
| Msa0546080 | Msa0549760 | 0.818751 | 1.664137e-52 | -8.615850e-47 |
| Msa0548210 | Msa0549760 | 0.820829 | 5.577900e-53 | -8.615850e-47 |
| Msa0548710 | Msa0549760 | 0.804395 | 2.204769e-49 | -8.615850e-47 |
| Msa0549540 | Msa0549760 | 0.852058 | 5.920356e-61 | -8.615850e-47 |
| Msa0549760 | Msa0553230 | 0.810471 | 1.134043e-50 | -8.615850e-47 |
| Msa0549760 | Msa0557490 | 0.836924 | 7.035222e-57 | -8.615850e-47 |
| Msa0549760 | Msa0577230 | 0.802774 | 4.782492e-49 | -8.615850e-47 |
| Msa0549760 | Msa0583740 | 0.836072 | 1.159479e-56 | -8.615850e-47 |
| Msa0549760 | Msa0584280 | 0.822552 | 2.229144e-53 | -8.615850e-47 |
| Msa0549760 | Msa0587900 | 0.802760 | 4.814127e-49 | -8.615850e-47 |
| Msa0549760 | Msa0604880 | 0.822281 | 2.576047e-53 | -8.615850e-47 |
| Msa0549760 | Msa0605250 | 0.874515 | 6.361162e-68 | -8.615850e-47 |
| Msa0549760 | Msa0609790 | 0.898871 | 3.467923e-77 | -8.615850e-47 |
| Msa0549760 | Msa0622250 | 0.873092 | 1.921114e-67 | -8.615850e-47 |
| Msa0549760 | Msa0627050 | 0.855377 | 6.571776e-62 | -8.615850e-47 |
| Msa0549760 | Msa0636720 | 0.888683 | 4.751165e-73 | -8.615850e-47 |
| Msa0549760 | Msa0644630 | 0.811490 | 6.820351e-51 | -8.615850e-47 |
| Msa0549760 | Msa0645040 | 0.800542 | 1.372737e-48 | -8.615850e-47 |
| Msa0549760 | Msa0646190 | 0.870215 | 1.727095e-66 | -8.615850e-47 |
| Msa0549760 | Msa0649310 | 0.811699 | 6.143462e-51 | -8.615850e-47 |
| Msa0549760 | Msa0667970 | 0.802034 | 6.792505e-49 | -8.615850e-47 |
| Msa0549760 | Msa0679780 | 0.819383 | 1.195588e-52 | -8.615850e-47 |
| Msa0549760 | Msa0681210 | 0.832626 | 8.490996e-56 | -8.615850e-47 |
| Msa0549760 | Msa0684520 | 0.826096 | 3.272464e-54 | -8.615850e-47 |
| Msa0549760 | Msa0685890 | 0.829861 | 4.061638e-55 | -8.615850e-47 |
| Msa0549760 | Msa0692420 | 0.845778 | 3.283478e-59 | -8.615850e-47 |
| Msa0549760 | Msa0704220 | 0.822997 | 1.755988e-53 | -8.615850e-47 |
| Msa0549760 | Msa0705810 | 0.805149 | 1.534189e-49 | -8.615850e-47 |
| Msa0549760 | Msa0713210 | 0.804712 | 1.893570e-49 | -8.615850e-47 |
| Msa0549760 | Msa0729550 | 0.815150 | 1.071102e-51 | -8.615850e-47 |
| Msa0549760 | Msa0738880 | 0.828630 | 8.078310e-55 | -8.615850e-47 |
| Msa0549760 | Msa0740210 | 0.807463 | 4.993690e-50 | -8.615850e-47 |
| Msa0549760 | Msa0748330 | 0.872969 | 2.112833e-67 | -8.615850e-47 |
| Msa0549760 | Msa0769830 | 0.830939 | 2.213734e-55 | -8.615850e-47 |
| Msa0549760 | Msa0781390 | 0.813801 | 2.129075e-51 | -8.615850e-47 |
| Msa0549760 | Msa0783280 | 0.819328 | 1.230133e-52 | -8.615850e-47 |
| Msa0549760 | Msa0790640 | 0.881422 | 2.431945e-70 | -8.615850e-47 |
| Msa0549760 | Msa0793100 | 0.836127 | 1.122421e-56 | -8.615850e-47 |
| Msa0549760 | Msa0794460 | 0.809749 | 1.622291e-50 | -8.615850e-47 |
| Msa0549760 | Msa0802210 | 0.809222 | 2.105532e-50 | -8.615850e-47 |
| Msa0549760 | Msa0806720 | 0.881073 | 3.248136e-70 | -8.615850e-47 |
| Msa0549760 | Msa0806760 | 0.861637 | 8.920446e-64 | -8.615850e-47 |
| Msa0549760 | Msa0809300 | 0.813343 | 2.685679e-51 | -8.615850e-47 |
| Msa0549760 | Msa0819320 | 0.828411 | 9.123748e-55 | -8.615850e-47 |
| Msa0549760 | Msa0819370 | 0.830200 | 3.357160e-55 | -8.615850e-47 |
| Msa0549760 | Msa0848760 | 0.845509 | 3.885096e-59 | -8.615850e-47 |
| Msa0549760 | Msa0860920 | 0.801817 | 7.527008e-49 | -8.615850e-47 |
| Msa0549760 | Msa0882700 | 0.815532 | 8.807789e-52 | -8.615850e-47 |
| Msa0549760 | Msa0929530 | 0.808454 | 3.072716e-50 | -8.615850e-47 |
| Msa0549760 | Msa0929940 | 0.818561 | 1.838080e-52 | -8.615850e-47 |
| Msa0549760 | Msa0944690 | 0.813845 | 2.082041e-51 | -8.615850e-47 |
| Msa0549760 | Msa0945960 | 0.866757 | 2.257084e-65 | -8.615850e-47 |
| Msa0549760 | Msa0964650 | 0.809982 | 1.445278e-50 | -8.615850e-47 |
| Msa0549760 | Msa0968780 | 0.850854 | 1.296872e-60 | -8.615850e-47 |
| Msa0549760 | Msa0973890 | 0.804722 | 1.884795e-49 | -8.615850e-47 |
| Msa0549760 | Msa0984000 | 0.860294 | 2.283798e-63 | -8.615850e-47 |
| Msa0549760 | Msa1030870 | 0.813167 | 2.935746e-51 | -8.615850e-47 |
| Msa0549760 | Msa1034930 | 0.832957 | 7.027955e-56 | -8.615850e-47 |
| Msa0549760 | Msa1036250 | 0.837011 | 6.685605e-57 | -8.615850e-47 |
| Msa0549760 | Msa1040390 | 0.818533 | 1.865205e-52 | -8.615850e-47 |
| Msa0549760 | Msa1053690 | 0.834856 | 2.352432e-56 | -8.615850e-47 |
| Msa0549760 | Msa1069960 | 0.812686 | 3.741952e-51 | -8.615850e-47 |
| Msa0549760 | Msa1074980 | 0.809835 | 1.554991e-50 | -8.615850e-47 |
| Msa0549760 | Msa1076520 | 0.834507 | 2.880028e-56 | -8.615850e-47 |
| Msa0549760 | Msa1079480 | 0.818790 | 1.631229e-52 | -8.615850e-47 |
| Msa0549760 | Msa1082150 | 0.832952 | 7.046830e-56 | -8.615850e-47 |
| Msa0549760 | Msa1083140 | 0.835085 | 2.060821e-56 | -8.615850e-47 |
| Msa0549760 | Msa1091230 | 0.807123 | 5.894079e-50 | -8.615850e-47 |
| Msa0549760 | Msa1118460 | 0.835457 | 1.659868e-56 | -8.615850e-47 |
| Msa0549760 | Msa1119860 | 0.812858 | 3.431587e-51 | -8.615850e-47 |
| Msa0549760 | Msa1122720 | 0.800120 | 1.673175e-48 | -8.615850e-47 |
| Msa0549760 | Msa1127900 | 0.859772 | 3.281335e-63 | -8.615850e-47 |
| Msa0549760 | Msa1134560 | 0.816448 | 5.502617e-52 | -8.615850e-47 |
| Msa0549760 | Msa1144730 | 0.869612 | 2.717759e-66 | -8.615850e-47 |
| Msa0549760 | Msa1144950 | 0.831648 | 1.481500e-55 | -8.615850e-47 |
| Msa0549760 | Msa1158090 | 0.822052 | 2.911655e-53 | -8.615850e-47 |
| Msa0549760 | Msa1165810 | 0.860375 | 2.158160e-63 | -8.615850e-47 |
| Msa0549760 | Msa1166960 | 0.816349 | 5.790091e-52 | -8.615850e-47 |
| Msa0549760 | Msa1173380 | 0.816582 | 5.135433e-52 | -8.615850e-47 |
| Msa0549760 | Msa1177240 | 0.840179 | 1.016060e-57 | -8.615850e-47 |
