AlfalfaGEDB | Msa0634420

M. sativa cultivar zhongmu-4 / Msa0634420

KEGG: -
GO: GO:0000003 GO:0000902 GO:0000904 GO:0001101 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0006649 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009505 GO:0009506 GO:0009507 GO:0009534 GO:0009536 GO:0009579 GO:0009628 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009889 GO:0009987 GO:0010026 GO:0010035 GO:0010154 GO:0010556 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016049 GO:0019222 GO:0022412 GO:0022414 GO:0030054 GO:0030154 GO:0030312 GO:0031410 GO:0031976 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0033036 GO:0040007 GO:0042221 GO:0042335 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0060255 GO:0060560 GO:0061024 GO:0061458 GO:0065007 GO:0071702 GO:0071840 GO:0071944 GO:0090376 GO:0090378 GO:0090558 GO:0090627 GO:0097708 GO:0098791 GO:1901700 GO:1901957
PFAM: PF00234.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0634420	XP_039688822.1	86.916	107	14	0	1	107	1	107	1.84e-58	186

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0634420	sp\|A0AT31\|NLTP5_LENCU	74.286	105	27	0	3	107	4	108	8.36e-51	159

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003470	Msa0634420	0.803539	3.321186e-49	-8.615850e-47
Msa0008330	Msa0634420	0.830987	2.154936e-55	-8.615850e-47
Msa0008850	Msa0634420	0.807756	4.327870e-50	-8.615850e-47
Msa0017120	Msa0634420	0.814695	1.351395e-51	-8.615850e-47
Msa0038310	Msa0634420	0.809264	2.061808e-50	-8.615850e-47
Msa0057260	Msa0634420	0.841030	6.085110e-58	-8.615850e-47
Msa0060600	Msa0634420	0.801902	7.232105e-49	-8.615850e-47
Msa0065390	Msa0634420	0.814741	1.320007e-51	-8.615850e-47
Msa0074230	Msa0634420	0.806312	8.745161e-50	-8.615850e-47
Msa0086090	Msa0634420	0.820733	5.867823e-53	-8.615850e-47
Msa0103780	Msa0634420	0.801950	7.067816e-49	-8.615850e-47
Msa0110710	Msa0634420	0.818225	2.190033e-52	-8.615850e-47
Msa0607280	Msa0634420	0.809133	2.199287e-50	-8.615850e-47
Msa0610280	Msa0634420	0.809369	1.957958e-50	-8.615850e-47
Msa0614230	Msa0634420	0.828788	7.400829e-55	-8.615850e-47
Msa0630970	Msa0634420	0.815390	9.473388e-52	-8.615850e-47
Msa0633860	Msa0634420	0.906556	1.307328e-80	-8.615850e-47
Msa0634270	Msa0634420	0.851000	1.180077e-60	-8.615850e-47
Msa0634420	Msa0638710	0.830301	3.171568e-55	-8.615850e-47
Msa0634420	Msa0640880	0.803719	3.047988e-49	-8.615850e-47
Msa0634420	Msa0654060	0.808140	3.584734e-50	-8.615850e-47
Msa0634420	Msa0660820	0.825880	3.682978e-54	-8.615850e-47
Msa0634420	Msa0665910	-0.804770	1.841305e-49	-8.615850e-47
Msa0634420	Msa0674320	0.806376	8.479066e-50	-8.615850e-47
Msa0634420	Msa0686610	0.802350	5.849558e-49	-8.615850e-47
Msa0634420	Msa0703460	0.809282	2.044177e-50	-8.615850e-47
Msa0634420	Msa0719340	0.805981	1.026747e-49	-8.615850e-47
Msa0634420	Msa0720270	0.804350	2.253447e-49	-8.615850e-47
Msa0634420	Msa0738850	0.814346	1.614640e-51	-8.615850e-47
Msa0634420	Msa0738860	0.840594	7.912930e-58	-8.615850e-47
Msa0634420	Msa0738870	0.856430	3.235620e-62	-8.615850e-47
