AlfalfaGEDB | Msa0178560

M. sativa cultivar zhongmu-4 / Msa0178560

KEGG: -
GO: -
PFAM: PF00403.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0178560	sp\|A2RVM8\|HIP37_ARATH	43.056	360	137	11	1	339	1	313	1.34e-51	179

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0178560	A0A072VR18	96.021	377	12	1	1	377	1	374	0.0	747

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000050	Msa0178560	0.825431	4.705733e-54	-8.615850e-47
Msa0000510	Msa0178560	0.812226	4.715872e-51	-8.615850e-47
Msa0005890	Msa0178560	0.844579	6.928559e-59	-8.615850e-47
Msa0018160	Msa0178560	0.843585	1.280360e-58	-8.615850e-47
Msa0021500	Msa0178560	0.848015	8.021616e-60	-8.615850e-47
Msa0027280	Msa0178560	0.825439	4.684612e-54	-8.615850e-47
Msa0028420	Msa0178560	0.849958	2.315274e-60	-8.615850e-47
Msa0032430	Msa0178560	0.803653	3.145510e-49	-8.615850e-47
Msa0032960	Msa0178560	-0.800947	1.134472e-48	-8.615850e-47
Msa0034810	Msa0178560	0.816131	6.475996e-52	-8.615850e-47
Msa0036870	Msa0178560	0.855887	4.664919e-62	-8.615850e-47
Msa0042610	Msa0178560	0.861310	1.122307e-63	-8.615850e-47
Msa0047030	Msa0178560	0.817400	3.362755e-52	-8.615850e-47
Msa0052260	Msa0178560	0.843017	1.814981e-58	-8.615850e-47
Msa0054690	Msa0178560	0.804549	2.048352e-49	-8.615850e-47
Msa0061290	Msa0178560	0.811420	7.063820e-51	-8.615850e-47
Msa0081090	Msa0178560	0.830214	3.330832e-55	-8.615850e-47
Msa0081390	Msa0178560	0.822033	2.940260e-53	-8.615850e-47
Msa0081450	Msa0178560	0.825263	5.155888e-54	-8.615850e-47
Msa0089630	Msa0178560	0.834622	2.694820e-56	-8.615850e-47
Msa0090400	Msa0178560	0.837988	3.755943e-57	-8.615850e-47
Msa0092790	Msa0178560	0.815055	1.124319e-51	-8.615850e-47
Msa0094780	Msa0178560	0.808175	3.523596e-50	-8.615850e-47
Msa0097260	Msa0178560	0.826808	2.213965e-54	-8.615850e-47
Msa0115080	Msa0178560	0.803430	3.499612e-49	-8.615850e-47
Msa0117480	Msa0178560	0.809196	2.132828e-50	-8.615850e-47
Msa0122040	Msa0178560	0.802200	6.281584e-49	-8.615850e-47
Msa0124060	Msa0178560	0.835575	1.549730e-56	-8.615850e-47
Msa0125550	Msa0178560	0.834034	3.784842e-56	-8.615850e-47
Msa0136650	Msa0178560	0.804067	2.580639e-49	-8.615850e-47
Msa0137880	Msa0178560	0.811446	6.973490e-51	-8.615850e-47
Msa0146040	Msa0178560	0.845697	3.454118e-59	-8.615850e-47
Msa0152350	Msa0178560	0.800713	1.266572e-48	-8.615850e-47
Msa0168500	Msa0178560	0.841150	5.656912e-58	-8.615850e-47
Msa0173690	Msa0178560	0.821994	3.003361e-53	-8.615850e-47
Msa0174450	Msa0178560	0.814695	1.351442e-51	-8.615850e-47
Msa0175730	Msa0178560	0.800017	1.755839e-48	-8.615850e-47
Msa0178560	Msa0190570	0.807476	4.960949e-50	-8.615850e-47
Msa0178560	Msa0198050	0.805343	1.397172e-49	-8.615850e-47
Msa0178560	Msa0211030	0.830110	3.532246e-55	-8.615850e-47
Msa0178560	Msa0211150	0.814742	1.319803e-51	-8.615850e-47
Msa0178560	Msa0223080	0.833181	6.181868e-56	-8.615850e-47
Msa0178560	Msa0225100	0.823922	1.067244e-53	-8.615850e-47
Msa0178560	Msa0225860	0.841257	5.302870e-58	-8.615850e-47
Msa0178560	Msa0230740	0.824980	6.015475e-54	-8.615850e-47
Msa0178560	Msa0230750	0.818484	1.913270e-52	-8.615850e-47
Msa0178560	Msa0242590	0.811089	8.334778e-51	-8.615850e-47
Msa0178560	Msa0244640	0.821590	3.724061e-53	-8.615850e-47
Msa0178560	Msa0255090	0.821432	4.049431e-53	-8.615850e-47