| Msa0549760 | Msa1181510 | 0.830370 | 3.050756e-55 | -8.615850e-47 |
| Msa0549760 | Msa1184010 | 0.817225 | 3.682545e-52 | -8.615850e-47 |
| Msa0549760 | Msa1228350 | 0.826313 | 2.905440e-54 | -8.615850e-47 |
| Msa0549760 | Msa1229640 | 0.814081 | 1.847749e-51 | -8.615850e-47 |
| Msa0549760 | Msa1232270 | 0.801548 | 8.550428e-49 | -8.615850e-47 |
| Msa0549760 | Msa1239900 | 0.840347 | 9.186312e-58 | -8.615850e-47 |
| Msa0549760 | Msa1248220 | 0.835958 | 1.239148e-56 | -8.615850e-47 |
| Msa0549760 | Msa1255020 | 0.840413 | 8.826270e-58 | -8.615850e-47 |
| Msa0549760 | Msa1263590 | 0.814801 | 1.280635e-51 | -8.615850e-47 |
| Msa0549760 | Msa1263670 | 0.811756 | 5.971124e-51 | -8.615850e-47 |
| Msa0549760 | Msa1272340 | 0.820791 | 5.690831e-53 | -8.615850e-47 |
| Msa0549760 | Msa1272950 | 0.804267 | 2.345011e-49 | -8.615850e-47 |
| Msa0549760 | Msa1281270 | 0.863044 | 3.296301e-64 | -8.615850e-47 |
| Msa0549760 | Msa1293050 | 0.821341 | 4.250088e-53 | -8.615850e-47 |
| Msa0549760 | Msa1295470 | 0.833441 | 5.324988e-56 | -8.615850e-47 |
| Msa0549760 | Msa1306190 | 0.827404 | 1.593850e-54 | -8.615850e-47 |
| Msa0549760 | Msa1306200 | 0.808443 | 3.089928e-50 | -8.615850e-47 |
| Msa0549760 | Msa1310250 | 0.802449 | 5.579725e-49 | -8.615850e-47 |
| Msa0549760 | Msa1317030 | 0.826789 | 2.237192e-54 | -8.615850e-47 |
| Msa0549760 | Msa1320380 | 0.864351 | 1.294623e-64 | -8.615850e-47 |
| Msa0549760 | Msa1326400 | 0.808851 | 2.527661e-50 | -8.615850e-47 |
| Msa0549760 | Msa1338590 | 0.801134 | 1.039096e-48 | -8.615850e-47 |
| Msa0549760 | Msa1349810 | 0.856177 | 3.836602e-62 | -8.615850e-47 |
| Msa0549760 | Msa1354090 | 0.865744 | 4.729112e-65 | -8.615850e-47 |
| Msa0549760 | Msa1358340 | 0.890740 | 7.495477e-74 | -8.615850e-47 |
| Msa0549760 | Msa1359890 | 0.886860 | 2.368261e-72 | -8.615850e-47 |
| Msa0549760 | Msa1369180 | 0.807960 | 3.915934e-50 | -8.615850e-47 |
| Msa0549760 | Msa1373390 | 0.800812 | 1.209160e-48 | -8.615850e-47 |
| Msa0549760 | Msa1375780 | 0.859997 | 2.808257e-63 | -8.615850e-47 |
| Msa0549760 | Msa1378470 | 0.815427 | 9.298417e-52 | -8.615850e-47 |
| Msa0549760 | Msa1394900 | 0.879308 | 1.385616e-69 | -8.615850e-47 |
| Msa0549760 | Msa1405380 | 0.809649 | 1.704714e-50 | -8.615850e-47 |
| Msa0549760 | Msa1418600 | 0.816047 | 6.761630e-52 | -8.615850e-47 |
| Msa0549760 | Msa1423190 | 0.810381 | 1.185866e-50 | -8.615850e-47 |
| Msa0549760 | Msa1431730 | 0.810946 | 8.952866e-51 | -8.615850e-47 |
| Msa0549760 | Msa1434660 | 0.863025 | 3.341028e-64 | -8.615850e-47 |
| Msa0549760 | Msa1459540 | 0.839529 | 1.500716e-57 | -8.615850e-47 |
| Msa0549760 | Msa1466350 | 0.894654 | 2.012893e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549760 | MtrunA17_Chr4g0034481 | 95.985 | 548 | 21 | 1 | 1 | 547 | 1 | 548 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549760 | AT1G49380.1 | 67.096 | 544 | 167 | 4 | 11 | 543 | 5 | 547 | 0.0 | 754 |
Find 145 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACCATAAGGACCTTTC+TGG | 0.163357 | 4_1:+44962487 | None:intergenic |
| CTTGCAATGTTGGCCCTTCT+TGG | 0.176283 | 4_1:-44961491 | Msa0549760:CDS |
| TCTAATTTGCCTTTGGCTAT+TGG | 0.216573 | 4_1:-44962429 | Msa0549760:CDS |
| TTCTGGTTCTTTGAGCTTGC+TGG | 0.229099 | 4_1:+44962504 | None:intergenic |
| GACATGAATCTCTGTATTAA+AGG | 0.232537 | 4_1:+44960841 | None:intergenic |
| CAGAGCAAAGTTAGAGTTTC+CGG | 0.234060 | 4_1:-44959081 | Msa0549760:CDS |
| AATGGAGATAAGAAACTTTA+TGG | 0.238655 | 4_1:-44960419 | Msa0549760:CDS |
| GATGATGATTCAACTATTTC+AGG | 0.240407 | 4_1:+44959029 | None:intergenic |
| CAACTGCAAACTTTACATTA+TGG | 0.242539 | 4_1:+44958684 | None:intergenic |
| GATGATCTTCAAGGTAATTC+TGG | 0.269278 | 4_1:+44961588 | None:intergenic |
| AGTGCAGCAGGGAGCTTTAA+AGG | 0.277235 | 4_1:-44960947 | Msa0549760:CDS |
| TGACATACAAACATACAAAT+TGG | 0.285940 | 4_1:-44958877 | Msa0549760:three_prime_UTR |
| TTATCTCCATTGATCTTTAG+AGG | 0.290427 | 4_1:+44960431 | None:intergenic |
| CTTGAAGATCATCCTGTGTT+AGG | 0.290884 | 4_1:-44961578 | Msa0549760:CDS |
| AGTATTCACTTCCCTAAATC+AGG | 0.304322 | 4_1:+44958718 | None:intergenic |
| GTGATACCATCATATCTTAA+AGG | 0.306162 | 4_1:+44960533 | None:intergenic |
| ATTTCCCTTCCTTATCATAA+AGG | 0.309945 | 4_1:+44959701 | None:intergenic |
| ACTCCAATCCGTCTGGTATA+TGG | 0.313882 | 4_1:+44960511 | None:intergenic |
| CACTCATCAAGGTTTCAAAA+AGG | 0.314179 | 4_1:-44961430 | Msa0549760:intron |
| TTGAGAAGACATTGATTCAT+AGG | 0.322099 | 4_1:+44962720 | None:intergenic |
| AGACGTCGGTACTATATTAA+TGG | 0.326408 | 4_1:-44961248 | Msa0549760:CDS |
| ATTGTCGTTGTTGATGCAAT+AGG | 0.332912 | 4_1:-44959622 | Msa0549760:CDS |
| GATTCTCTCTAATTTGCCTT+TGG | 0.333030 | 4_1:-44962436 | Msa0549760:CDS |
| TCATGTCAACAGATTCTCTA+TGG | 0.335451 | 4_1:-44960825 | Msa0549760:CDS |
| CAGTTTCAGTTTCCAGTTTG+AGG | 0.335650 | 4_1:+44962786 | None:intergenic |
| ATAAGAAGAGCTTTGGTATC+TGG | 0.336359 | 4_1:+44958760 | None:intergenic |
| GATGGGACAACAGTCGTTAT+TGG | 0.338022 | 4_1:-44959116 | Msa0549760:CDS |
| GATAAGGAAGGGAAATTTGC+AGG | 0.341411 | 4_1:-44959694 | Msa0549760:CDS |
| TTGTGTAAGTGCAGGCTATA+AGG | 0.342045 | 4_1:+44961462 | None:intergenic |
| TATAGCACTGCTGTTGATAA+TGG | 0.346092 | 4_1:-44960984 | Msa0549760:CDS |
| TTGATTGGGAGCTTTGAATT+AGG | 0.356379 | 4_1:+44959661 | None:intergenic |
| TGTTAACTCTCCTGATGTTA+AGG | 0.369333 | 4_1:-44960375 | Msa0549760:CDS |
| GTCAATTGTCCTTTATGATA+AGG | 0.380317 | 4_1:-44959710 | Msa0549760:CDS |
| TCTGAGCCATCAATGTTGAT+TGG | 0.380893 | 4_1:+44959646 | None:intergenic |
| CTGAGCCATCAATGTTGATT+GGG | 0.384417 | 4_1:+44959647 | None:intergenic |