Msa0634420	Msa0758820	0.823830	1.121426e-53	-8.615850e-47
Msa0634420	Msa0772150	0.804973	1.669915e-49	-8.615850e-47
Msa0634420	Msa0783270	0.818195	2.225084e-52	-8.615850e-47
Msa0634420	Msa0803130	0.805696	1.178516e-49	-8.615850e-47
Msa0634420	Msa0819330	0.848446	6.096486e-60	-8.615850e-47
Msa0634420	Msa0819360	0.831618	1.506935e-55	-8.615850e-47
Msa0634420	Msa0838660	0.847130	1.404457e-59	-8.615850e-47
Msa0634420	Msa0841490	0.805815	1.112486e-49	-8.615850e-47
Msa0634420	Msa0859520	0.859989	2.823329e-63	-8.615850e-47
Msa0634420	Msa0859530	0.841595	4.319510e-58	-8.615850e-47
Msa0634420	Msa0877420	0.800843	1.191564e-48	-8.615850e-47
Msa0634420	Msa0931480	0.843152	1.670381e-58	-8.615850e-47
Msa0634420	Msa0955310	0.831660	1.471536e-55	-8.615850e-47
Msa0634420	Msa0978000	0.800872	1.175402e-48	-8.615850e-47
Msa0634420	Msa0987350	0.803102	4.090984e-49	-8.615850e-47
Msa0634420	Msa1030870	0.804411	2.188531e-49	-8.615850e-47
Msa0634420	Msa1044040	0.803907	2.785731e-49	-8.615850e-47
Msa0634420	Msa1115580	0.813053	3.109339e-51	-8.615850e-47
Msa0634420	Msa1116140	0.827747	1.318559e-54	-8.615850e-47
Msa0634420	Msa1162560	0.810566	1.081454e-50	-8.615850e-47
Msa0634420	Msa1190820	0.815765	7.818800e-52	-8.615850e-47
Msa0634420	Msa1198450	0.848622	5.449277e-60	-8.615850e-47
Msa0634420	Msa1200920	0.803672	3.118178e-49	-8.615850e-47
Msa0634420	Msa1220740	0.833024	6.761198e-56	-8.615850e-47
Msa0634420	Msa1229640	0.837929	3.888800e-57	-8.615850e-47
Msa0634420	Msa1258810	0.829164	6.000691e-55	-8.615850e-47
Msa0634420	Msa1272340	0.813258	2.803815e-51	-8.615850e-47
Msa0634420	Msa1284030	0.833940	3.996219e-56	-8.615850e-47
Msa0634420	Msa1302150	0.801951	7.064795e-49	-8.615850e-47
Msa0634420	Msa1302780	0.820446	6.831551e-53	-8.615850e-47
Msa0634420	Msa1310250	0.812884	3.387032e-51	-8.615850e-47
Msa0634420	Msa1323060	0.821480	3.947954e-53	-8.615850e-47
Msa0634420	Msa1327820	0.807399	5.151818e-50	-8.615850e-47
Msa0634420	Msa1330240	0.824446	8.034968e-54	-8.615850e-47
Msa0634420	Msa1334650	0.823584	1.280457e-53	-8.615850e-47
Msa0634420	Msa1347030	0.935649	6.082396e-97	-8.615850e-47
Msa0634420	Msa1382720	0.802421	5.654437e-49	-8.615850e-47
Msa0122180	Msa0634420	0.810214	1.288645e-50	-8.615850e-47
Msa0132620	Msa0634420	0.825138	5.518945e-54	-8.615850e-47
Msa0141670	Msa0634420	0.813259	2.801695e-51	-8.615850e-47
Msa0157020	Msa0634420	0.822280	2.577395e-53	-8.615850e-47
Msa0216210	Msa0634420	0.800354	1.499089e-48	-8.615850e-47
Msa0230400	Msa0634420	0.814747	1.315837e-51	-8.615850e-47
Msa0378340	Msa0634420	0.803136	4.025465e-49	-8.615850e-47
Msa0421800	Msa0634420	0.810206	1.293245e-50	-8.615850e-47
Msa0427690	Msa0634420	0.801044	1.083923e-48	-8.615850e-47
Msa0274780	Msa0634420	0.824711	6.961440e-54	-8.615850e-47
Msa0315480	Msa0634420	0.808646	2.795448e-50	-8.615850e-47
Msa0514260	Msa0634420	0.806101	9.686627e-50	-8.615850e-47
Msa0518520	Msa0634420	0.801222	9.968851e-49	-8.615850e-47
Msa0519200	Msa0634420	0.801763	7.723324e-49	-8.615850e-47
Msa0534420	Msa0634420	0.826800	2.223796e-54	-8.615850e-47
