AlfalfaGEDB | Msa1329980

M. sativa cultivar zhongmu-4 / Msa1329980

KEGG: K09391
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006355 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0019219 GO:0019222 GO:0022402 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032875 GO:0032876 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045786 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051252 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1903506 GO:2000104 GO:2000112 GO:2000113 GO:2001141
PFAM: PF02319.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1329980	XP_024636098.1	97.973	296	5	1	28	322	69	364	0.0	596

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1329980	sp\|Q8LSZ4\|E2FE_ARATH	49.026	308	119	13	28	320	86	370	1.82e-67	219

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1329980	G7JNS5	97.973	296	5	1	28	322	69	364	0.0	596

TFs/TRs:

Gene ID	Type	Classification
Msa1329980	TF	E2F-DP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000050	Msa1329980	0.827835	1.255801e-54	-8.615850e-47
Msa0001940	Msa1329980	0.815914	7.240790e-52	-8.615850e-47
Msa0017950	Msa1329980	0.820917	5.323677e-53	-8.615850e-47
Msa0027280	Msa1329980	0.808691	2.734304e-50	-8.615850e-47
Msa0034810	Msa1329980	0.829392	5.281574e-55	-8.615850e-47
Msa0094780	Msa1329980	0.819100	1.386955e-52	-8.615850e-47
Msa0611210	Msa1329980	0.812829	3.482020e-51	-8.615850e-47
Msa0624900	Msa1329980	0.817076	3.977703e-52	-8.615850e-47
Msa0651550	Msa1329980	0.801558	8.507680e-49	-8.615850e-47
Msa0795870	Msa1329980	0.840565	8.056525e-58	-8.615850e-47
Msa0829300	Msa1329980	0.806272	8.914999e-50	-8.615850e-47
Msa0829330	Msa1329980	0.801324	9.502141e-49	-8.615850e-47
Msa0833650	Msa1329980	0.845927	2.991715e-59	-8.615850e-47
Msa0133150	Msa1329980	0.801192	1.010892e-48	-8.615850e-47
Msa0133280	Msa1329980	0.813936	1.988699e-51	-8.615850e-47
Msa0173690	Msa1329980	0.815954	7.093302e-52	-8.615850e-47
Msa0175750	Msa1329980	0.804279	2.331793e-49	-8.615850e-47
Msa0178560	Msa1329980	0.804981	1.663638e-49	-8.615850e-47
Msa0221000	Msa1329980	0.804333	2.271296e-49	-8.615850e-47
Msa0223080	Msa1329980	0.831958	1.242610e-55	-8.615850e-47
Msa0225100	Msa1329980	0.818178	2.245021e-52	-8.615850e-47
Msa0225860	Msa1329980	0.833196	6.128133e-56	-8.615850e-47
Msa0237210	Msa1329980	0.818236	2.177464e-52	-8.615850e-47
Msa1225860	Msa1329980	-0.802766	4.800306e-49	-8.615850e-47
Msa1228200	Msa1329980	0.821918	3.126332e-53	-8.615850e-47
Msa1297230	Msa1329980	0.816955	4.234822e-52	-8.615850e-47
Msa1320670	Msa1329980	0.805739	1.153946e-49	-8.615850e-47
Msa1321550	Msa1329980	0.810853	9.373447e-51	-8.615850e-47
Msa1329980	Msa1343430	0.808478	3.036133e-50	-8.615850e-47
Msa1329980	Msa1372040	0.802429	5.634088e-49	-8.615850e-47
Msa1329980	Msa1373100	0.811958	5.395518e-51	-8.615850e-47
Msa1329980	Msa1397400	0.814936	1.194828e-51	-8.615850e-47
Msa1329980	Msa1405930	0.802540	5.346207e-49	-8.615850e-47
Msa1329980	Msa1422950	0.812376	4.374314e-51	-8.615850e-47
Msa1329980	Msa1425880	0.810629	1.048423e-50	-8.615850e-47
Msa1329980	Msa1434220	0.800160	1.641954e-48	-8.615850e-47
Msa1329980	Msa1440310	0.822945	1.804924e-53	-8.615850e-47
Msa1329980	Msa1440880	0.838000	3.729457e-57	-8.615850e-47
Msa1329980	Msa1446820	0.820386	7.051725e-53	-8.615850e-47
Msa1329980	Msa1451160	0.812475	4.161552e-51	-8.615850e-47
Msa1071180	Msa1329980	-0.821167	4.663572e-53	-8.615850e-47
Msa1078170	Msa1329980	0.809577	1.766252e-50	-8.615850e-47
Msa1085260	Msa1329980	0.804528	2.069075e-49	-8.615850e-47
Msa1103990	Msa1329980	0.810080	1.377245e-50	-8.615850e-47
Msa0244640	Msa1329980	0.828675	7.879754e-55	-8.615850e-47
Msa0260510	Msa1329980	0.806070	9.835368e-50	-8.615850e-47
Msa0287740	Msa1329980	0.824475	7.910418e-54	-8.615850e-47
Msa0298470	Msa1329980	0.819902	9.102046e-53	-8.615850e-47
Msa0300270	Msa1329980	0.813148	2.964508e-51	-8.615850e-47
Msa0302160	Msa1329980	0.826100	3.265040e-54	-8.615850e-47
Msa0310850	Msa1329980	0.805378	1.373915e-49	-8.615850e-47