| AGGTTCAGTCACTGTGCCTC+AGG | 0.385654 | 4_1:-44960927 | Msa0549760:CDS |
| GGAAATAAAGACTCTTCAAT+TGG | 0.391431 | 4_1:-44958944 | Msa0549760:three_prime_UTR |
| ACCTATATTTCTTGCAATGT+TGG | 0.395976 | 4_1:-44961501 | Msa0549760:CDS |
| AGTTTCAGTTTCCAGTTTGA+GGG | 0.403729 | 4_1:+44962787 | None:intergenic |
| GGTCAAGAAGTTGAGTAAAA+AGG | 0.404743 | 4_1:-44962466 | Msa0549760:CDS |
| CCAGTTGTATATGCTGGATT+TGG | 0.416439 | 4_1:-44959466 | Msa0549760:CDS |
| ACACACACAGTCCCTCAAAC+TGG | 0.417801 | 4_1:-44962798 | Msa0549760:five_prime_UTR |
| AAAACTCAGGTTTCTCGCCT+TGG | 0.423189 | 4_1:+44961615 | None:intergenic |
| GGTGCCATAGCCAAGTTATA+AGG | 0.424092 | 4_1:+44960452 | None:intergenic |
| AAGCTCCCAATCAACATTGA+TGG | 0.424320 | 4_1:-44959652 | Msa0549760:CDS |
| AAGAACCAGAAAGGTCCTTA+TGG | 0.425770 | 4_1:-44962492 | Msa0549760:CDS |
| TTGTCGTTGTTGATGCAATA+GGG | 0.434513 | 4_1:-44959621 | Msa0549760:CDS |
| ACAAGATATAAGAAGAGCTT+TGG | 0.436565 | 4_1:+44958753 | None:intergenic |
| TGATACCATCATATCTTAAA+GGG | 0.444057 | 4_1:+44960534 | None:intergenic |
| GAGTAGTGGCTTGGACTTGA+AGG | 0.455565 | 4_1:-44959599 | Msa0549760:intron |
| GCCAACATTGCAAGAAATAT+AGG | 0.459699 | 4_1:+44961500 | None:intergenic |
| GACGTCGGTACTATATTAAT+GGG | 0.459990 | 4_1:-44961247 | Msa0549760:CDS |
| TTCTCCTGTGTGAGTGGTGG+AGG | 0.465251 | 4_1:+44962552 | None:intergenic |
| GTTAACTCTCCTGATGTTAA+GGG | 0.468560 | 4_1:-44960374 | Msa0549760:CDS |
| AGCAAGAGGTTCATCTCGTC+CGG | 0.469158 | 4_1:+44959062 | None:intergenic |
| ATGATGATTCAACTATTTCA+GGG | 0.471460 | 4_1:+44959030 | None:intergenic |
| GGAGGAACGTTAAGTGCAGC+AGG | 0.475028 | 4_1:-44960959 | Msa0549760:CDS |
| AACTTCTTGACCACACCATA+AGG | 0.476566 | 4_1:+44962477 | None:intergenic |
| TCTATGGATTATTATGAAAG+TGG | 0.477182 | 4_1:-44960809 | Msa0549760:CDS |
| TTAATATAGTACCGACGTCT+TGG | 0.478574 | 4_1:+44961251 | None:intergenic |
| CGATCTTTCCCTCTTGAACA+TGG | 0.481054 | 4_1:-44960597 | Msa0549760:CDS |
| CTTTCCCTCTTGAACATGGA+TGG | 0.481191 | 4_1:-44960593 | Msa0549760:CDS |
| AACATACAAATTGGATGCCA+TGG | 0.481242 | 4_1:-44958868 | Msa0549760:three_prime_UTR |
| TTTGAACAAGGGATGAAAAG+TGG | 0.482240 | 4_1:+44962692 | None:intergenic |
| AGTGCTATATGAACGCCAAC+AGG | 0.487373 | 4_1:+44960998 | None:intergenic |
| CCAAATCCAGCATATACAAC+TGG | 0.494043 | 4_1:+44959466 | None:intergenic |
| GCATATACAACTGGCACACC+AGG | 0.494175 | 4_1:+44959475 | None:intergenic |
| ACTTACATTCCCTTAACATC+AGG | 0.494664 | 4_1:+44960365 | None:intergenic |
| ATGAAGTATATAGCAATGAC+AGG | 0.494962 | 4_1:-44958906 | Msa0549760:three_prime_UTR |
| TTTGTTGTAGGAGATGTTCT+CGG | 0.496044 | 4_1:-44960896 | Msa0549760:CDS |
| CTAACACAGGATGATCTTCA+AGG | 0.496539 | 4_1:+44961579 | None:intergenic |
| CTGAAATACTCCAATCCGTC+TGG | 0.496597 | 4_1:+44960504 | None:intergenic |
| CAGCTATTTATCTCATTCAC+AGG | 0.500481 | 4_1:-44959419 | Msa0549760:intron |
| CAATGAAGGACCTTATAACT+TGG | 0.502844 | 4_1:-44960462 | Msa0549760:CDS |
| AAGATATGGGCTTTACAAGA+TGG | 0.504823 | 4_1:-44959134 | Msa0549760:CDS |
| TCTGTATTAAAGGCATCAGT+TGG | 0.505969 | 4_1:+44960851 | None:intergenic |
| AACACAACTTCCACTCATCA+AGG | 0.507125 | 4_1:-44961441 | Msa0549760:CDS |
| GGAGATGTTCTCGGTCCTAC+CGG | 0.507387 | 4_1:-44960887 | Msa0549760:CDS |
| ATAGCACTGCTGTTGATAAT+GGG | 0.512040 | 4_1:-44960983 | Msa0549760:CDS |
| GGAGAGTTAACATCTCCAAC+AGG | 0.513280 | 4_1:+44960386 | None:intergenic |
| TGCAATAGGGAGTAGTGGCT+TGG | 0.516336 | 4_1:-44959608 | Msa0549760:CDS |
| GGATTATAGGTATTCTTGAA+AGG | 0.517238 | 4_1:-44961064 | Msa0549760:intron |
| ATTAATGGGAGCTGGATATG+AGG | 0.517838 | 4_1:-44961233 | Msa0549760:intron |
| CTATGGATTATTATGAAAGT+GGG | 0.518677 | 4_1:-44960808 | Msa0549760:CDS |
| GGTGTGCCAGTTGTATATGC+TGG | 0.525293 | 4_1:-44959472 | Msa0549760:CDS |
| ATTGTCCTTTATGATAAGGA+AGG | 0.526577 | 4_1:-44959706 | Msa0549760:CDS |
| CAAATTCTCAAGGACAATGA+AGG | 0.527947 | 4_1:-44960476 | Msa0549760:CDS |
| ATGGCACCTCTAAAGATCAA+TGG | 0.528038 | 4_1:-44960437 | Msa0549760:CDS |
| GTCATTTATGCACTCTGCTG+AGG | 0.533358 | 4_1:-44961320 | Msa0549760:CDS |
| GGTACTATATTAATGGGAGC+TGG | 0.536365 | 4_1:-44961241 | Msa0549760:CDS |
| TCACCATATACCAGACGGAT+TGG | 0.537124 | 4_1:-44960514 | Msa0549760:CDS |
| TTCAGCTCTGCAAATTCTCA+AGG | 0.537400 | 4_1:-44960486 | Msa0549760:CDS |
| TGTGTCACATGATGTCTTTG+AGG | 0.540282 | 4_1:-44962746 | Msa0549760:CDS |
| AACGACCCTTTAAGATATGA+TGG | 0.540927 | 4_1:-44960539 | Msa0549760:CDS |
| TTTGTTGATTGACTCATCCA+TGG | 0.541407 | 4_1:+44958851 | None:intergenic |
| ACGTCTTGGATTGATGCTCT+TGG | 0.547830 | 4_1:+44961265 | None:intergenic |
| GCCGGTCGGCTAGCTCCTGT+TGG | 0.547932 | 4_1:-44961013 | Msa0549760:CDS |
| GTATTCACTTCCCTAAATCA+GGG | 0.548743 | 4_1:+44958719 | None:intergenic |
| TTGAACGATAGTGTCGTCAA+TGG | 0.557745 | 4_1:-44958606 | Msa0549760:three_prime_UTR |
| ATCTAAGCAAACTGATAGCA+TGG | 0.557916 | 4_1:-44959003 | Msa0549760:CDS |
| TTGAACAAGGGATGAAAAGT+GGG | 0.557949 | 4_1:+44962693 | None:intergenic |
| TATAAGGGATGCACCAAGAA+GGG | 0.561371 | 4_1:+44961478 | None:intergenic |
| CTATAAGGGATGCACCAAGA+AGG | 0.562534 | 4_1:+44961477 | None:intergenic |
| TGTGTAAGTGCAGGCTATAA+GGG | 0.563934 | 4_1:+44961463 | None:intergenic |
| AGATATGGGCTTTACAAGAT+GGG | 0.567327 | 4_1:-44959133 | Msa0549760:CDS |
| CCACGAAAAGCATACAAAGT+TGG | 0.570654 | 4_1:+44961040 | None:intergenic |
| GCCAACAGGAGCTAGCCGAC+CGG | 0.571087 | 4_1:+44961012 | None:intergenic |
| CATAAAGGACAATTGACTGC+AGG | 0.571577 | 4_1:+44959716 | None:intergenic |
| CATGTTCAAGAGGGAAAGAT+CGG | 0.573438 | 4_1:+44960598 | None:intergenic |
| ATTAAAGGCATCAGTTGGAA+AGG | 0.574717 | 4_1:+44960856 | None:intergenic |