Msa0537860	Msa0634420	0.861980	7.003323e-64	-8.615850e-47
Msa0537870	Msa0634420	0.922963	4.955128e-89	-8.615850e-47
Msa0537880	Msa0634420	0.914431	1.932286e-84	-8.615850e-47
Msa0538260	Msa0634420	0.927334	1.359229e-91	-8.615850e-47
Msa0538270	Msa0634420	0.961587	7.089738e-120	-8.615850e-47
Msa0538570	Msa0634420	0.840288	9.516509e-58	-8.615850e-47
Msa0540340	Msa0634420	0.829573	4.772363e-55	-8.615850e-47
Msa0561510	Msa0634420	0.812224	4.721722e-51	-8.615850e-47
Msa0577870	Msa0634420	0.807936	3.961096e-50	-8.615850e-47
Msa0594180	Msa0634420	0.843546	1.311076e-58	-8.615850e-47
Msa0594390	Msa0634420	0.832574	8.745919e-56	-8.615850e-47
Msa0596080	Msa0634420	0.809559	1.782714e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0634420	MtrunA17_Chr4g0012961	86.916	107	14	0	1	107	1	107	1.69e-62	186
Msa0634420	MtrunA17_Chr4g0012991	86.916	107	14	0	1	107	56	162	3.13e-62	187
Msa0634420	MtrunA17_Chr4g0013001	85.981	107	15	0	1	107	1	107	8.58e-62	184
Msa0634420	MtrunA17_Chr4g0012951	81.308	107	20	0	1	107	1	107	4.75e-59	177
Msa0634420	MtrunA17_Chr4g0013261	63.303	109	37	2	1	107	1	108	1.01e-41	134
Msa0634420	MtrunA17_Chr4g0013251	63.303	109	37	2	1	107	1	108	7.59e-41	131
Msa0634420	MtrunA17_Chr4g0013211	47.273	110	58	0	1	110	1	110	5.97e-31	106
Msa0634420	MtrunA17_Chr7g0244691	46.789	109	55	2	4	110	7	114	7.35e-30	103
Msa0634420	MtrunA17_Chr4g0012901	47.664	107	54	2	1	105	5	111	3.36e-28	99.8
Msa0634420	MtrunA17_Chr7g0244841	44.037	109	57	3	4	110	7	113	1.93e-26	95.1
Msa0634420	MtrunA17_Chr7g0244831	46.078	102	51	3	12	110	14	114	2.29e-26	95.1
Msa0634420	MtrunA17_Chr7g0244641	39.450	109	64	2	4	110	7	115	4.32e-25	91.7
Msa0634420	MtrunA17_Chr7g0244671	37.615	109	66	1	4	110	7	115	5.28e-24	89.7
Msa0634420	MtrunA17_Chr4g0012931	40.708	113	64	1	1	110	1	113	1.07e-23	88.6
Msa0634420	MtrunA17_Chr4g0012891	39.823	113	61	3	5	110	9	121	1.94e-22	85.1
Msa0634420	MtrunA17_Chr2g0309241	42.056	107	60	2	1	106	1	106	7.97e-22	83.2
Msa0634420	MtrunA17_Chr7g0244811	39.806	103	60	1	1	101	5	107	9.14e-22	83.6
Msa0634420	MtrunA17_Chr7g0244741	40.909	110	62	1	4	110	7	116	2.88e-20	79.7
Msa0634420	MtrunA17_Chr4g0012921	40.708	113	64	2	1	110	1	113	1.70e-19	77.4
Msa0634420	MtrunA17_Chr7g0244681	41.284	109	61	2	4	110	7	114	1.91e-19	77.4
Msa0634420	MtrunA17_Chr7g0244721	35.780	109	68	1	4	110	7	115	3.02e-17	71.6
Msa0634420	MtrunA17_Chr7g0233431	31.193	109	74	1	5	112	20	128	5.16e-17	71.6
Msa0634420	MtrunA17_Chr3g0107481	37.255	102	63	1	5	105	3	104	5.61e-17	70.9
Msa0634420	MtrunA17_Chr1g0165761	41.667	108	60	2	5	110	8	114	2.91e-16	69.3
Msa0634420	MtrunA17_Chr7g0244821	37.615	109	64	4	4	110	7	113	3.63e-16	69.3
Msa0634420	MtrunA17_Chr7g0244761	37.615	109	65	3	4	110	32	139	4.33e-16	69.3
Msa0634420	MtrunA17_Chr7g0244791	36.036	111	64	2	4	110	12	119	1.94e-15	67.4
Msa0634420	MtrunA17_Chr7g0244661	38.739	111	60	3	4	112	7	111	1.62e-14	64.7
Msa0634420	MtrunA17_Chr3g0105001	35.185	108	62	4	4	104	7	113	3.14e-13	61.6
Msa0634420	MtrunA17_Chr7g0244751	33.333	108	71	1	4	110	7	114	3.77e-13	61.2