Msa0315690	Msa1329980	0.821751	3.417841e-53	-8.615850e-47
Msa0321620	Msa1329980	0.807640	4.578614e-50	-8.615850e-47
Msa0330380	Msa1329980	0.808561	2.915270e-50	-8.615850e-47
Msa0337700	Msa1329980	0.832695	8.161367e-56	-8.615850e-47
Msa0339490	Msa1329980	0.824975	6.031418e-54	-8.615850e-47
Msa0340500	Msa1329980	0.825087	5.673698e-54	-8.615850e-47
Msa0358890	Msa1329980	0.806828	6.806624e-50	-8.615850e-47
Msa0361910	Msa1329980	0.808197	3.485674e-50	-8.615850e-47
Msa1132840	Msa1329980	0.845444	4.046458e-59	-8.615850e-47
Msa1155170	Msa1329980	-0.821897	3.161790e-53	-8.615850e-47
Msa1170670	Msa1329980	0.805214	1.487169e-49	-8.615850e-47
Msa1186020	Msa1329980	0.851427	8.936850e-61	-8.615850e-47
Msa1193170	Msa1329980	0.801980	6.970613e-49	-8.615850e-47
Msa1208950	Msa1329980	0.809294	2.031814e-50	-8.615850e-47
Msa1218450	Msa1329980	0.805815	1.112312e-49	-8.615850e-47
Msa0483100	Msa1329980	0.809842	1.549592e-50	-8.615850e-47
Msa0534720	Msa1329980	0.838271	3.176049e-57	-8.615850e-47
Msa0580370	Msa1329980	0.844378	7.846258e-59	-8.615850e-47
Msa0581470	Msa1329980	0.818487	1.910472e-52	-8.615850e-47
Msa0590830	Msa1329980	0.818642	1.761659e-52	-8.615850e-47
Msa0894400	Msa1329980	0.804001	2.663748e-49	-8.615850e-47
Msa0902510	Msa1329980	0.802445	5.592382e-49	-8.615850e-47
Msa0921000	Msa1329980	0.807550	4.786290e-50	-8.615850e-47
Msa0941190	Msa1329980	0.807223	5.613670e-50	-8.615850e-47
Msa0967870	Msa1329980	0.814586	1.428962e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1329980	MtrunA17_Chr4g0059551	95.254	295	7	2	28	321	69	357	0.0	572

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1329980	AT3G48160.1	49.191	309	119	13	28	321	86	371	5.47e-70	223
Msa1329980	AT3G48160.2	49.026	308	119	13	28	320	86	370	1.85e-68	219
Msa1329980	AT3G01330.1	41.297	293	137	6	28	320	73	330	6.89e-58	191
Msa1329980	AT5G14960.1	34.106	302	157	9	28	319	65	334	1.50e-43	153
Msa1329980	AT5G14960.2	35.945	217	116	6	113	319	38	241	3.95e-32	120

Find 90 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATCTGGGAAAAGTTGAATT+AGG	0.171110	8_4:+49018743	None:intergenic
CACCCTGACTTCCAGTGGTT+TGG	0.211662	8_4:+49018810	None:intergenic
GGCAATTCCTGTTGCTTTAC+AGG	0.216414	8_4:-49019130	Msa1329980:CDS
TTCAGGTGGCTAGGCTTAAA+AGG	0.224076	8_4:-49017174	Msa1329980:CDS
CTTAATATACCTTCAATATA+AGG	0.267242	8_4:-49016266	Msa1329980:three_prime_UTR
ATTCAAAACAAAACGATTCT+AGG	0.280464	8_4:-49017122	Msa1329980:CDS
TTTCCAGGTATACTGATTCT+TGG	0.296038	8_4:+49019161	None:intergenic
ACCCTGACTTCCAGTGGTTT+GGG	0.311184	8_4:+49018811	None:intergenic
ATCTGGGAAAAGTTGAATTA+GGG	0.323897	8_4:+49018744	None:intergenic
TGGAGAGATCTGTTCTTAAT+TGG	0.334548	8_4:-49019847	Msa1329980:CDS
AATTGCCGCAAAACCTTTCC+AGG	0.340573	8_4:+49019146	None:intergenic
TACCTTCTCGATAAGGTTCA+TGG	0.347489	8_4:+49017363	None:intergenic
TGTTGCTTTACAGGAGCTTA+AGG	0.369256	8_4:-49019121	Msa1329980:intron
ATTCTCAGAGCTTCCAGCTT+TGG	0.369624	8_4:+49016906	None:intergenic
ATCCCAAACCACTGGAAGTC+AGG	0.370120	8_4:-49018813	Msa1329980:CDS
ATTCTGACTTCCAGTGGGTT+GGG	0.370825	8_4:+49018778	None:intergenic
ACTTCAGCTAACTATCAATT+TGG	0.373900	8_4:-49016952	Msa1329980:CDS
CATTCTGACTTCCAGTGGGT+TGG	0.380743	8_4:+49018777	None:intergenic
GAACAAGTCTGTTCTATTCC+TGG	0.392480	8_4:+49017059	None:intergenic
ATGAAAATGCTTAATTGCCT+TGG	0.399936	8_4:+49016821	None:intergenic
GTACAGCCTAATCAGATATT+AGG	0.403736	8_4:+49016367	None:intergenic
AAGTGAAGCAGGTGCATGAC+TGG	0.407996	8_4:-49016882	Msa1329980:CDS
AGTATATTACCTTCTCGATA+AGG	0.412345	8_4:+49017356	None:intergenic
TCTTGGTACTCTGAAGTTGC+TGG	0.425848	8_4:-49016546	Msa1329980:three_prime_UTR
ACATGGAAGCATGGAAATCT+TGG	0.426073	8_4:-49016563	Msa1329980:three_prime_UTR
AACAAAACGATTCTAGGAAA+AGG	0.426966	8_4:-49017116	Msa1329980:CDS
ATATCTGATTAGGCTGTACT+TGG	0.428901	8_4:-49016363	Msa1329980:three_prime_UTR
GCACATTTGCAATATCATAA+AGG	0.434271	8_4:+49017392	None:intergenic
GATTCTAGGAAAAGGGCGTT+TGG	0.443366	8_4:-49017108	Msa1329980:CDS
TTAAGCTCCTGTAAAGCAAC+AGG	0.443519	8_4:+49019123	None:intergenic
ATACAAGAAAACCAGCATTC+AGG	0.443643	8_4:-49017191	Msa1329980:CDS