Msa0178560	Msa0259380	0.814088	1.840518e-51	-8.615850e-47
Msa0178560	Msa0260510	0.803408	3.536523e-49	-8.615850e-47
Msa0178560	Msa0266180	0.801393	9.198172e-49	-8.615850e-47
Msa0178560	Msa0267110	0.817036	4.060783e-52	-8.615850e-47
Msa0178560	Msa0270340	0.806373	8.489401e-50	-8.615850e-47
Msa0178560	Msa0283330	0.802393	5.732132e-49	-8.615850e-47
Msa0178560	Msa0287740	0.825708	4.044629e-54	-8.615850e-47
Msa0178560	Msa0292330	0.812605	3.898556e-51	-8.615850e-47
Msa0178560	Msa0292400	0.815219	1.034191e-51	-8.615850e-47
Msa0178560	Msa0298470	0.828456	8.900082e-55	-8.615850e-47
Msa0178560	Msa0300270	0.807972	3.892529e-50	-8.615850e-47
Msa0178560	Msa0300320	0.808888	2.482130e-50	-8.615850e-47
Msa0178560	Msa0302160	0.825105	5.619099e-54	-8.615850e-47
Msa0178560	Msa0321620	0.806489	8.025193e-50	-8.615850e-47
Msa0178560	Msa0337700	0.825255	5.177951e-54	-8.615850e-47
Msa0178560	Msa0339490	0.826054	3.347936e-54	-8.615850e-47
Msa0178560	Msa0339500	0.827860	1.238839e-54	-8.615850e-47
Msa0178560	Msa0342310	0.821581	3.741266e-53	-8.615850e-47
Msa0178560	Msa0358890	0.807773	4.290748e-50	-8.615850e-47
Msa0178560	Msa0371030	0.807965	3.906018e-50	-8.615850e-47
Msa0178560	Msa0378720	0.815494	8.985297e-52	-8.615850e-47
Msa0178560	Msa0380620	0.801212	1.001688e-48	-8.615850e-47
Msa0178560	Msa0386090	0.802669	5.028503e-49	-8.615850e-47
Msa0178560	Msa0403950	0.800302	1.536396e-48	-8.615850e-47
Msa0178560	Msa0405130	0.804282	2.328445e-49	-8.615850e-47
Msa0178560	Msa0422050	0.805863	1.086800e-49	-8.615850e-47
Msa0178560	Msa0435210	0.801363	9.330316e-49	-8.615850e-47
Msa0178560	Msa0464380	0.804893	1.735612e-49	-8.615850e-47
Msa0178560	Msa0464680	0.805880	1.077869e-49	-8.615850e-47
Msa0178560	Msa0465410	0.814747	1.316415e-51	-8.615850e-47
Msa0178560	Msa0467490	0.839344	1.676070e-57	-8.615850e-47
Msa0178560	Msa0474520	0.803077	4.139813e-49	-8.615850e-47
Msa0178560	Msa0474730	0.809061	2.278702e-50	-8.615850e-47
Msa0178560	Msa0476650	0.814912	1.210092e-51	-8.615850e-47
Msa0178560	Msa0506950	0.819691	1.016717e-52	-8.615850e-47
Msa0178560	Msa0511270	0.822651	2.113498e-53	-8.615850e-47
Msa0178560	Msa0516170	0.800536	1.376302e-48	-8.615850e-47
Msa0178560	Msa0530780	0.859385	4.291099e-63	-8.615850e-47
Msa0178560	Msa0532070	0.812954	3.269677e-51	-8.615850e-47
Msa0178560	Msa0547900	0.806835	6.781709e-50	-8.615850e-47
Msa0178560	Msa0557460	0.804120	2.516244e-49	-8.615850e-47
Msa0178560	Msa0569200	0.832511	9.065309e-56	-8.615850e-47
Msa0178560	Msa0580370	0.861082	1.317053e-63	-8.615850e-47
Msa0178560	Msa0583830	0.808426	3.115712e-50	-8.615850e-47
Msa0178560	Msa0597790	0.817363	3.428045e-52	-8.615850e-47
Msa0178560	Msa0611210	0.814871	1.235511e-51	-8.615850e-47
Msa0178560	Msa0626450	0.831177	1.935681e-55	-8.615850e-47
Msa0178560	Msa0626490	0.829680	4.494658e-55	-8.615850e-47
Msa0178560	Msa0637560	0.806674	7.334072e-50	-8.615850e-47
Msa0178560	Msa0637580	0.805062	1.600291e-49	-8.615850e-47
Msa0178560	Msa0651550	0.821690	3.530074e-53	-8.615850e-47
Msa0178560	Msa0664600	0.830301	3.171640e-55	-8.615850e-47
Msa0178560	Msa0677410	0.816353	5.778262e-52	-8.615850e-47
Msa0178560	Msa0683470	0.805644	1.208633e-49	-8.615850e-47
Msa0178560	Msa0683570	0.814942	1.191169e-51	-8.615850e-47