| TTGTCCTTTATGATAAGGAA+GGG | 0.575204 | 4_1:-44959705 | Msa0549760:CDS |
| GCAAGCTCAAAGAACCAGAA+AGG | 0.582871 | 4_1:-44962501 | Msa0549760:CDS |
| AGTTCTGTTGAATTTGAACA+AGG | 0.583852 | 4_1:+44962680 | None:intergenic |
| TGGATGGAAAAGAAGTAATG+AGG | 0.584497 | 4_1:-44960577 | Msa0549760:CDS |
| GGGACAACAGTCGTTATTGG+AGG | 0.587821 | 4_1:-44959113 | Msa0549760:CDS |
| TCATCATTCTCCTGTGTGAG+TGG | 0.588845 | 4_1:+44962546 | None:intergenic |
| TCATTCTCCTGTGTGAGTGG+TGG | 0.589165 | 4_1:+44962549 | None:intergenic |
| GGTTCAGTCACTGTGCCTCA+GGG | 0.589484 | 4_1:-44960926 | Msa0549760:CDS |
| TGCAGTTGATGGTGAATGAG+AGG | 0.596112 | 4_1:+44962640 | None:intergenic |
| GTTGATGCAATAGGGAGTAG+TGG | 0.598418 | 4_1:-44959613 | Msa0549760:CDS |
| TTCACCTCCACCACTCACAC+AGG | 0.605059 | 4_1:-44962556 | Msa0549760:CDS |
| TAATTCTGGAAATAAAACTC+AGG | 0.610523 | 4_1:+44961602 | None:intergenic |
| AGTTGGAAAGGAAAGAAAGC+CGG | 0.613737 | 4_1:+44960868 | None:intergenic |
| AGGACCTTATAACTTGGCTA+TGG | 0.614764 | 4_1:-44960456 | Msa0549760:CDS |
| AACATTTCTCCAATAGCCAA+AGG | 0.619561 | 4_1:+44962420 | None:intergenic |
| TATGTTACGCAGACTGACCC+TGG | 0.626560 | 4_1:-44959493 | Msa0549760:intron |
| GCAGTTGATGGTGAATGAGA+GGG | 0.632096 | 4_1:+44962641 | None:intergenic |
| AAGTTGTGTTGTGTAAGTGC+AGG | 0.638222 | 4_1:+44961454 | None:intergenic |
| GGACAACAGTCGTTATTGGA+GGG | 0.644415 | 4_1:-44959112 | Msa0549760:CDS |
| CCAGAAAGGTCCTTATGGTG+TGG | 0.650861 | 4_1:-44962487 | Msa0549760:CDS |
| GAGAATGATGATATCAACAG+TGG | 0.661987 | 4_1:-44962534 | Msa0549760:CDS |
| CTGCTGTTGATAATGGGTGG+AGG | 0.663763 | 4_1:-44960977 | Msa0549760:CDS |
| TATGGATTATTATGAAAGTG+GGG | 0.664635 | 4_1:-44960807 | Msa0549760:CDS |
| AATACATGTGATCAAAACCA+AGG | 0.672461 | 4_1:+44961528 | None:intergenic |
| TGGTATCACCATATACCAGA+CGG | 0.679132 | 4_1:-44960519 | Msa0549760:CDS |
| GTTCTGTTGAATTTGAACAA+GGG | 0.681172 | 4_1:+44962681 | None:intergenic |
| TATTCACTTCCCTAAATCAG+GGG | 0.683600 | 4_1:+44958720 | None:intergenic |
| GCACTGCTGTTGATAATGGG+TGG | 0.691436 | 4_1:-44960980 | Msa0549760:CDS |
| GGATTATTATGAAAGTGGGG+AGG | 0.692179 | 4_1:-44960804 | Msa0549760:intron |
| TGAAGTATATAGCAATGACA+GGG | 0.692723 | 4_1:-44958905 | Msa0549760:three_prime_UTR |
| CATATACAACTGGCACACCA+GGG | 0.701363 | 4_1:+44959476 | None:intergenic |
| GAGGAACGTTAAGTGCAGCA+GGG | 0.702940 | 4_1:-44960958 | Msa0549760:CDS |
| GGAAAGGAAAGAAAGCCGGT+AGG | 0.713048 | 4_1:+44960872 | None:intergenic |
| AGAGCATCAATCCAAGACGT+CGG | 0.726779 | 4_1:-44961262 | Msa0549760:CDS |
| ACAACAAAATTCAGACCCTG+AGG | 0.734369 | 4_1:+44960911 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGATTAAATTGATTTT+AGG | - | chr4_1:44959463-44959482 | Msa0549760:CDS | 10.0% |
| !!! | AAAAATCTTTTTTCTTTTAT+TGG | + | chr4_1:44961474-44961493 | None:intergenic | 10.0% |
| !!! | ATTTATCTTATCTTTTGATA+TGG | - | chr4_1:44959216-44959235 | Msa0549760:intron | 15.0% |
| !! | TCTAAATAACAAAAGTAATA+TGG | + | chr4_1:44959283-44959302 | None:intergenic | 15.0% |
| !!! | AAAATGTAATTTTGGATTAT+AGG | - | chr4_1:44960313-44960332 | Msa0549760:intron | 15.0% |
| !!! | TTTTTCGTTTTATATGAAAT+TGG | - | chr4_1:44960619-44960638 | Msa0549760:intron | 15.0% |
| !!! | AAAGTATTCTTTTCAATATT+TGG | - | chr4_1:44961071-44961090 | Msa0549760:intron | 15.0% |
| !! | AATTAGATAATTGTAATAGT+TGG | - | chr4_1:44961443-44961462 | Msa0549760:CDS | 15.0% |
| !!! | ATTTATCGATTTTTTTAAAG+AGG | - | chr4_1:44962084-44962103 | Msa0549760:intron | 15.0% |
| !!! | TTTTAGTATATAATTGATCA+TGG | + | chr4_1:44962210-44962229 | None:intergenic | 15.0% |
| !! | TATGTAATGAGAACTAAAAA+GGG | + | chr4_1:44959085-44959104 | None:intergenic | 20.0% |
| !! | ATTAAGCTATTTATCAAAAC+AGG | - | chr4_1:44959257-44959276 | Msa0549760:intron | 20.0% |
| !! | ATAAAAGACTAAGATATGTT+TGG | + | chr4_1:44959655-44959674 | None:intergenic | 20.0% |
| !! | AAATTATTCAAGTCTATTGT+TGG | + | chr4_1:44960280-44960299 | None:intergenic | 20.0% |
| !! | AACAAAATAGCAAAACAATA+AGG | + | chr4_1:44960726-44960745 | None:intergenic | 20.0% |
| !!! | TTAATTTTGATAAGTTCTCT+AGG | - | chr4_1:44961262-44961281 | Msa0549760:CDS | 20.0% |
| !! | ATTAGCATATTGTCAAAATA+AGG | - | chr4_1:44961502-44961521 | Msa0549760:CDS | 20.0% |
| !! | AAATTACAAATTAAGTGCAA+AGG | - | chr4_1:44961536-44961555 | Msa0549760:CDS | 20.0% |
| !!! | AATGTTATTTGCTCATTTTT+AGG | + | chr4_1:44962162-44962181 | None:intergenic | 20.0% |
| !! | TAAAAATGAGCAAATAACAT+TGG | - | chr4_1:44962161-44962180 | Msa0549760:intron | 20.0% |
| !! | TATATAATTGATCATGGATA+AGG | + | chr4_1:44962204-44962223 | None:intergenic | 20.0% |
| !!! | TTTTGATCAATTGAAAGATA+TGG | - | chr4_1:44962242-44962261 | Msa0549760:intron | 20.0% |
| !! | TTTGATCAATTGAAAGATAT+GGG | - | chr4_1:44962243-44962262 | Msa0549760:intron | 20.0% |
| !!! | TTCACCATTGCTTTTTTAAT+GGG | - | chr4_1:44958991-44959010 | Msa0549760:exon | 25.0% |
| !!! | ATTGCTTTTTTAATGGGTTT+GGG | - | chr4_1:44958997-44959016 | Msa0549760:CDS | 25.0% |
| ! | CTATGTAATGAGAACTAAAA+AGG | + | chr4_1:44959086-44959105 | None:intergenic | 25.0% |
| !!! | CTTTTTAGTTCTCATTACAT+AGG | - | chr4_1:44959084-44959103 | Msa0549760:CDS | 25.0% |
| ! | GGGTGAACTTTAAATTATTA+TGG | - | chr4_1:44959345-44959364 | Msa0549760:intron | 25.0% |
| ! | GCTAACATATACTTATCATA+TGG | + | chr4_1:44959424-44959443 | None:intergenic | 25.0% |
| !! | TTTAGGTAAAAGTGTGTTTA+CGG | - | chr4_1:44959480-44959499 | Msa0549760:CDS | 25.0% |
| !!! | CGCATTTAAAATTGATTTTG+AGG | + | chr4_1:44959711-44959730 | None:intergenic | 25.0% |
| ! | TCACTAAAGACAAATTTCTA+TGG | - | chr4_1:44959736-44959755 | Msa0549760:CDS | 25.0% |
| !! | TAATTCTGGAAATAAAACTC+AGG | + | chr4_1:44959791-44959810 | None:intergenic | 25.0% |