GCAGATGAAACAAATGGAAA+AGG	0.445729	8_4:-49019887	None:intergenic
AAATGATAGTGGGCTATGTC+TGG	0.446224	8_4:-49017001	Msa1329980:CDS
CTGGCCTTGCAGCAAAAGTT+AGG	0.448266	8_4:-49017417	Msa1329980:CDS
AACGTGCAACCTTATATTGA+AGG	0.458845	8_4:+49016257	None:intergenic
TTAATTGGTGAGTTGAGTAA+TGG	0.461187	8_4:-49019832	Msa1329980:CDS
AAGACAATGGAAAATGATAG+TGG	0.463413	8_4:-49017012	Msa1329980:CDS
ATAACACCTCTTTGTGCAAA+GGG	0.468799	8_4:-49016330	Msa1329980:three_prime_UTR
GATACAAAGGCAGGAGCAAA+AGG	0.470114	8_4:+49016928	None:intergenic
AAGCCTAGCCACCTGAATGC+TGG	0.489317	8_4:+49017180	None:intergenic
CTCTGAGAATAAAGTGAAGC+AGG	0.496045	8_4:-49016893	Msa1329980:CDS
ACAAAACGATTCTAGGAAAA+GGG	0.498407	8_4:-49017115	Msa1329980:CDS
CCTGCCTTTGTATCCAAAGC+TGG	0.506957	8_4:-49016919	Msa1329980:CDS
GAATAGAACAGACTTGTTCA+TGG	0.511403	8_4:-49017055	Msa1329980:CDS
AGAACTTTACTCTCATTACA+TGG	0.523192	8_4:-49016580	Msa1329980:three_prime_UTR
AGGAAAATAGTGATGAGTGC+TGG	0.524012	8_4:-49019867	Msa1329980:CDS
ACAACCTTGCTGCATCATCA+AGG	0.524403	8_4:+49017560	None:intergenic
AAGCCAAGAATCAGTATACC+TGG	0.526713	8_4:-49019164	Msa1329980:CDS
TGAGTTGAGTAATGGAGAAA+TGG	0.528740	8_4:-49019824	Msa1329980:intron
AAAATCCGTACATTCTATGT+TGG	0.531566	8_4:+49016408	None:intergenic
AGATTTCCCTTTGCACAAAG+AGG	0.535412	8_4:+49016324	None:intergenic
AATCTCAATTCTTCACAAGA+AGG	0.539424	8_4:-49018975	Msa1329980:CDS
ACTCTGAAGTTGCTGGGAAG+AGG	0.539687	8_4:-49016539	Msa1329980:three_prime_UTR
GCTTGGCCTAATATCTGATT+AGG	0.543869	8_4:-49016373	Msa1329980:three_prime_UTR
TCACAAACATAAGCTTTGCC+AGG	0.545422	8_4:-49017077	Msa1329980:CDS
AAGAATCAGTATACCTGGAA+AGG	0.546799	8_4:-49019159	Msa1329980:CDS
ATGTGCCAACATAGAATGTA+CGG	0.549625	8_4:-49016413	Msa1329980:three_prime_UTR
GATGCAGCAAGGTTGTTGCT+TGG	0.550005	8_4:-49017553	Msa1329980:CDS
CCAGCTTTGGATACAAAGGC+AGG	0.550221	8_4:+49016919	None:intergenic
ATTGTCATTCTGACTTCCAG+TGG	0.553060	8_4:+49018772	None:intergenic
TATAACACCTCTTTGTGCAA+AGG	0.559083	8_4:-49016331	Msa1329980:three_prime_UTR
AAACCAGCATTCAGGTGGCT+AGG	0.559723	8_4:-49017183	Msa1329980:CDS
TTGTCATTCTGACTTCCAGT+GGG	0.561775	8_4:+49018773	None:intergenic
TCAGGTGGCTAGGCTTAAAA+GGG	0.561931	8_4:-49017173	Msa1329980:CDS
CTCCATGAACCTTATCGAGA+AGG	0.564896	8_4:-49017365	Msa1329980:intron
CTTGGTACTCTGAAGTTGCT+GGG	0.568986	8_4:-49016545	Msa1329980:three_prime_UTR
TCCCAAACCACTGGAAGTCA+GGG	0.581818	8_4:-49018812	Msa1329980:CDS
GCTTCCAGCTTTGGATACAA+AGG	0.589316	8_4:+49016915	None:intergenic
GGTATCGGATGAAGAGGATG+AGG	0.589877	8_4:-49018846	Msa1329980:CDS
TGATTCACCCTGACTTCCAG+TGG	0.592103	8_4:+49018805	None:intergenic
AAAAGGGAAGACATTGAATG+AGG	0.592429	8_4:-49017157	Msa1329980:CDS
AGTGAAGCAGGTGCATGACT+GGG	0.592595	8_4:-49016881	Msa1329980:CDS
GATTTAGGTATCGGATGAAG+AGG	0.593110	8_4:-49018852	Msa1329980:intron
AATAGAACAGACTTGTTCAT+GGG	0.597678	8_4:-49017054	Msa1329980:CDS
CAACCTTGCTGCATCATCAA+GGG	0.604844	8_4:+49017561	None:intergenic
CTCAATTCTTCACAAGAAGG+TGG	0.607030	8_4:-49018972	Msa1329980:CDS
AGACAATGGAAAATGATAGT+GGG	0.608266	8_4:-49017011	Msa1329980:CDS
ACTCTCATTACATGGAAGCA+TGG	0.610228	8_4:-49016572	Msa1329980:three_prime_UTR
GAATCACTATCCCAACCCAC+TGG	0.620440	8_4:-49018788	Msa1329980:CDS
GAATTGTTATCCCAAACCAC+TGG	0.620803	8_4:-49018821	Msa1329980:CDS
CTTTAAGAAGCAAAAGACAA+TGG	0.627305	8_4:-49017025	Msa1329980:CDS
AGGTGGCAATGAAGATGTGA+AGG	0.635108	8_4:-49018955	Msa1329980:intron
TGTGTCTAAGTACACTACAA+TGG	0.635405	8_4:+49016442	None:intergenic
CAAGAAAACCAGCATTCAGG+TGG	0.647844	8_4:-49017188	Msa1329980:CDS
TATCTGATTAGGCTGTACTT+GGG	0.658236	8_4:-49016362	Msa1329980:three_prime_UTR
TGCCCTCAGTATCAAAACCA+AGG	0.661299	8_4:-49016838	Msa1329980:CDS
CTTCTCGATAAGGTTCATGG+AGG	0.669999	8_4:+49017366	None:intergenic
AGAACAGACTTGTTCATGGG+TGG	0.672206	8_4:-49017051	Msa1329980:CDS
TGTCTGGAAGATGTGAAACA+AGG	0.683639	8_4:-49016985	Msa1329980:CDS
TATCCCTTGATGATGCAGCA+AGG	0.728015	8_4:-49017564	Msa1329980:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATTATCTAAAATCATAAA+TGG	+	chr8_4:49016607-49016626	None:intergenic	10.0%