Msa0634420	MtrunA17_Chr3g0104971	35.514	107	61	4	4	103	7	112	6.53e-13	60.8
Msa0634420	MtrunA17_Chr3g0104981	35.185	108	62	4	4	104	7	113	6.88e-13	60.5
Msa0634420	MtrunA17_Chr3g0105021	37.255	102	56	4	9	103	12	112	7.66e-13	60.5
Msa0634420	MtrunA17_Chr3g0105011	37.255	102	56	4	9	103	12	112	7.66e-13	60.5
Msa0634420	MtrunA17_Chr3g0095931	31.683	101	63	3	10	105	13	112	1.67e-12	59.7
Msa0634420	MtrunA17_Chr3g0104991	37.255	102	56	4	9	103	12	112	1.71e-12	59.7
Msa0634420	MtrunA17_Chr3g0104951	34.579	107	62	4	4	103	7	112	1.84e-12	59.7
Msa0634420	MtrunA17_Chr3g0104931	34.579	107	62	4	4	103	7	112	1.84e-12	59.7
Msa0634420	MtrunA17_Chr3g0104941	34.579	107	62	4	4	103	7	112	1.84e-12	59.7
Msa0634420	MtrunA17_Chr3g0104921	35.922	103	58	4	9	104	2	103	2.42e-12	58.9
Msa0634420	MtrunA17_Chr3g0104911	35.922	103	58	4	9	104	2	103	2.42e-12	58.9
Msa0634420	MtrunA17_Chr3g0105031	36.190	105	59	4	9	106	2	105	3.87e-12	58.5
Msa0634420	MtrunA17_Chr3g0104901	34.513	113	63	5	1	103	1	112	4.03e-12	58.5
Msa0634420	MtrunA17_Chr7g0244731	48.529	68	32	2	25	90	57	123	4.79e-12	59.3
Msa0634420	MtrunA17_Chr3g0105041	34.579	107	62	4	4	103	7	112	6.18e-12	58.2
Msa0634420	MtrunA17_Chr3g0104961	34.259	108	63	4	4	104	7	113	1.17e-11	57.4
Msa0634420	MtrunA17_Chr3g0095991	31.776	107	65	4	4	103	7	112	1.44e-11	57.0
Msa0634420	MtrunA17_Chr3g0101431	35.714	98	57	3	9	101	11	107	2.64e-11	56.6
Msa0634420	MtrunA17_Chr3g0095951	31.776	107	65	4	4	103	7	112	4.09e-11	55.8
Msa0634420	MtrunA17_Chr3g0096021	31.776	107	65	4	4	103	7	112	4.70e-11	55.8
Msa0634420	MtrunA17_Chr3g0096031	31.776	107	65	4	4	103	7	112	7.28e-11	55.5
Msa0634420	MtrunA17_Chr7g0244651	30.973	113	74	2	4	112	7	119	9.69e-11	55.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0634420	AT5G59320.1	57.576	99	40	1	8	106	10	106	7.45e-33	111
Msa0634420	AT2G38540.1	60.185	108	37	6	4	107	5	110	1.69e-31	108
Msa0634420	AT5G59310.1	55.000	100	40	2	8	107	10	104	1.10e-29	103
Msa0634420	AT2G38530.1	57.009	107	42	4	4	107	5	110	4.17e-28	99.8
Msa0634420	AT3G51600.1	50.467	107	49	4	4	107	5	110	4.85e-25	92.0
Msa0634420	AT2G15050.3	45.192	104	53	3	4	103	5	108	1.12e-24	91.3
Msa0634420	AT2G15050.2	45.192	104	53	3	4	103	5	108	1.51e-24	90.5
Msa0634420	AT2G15050.1	45.192	104	53	3	4	103	5	108	1.80e-24	90.9
Msa0634420	AT4G33355.1	55.128	78	35	0	24	101	28	105	2.45e-23	87.8
Msa0634420	AT4G33355.2	55.128	78	35	0	24	101	28	105	2.48e-23	87.8
Msa0634420	AT3G51590.1	43.137	102	55	3	6	106	8	107	1.01e-22	86.3
Msa0634420	AT5G01870.1	40.777	103	55	2	9	105	4	106	1.27e-20	80.5
Msa0634420	AT3G08770.1	42.553	94	50	3	22	112	18	110	1.06e-16	70.5
Msa0634420	AT3G08770.2	42.553	94	50	3	22	112	18	110	1.45e-16	70.5
Msa0634420	AT2G18370.1	40.449	89	51	2	15	102	16	103	1.01e-15	68.2

Find 40 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTGCTGCTGGTGCTATTTC+TGG	0.136175	4_3:-21624909	Msa0634420:CDS
GGTGGAGGCTCGTGCTATTA+TGG	0.316778	4_3:-21624289	Msa0634420:three_prime_UTR
ACTTAAAATTTCCATAACTT+TGG	0.352472	4_3:+21624353	None:intergenic
CCATGCATTGGATATCTTAG+AGG	0.354250	4_3:-21625032	Msa0634420:CDS
GCTATTTCTGGTTTGAATAC+AGG	0.359485	4_3:-21624897	Msa0634420:CDS