| ! | AAATAGTTAAGTGTGAATCA+TGG | + | chr4_1:44960196-44960215 | None:intergenic | 25.0% |
| !! | TCTATGGATTATTATGAAAG+TGG | - | chr4_1:44960581-44960600 | Msa0549760:CDS | 25.0% |
| !! | CTATGGATTATTATGAAAGT+GGG | - | chr4_1:44960582-44960601 | Msa0549760:CDS | 25.0% |
| !! | TATGGATTATTATGAAAGTG+GGG | - | chr4_1:44960583-44960602 | Msa0549760:CDS | 25.0% |
| !! | ATATACACTTTGACTTATTC+TGG | + | chr4_1:44960682-44960701 | None:intergenic | 25.0% |
| !! | ATGTTTTCGATTTATGTTAC+AGG | - | chr4_1:44960754-44960773 | Msa0549760:intron | 25.0% |
| ! | TGATACCATCATATCTTAAA+GGG | + | chr4_1:44960859-44960878 | None:intergenic | 25.0% |
| ! | AATGGAGATAAGAAACTTTA+TGG | - | chr4_1:44960971-44960990 | Msa0549760:CDS | 25.0% |
| !! | AATGACTTTTAGGCTATATT+TGG | - | chr4_1:44961128-44961147 | Msa0549760:intron | 25.0% |
| ! | AGTGACATAAACAACTTATT+TGG | - | chr4_1:44961151-44961170 | Msa0549760:intron | 25.0% |
| ! | ATCGAATAAGCACTTAATTA+AGG | - | chr4_1:44961341-44961360 | Msa0549760:intron | 25.0% |
| !! | TAATTAAGGTATTCATCCAA+AGG | - | chr4_1:44961355-44961374 | Msa0549760:intron | 25.0% |
| ! | ATCAGATAATTGAAGTAGTT+AGG | - | chr4_1:44961407-44961426 | Msa0549760:intron | 25.0% |
| ! | TAGATAATTGTAATAGTTGG+AGG | - | chr4_1:44961446-44961465 | Msa0549760:CDS | 25.0% |
| ! | TAAATGAAAATAACCAGACT+TGG | + | chr4_1:44961829-44961848 | None:intergenic | 25.0% |
| ! | ATGATGATTCAACTATTTCA+GGG | + | chr4_1:44962363-44962382 | None:intergenic | 25.0% |
| ! | TGACATACAAACATACAAAT+TGG | - | chr4_1:44962513-44962532 | Msa0549760:CDS | 25.0% |
| !! | TTGAGAAGACATTGATTCAT+AGG | + | chr4_1:44958673-44958692 | None:intergenic | 30.0% |
| GTTCTGTTGAATTTGAACAA+GGG | + | chr4_1:44958712-44958731 | None:intergenic | 30.0% | |
| AGTTCTGTTGAATTTGAACA+AGG | + | chr4_1:44958713-44958732 | None:intergenic | 30.0% | |
| !!! | TATTCTTTCCCTTGTTTTTG+AGG | + | chr4_1:44958777-44958796 | None:intergenic | 30.0% |
| !!! | GTTCACCATTGCTTTTTTAA+TGG | - | chr4_1:44958990-44959009 | Msa0549760:exon | 30.0% |
| CAAACCCATTAAAAAAGCAA+TGG | + | chr4_1:44958998-44959017 | None:intergenic | 30.0% | |
| !!! | CATTGCTTTTTTAATGGGTT+TGG | - | chr4_1:44958996-44959015 | Msa0549760:CDS | 30.0% |
| ! | TAAGTATATGTTAGCTTCTG+TGG | - | chr4_1:44959429-44959448 | Msa0549760:CDS | 30.0% |
| ! | AATATTTTCACGTGAAAGTG+AGG | - | chr4_1:44959521-44959540 | Msa0549760:intron | 30.0% |
| AAAGACTAAGATATGTTTGG+TGG | + | chr4_1:44959652-44959671 | None:intergenic | 30.0% | |
| TAAAGACAAATTTCTATGGC+AGG | - | chr4_1:44959740-44959759 | Msa0549760:intron | 30.0% | |
| CAAGTAAAAAATCCTAACAC+AGG | + | chr4_1:44959827-44959846 | None:intergenic | 30.0% | |
| !!! | CTGTGTTAGGATTTTTTACT+TGG | - | chr4_1:44959825-44959844 | Msa0549760:intron | 30.0% |
| !!! | TAGGATTTTTTACTTGGAGA+TGG | - | chr4_1:44959831-44959850 | Msa0549760:intron | 30.0% |
| AATACATGTGATCAAAACCA+AGG | + | chr4_1:44959865-44959884 | None:intergenic | 30.0% | |
| ACCTATATTTCTTGCAATGT+TGG | - | chr4_1:44959889-44959908 | Msa0549760:intron | 30.0% | |
| ATCAAGGTTTCAAAAAGGTT+TGG | - | chr4_1:44959965-44959984 | Msa0549760:intron | 30.0% | |
| ! | TTTTCTGTGTTCATAATGCT+TGG | - | chr4_1:44960000-44960019 | Msa0549760:intron | 30.0% |
| ! | GCGCTAACAAAATGTAATTT+TGG | - | chr4_1:44960305-44960324 | Msa0549760:intron | 30.0% |
| GGATTATAGGTATTCTTGAA+AGG | - | chr4_1:44960326-44960345 | Msa0549760:intron | 30.0% | |
| GACATGAATCTCTGTATTAA+AGG | + | chr4_1:44960552-44960571 | None:intergenic | 30.0% | |
| GTGATACCATCATATCTTAA+AGG | + | chr4_1:44960860-44960879 | None:intergenic | 30.0% | |
| TTATCTCCATTGATCTTTAG+AGG | + | chr4_1:44960962-44960981 | None:intergenic | 30.0% | |
| ATATAGCCTAAAAGTCATTG+AGG | + | chr4_1:44961127-44961146 | None:intergenic | 30.0% | |
| GTCAATTGTCCTTTATGATA+AGG | - | chr4_1:44961680-44961699 | Msa0549760:intron | 30.0% | |
| ATTGTCCTTTATGATAAGGA+AGG | - | chr4_1:44961684-44961703 | Msa0549760:intron | 30.0% | |
| TTGTCCTTTATGATAAGGAA+GGG | - | chr4_1:44961685-44961704 | Msa0549760:intron | 30.0% | |
| ATTTCCCTTCCTTATCATAA+AGG | + | chr4_1:44961692-44961711 | None:intergenic | 30.0% | |
| TAACATAAGCATTAGGCAAT+AGG | + | chr4_1:44961884-44961903 | None:intergenic | 30.0% | |
| TCGATAAATGAAAGCAACAT+TGG | + | chr4_1:44962073-44962092 | None:intergenic | 30.0% | |
| GATGATGATTCAACTATTTC+AGG | + | chr4_1:44962364-44962383 | None:intergenic | 30.0% | |
| !!! | TTATAGCTTTTGAGACATCA+AGG | - | chr4_1:44962421-44962440 | Msa0549760:CDS | 30.0% |
| GGAAATAAAGACTCTTCAAT+TGG | - | chr4_1:44962446-44962465 | Msa0549760:CDS | 30.0% | |
| ATGAAGTATATAGCAATGAC+AGG | - | chr4_1:44962484-44962503 | Msa0549760:CDS | 30.0% | |
| TGAAGTATATAGCAATGACA+GGG | - | chr4_1:44962485-44962504 | Msa0549760:CDS | 30.0% | |
| ! | TCAATCAACAAAACTTTTGC+AGG | - | chr4_1:44962550-44962569 | Msa0549760:CDS | 30.0% |
| ACAAGATATAAGAAGAGCTT+TGG | + | chr4_1:44962640-44962659 | None:intergenic | 30.0% | |
| !!! | ATTATTTTTGCCCCTGATTT+AGG | - | chr4_1:44962660-44962679 | Msa0549760:CDS | 30.0% |
| !!! | TTATTTTTGCCCCTGATTTA+GGG | - | chr4_1:44962661-44962680 | Msa0549760:CDS | 30.0% |
| CAACTGCAAACTTTACATTA+TGG | + | chr4_1:44962709-44962728 | None:intergenic | 30.0% | |
| AGTTTCAGTTTCCAGTTTGA+GGG | + | chr4_1:44958606-44958625 | None:intergenic | 35.0% | |
| TTGAACAAGGGATGAAAAGT+GGG | + | chr4_1:44958700-44958719 | None:intergenic | 35.0% | |
| TTTGAACAAGGGATGAAAAG+TGG | + | chr4_1:44958701-44958720 | None:intergenic | 35.0% | |
| AACTGCAACCTCAAAAACAA+GGG | - | chr4_1:44958766-44958785 | Msa0549760:three_prime_UTR | 35.0% | |
| GAGAATGATGATATCAACAG+TGG | - | chr4_1:44958856-44958875 | Msa0549760:three_prime_UTR | 35.0% | |