!!!	GATATTTAGTTTTAATTAAA+AGG	-	chr8_4:49016653-49016672	Msa1329980:intron	10.0%
!!!	NNNNNNNNNTTGTTTTTGTT+TGG	-	chr8_4:49016901-49016920	Msa1329980:CDS	10.0%
!!!	GATATTTTTAAATCATTAAA+AGG	+	chr8_4:49017603-49017622	None:intergenic	10.0%
!!	TTATAAAATTCAATAAACAA+TGG	+	chr8_4:49018262-49018281	None:intergenic	10.0%
!!!	TTTATTGAATTTTATAATAC+TGG	-	chr8_4:49018265-49018284	Msa1329980:intron	10.0%
!!!	TAGATTCTTTATTAATTTTA+TGG	-	chr8_4:49019876-49019895	Msa1329980:CDS	10.0%
!!!	AGATTCTTTATTAATTTTAT+GGG	-	chr8_4:49019877-49019896	Msa1329980:CDS	10.0%
!!!	TTAAGGTAATTTCAAATTTT+AGG	-	chr8_4:49017007-49017026	Msa1329980:CDS	15.0%
!!!	TAATTGTTTTGATTTTGAAT+GGG	-	chr8_4:49017088-49017107	Msa1329980:CDS	15.0%
!!!	ATTTTTATGAGAAGTATAAT+TGG	-	chr8_4:49017206-49017225	Msa1329980:CDS	15.0%
!!!	AAAATGGTAACTTTTTTATT+TGG	-	chr8_4:49017396-49017415	Msa1329980:CDS	15.0%
!!!	AAATGGTAACTTTTTTATTT+GGG	-	chr8_4:49017397-49017416	Msa1329980:CDS	15.0%
!!!	TTTTGTTTTTCTTCAAATTT+TGG	-	chr8_4:49017564-49017583	Msa1329980:CDS	15.0%
!!!	TTTGTTTTTCTTCAAATTTT+GGG	-	chr8_4:49017565-49017584	Msa1329980:CDS	15.0%
!!!	AATATAAAATGAAAAGTGTA+AGG	+	chr8_4:49018781-49018800	None:intergenic	15.0%
!!!	AATCATAAATGGATTTTGAT+TGG	+	chr8_4:49016596-49016615	None:intergenic	20.0%
!!!	GTTTTTGTTTGGTTTTTTTT+AGG	-	chr8_4:49016912-49016931	Msa1329980:CDS	20.0%
!!	TCACAGAATTTAAATTAAGA+AGG	+	chr8_4:49017041-49017060	None:intergenic	20.0%
!!!	GTAATTGTTTTGATTTTGAA+TGG	-	chr8_4:49017087-49017106	Msa1329980:CDS	20.0%
!!	AGAAGAATAAACTGTAAATA+TGG	+	chr8_4:49017519-49017538	None:intergenic	20.0%
!!	TATTCTTCTAAATGCATTAT+AGG	-	chr8_4:49017530-49017549	Msa1329980:CDS	20.0%
!!	TTAACTAAATTATCATTCTC+TGG	+	chr8_4:49018224-49018243	None:intergenic	20.0%
!!	CTTAATATACCTTCAATATA+AGG	-	chr8_4:49019845-49019864	Msa1329980:CDS	20.0%
!	AAAAAGATAGAAATGGATAG+TGG	-	chr8_4:49016399-49016418	Msa1329980:three_prime_UTR	25.0%
!	AAAAGATAGAAATGGATAGT+GGG	-	chr8_4:49016400-49016419	Msa1329980:three_prime_UTR	25.0%
!!!	TTTTATGAGTTGAAGTTGTT+TGG	+	chr8_4:49016725-49016744	None:intergenic	25.0%
!!!	TTGATTTTGAATGGGTTTTT+AGG	-	chr8_4:49017096-49017115	Msa1329980:CDS	25.0%
!!	AGAAGTATAATTGGTTTAGT+AGG	-	chr8_4:49017215-49017234	Msa1329980:intron	25.0%
!!	GAAGTATAATTGGTTTAGTA+GGG	-	chr8_4:49017216-49017235	Msa1329980:intron	25.0%
!	TTTAAGTACTTTCGTGATTT+AGG	-	chr8_4:49017244-49017263	Msa1329980:intron	25.0%
!!!	TTACCATTTTTCAAAGATCT+GGG	+	chr8_4:49017386-49017405	None:intergenic	25.0%
!!!	ATAGCAGAATTTTTGAAACA+TGG	-	chr8_4:49017694-49017713	Msa1329980:intron	25.0%
!!!	TAGCAGAATTTTTGAAACAT+GGG	-	chr8_4:49017695-49017714	Msa1329980:intron	25.0%
!	TGCAATTTGCAAATTAAAGT+TGG	+	chr8_4:49017753-49017772	None:intergenic	25.0%
!!	AACCCTTATTTAGTTAACTT+GGG	+	chr8_4:49017842-49017861	None:intergenic	25.0%
!	CTAAGTGTTTGTTTAGATTA+AGG	+	chr8_4:49017970-49017989	None:intergenic	25.0%
!!!	ATCAGATTGTTCAAGTTTTT+AGG	-	chr8_4:49018101-49018120	Msa1329980:intron	25.0%
!!	TTAGGATGTTTTCTTTTCTT+AGG	-	chr8_4:49018119-49018138	Msa1329980:intron	25.0%
!!	TAGGATGTTTTCTTTTCTTA+GGG	-	chr8_4:49018120-49018139	Msa1329980:intron	25.0%
!!!	TTGTTTTGTTCGAATGTAAA+TGG	+	chr8_4:49018155-49018174	None:intergenic	25.0%
!	AATTTAGTTAAAGATGTGCA+TGG	-	chr8_4:49018233-49018252	Msa1329980:intron	25.0%
!	ATTAAAGACATAAATCAGCT+TGG	+	chr8_4:49018455-49018474	None:intergenic	25.0%
!	AGTTTAACATATCAGATGTA+TGG	+	chr8_4:49018485-49018504	None:intergenic	25.0%
!	GTTAACGAAAACAAACAAAT+TGG	+	chr8_4:49018635-49018654	None:intergenic	25.0%
!	ATAAAGAAATCAATGCAAAG+AGG	+	chr8_4:49018857-49018876	None:intergenic	25.0%
!	ATTCAAAACAAAACGATTCT+AGG	-	chr8_4:49018989-49019008	Msa1329980:CDS	25.0%
!!	TTTTGATACTGTTTCATAGT+TGG	-	chr8_4:49019406-49019425	Msa1329980:intron	25.0%
!	TTTGATACTGTTTCATAGTT+GGG	-	chr8_4:49019407-49019426	Msa1329980:intron	25.0%
!	TATGTTTAATCTTTATGCAG+TGG	-	chr8_4:49019439-49019458	Msa1329980:intron	25.0%
!	TTAATTGGTGAGTTGAGTAA+TGG	-	chr8_4:49016279-49016298	Msa1329980:three_prime_UTR	30.0%
	GAAATGGTATGAGAGAAAAA+TGG	-	chr8_4:49016303-49016322	Msa1329980:three_prime_UTR	30.0%