TTGCAAGCAGCCTGGCGGTC+AGG	0.369068	4_3:+21624942	None:intergenic
TATCCTCTTACCAGACTTGT+TGG	0.411234	4_3:-21624263	Msa0634420:three_prime_UTR
GTCAGGCGTGGTGGTGGCGG+CGG	0.430334	4_3:+21624959	None:intergenic
GCGGTCAGGCGTGGTGGTGG+CGG	0.445777	4_3:+21624956	None:intergenic
CTGGCGGTCAGGCGTGGTGG+TGG	0.447269	4_3:+21624953	None:intergenic
CACCACCACGCCTGACCGCC+AGG	0.460254	4_3:-21624952	Msa0634420:CDS
GTGCATGATTGTTGCACCTA+TGG	0.467928	4_3:-21625099	Msa0634420:CDS
GGTGCTCTTTCTCCATGCAT+TGG	0.474474	4_3:-21625044	Msa0634420:CDS
ATATTGCAGCTCCAAAGTTA+TGG	0.477723	4_3:-21624364	Msa0634420:CDS
AGCAGCCTGGCGGTCAGGCG+TGG	0.477818	4_3:+21624947	None:intergenic
AACTGCTTGAAAAGTGCTGC+TGG	0.486030	4_3:-21624921	Msa0634420:CDS
TCAAGCAGTTGCAAGCAGCC+TGG	0.486116	4_3:+21624934	None:intergenic
TCTTCTCTCCCTGGCAAATG+TGG	0.490642	4_3:-21624867	Msa0634420:CDS
TTCACTCCACCACAGCATGC+TGG	0.495886	4_3:+21624993	None:intergenic
GGATATCTTAGAGGTGGTGC+TGG	0.504129	4_3:-21625023	Msa0634420:CDS
GTGGAGGTACTGATCTTGTA+AGG	0.508470	4_3:+21624834	None:intergenic
ATTCATACAACGACACAGTA+AGG	0.510083	4_3:+21624231	None:intergenic
GAAGGGCTATCCAACAAGTC+TGG	0.512364	4_3:+21624253	None:intergenic
ATGTTAACACCACATTTGCC+AGG	0.518576	4_3:+21624858	None:intergenic
GGCGCAGCTTCTTCTCTCCC+TGG	0.542091	4_3:-21624876	Msa0634420:CDS
CCACCACAGCATGCTGGAGA+TGG	0.543598	4_3:+21624999	None:intergenic
CCATCTCCAGCATGCTGTGG+TGG	0.550747	4_3:-21624999	Msa0634420:CDS
TATCCAACAAGTCTGGTAAG+AGG	0.557039	4_3:+21624260	None:intergenic
GGTCCATCTCCAGCATGCTG+TGG	0.560551	4_3:-21625002	Msa0634420:CDS
AGCCTGGCGGTCAGGCGTGG+TGG	0.562191	4_3:+21624950	None:intergenic
GAGATTGCAGCATCTGCCAT+AGG	0.577723	4_3:+21625083	None:intergenic
ATACAACGACACAGTAAGGA+AGG	0.581492	4_3:+21624235	None:intergenic
TGGTCATATTTACAGCATCA+GGG	0.592414	4_3:-21624397	Msa0634420:intron
CCTCTAAGATATCCAATGCA+TGG	0.598915	4_3:+21625032	None:intergenic
TGCATTGGATATCTTAGAGG+TGG	0.623803	4_3:-21625029	Msa0634420:CDS
TGTTAACACCACATTTGCCA+GGG	0.642773	4_3:+21624859	None:intergenic
AGCAGTTGCAAGCAGCCTGG+CGG	0.651296	4_3:+21624937	None:intergenic
GCAGATGCTGCAATCTCATG+TGG	0.654132	4_3:-21625077	Msa0634420:CDS
TACAACGACACAGTAAGGAA+GGG	0.665352	4_3:+21624236	None:intergenic
ATCTCATGTGGACAAGTGAG+TGG	0.724614	4_3:-21625065	Msa0634420:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTTTTATTTATTTTTT+TGG	+	chr4_3:21624641-21624660	None:intergenic	0.0%
!!!	TTTTTTTTTATTTATTTTTT+TGG	+	chr4_3:21624641-21624660	None:intergenic	0.0%
!!!	GTTGCTAATTTTTTTTTTGT+TGG	-	chr4_3:21624920-21624939	Msa0634420:CDS	20.0%
!!	ACTTAAAATTTCCATAACTT+TGG	+	chr4_3:21624987-21625006	None:intergenic	20.0%
!!	ATTAAGAATAAAAATGAGAG+TGG	-	chr4_3:21625027-21625046	Msa0634420:CDS	20.0%
!!!	ACGTAGTGAAATATTTTAAT+CGG	-	chr4_3:21625136-21625155	Msa0634420:CDS	20.0%
!!!	GTTGCTAATTTTTTTTTTGT+TGG	-	chr4_3:21624920-21624939	Msa0634420:CDS	20.0%
!!	ACTTAAAATTTCCATAACTT+TGG	+	chr4_3:21624987-21625006	None:intergenic	20.0%
!!	ATTAAGAATAAAAATGAGAG+TGG	-	chr4_3:21625027-21625046	Msa0634420:CDS	20.0%