| GGTCAAGAAGTTGAGTAAAA+AGG | - | chr4_1:44958924-44958943 | Msa0549760:three_prime_UTR | 35.0% | |
| ! | GATTCTCTCTAATTTGCCTT+TGG | - | chr4_1:44958954-44958973 | Msa0549760:three_prime_UTR | 35.0% |
| ! | TCTAATTTGCCTTTGGCTAT+TGG | - | chr4_1:44958961-44958980 | Msa0549760:three_prime_UTR | 35.0% |
| AACATTTCTCCAATAGCCAA+AGG | + | chr4_1:44958973-44958992 | None:intergenic | 35.0% | |
| TCCTCAAGTTTGTGAATTGT+GGG | - | chr4_1:44959325-44959344 | Msa0549760:intron | 35.0% | |
| AGTCTAAAAATCACGATCGA+AGG | - | chr4_1:44959559-44959578 | Msa0549760:intron | 35.0% | |
| GATGATCTTCAAGGTAATTC+TGG | + | chr4_1:44959805-44959824 | None:intergenic | 35.0% | |
| GCCAACATTGCAAGAAATAT+AGG | + | chr4_1:44959893-44959912 | None:intergenic | 35.0% | |
| !!! | CTTTTTGAAACCTTGATGAG+TGG | + | chr4_1:44959962-44959981 | None:intergenic | 35.0% |
| CACTCATCAAGGTTTCAAAA+AGG | - | chr4_1:44959960-44959979 | Msa0549760:intron | 35.0% | |
| ! | GGTTTCAAAAAGGTTTGGTT+TGG | - | chr4_1:44959970-44959989 | Msa0549760:intron | 35.0% |
| GACCATCTACGAAACAAATA+AGG | + | chr4_1:44960053-44960072 | None:intergenic | 35.0% | |
| !! | TTAATATAGTACCGACGTCT+TGG | + | chr4_1:44960142-44960161 | None:intergenic | 35.0% |
| AGACGTCGGTACTATATTAA+TGG | - | chr4_1:44960142-44960161 | Msa0549760:intron | 35.0% | |
| GACGTCGGTACTATATTAAT+GGG | - | chr4_1:44960143-44960162 | Msa0549760:intron | 35.0% | |
| ! | TATAGCACTGCTGTTGATAA+TGG | - | chr4_1:44960406-44960425 | Msa0549760:CDS | 35.0% |
| !! | ATAGCACTGCTGTTGATAAT+GGG | - | chr4_1:44960407-44960426 | Msa0549760:CDS | 35.0% |
| ! | TTTGTTGTAGGAGATGTTCT+CGG | - | chr4_1:44960494-44960513 | Msa0549760:CDS | 35.0% |
| !! | ATTAAAGGCATCAGTTGGAA+AGG | + | chr4_1:44960537-44960556 | None:intergenic | 35.0% |
| !! | TCTGTATTAAAGGCATCAGT+TGG | + | chr4_1:44960542-44960561 | None:intergenic | 35.0% |
| TCATGTCAACAGATTCTCTA+TGG | - | chr4_1:44960565-44960584 | Msa0549760:CDS | 35.0% | |
| ! | TTTTCCATCCATGTTCAAGA+GGG | + | chr4_1:44960804-44960823 | None:intergenic | 35.0% |
| TGGATGGAAAAGAAGTAATG+AGG | - | chr4_1:44960813-44960832 | Msa0549760:CDS | 35.0% | |
| !! | AACGACCCTTTAAGATATGA+TGG | - | chr4_1:44960851-44960870 | Msa0549760:CDS | 35.0% |
| CAAATTCTCAAGGACAATGA+AGG | - | chr4_1:44960914-44960933 | Msa0549760:CDS | 35.0% | |
| CAATGAAGGACCTTATAACT+TGG | - | chr4_1:44960928-44960947 | Msa0549760:CDS | 35.0% | |
| ! | TATGGTACTTTTCTACCTGT+TGG | - | chr4_1:44960989-44961008 | Msa0549760:CDS | 35.0% |
| TGTTAACTCTCCTGATGTTA+AGG | - | chr4_1:44961015-44961034 | Msa0549760:CDS | 35.0% | |
| GTTAACTCTCCTGATGTTAA+GGG | - | chr4_1:44961016-44961035 | Msa0549760:CDS | 35.0% | |
| ACTTACATTCCCTTAACATC+AGG | + | chr4_1:44961028-44961047 | None:intergenic | 35.0% | |
| !! | AAGCTTTGAAAACTGTTCCT+AGG | - | chr4_1:44961094-44961113 | Msa0549760:intron | 35.0% |
| ! | GCATTTCCTCAATGACTTTT+AGG | - | chr4_1:44961118-44961137 | Msa0549760:intron | 35.0% |
| !! | CACCTAAAGAGTATTTACGA+AGG | - | chr4_1:44961193-44961212 | Msa0549760:intron | 35.0% |
| AGCCTTCGTAAATACTCTTT+AGG | + | chr4_1:44961198-44961217 | None:intergenic | 35.0% | |
| TATCAAGTCCTAGCCTATAA+TGG | + | chr4_1:44961566-44961585 | None:intergenic | 35.0% | |
| ATTATAGGCTAGGACTTGAT+AGG | - | chr4_1:44961565-44961584 | Msa0549760:CDS | 35.0% | |
| !! | TTGATTGGGAGCTTTGAATT+AGG | + | chr4_1:44961732-44961751 | None:intergenic | 35.0% |
| ATTGTCGTTGTTGATGCAAT+AGG | - | chr4_1:44961768-44961787 | Msa0549760:intron | 35.0% | |
| TTGTCGTTGTTGATGCAATA+GGG | - | chr4_1:44961769-44961788 | Msa0549760:intron | 35.0% | |
| CAGCTATTTATCTCATTCAC+AGG | - | chr4_1:44961971-44961990 | Msa0549760:intron | 35.0% | |
| TTATGCATATGGCATTTGTC+TGG | + | chr4_1:44962129-44962148 | None:intergenic | 35.0% | |
| AAGATATGGGCTTTACAAGA+TGG | - | chr4_1:44962256-44962275 | Msa0549760:intron | 35.0% | |
| AGATATGGGCTTTACAAGAT+GGG | - | chr4_1:44962257-44962276 | Msa0549760:intron | 35.0% | |
| ATCTAAGCAAACTGATAGCA+TGG | - | chr4_1:44962387-44962406 | Msa0549760:intron | 35.0% | |
| AACATACAAATTGGATGCCA+TGG | - | chr4_1:44962522-44962541 | Msa0549760:CDS | 35.0% | |
| ! | TTTGTTGATTGACTCATCCA+TGG | + | chr4_1:44962542-44962561 | None:intergenic | 35.0% |
| ! | ATAAGAAGAGCTTTGGTATC+TGG | + | chr4_1:44962633-44962652 | None:intergenic | 35.0% |
| TATTCACTTCCCTAAATCAG+GGG | + | chr4_1:44962673-44962692 | None:intergenic | 35.0% | |
| GTATTCACTTCCCTAAATCA+GGG | + | chr4_1:44962674-44962693 | None:intergenic | 35.0% | |
| AGTATTCACTTCCCTAAATC+AGG | + | chr4_1:44962675-44962694 | None:intergenic | 35.0% | |
| ! | AAAGAGACGCGATTTTTATG+TGG | + | chr4_1:44962735-44962754 | None:intergenic | 35.0% |
| CAGTTTCAGTTTCCAGTTTG+AGG | + | chr4_1:44958607-44958626 | None:intergenic | 40.0% | |
| TGTGTCACATGATGTCTTTG+AGG | - | chr4_1:44958644-44958663 | Msa0549760:three_prime_UTR | 40.0% | |
| !!! | GTTTTTGAGGTTGCAGTTGA+TGG | + | chr4_1:44958764-44958783 | None:intergenic | 40.0% |
| CAACTGCAACCTCAAAAACA+AGG | - | chr4_1:44958765-44958784 | Msa0549760:three_prime_UTR | 40.0% | |
| AAGAACCAGAAAGGTCCTTA+TGG | - | chr4_1:44958898-44958917 | Msa0549760:three_prime_UTR | 40.0% | |
| AACTTCTTGACCACACCATA+AGG | + | chr4_1:44958916-44958935 | None:intergenic | 40.0% | |
| AGTCTCACAAGTGTTTACGT+CGG | + | chr4_1:44959143-44959162 | None:intergenic | 40.0% | |
| CTCCTCAAGTTTGTGAATTG+TGG | - | chr4_1:44959324-44959343 | Msa0549760:intron | 40.0% | |
| ACCCACAATTCACAAACTTG+AGG | + | chr4_1:44959329-44959348 | None:intergenic | 40.0% | |
| CTAACACAGGATGATCTTCA+AGG | + | chr4_1:44959814-44959833 | None:intergenic | 40.0% | |
| CTTGAAGATCATCCTGTGTT+AGG | - | chr4_1:44959812-44959831 | Msa0549760:intron | 40.0% | |