	TGAGAGAAAAATGGTGAAAT+TGG	-	chr8_4:49016312-49016331	Msa1329980:three_prime_UTR	30.0%
	GAGAGAAAAATGGTGAAATT+GGG	-	chr8_4:49016313-49016332	Msa1329980:three_prime_UTR	30.0%
	GAATAAAGGTTAGAAGAAGA+TGG	-	chr8_4:49016338-49016357	Msa1329980:three_prime_UTR	30.0%
!!	AGAAAATGTAGAGTATTGAG+AGG	-	chr8_4:49016371-49016390	Msa1329980:three_prime_UTR	30.0%
	GGATGTGAATTGATTATGTT+TGG	+	chr8_4:49016769-49016788	None:intergenic	30.0%
!!!	GATTTTGGTTAAAAGTGAGT+TGG	+	chr8_4:49016790-49016809	None:intergenic	30.0%
	AATCTCAATTCTTCACAAGA+AGG	-	chr8_4:49017136-49017155	Msa1329980:CDS	30.0%
	TACTTTCGTGATTTAGGTAT+CGG	-	chr8_4:49017250-49017269	Msa1329980:intron	30.0%
	ATCTGGGAAAAGTTGAATTA+GGG	+	chr8_4:49017370-49017389	None:intergenic	30.0%
!	TTTCCCAGATCTTTGAAAAA+TGG	-	chr8_4:49017380-49017399	Msa1329980:CDS	30.0%
!!	GTTACCATTTTTCAAAGATC+TGG	+	chr8_4:49017387-49017406	None:intergenic	30.0%
	TAAGAAAAACTAGAGTAGAG+TGG	-	chr8_4:49017640-49017659	Msa1329980:intron	30.0%
!	GGCGATAATTTGAATTTTTG+AGG	-	chr8_4:49017661-49017680	Msa1329980:intron	30.0%
!!!	GAATTTTTGAAACATGGGTT+TGG	-	chr8_4:49017700-49017719	Msa1329980:intron	30.0%
	AACCCCAAGTTAACTAAATA+AGG	-	chr8_4:49017836-49017855	Msa1329980:intron	30.0%
	ACCCCAAGTTAACTAAATAA+GGG	-	chr8_4:49017837-49017856	Msa1329980:intron	30.0%
!	ACCCTTATTTAGTTAACTTG+GGG	+	chr8_4:49017841-49017860	None:intergenic	30.0%
!	GAACCCTTATTTAGTTAACT+TGG	+	chr8_4:49017843-49017862	None:intergenic	30.0%
	CAAAAGACATAATACAGGTA+TGG	+	chr8_4:49018023-49018042	None:intergenic	30.0%
	TGAACAATCTGATGAGAATT+GGG	+	chr8_4:49018094-49018113	None:intergenic	30.0%
	TTGAACAATCTGATGAGAAT+TGG	+	chr8_4:49018095-49018114	None:intergenic	30.0%
!	TGTTTTCTTTTCTTAGGGTT+AGG	-	chr8_4:49018125-49018144	Msa1329980:intron	30.0%
!	TTTAATGTTTTGCAGACAGA+AGG	-	chr8_4:49018344-49018363	Msa1329980:intron	30.0%
!	TTAATGTTTTGCAGACAGAA+GGG	-	chr8_4:49018345-49018364	Msa1329980:intron	30.0%
	GCACATTTGCAATATCATAA+AGG	+	chr8_4:49018722-49018741	None:intergenic	30.0%
	AGTATATTACCTTCTCGATA+AGG	+	chr8_4:49018758-49018777	None:intergenic	30.0%
!	TTTTCTTGTATCTGTGGTAT+GGG	+	chr8_4:49018911-49018930	None:intergenic	30.0%
!	AACAAAACGATTCTAGGAAA+AGG	-	chr8_4:49018995-49019014	Msa1329980:CDS	30.0%
!	ACAAAACGATTCTAGGAAAA+GGG	-	chr8_4:49018996-49019015	Msa1329980:CDS	30.0%
!	AATAGAACAGACTTGTTCAT+GGG	-	chr8_4:49019057-49019076	Msa1329980:intron	30.0%
!	CTTTAAGAAGCAAAAGACAA+TGG	-	chr8_4:49019086-49019105	Msa1329980:intron	30.0%
	AAGACAATGGAAAATGATAG+TGG	-	chr8_4:49019099-49019118	Msa1329980:intron	30.0%
	AGACAATGGAAAATGATAGT+GGG	-	chr8_4:49019100-49019119	Msa1329980:intron	30.0%
	ACTTCAGCTAACTATCAATT+TGG	-	chr8_4:49019159-49019178	Msa1329980:CDS	30.0%
	ATGAAAATGCTTAATTGCCT+TGG	+	chr8_4:49019293-49019312	None:intergenic	30.0%
	AGAACTTTACTCTCATTACA+TGG	-	chr8_4:49019531-49019550	Msa1329980:intron	30.0%
	AAAATCCGTACATTCTATGT+TGG	+	chr8_4:49019706-49019725	None:intergenic	30.0%
	TGGAGAGATCTGTTCTTAAT+TGG	-	chr8_4:49016264-49016283	Msa1329980:three_prime_UTR	35.0%
!	TGAGTTGAGTAATGGAGAAA+TGG	-	chr8_4:49016287-49016306	Msa1329980:three_prime_UTR	35.0%
	GGTGAAATTGGGAAGAATAA+AGG	-	chr8_4:49016324-49016343	Msa1329980:three_prime_UTR	35.0%
	AGGTTAGAAGAAGATGGAAA+TGG	-	chr8_4:49016344-49016363	Msa1329980:three_prime_UTR	35.0%
!!	AAATGTAGAGTATTGAGAGG+TGG	-	chr8_4:49016374-49016393	Msa1329980:three_prime_UTR	35.0%
	GGTGGAGAAAAAGATAGAAA+TGG	-	chr8_4:49016392-49016411	Msa1329980:three_prime_UTR	35.0%
!!	AAATGGATAGTGGGTAGAAA+TGG	-	chr8_4:49016409-49016428	Msa1329980:three_prime_UTR	35.0%
!!	TTTCCAGGTATACTGATTCT+TGG	+	chr8_4:49016953-49016972	None:intergenic	35.0%
	AAGAATCAGTATACCTGGAA+AGG	-	chr8_4:49016952-49016971	Msa1329980:CDS	35.0%
!!	TTGAATGGGTTTTTAGGAAG+AGG	-	chr8_4:49017102-49017121	Msa1329980:CDS	35.0%
!!	TGAATGGGTTTTTAGGAAGA+GGG	-	chr8_4:49017103-49017122	Msa1329980:CDS	35.0%
!!	GTTTTTAGGAAGAGGGTTTA+TGG	-	chr8_4:49017110-49017129	Msa1329980:CDS	35.0%
	GATCTGGGAAAAGTTGAATT+AGG	+	chr8_4:49017371-49017390	None:intergenic	35.0%