!!!	ACGTAGTGAAATATTTTAAT+CGG	-	chr4_3:21625136-21625155	Msa0634420:CDS	20.0%
!	TTAAATTAGTCCACCTAAAA+TGG	-	chr4_3:21624613-21624632	Msa0634420:intron	25.0%
!!!	TATTTTTTTGGTGCCATTTT+AGG	+	chr4_3:21624629-21624648	None:intergenic	25.0%
!!!	CGTAGTGAAATATTTTAATC+GGG	-	chr4_3:21625137-21625156	Msa0634420:CDS	25.0%
!	TTAAATTAGTCCACCTAAAA+TGG	-	chr4_3:21624613-21624632	Msa0634420:intron	25.0%
!!!	TATTTTTTTGGTGCCATTTT+AGG	+	chr4_3:21624629-21624648	None:intergenic	25.0%
	AAGAATAAAAATGAGAGTGG+TGG	-	chr4_3:21625030-21625049	Msa0634420:CDS	30.0%
	AAGAATAAAAATGAGAGTGG+TGG	-	chr4_3:21625030-21625049	Msa0634420:CDS	30.0%
!!	GCTATTTCTGGTTTGAATAC+AGG	-	chr4_3:21624440-21624459	Msa0634420:intron	35.0%
!!!	TTTTTTGGTGCCATTTTAGG+TGG	+	chr4_3:21624626-21624645	None:intergenic	35.0%
	TTGGTCATATTTACAGCATC+AGG	-	chr4_3:21624939-21624958	Msa0634420:CDS	35.0%
	TGGTCATATTTACAGCATCA+GGG	-	chr4_3:21624940-21624959	Msa0634420:CDS	35.0%
	ATATTGCAGCTCCAAAGTTA+TGG	-	chr4_3:21624973-21624992	Msa0634420:CDS	35.0%
	AATAAAAATGAGAGTGGTGG+AGG	-	chr4_3:21625033-21625052	Msa0634420:CDS	35.0%
	ATTCATACAACGACACAGTA+AGG	+	chr4_3:21625109-21625128	None:intergenic	35.0%
!!	GCTATTTCTGGTTTGAATAC+AGG	-	chr4_3:21624440-21624459	Msa0634420:intron	35.0%
!!!	TTTTTTGGTGCCATTTTAGG+TGG	+	chr4_3:21624626-21624645	None:intergenic	35.0%
	TTGGTCATATTTACAGCATC+AGG	-	chr4_3:21624939-21624958	Msa0634420:CDS	35.0%
	TGGTCATATTTACAGCATCA+GGG	-	chr4_3:21624940-21624959	Msa0634420:CDS	35.0%
	ATATTGCAGCTCCAAAGTTA+TGG	-	chr4_3:21624973-21624992	Msa0634420:CDS	35.0%
	AATAAAAATGAGAGTGGTGG+AGG	-	chr4_3:21625033-21625052	Msa0634420:CDS	35.0%
	ATTCATACAACGACACAGTA+AGG	+	chr4_3:21625109-21625128	None:intergenic	35.0%
!!	CCTCTAAGATATCCAATGCA+TGG	+	chr4_3:21624308-21624327	None:intergenic	40.0%
	CCATGCATTGGATATCTTAG+AGG	-	chr4_3:21624305-21624324	Msa0634420:three_prime_UTR	40.0%
	TGCATTGGATATCTTAGAGG+TGG	-	chr4_3:21624308-21624327	Msa0634420:three_prime_UTR	40.0%
	TGTTAACACCACATTTGCCA+GGG	+	chr4_3:21624481-21624500	None:intergenic	40.0%
	ATGTTAACACCACATTTGCC+AGG	+	chr4_3:21624482-21624501	None:intergenic	40.0%
	ATGAACATACGTAGCACAGT+TGG	+	chr4_3:21624528-21624547	None:intergenic	40.0%
	TATCCTCTTACCAGACTTGT+TGG	-	chr4_3:21625074-21625093	Msa0634420:CDS	40.0%
	TATCCAACAAGTCTGGTAAG+AGG	+	chr4_3:21625080-21625099	None:intergenic	40.0%
	TACAACGACACAGTAAGGAA+GGG	+	chr4_3:21625104-21625123	None:intergenic	40.0%
	ATACAACGACACAGTAAGGA+AGG	+	chr4_3:21625105-21625124	None:intergenic	40.0%
!!	CCTCTAAGATATCCAATGCA+TGG	+	chr4_3:21624308-21624327	None:intergenic	40.0%
	CCATGCATTGGATATCTTAG+AGG	-	chr4_3:21624305-21624324	Msa0634420:three_prime_UTR	40.0%
	TGCATTGGATATCTTAGAGG+TGG	-	chr4_3:21624308-21624327	Msa0634420:three_prime_UTR	40.0%
	TGTTAACACCACATTTGCCA+GGG	+	chr4_3:21624481-21624500	None:intergenic	40.0%
	ATGTTAACACCACATTTGCC+AGG	+	chr4_3:21624482-21624501	None:intergenic	40.0%
	ATGAACATACGTAGCACAGT+TGG	+	chr4_3:21624528-21624547	None:intergenic	40.0%
	TATCCTCTTACCAGACTTGT+TGG	-	chr4_3:21625074-21625093	Msa0634420:CDS	40.0%