| !! | TGGAGATGGATTTTCTTCCT+TGG | - | chr4_1:44959845-44959864 | Msa0549760:intron | 40.0% |
| TATAAGGGATGCACCAAGAA+GGG | + | chr4_1:44959915-44959934 | None:intergenic | 40.0% | |
| TGTGTAAGTGCAGGCTATAA+GGG | + | chr4_1:44959930-44959949 | None:intergenic | 40.0% | |
| TTGTGTAAGTGCAGGCTATA+AGG | + | chr4_1:44959931-44959950 | None:intergenic | 40.0% | |
| AAGTTGTGTTGTGTAAGTGC+AGG | + | chr4_1:44959939-44959958 | None:intergenic | 40.0% | |
| AACACAACTTCCACTCATCA+AGG | - | chr4_1:44959949-44959968 | Msa0549760:intron | 40.0% | |
| CGACATTTCTTGATCACTGA+GGG | - | chr4_1:44960027-44960046 | Msa0549760:intron | 40.0% | |
| !! | GGCCTTATTTGTTTCGTAGA+TGG | - | chr4_1:44960048-44960067 | Msa0549760:intron | 40.0% |
| GGTACTATATTAATGGGAGC+TGG | - | chr4_1:44960149-44960168 | Msa0549760:intron | 40.0% | |
| ATTAATGGGAGCTGGATATG+AGG | - | chr4_1:44960157-44960176 | Msa0549760:intron | 40.0% | |
| ! | CCACGAAAAGCATACAAAGT+TGG | + | chr4_1:44960353-44960372 | None:intergenic | 40.0% |
| ! | CCAACTTTGTATGCTTTTCG+TGG | - | chr4_1:44960350-44960369 | Msa0549760:intron | 40.0% |
| ACAACAAAATTCAGACCCTG+AGG | + | chr4_1:44960482-44960501 | None:intergenic | 40.0% | |
| !! | CAGGGTCTGAATTTTGTTGT+AGG | - | chr4_1:44960482-44960501 | Msa0549760:CDS | 40.0% |
| AGTTGGAAAGGAAAGAAAGC+CGG | + | chr4_1:44960525-44960544 | None:intergenic | 40.0% | |
| GGATTATTATGAAAGTGGGG+AGG | - | chr4_1:44960586-44960605 | Msa0549760:CDS | 40.0% | |
| CATGTTCAAGAGGGAAAGAT+CGG | + | chr4_1:44960795-44960814 | None:intergenic | 40.0% | |
| ! | CTTTTCCATCCATGTTCAAG+AGG | + | chr4_1:44960805-44960824 | None:intergenic | 40.0% |
| TGGTATCACCATATACCAGA+CGG | - | chr4_1:44960871-44960890 | Msa0549760:CDS | 40.0% | |
| TTCAGCTCTGCAAATTCTCA+AGG | - | chr4_1:44960904-44960923 | Msa0549760:CDS | 40.0% | |
| AGGACCTTATAACTTGGCTA+TGG | - | chr4_1:44960934-44960953 | Msa0549760:CDS | 40.0% | |
| ! | ATGGCACCTCTAAAGATCAA+TGG | - | chr4_1:44960953-44960972 | Msa0549760:CDS | 40.0% |
| ! | AGAGTATTTACGAAGGCTTG+TGG | - | chr4_1:44961200-44961219 | Msa0549760:intron | 40.0% |
| TCATTCACTAAGGACTCCTT+TGG | + | chr4_1:44961374-44961393 | None:intergenic | 40.0% | |
| AGGAGTCCTTAGTGAATGAT+TGG | - | chr4_1:44961375-44961394 | Msa0549760:intron | 40.0% | |
| GGAGTCCTTAGTGAATGATT+GGG | - | chr4_1:44961376-44961395 | Msa0549760:intron | 40.0% | |
| GAGTCCTTAGTGAATGATTG+GGG | - | chr4_1:44961377-44961396 | Msa0549760:intron | 40.0% | |
| AGTCCTTAGTGAATGATTGG+GGG | - | chr4_1:44961378-44961397 | Msa0549760:intron | 40.0% | |
| GTGCAAAGGACTACCATTAT+AGG | - | chr4_1:44961550-44961569 | Msa0549760:CDS | 40.0% | |
| AAGGACTACCATTATAGGCT+AGG | - | chr4_1:44961555-44961574 | Msa0549760:CDS | 40.0% | |
| TAGGACTTGATAGGTCATTC+TGG | - | chr4_1:44961574-44961593 | Msa0549760:CDS | 40.0% | |
| CATAAAGGACAATTGACTGC+AGG | + | chr4_1:44961677-44961696 | None:intergenic | 40.0% | |
| GATAAGGAAGGGAAATTTGC+AGG | - | chr4_1:44961696-44961715 | Msa0549760:intron | 40.0% | |
| AAGCTCCCAATCAACATTGA+TGG | - | chr4_1:44961738-44961757 | Msa0549760:intron | 40.0% | |
| ! | CTGAGCCATCAATGTTGATT+GGG | + | chr4_1:44961746-44961765 | None:intergenic | 40.0% |
| TCTGAGCCATCAATGTTGAT+TGG | + | chr4_1:44961747-44961766 | None:intergenic | 40.0% | |
| GTCTGCGTAACATAAGCATT+AGG | + | chr4_1:44961891-44961910 | None:intergenic | 40.0% | |
| CCAAATCCAGCATATACAAC+TGG | + | chr4_1:44961927-44961946 | None:intergenic | 40.0% | |
| CCAGTTGTATATGCTGGATT+TGG | - | chr4_1:44961924-44961943 | Msa0549760:intron | 40.0% | |
| GCGTCGTCTAATTATGCATA+TGG | + | chr4_1:44962140-44962159 | None:intergenic | 40.0% | |
| CAGAGCAAAGTTAGAGTTTC+CGG | - | chr4_1:44962309-44962328 | Msa0549760:intron | 40.0% | |
| !!! | TAGCTTTTGAGACATCAAGG+TGG | - | chr4_1:44962424-44962443 | Msa0549760:CDS | 40.0% |
| !!! | AGCTTTTGAGACATCAAGGT+GGG | - | chr4_1:44962425-44962444 | Msa0549760:CDS | 40.0% |
| TTGAACGATAGTGTCGTCAA+TGG | - | chr4_1:44962784-44962803 | Msa0549760:five_prime_UTR | 40.0% | |
| !! | GCAGTTGATGGTGAATGAGA+GGG | + | chr4_1:44958752-44958771 | None:intergenic | 45.0% |
| !! | TGCAGTTGATGGTGAATGAG+AGG | + | chr4_1:44958753-44958772 | None:intergenic | 45.0% |
| TCATCATTCTCCTGTGTGAG+TGG | + | chr4_1:44958847-44958866 | None:intergenic | 45.0% | |
| !! | TTCTGGTTCTTTGAGCTTGC+TGG | + | chr4_1:44958889-44958908 | None:intergenic | 45.0% |
| GCAAGCTCAAAGAACCAGAA+AGG | - | chr4_1:44958889-44958908 | Msa0549760:three_prime_UTR | 45.0% | |
| ! | GCAGGCACTTTTATTGACCA+AGG | - | chr4_1:44959758-44959777 | Msa0549760:intron | 45.0% |
| AAAACTCAGGTTTCTCGCCT+TGG | + | chr4_1:44959778-44959797 | None:intergenic | 45.0% | |
| CTATAAGGGATGCACCAAGA+AGG | + | chr4_1:44959916-44959935 | None:intergenic | 45.0% | |
| GCGACATTTCTTGATCACTG+AGG | - | chr4_1:44960026-44960045 | Msa0549760:intron | 45.0% | |
| GTCATTTATGCACTCTGCTG+AGG | - | chr4_1:44960070-44960089 | Msa0549760:intron | 45.0% | |
| ACGTCTTGGATTGATGCTCT+TGG | + | chr4_1:44960128-44960147 | None:intergenic | 45.0% | |
| ! | AGAGCATCAATCCAAGACGT+CGG | - | chr4_1:44960128-44960147 | Msa0549760:intron | 45.0% |
| ! | TATGCTTTTCGTGGACTTGC+CGG | - | chr4_1:44960359-44960378 | Msa0549760:intron | 45.0% |
| AGTGCTATATGAACGCCAAC+AGG | + | chr4_1:44960395-44960414 | None:intergenic | 45.0% | |
| CGATCTTTCCCTCTTGAACA+TGG | - | chr4_1:44960793-44960812 | Msa0549760:intron | 45.0% | |
| CTTTCCCTCTTGAACATGGA+TGG | - | chr4_1:44960797-44960816 | Msa0549760:intron | 45.0% | |
| TCACCATATACCAGACGGAT+TGG | - | chr4_1:44960876-44960895 | Msa0549760:CDS | 45.0% | |
| ACTCCAATCCGTCTGGTATA+TGG | + | chr4_1:44960882-44960901 | None:intergenic | 45.0% | |