!!	TTATGAACCTGTGTTTTTGC+TGG	-	chr8_4:49017438-49017457	Msa1329980:intron	35.0%
	ATTAATGTGTGTGTAGACTG+AGG	+	chr8_4:49017908-49017927	None:intergenic	35.0%
	ACACACACATTAATACGTTG+TGG	-	chr8_4:49017914-49017933	Msa1329980:intron	35.0%
	CACACACATTAATACGTTGT+GGG	-	chr8_4:49017915-49017934	Msa1329980:intron	35.0%
!!	CGTTGTGGGTTATAGTTTTA+AGG	-	chr8_4:49017929-49017948	Msa1329980:intron	35.0%
	GTGCACAAAAGACATAATAC+AGG	+	chr8_4:49018028-49018047	None:intergenic	35.0%
	TATAATACTGGAGTCGTATG+TGG	-	chr8_4:49018277-49018296	Msa1329980:intron	35.0%
	CTTGGAATGAACAAGAAACT+AGG	+	chr8_4:49018437-49018456	None:intergenic	35.0%
	AACATATCAGATGTATGGCA+TGG	+	chr8_4:49018480-49018499	None:intergenic	35.0%
!	GTTTTCTTGTATCTGTGGTA+TGG	+	chr8_4:49018912-49018931	None:intergenic	35.0%
	ATACAAGAAAACCAGCATTC+AGG	-	chr8_4:49018920-49018939	Msa1329980:intron	35.0%
	AAAAGGGAAGACATTGAATG+AGG	-	chr8_4:49018954-49018973	Msa1329980:intron	35.0%
!	GAATAGAACAGACTTGTTCA+TGG	-	chr8_4:49019056-49019075	Msa1329980:intron	35.0%
	TGTGTCTAAGTACACTACAA+TGG	+	chr8_4:49019672-49019691	None:intergenic	35.0%
	ATGTGCCAACATAGAATGTA+CGG	-	chr8_4:49019698-49019717	Msa1329980:intron	35.0%
!!!	ATTTTTTTAGCTGTGACGCT+TGG	-	chr8_4:49019721-49019740	Msa1329980:intron	35.0%
	GTACAGCCTAATCAGATATT+AGG	+	chr8_4:49019747-49019766	None:intergenic	35.0%
	ATATCTGATTAGGCTGTACT+TGG	-	chr8_4:49019748-49019767	Msa1329980:intron	35.0%
	TATCTGATTAGGCTGTACTT+GGG	-	chr8_4:49019749-49019768	Msa1329980:intron	35.0%
	TATAACACCTCTTTGTGCAA+AGG	-	chr8_4:49019780-49019799	Msa1329980:intron	35.0%
	ATAACACCTCTTTGTGCAAA+GGG	-	chr8_4:49019781-49019800	Msa1329980:intron	35.0%
	AACGTGCAACCTTATATTGA+AGG	+	chr8_4:49019857-49019876	None:intergenic	35.0%
	AGGAAAATAGTGATGAGTGC+TGG	-	chr8_4:49016244-49016263	Msa1329980:three_prime_UTR	40.0%
!	AGCTTCTGGAGAAATGAAGA+AGG	-	chr8_4:49016433-49016452	Msa1329980:three_prime_UTR	40.0%
!	GCTTCTGGAGAAATGAAGAA+GGG	-	chr8_4:49016434-49016453	Msa1329980:three_prime_UTR	40.0%
!	CTTCTGGAGAAATGAAGAAG+GGG	-	chr8_4:49016435-49016454	Msa1329980:three_prime_UTR	40.0%
!	TTCTGGAGAAATGAAGAAGG+GGG	-	chr8_4:49016436-49016455	Msa1329980:three_prime_UTR	40.0%
	AAGCCAAGAATCAGTATACC+TGG	-	chr8_4:49016947-49016966	Msa1329980:CDS	40.0%
!	GTATACCTGGAAAGGTTTTG+CGG	-	chr8_4:49016960-49016979	Msa1329980:CDS	40.0%
	TTAAGCTCCTGTAAAGCAAC+AGG	+	chr8_4:49016991-49017010	None:intergenic	40.0%
!!	TGTTGCTTTACAGGAGCTTA+AGG	-	chr8_4:49016990-49017009	Msa1329980:CDS	40.0%
	CTCAATTCTTCACAAGAAGG+TGG	-	chr8_4:49017139-49017158	Msa1329980:CDS	40.0%
!!	GATTTAGGTATCGGATGAAG+AGG	-	chr8_4:49017259-49017278	Msa1329980:intron	40.0%
	GAATTGTTATCCCAAACCAC+TGG	-	chr8_4:49017290-49017309	Msa1329980:intron	40.0%
	TTGTCATTCTGACTTCCAGT+GGG	+	chr8_4:49017341-49017360	None:intergenic	40.0%
	ATTGTCATTCTGACTTCCAG+TGG	+	chr8_4:49017342-49017361	None:intergenic	40.0%
	AACAACACCAGCAAAAACAC+AGG	+	chr8_4:49017448-49017467	None:intergenic	40.0%
!!!	TTTTGCTGGTGTTGTTGTTG+TGG	-	chr8_4:49017452-49017471	Msa1329980:intron	40.0%
!	AGGGTTCAATCCAATTTTGC+TGG	-	chr8_4:49017856-49017875	Msa1329980:intron	40.0%
!	GGGTTCAATCCAATTTTGCT+GGG	-	chr8_4:49017857-49017876	Msa1329980:intron	40.0%
	CTATGCTTACCCAGCAAAAT+TGG	+	chr8_4:49017869-49017888	None:intergenic	40.0%
!	CAATTTTGCTGGGTAAGCAT+AGG	-	chr8_4:49017867-49017886	Msa1329980:intron	40.0%
	TGAGAATTGGGATTGTTCTG+AGG	+	chr8_4:49018082-49018101	None:intergenic	40.0%
!!!	TTGGCACTGATTGCATTTTG+AGG	-	chr8_4:49018308-49018327	Msa1329980:intron	40.0%
	AGACAGAAGGGAAAAATCTC+TGG	-	chr8_4:49018357-49018376	Msa1329980:intron	40.0%
!	TTTTCACTTACAGTCCCATC+TGG	-	chr8_4:49018675-49018694	Msa1329980:intron	40.0%
	TACCTTCTCGATAAGGTTCA+TGG	+	chr8_4:49018751-49018770	None:intergenic	40.0%
!!!	TGCTGGTTTTCTTGTATCTG+TGG	+	chr8_4:49018917-49018936	None:intergenic	40.0%
	TCACAAACATAAGCTTTGCC+AGG	-	chr8_4:49019034-49019053	Msa1329980:intron	40.0%
	GAACAAGTCTGTTCTATTCC+TGG	+	chr8_4:49019055-49019074	None:intergenic	40.0%
!!	AAATGATAGTGGGCTATGTC+TGG	-	chr8_4:49019110-49019129	Msa1329980:intron	40.0%
	TGTCTGGAAGATGTGAAACA+AGG	-	chr8_4:49019126-49019145	Msa1329980:CDS	40.0%