	TATCCAACAAGTCTGGTAAG+AGG	+	chr4_3:21625080-21625099	None:intergenic	40.0%
	TACAACGACACAGTAAGGAA+GGG	+	chr4_3:21625104-21625123	None:intergenic	40.0%
	ATACAACGACACAGTAAGGA+AGG	+	chr4_3:21625105-21625124	None:intergenic	40.0%
	GTGCATGATTGTTGCACCTA+TGG	-	chr4_3:21624238-21624257	Msa0634420:three_prime_UTR	45.0%
	ATCTCATGTGGACAAGTGAG+TGG	-	chr4_3:21624272-21624291	Msa0634420:three_prime_UTR	45.0%
!!	AACTGCTTGAAAAGTGCTGC+TGG	-	chr4_3:21624416-21624435	Msa0634420:intron	45.0%
!!	GTGGAGGTACTGATCTTGTA+AGG	+	chr4_3:21624506-21624525	None:intergenic	45.0%
	AACATACGTAGCACAGTTGG+TGG	+	chr4_3:21624525-21624544	None:intergenic	45.0%
	GTGCATGATTGTTGCACCTA+TGG	-	chr4_3:21624238-21624257	Msa0634420:three_prime_UTR	45.0%
	ATCTCATGTGGACAAGTGAG+TGG	-	chr4_3:21624272-21624291	Msa0634420:three_prime_UTR	45.0%
!!	AACTGCTTGAAAAGTGCTGC+TGG	-	chr4_3:21624416-21624435	Msa0634420:intron	45.0%
!!	GTGGAGGTACTGATCTTGTA+AGG	+	chr4_3:21624506-21624525	None:intergenic	45.0%
	AACATACGTAGCACAGTTGG+TGG	+	chr4_3:21624525-21624544	None:intergenic	45.0%
!!!	AATTTCATTATTTTAATTTT+TGG	-	chr4_3:21624721-21624740	Msa0634420:intron	5.0%
!!!	AATTTCATTATTTTAATTTT+TGG	-	chr4_3:21624721-21624740	Msa0634420:intron	5.0%
	GAGATTGCAGCATCTGCCAT+AGG	+	chr4_3:21624257-21624276	None:intergenic	50.0%
	GCAGATGCTGCAATCTCATG+TGG	-	chr4_3:21624260-21624279	Msa0634420:three_prime_UTR	50.0%
	GGTGCTCTTTCTCCATGCAT+TGG	-	chr4_3:21624293-21624312	Msa0634420:three_prime_UTR	50.0%
	GGATATCTTAGAGGTGGTGC+TGG	-	chr4_3:21624314-21624333	Msa0634420:three_prime_UTR	50.0%
!!	AGTGCTGCTGGTGCTATTTC+TGG	-	chr4_3:21624428-21624447	Msa0634420:intron	50.0%
	TCTTCTCTCCCTGGCAAATG+TGG	-	chr4_3:21624470-21624489	Msa0634420:intron	50.0%
!!	ATACGTAGCACAGTTGGTGG+AGG	+	chr4_3:21624522-21624541	None:intergenic	50.0%
	GAAGGGCTATCCAACAAGTC+TGG	+	chr4_3:21625087-21625106	None:intergenic	50.0%
	GAGATTGCAGCATCTGCCAT+AGG	+	chr4_3:21624257-21624276	None:intergenic	50.0%
	GCAGATGCTGCAATCTCATG+TGG	-	chr4_3:21624260-21624279	Msa0634420:three_prime_UTR	50.0%
	GGTGCTCTTTCTCCATGCAT+TGG	-	chr4_3:21624293-21624312	Msa0634420:three_prime_UTR	50.0%
	GGATATCTTAGAGGTGGTGC+TGG	-	chr4_3:21624314-21624333	Msa0634420:three_prime_UTR	50.0%
!!	AGTGCTGCTGGTGCTATTTC+TGG	-	chr4_3:21624428-21624447	Msa0634420:intron	50.0%
	TCTTCTCTCCCTGGCAAATG+TGG	-	chr4_3:21624470-21624489	Msa0634420:intron	50.0%
!!	ATACGTAGCACAGTTGGTGG+AGG	+	chr4_3:21624522-21624541	None:intergenic	50.0%
	GAAGGGCTATCCAACAAGTC+TGG	+	chr4_3:21625087-21625106	None:intergenic	50.0%
	TTCACTCCACCACAGCATGC+TGG	+	chr4_3:21624347-21624366	None:intergenic	55.0%
	TCAAGCAGTTGCAAGCAGCC+TGG	+	chr4_3:21624406-21624425	None:intergenic	55.0%
!	GGTGGAGGCTCGTGCTATTA+TGG	-	chr4_3:21625048-21625067	Msa0634420:CDS	55.0%
	TTCACTCCACCACAGCATGC+TGG	+	chr4_3:21624347-21624366	None:intergenic	55.0%
	TCAAGCAGTTGCAAGCAGCC+TGG	+	chr4_3:21624406-21624425	None:intergenic	55.0%
!	GGTGGAGGCTCGTGCTATTA+TGG	-	chr4_3:21625048-21625067	Msa0634420:CDS	55.0%
	GGTCCATCTCCAGCATGCTG+TGG	-	chr4_3:21624335-21624354	Msa0634420:three_prime_UTR	60.0%