| CTGAAATACTCCAATCCGTC+TGG | + | chr4_1:44960889-44960908 | None:intergenic | 45.0% | |
| ! | GGTGCCATAGCCAAGTTATA+AGG | + | chr4_1:44960941-44960960 | None:intergenic | 45.0% |
| GGAGAGTTAACATCTCCAAC+AGG | + | chr4_1:44961007-44961026 | None:intergenic | 45.0% | |
| GTCATTGAGGAAATGCTCCT+AGG | + | chr4_1:44961114-44961133 | None:intergenic | 45.0% | |
| TCTCCCCCAATCATTCACTA+AGG | + | chr4_1:44961384-44961403 | None:intergenic | 45.0% | |
| GTTGATGCAATAGGGAGTAG+TGG | - | chr4_1:44961777-44961796 | Msa0549760:intron | 45.0% | |
| GTGTGAGATTAAGCCAAGTC+TGG | - | chr4_1:44961813-44961832 | Msa0549760:intron | 45.0% | |
| AGGCAATAGGTCAGTGACAA+AGG | + | chr4_1:44961871-44961890 | None:intergenic | 45.0% | |
| CATATACAACTGGCACACCA+GGG | + | chr4_1:44961917-44961936 | None:intergenic | 45.0% | |
| GATGGGACAACAGTCGTTAT+TGG | - | chr4_1:44962274-44962293 | Msa0549760:intron | 45.0% | |
| GGACAACAGTCGTTATTGGA+GGG | - | chr4_1:44962278-44962297 | Msa0549760:intron | 45.0% | |
| ! | CAGGGATTTTGTCAAGCAAG+AGG | + | chr4_1:44962345-44962364 | None:intergenic | 45.0% |
| TCATTCTCCTGTGTGAGTGG+TGG | + | chr4_1:44958844-44958863 | None:intergenic | 50.0% | |
| CCACACCATAAGGACCTTTC+TGG | + | chr4_1:44958906-44958925 | None:intergenic | 50.0% | |
| CCAGAAAGGTCCTTATGGTG+TGG | - | chr4_1:44958903-44958922 | Msa0549760:three_prime_UTR | 50.0% | |
| CTTGCAATGTTGGCCCTTCT+TGG | - | chr4_1:44959899-44959918 | Msa0549760:intron | 50.0% | |
| !! | GCACTGCTGTTGATAATGGG+TGG | - | chr4_1:44960410-44960429 | Msa0549760:CDS | 50.0% |
| !! | CTGCTGTTGATAATGGGTGG+AGG | - | chr4_1:44960413-44960432 | Msa0549760:CDS | 50.0% |
| GAGGAACGTTAAGTGCAGCA+GGG | - | chr4_1:44960432-44960451 | Msa0549760:CDS | 50.0% | |
| ! | AGTGCAGCAGGGAGCTTTAA+AGG | - | chr4_1:44960443-44960462 | Msa0549760:CDS | 50.0% |
| GGAAAGGAAAGAAAGCCGGT+AGG | + | chr4_1:44960521-44960540 | None:intergenic | 50.0% | |
| TGCAATAGGGAGTAGTGGCT+TGG | - | chr4_1:44961782-44961801 | Msa0549760:intron | 50.0% | |
| ! | GAGTAGTGGCTTGGACTTGA+AGG | - | chr4_1:44961791-44961810 | Msa0549760:intron | 50.0% |
| TATGTTACGCAGACTGACCC+TGG | - | chr4_1:44961897-44961916 | Msa0549760:intron | 50.0% | |
| GCATATACAACTGGCACACC+AGG | + | chr4_1:44961918-44961937 | None:intergenic | 50.0% | |
| GGTGTGCCAGTTGTATATGC+TGG | - | chr4_1:44961918-44961937 | Msa0549760:intron | 50.0% | |
| GGGACAACAGTCGTTATTGG+AGG | - | chr4_1:44962277-44962296 | Msa0549760:intron | 50.0% | |
| AGCAAGAGGTTCATCTCGTC+CGG | + | chr4_1:44962331-44962350 | None:intergenic | 50.0% | |
| TTCACCTCCACCACTCACAC+AGG | - | chr4_1:44958834-44958853 | Msa0549760:three_prime_UTR | 55.0% | |
| TTCTCCTGTGTGAGTGGTGG+AGG | + | chr4_1:44958841-44958860 | None:intergenic | 55.0% | |
| ! | CTTTTCGTGGACTTGCCGGT+CGG | - | chr4_1:44960363-44960382 | Msa0549760:intron | 55.0% |
| GGAGGAACGTTAAGTGCAGC+AGG | - | chr4_1:44960431-44960450 | Msa0549760:CDS | 55.0% | |
| AGGTTCAGTCACTGTGCCTC+AGG | - | chr4_1:44960463-44960482 | Msa0549760:CDS | 55.0% | |
| GGTTCAGTCACTGTGCCTCA+GGG | - | chr4_1:44960464-44960483 | Msa0549760:CDS | 55.0% | |
| GGAGATGTTCTCGGTCCTAC+CGG | - | chr4_1:44960503-44960522 | Msa0549760:CDS | 55.0% | |
| GCCAACAGGAGCTAGCCGAC+CGG | + | chr4_1:44960381-44960400 | None:intergenic | 65.0% | |
| ! | GCCGGTCGGCTAGCTCCTGT+TGG | - | chr4_1:44960377-44960396 | Msa0549760:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 44958593 | 44962819 | 44958593 | ID=Msa0549760;Name=Msa0549760 |
| chr4_1 | mRNA | 44958593 | 44962819 | 44958593 | ID=Msa0549760-mRNA-1;Parent=Msa0549760;Name=Msa0549760-mRNA-1;_AED=0.08;_eAED=0.08;_QI=50|1|1|1|1|1|8|402|548 |
| chr4_1 | exon | 44958593 | 44959153 | 44958593 | ID=Msa0549760-mRNA-1:exon:11783;Parent=Msa0549760-mRNA-1 |
| chr4_1 | exon | 44959420 | 44959503 | 44959420 | ID=Msa0549760-mRNA-1:exon:11782;Parent=Msa0549760-mRNA-1 |
| chr4_1 | exon | 44959600 | 44959756 | 44959600 | ID=Msa0549760-mRNA-1:exon:11781;Parent=Msa0549760-mRNA-1 |
| chr4_1 | exon | 44960371 | 44960636 | 44960371 | ID=Msa0549760-mRNA-1:exon:11780;Parent=Msa0549760-mRNA-1 |
| chr4_1 | exon | 44960805 | 44961077 | 44960805 | ID=Msa0549760-mRNA-1:exon:11779;Parent=Msa0549760-mRNA-1 |
| chr4_1 | exon | 44961234 | 44961345 | 44961234 | ID=Msa0549760-mRNA-1:exon:11778;Parent=Msa0549760-mRNA-1 |
| chr4_1 | exon | 44961431 | 44961650 | 44961431 | ID=Msa0549760-mRNA-1:exon:11777;Parent=Msa0549760-mRNA-1 |
| chr4_1 | exon | 44962394 | 44962819 | 44962394 | ID=Msa0549760-mRNA-1:exon:11776;Parent=Msa0549760-mRNA-1 |
| chr4_1 | five_prime_UTR | 44962770 | 44962819 | 44962770 | ID=Msa0549760-mRNA-1:five_prime_utr;Parent=Msa0549760-mRNA-1 |
| chr4_1 | CDS | 44962394 | 44962769 | 44962394 | ID=Msa0549760-mRNA-1:cds;Parent=Msa0549760-mRNA-1 |
| chr4_1 | CDS | 44961431 | 44961650 | 44961431 | ID=Msa0549760-mRNA-1:cds;Parent=Msa0549760-mRNA-1 |
| chr4_1 | CDS | 44961234 | 44961345 | 44961234 | ID=Msa0549760-mRNA-1:cds;Parent=Msa0549760-mRNA-1 |
| chr4_1 | CDS | 44960805 | 44961077 | 44960805 | ID=Msa0549760-mRNA-1:cds;Parent=Msa0549760-mRNA-1 |
| chr4_1 | CDS | 44960371 | 44960636 | 44960371 | ID=Msa0549760-mRNA-1:cds;Parent=Msa0549760-mRNA-1 |
| chr4_1 | CDS | 44959600 | 44959756 | 44959600 | ID=Msa0549760-mRNA-1:cds;Parent=Msa0549760-mRNA-1 |
| chr4_1 | CDS | 44959420 | 44959503 | 44959420 | ID=Msa0549760-mRNA-1:cds;Parent=Msa0549760-mRNA-1 |
| chr4_1 | CDS | 44958995 | 44959153 | 44958995 | ID=Msa0549760-mRNA-1:cds;Parent=Msa0549760-mRNA-1 |
| chr4_1 | three_prime_UTR | 44958593 | 44958994 | 44958593 | ID=Msa0549760-mRNA-1:three_prime_utr;Parent=Msa0549760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