!	CTCTGAGAATAAAGTGAAGC+AGG	-	chr8_4:49019218-49019237	Msa1329980:intron	40.0%
!!!	TGCCTTGGTTTTGATACTGA+GGG	+	chr8_4:49019278-49019297	None:intergenic	40.0%
!!!	TTGCCTTGGTTTTGATACTG+AGG	+	chr8_4:49019279-49019298	None:intergenic	40.0%
	ACTCTCATTACATGGAAGCA+TGG	-	chr8_4:49019539-49019558	Msa1329980:intron	40.0%
!	ACATGGAAGCATGGAAATCT+TGG	-	chr8_4:49019548-49019567	Msa1329980:intron	40.0%
	GCTTGGCCTAATATCTGATT+AGG	-	chr8_4:49019738-49019757	Msa1329980:intron	40.0%
	AGATTTCCCTTTGCACAAAG+AGG	+	chr8_4:49019790-49019809	None:intergenic	40.0%
	TGGGTAGAAATGGAAGCTTC+TGG	-	chr8_4:49016419-49016438	Msa1329980:three_prime_UTR	45.0%
	AGAAATGAAGAAGGGGGAGT+GGG	-	chr8_4:49016442-49016461	Msa1329980:three_prime_UTR	45.0%
	AATTGCCGCAAAACCTTTCC+AGG	+	chr8_4:49016968-49016987	None:intergenic	45.0%
!!	GGCAATTCCTGTTGCTTTAC+AGG	-	chr8_4:49016981-49017000	Msa1329980:CDS	45.0%
	AGGTGGCAATGAAGATGTGA+AGG	-	chr8_4:49017156-49017175	Msa1329980:CDS	45.0%
!	ATTCTGACTTCCAGTGGGTT+GGG	+	chr8_4:49017336-49017355	None:intergenic	45.0%
	GTCGTATGTGGACTTAGACT+TGG	-	chr8_4:49018289-49018308	Msa1329980:intron	45.0%
!!	TATCCCTTGATGATGCAGCA+AGG	-	chr8_4:49018547-49018566	Msa1329980:intron	45.0%
	CAACCTTGCTGCATCATCAA+GGG	+	chr8_4:49018553-49018572	None:intergenic	45.0%
	ACAACCTTGCTGCATCATCA+AGG	+	chr8_4:49018554-49018573	None:intergenic	45.0%
	CTTCTCGATAAGGTTCATGG+AGG	+	chr8_4:49018748-49018767	None:intergenic	45.0%
	CTCCATGAACCTTATCGAGA+AGG	-	chr8_4:49018746-49018765	Msa1329980:CDS	45.0%
	CAAGAAAACCAGCATTCAGG+TGG	-	chr8_4:49018923-49018942	Msa1329980:intron	45.0%
	TTCAGGTGGCTAGGCTTAAA+AGG	-	chr8_4:49018937-49018956	Msa1329980:intron	45.0%
	TCAGGTGGCTAGGCTTAAAA+GGG	-	chr8_4:49018938-49018957	Msa1329980:intron	45.0%
!!	GATTCTAGGAAAAGGGCGTT+TGG	-	chr8_4:49019003-49019022	Msa1329980:intron	45.0%
!	AGAACAGACTTGTTCATGGG+TGG	-	chr8_4:49019060-49019079	Msa1329980:intron	45.0%
	GATACAAAGGCAGGAGCAAA+AGG	+	chr8_4:49019186-49019205	None:intergenic	45.0%
!!	GCTTCCAGCTTTGGATACAA+AGG	+	chr8_4:49019199-49019218	None:intergenic	45.0%
	ATTCTCAGAGCTTCCAGCTT+TGG	+	chr8_4:49019208-49019227	None:intergenic	45.0%
	TGCCCTCAGTATCAAAACCA+AGG	-	chr8_4:49019273-49019292	Msa1329980:intron	45.0%
!!	TCTTGGTACTCTGAAGTTGC+TGG	-	chr8_4:49019565-49019584	Msa1329980:intron	45.0%
!!	CTTGGTACTCTGAAGTTGCT+GGG	-	chr8_4:49019566-49019585	Msa1329980:intron	45.0%
	GAGAAATGAAGAAGGGGGAG+TGG	-	chr8_4:49016441-49016460	Msa1329980:three_prime_UTR	50.0%
!	GGTATCGGATGAAGAGGATG+AGG	-	chr8_4:49017265-49017284	Msa1329980:intron	50.0%
	ATCCCAAACCACTGGAAGTC+AGG	-	chr8_4:49017298-49017317	Msa1329980:intron	50.0%
	TCCCAAACCACTGGAAGTCA+GGG	-	chr8_4:49017299-49017318	Msa1329980:intron	50.0%
	ACCCTGACTTCCAGTGGTTT+GGG	+	chr8_4:49017303-49017322	None:intergenic	50.0%
	TGATTCACCCTGACTTCCAG+TGG	+	chr8_4:49017309-49017328	None:intergenic	50.0%
	GAATCACTATCCCAACCCAC+TGG	-	chr8_4:49017323-49017342	Msa1329980:intron	50.0%
	CATTCTGACTTCCAGTGGGT+TGG	+	chr8_4:49017337-49017356	None:intergenic	50.0%
	TAACCACTCTACTCTGCAGC+TGG	-	chr8_4:49018518-49018537	Msa1329980:intron	50.0%
	TTTCCAGCTGCAGAGTAGAG+TGG	+	chr8_4:49018524-49018543	None:intergenic	50.0%
	GATGCAGCAAGGTTGTTGCT+TGG	-	chr8_4:49018558-49018577	Msa1329980:intron	50.0%
!	CTTTTGCTGCAAGGCCAGAT+GGG	+	chr8_4:49018692-49018711	None:intergenic	50.0%
!	ACTTTTGCTGCAAGGCCAGA+TGG	+	chr8_4:49018693-49018712	None:intergenic	50.0%
!!	CTGGCCTTGCAGCAAAAGTT+AGG	-	chr8_4:49018694-49018713	Msa1329980:intron	50.0%
	AAACCAGCATTCAGGTGGCT+AGG	-	chr8_4:49018928-49018947	Msa1329980:intron	50.0%
!!	CCAGCTTTGGATACAAAGGC+AGG	+	chr8_4:49019195-49019214	None:intergenic	50.0%
	CCTGCCTTTGTATCCAAAGC+TGG	-	chr8_4:49019192-49019211	Msa1329980:intron	50.0%
	AAGTGAAGCAGGTGCATGAC+TGG	-	chr8_4:49019229-49019248	Msa1329980:intron	50.0%
	AGTGAAGCAGGTGCATGACT+GGG	-	chr8_4:49019230-49019249	Msa1329980:intron	50.0%
!!	ACTCTGAAGTTGCTGGGAAG+AGG	-	chr8_4:49019572-49019591	Msa1329980:intron	50.0%
	CACCCTGACTTCCAGTGGTT+TGG	+	chr8_4:49017304-49017323	None:intergenic	55.0%