	CCACCACAGCATGCTGGAGA+TGG	+	chr4_3:21624341-21624360	None:intergenic	60.0%
	CCATCTCCAGCATGCTGTGG+TGG	-	chr4_3:21624338-21624357	Msa0634420:exon	60.0%
	AGCAGTTGCAAGCAGCCTGG+CGG	+	chr4_3:21624403-21624422	None:intergenic	60.0%
	GGTCCATCTCCAGCATGCTG+TGG	-	chr4_3:21624335-21624354	Msa0634420:three_prime_UTR	60.0%
	CCACCACAGCATGCTGGAGA+TGG	+	chr4_3:21624341-21624360	None:intergenic	60.0%
	CCATCTCCAGCATGCTGTGG+TGG	-	chr4_3:21624338-21624357	Msa0634420:exon	60.0%
	AGCAGTTGCAAGCAGCCTGG+CGG	+	chr4_3:21624403-21624422	None:intergenic	60.0%
	TTGCAAGCAGCCTGGCGGTC+AGG	+	chr4_3:21624398-21624417	None:intergenic	65.0%
	GGCGCAGCTTCTTCTCTCCC+TGG	-	chr4_3:21624461-21624480	Msa0634420:intron	65.0%
	TTGCAAGCAGCCTGGCGGTC+AGG	+	chr4_3:21624398-21624417	None:intergenic	65.0%
	GGCGCAGCTTCTTCTCTCCC+TGG	-	chr4_3:21624461-21624480	Msa0634420:intron	65.0%
!!	GTCAGGCGTGGTGGTGGCGG+CGG	+	chr4_3:21624381-21624400	None:intergenic	75.0%
!!	GCGGTCAGGCGTGGTGGTGG+CGG	+	chr4_3:21624384-21624403	None:intergenic	75.0%
	CTGGCGGTCAGGCGTGGTGG+TGG	+	chr4_3:21624387-21624406	None:intergenic	75.0%
	CACCACCACGCCTGACCGCC+AGG	-	chr4_3:21624385-21624404	Msa0634420:CDS	75.0%
	AGCCTGGCGGTCAGGCGTGG+TGG	+	chr4_3:21624390-21624409	None:intergenic	75.0%
	AGCAGCCTGGCGGTCAGGCG+TGG	+	chr4_3:21624393-21624412	None:intergenic	75.0%
!!	GTCAGGCGTGGTGGTGGCGG+CGG	+	chr4_3:21624381-21624400	None:intergenic	75.0%
!!	GCGGTCAGGCGTGGTGGTGG+CGG	+	chr4_3:21624384-21624403	None:intergenic	75.0%
	CTGGCGGTCAGGCGTGGTGG+TGG	+	chr4_3:21624387-21624406	None:intergenic	75.0%
	CACCACCACGCCTGACCGCC+AGG	-	chr4_3:21624385-21624404	Msa0634420:CDS	75.0%
	AGCCTGGCGGTCAGGCGTGG+TGG	+	chr4_3:21624390-21624409	None:intergenic	75.0%
	AGCAGCCTGGCGGTCAGGCG+TGG	+	chr4_3:21624393-21624412	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	21624200	21625159	21624200	ID=Msa0634420;Name=Msa0634420
chr4_3	mRNA	21624200	21625159	21624200	ID=Msa0634420-mRNA-1;Parent=Msa0634420;Name=Msa0634420-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0\|0\|0.5\|1\|1\|1\|2\|155\|121
chr4_3	exon	21624200	21624404	21624200	ID=Msa0634420-mRNA-1:exon:5620;Parent=Msa0634420-mRNA-1
chr4_3	exon	21624844	21625159	21624844	ID=Msa0634420-mRNA-1:exon:5619;Parent=Msa0634420-mRNA-1
chr4_3	CDS	21624844	21625159	21624844	ID=Msa0634420-mRNA-1:cds;Parent=Msa0634420-mRNA-1
chr4_3	CDS	21624355	21624404	21624355	ID=Msa0634420-mRNA-1:cds;Parent=Msa0634420-mRNA-1
chr4_3	three_prime_UTR	21624200	21624354	21624200	ID=Msa0634420-mRNA-1:three_prime_utr;Parent=Msa0634420-mRNA-1

Gene Sequence	>Msa0634420 ATGGCAAACATGAAGGTAGCATGTGTTGTTTTGATGATGTGCATGATTGTTGCACCTATGGCAGATGCTGCAATCTCATGTGGACAAGTGAGTGGTGCTCTTTCTCCATGCATTGGATATCTTAGAGGTGGTGCTGGTCCATCTCCAGCATGCTGTGGTGGAGTGAAGAGACTTAACGCCGCCGCCACCACCACGCCTGACCGCCAGGCTGCTTGCAACTGCTTGAAAAGTGCTGCTGGTGCTATTTCTGGTTTGAATACAGGCGCAGCTTCTTCTCTCCCTGGCAAATGTGGTGTTAACATTCCTTACAAGATCACATCAGGGCTTGAAGATGATATTGCAGCTCCAAAGTTATGGAAATTTTAA
Protein sequence	>Msa0634420 MANMKVACVVLMMCMIVAPMADAAISCGQVSGALSPCIGYLRGGAGPSPACCGGVKRLNAAATTTPDRQAACNCLKSAAGAISGLNTGAASSLPGKCGVNIPYKITSGLEDDIAAPKLWKF*