	TGCTGGGTAAGCATAGGTCG+AGG	-	chr8_4:49017873-49017892	Msa1329980:intron	55.0%
	GCTGGGTAAGCATAGGTCGA+GGG	-	chr8_4:49017874-49017893	Msa1329980:intron	55.0%
	CTGGGTAAGCATAGGTCGAG+GGG	-	chr8_4:49017875-49017894	Msa1329980:intron	55.0%
!	GGCGCCTAACTTTTGCTGCA+AGG	+	chr8_4:49018701-49018720	None:intergenic	55.0%
	AAGCCTAGCCACCTGAATGC+TGG	+	chr8_4:49018934-49018953	None:intergenic	55.0%
	AAGGGGGAGTGGGAGATGTG+AGG	-	chr8_4:49016452-49016471	Msa1329980:three_prime_UTR	60.0%
	AGGGGGAGTGGGAGATGTGA+GGG	-	chr8_4:49016453-49016472	Msa1329980:three_prime_UTR	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_4	gene	49016228	49019905	49016228	ID=Msa1329980;Name=Msa1329980
chr8_4	mRNA	49016228	49019905	49016228	ID=Msa1329980-mRNA-1;Parent=Msa1329980;Name=Msa1329980-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0\|0.87\|0.77\|0.88\|0.87\|0.88\|9\|403\|322
chr8_4	exon	49016228	49016609	49016228	ID=Msa1329980-mRNA-1:exon:14163;Parent=Msa1329980-mRNA-1
chr8_4	exon	49016810	49017226	49016810	ID=Msa1329980-mRNA-1:exon:14162;Parent=Msa1329980-mRNA-1
chr8_4	exon	49017366	49017445	49017366	ID=Msa1329980-mRNA-1:exon:14161;Parent=Msa1329980-mRNA-1
chr8_4	exon	49017524	49017596	49017524	ID=Msa1329980-mRNA-1:exon:14160;Parent=Msa1329980-mRNA-1
chr8_4	exon	49017710	49017774	49017710	ID=Msa1329980-mRNA-1:exon:14159;Parent=Msa1329980-mRNA-1
chr8_4	exon	49018732	49018867	49018732	ID=Msa1329980-mRNA-1:exon:14158;Parent=Msa1329980-mRNA-1
chr8_4	exon	49018956	49019015	49018956	ID=Msa1329980-mRNA-1:exon:14157;Parent=Msa1329980-mRNA-1
chr8_4	exon	49019122	49019199	49019122	ID=Msa1329980-mRNA-1:exon:14156;Parent=Msa1329980-mRNA-1
chr8_4	exon	49019825	49019905	49019825	ID=Msa1329980-mRNA-1:exon:14155;Parent=Msa1329980-mRNA-1
chr8_4	CDS	49019825	49019905	49019825	ID=Msa1329980-mRNA-1:cds;Parent=Msa1329980-mRNA-1
chr8_4	CDS	49019122	49019199	49019122	ID=Msa1329980-mRNA-1:cds;Parent=Msa1329980-mRNA-1
chr8_4	CDS	49018956	49019015	49018956	ID=Msa1329980-mRNA-1:cds;Parent=Msa1329980-mRNA-1
chr8_4	CDS	49018732	49018867	49018732	ID=Msa1329980-mRNA-1:cds;Parent=Msa1329980-mRNA-1
chr8_4	CDS	49017710	49017774	49017710	ID=Msa1329980-mRNA-1:cds;Parent=Msa1329980-mRNA-1
chr8_4	CDS	49017524	49017596	49017524	ID=Msa1329980-mRNA-1:cds;Parent=Msa1329980-mRNA-1
chr8_4	CDS	49017366	49017445	49017366	ID=Msa1329980-mRNA-1:cds;Parent=Msa1329980-mRNA-1
chr8_4	CDS	49016831	49017226	49016831	ID=Msa1329980-mRNA-1:cds;Parent=Msa1329980-mRNA-1
chr8_4	three_prime_UTR	49016810	49016830	49016810	ID=Msa1329980-mRNA-1:three_prime_utr;Parent=Msa1329980-mRNA-1
chr8_4	three_prime_UTR	49016228	49016609	49016228	ID=Msa1329980-mRNA-1:three_prime_utr;Parent=Msa1329980-mRNA-1

Gene Sequence

>Msa1329980

ATGAAACAAATGGAAAAGGAAAATAGTGATGAGTGCTGGAGAGATCTGTTCTTAATTGGTGAGTTGAGTAATGGAGAAATGGTTCTTGCAAGAAAAGCCAAGAATCAGTATACCTGGAAAGGTTTTGCGGCAATTCCTGTTGCTTTACAGGAGCTTAAGGAAGAGGGTTTATGGCAGAATCTCAATTCTTCACAAGAAGGTGGCAATGAAGATGTGAAGGTATCGGATGAAGAGGATGAGGACGAATTGTTATCCCAAACCACTGGAAGTCAGGGTGAATCACTATCCCAACCCACTGGAAGTCAGAATGACAATCTAAACCCTAATTCAACTTTTCCCAGATCTTTGAAAAATGACAGAAGGGAAAAATCTCTGGCGCTGCTTACTCAGAATTTTGTCAAGCTCTTTGTCTGTTCTAACCTGGAAATGATATCCCTTGATGATGCAGCAAGGTTGTTGCTTGGAGATGCATATAATTCATCAACAATGAGAATCCCATCTGGCCTTGCAGCAAAAGTTAGGCGCCTTTATGATATTGCAAATGTGCTAACCTCCATGAACCTTATCGAGAAGACCCATACCACAGATACAAGAAAACCAGCATTCAGGTGGCTAGGCTTAAAAGGGAAGACATTGAATGAGGCATCACTTTACAATTCAAAACAAAACGATTCTAGGAAAAGGGCGTTTGGAAATGATGTCACAAACATAAGCTTTGCCAGGAATAGAACAGACTTGTTCATGGGTGGTGACTTTAAGAAGCAAAAGACAATGGAAAATGATAGTGGGCTATGTCTGGAAGATGTGAAACAAGGCATAAAACAGACTTCAGCTAACTATCAATTTGGTCCTTTTGCTCCTGCCTTTGTATCCAAAGCTGGAAGCTCTGAGAATAAAGTGAAGCAGGTGCATGACTGGGAGAGTCTCGCTACTGAACATTGCCCTCAGTATCAAAACCAAGGCAATTAA

Protein sequence

>Msa1329980

MKQMEKENSDECWRDLFLIGELSNGEMVLARKAKNQYTWKGFAAIPVALQELKEEGLWQNLNSSQEGGNEDVKVSDEEDEDELLSQTTGSQGESLSQPTGSQNDNLNPNSTFPRSLKNDRREKSLALLTQNFVKLFVCSNLEMISLDDAARLLLGDAYNSSTMRIPSGLAAKVRRLYDIANVLTSMNLIEKTHTTDTRKPAFRWLGLKGKTLNEASLYNSKQNDSRKRAFGNDVTNISFARNRTDLFMGGDFKKQKTMENDSGLCLEDVKQGIKQTSANYQFGPFAPAFVSKAGSSENKVKQVHDWESLATEHCPQYQNQGN*