Msa0178560	Msa0697160	0.828547	8.460108e-55	-8.615850e-47
Msa0178560	Msa0700460	0.807520	4.856617e-50	-8.615850e-47
Msa0178560	Msa0730430	0.831711	1.429500e-55	-8.615850e-47
Msa0178560	Msa0741220	0.818745	1.669620e-52	-8.615850e-47
Msa0178560	Msa0741650	0.802105	6.570006e-49	-8.615850e-47
Msa0178560	Msa0741840	0.830326	3.127708e-55	-8.615850e-47
Msa0178560	Msa0765840	0.800625	1.319809e-48	-8.615850e-47
Msa0178560	Msa0765910	0.808063	3.722142e-50	-8.615850e-47
Msa0178560	Msa0768990	0.800834	1.196516e-48	-8.615850e-47
Msa0178560	Msa0770720	0.821856	3.232365e-53	-8.615850e-47
Msa0178560	Msa0795870	0.849724	2.691647e-60	-8.615850e-47
Msa0178560	Msa0819170	0.803652	3.146981e-49	-8.615850e-47
Msa0178560	Msa0829300	0.808935	2.425022e-50	-8.615850e-47
Msa0178560	Msa0829330	0.800839	1.193611e-48	-8.615850e-47
Msa0178560	Msa0833650	0.860031	2.740959e-63	-8.615850e-47
Msa0178560	Msa0835490	0.820972	5.169943e-53	-8.615850e-47
Msa0178560	Msa0845440	0.816867	4.430927e-52	-8.615850e-47
Msa0178560	Msa0861510	0.816859	4.449243e-52	-8.615850e-47
Msa0178560	Msa0861600	0.821639	3.629078e-53	-8.615850e-47
Msa0178560	Msa0861850	0.808512	2.987186e-50	-8.615850e-47
Msa0178560	Msa0876190	0.809617	1.732201e-50	-8.615850e-47
Msa0178560	Msa0896540	0.801012	1.100752e-48	-8.615850e-47
Msa0178560	Msa0938120	0.813604	2.352917e-51	-8.615850e-47
Msa0178560	Msa0945110	0.818691	1.717389e-52	-8.615850e-47
Msa0178560	Msa0960600	0.803932	2.752984e-49	-8.615850e-47
Msa0178560	Msa0967870	0.813399	2.610961e-51	-8.615850e-47
Msa0178560	Msa0979730	0.802036	6.786641e-49	-8.615850e-47
Msa0178560	Msa1004840	0.804391	2.209903e-49	-8.615850e-47
Msa0178560	Msa1020670	0.801858	7.382643e-49	-8.615850e-47
Msa0178560	Msa1044680	0.807979	3.879036e-50	-8.615850e-47
Msa0178560	Msa1045140	0.849363	3.392285e-60	-8.615850e-47
Msa0178560	Msa1078170	0.815613	8.450300e-52	-8.615850e-47
Msa0178560	Msa1084960	0.828647	8.001718e-55	-8.615850e-47
Msa0178560	Msa1090140	0.815169	1.060870e-51	-8.615850e-47
Msa0178560	Msa1101090	0.811033	8.571859e-51	-8.615850e-47
Msa0178560	Msa1103990	0.827073	1.913595e-54	-8.615850e-47
Msa0178560	Msa1113340	0.806868	6.675547e-50	-8.615850e-47
Msa0178560	Msa1116220	0.804452	2.146120e-49	-8.615850e-47
Msa0178560	Msa1117920	0.805028	1.626509e-49	-8.615850e-47
Msa0178560	Msa1123380	0.801125	1.043546e-48	-8.615850e-47
Msa0178560	Msa1130230	0.807018	6.204793e-50	-8.615850e-47
Msa0178560	Msa1132840	0.864139	1.507501e-64	-8.615850e-47
Msa0178560	Msa1140210	0.828749	7.562176e-55	-8.615850e-47
Msa0178560	Msa1155170	-0.816941	4.266023e-52	-8.615850e-47
Msa0178560	Msa1161680	0.814904	1.214768e-51	-8.615850e-47
Msa0178560	Msa1171710	0.816528	5.280446e-52	-8.615850e-47
Msa0178560	Msa1177320	0.810025	1.415311e-50	-8.615850e-47
Msa0178560	Msa1186020	0.852671	3.961175e-61	-8.615850e-47
Msa0178560	Msa1196440	0.809383	1.944168e-50	-8.615850e-47
Msa0178560	Msa1200890	0.809846	1.546235e-50	-8.615850e-47
Msa0178560	Msa1205280	0.816175	6.333119e-52	-8.615850e-47
Msa0178560	Msa1206460	0.808717	2.699841e-50	-8.615850e-47
Msa0178560	Msa1208950	0.818579	1.820861e-52	-8.615850e-47
Msa0178560	Msa1209460	0.815650	8.291592e-52	-8.615850e-47
Msa0178560	Msa1225690	0.823526	1.321198e-53	-8.615850e-47
Msa0178560	Msa1226520	0.805640	1.211034e-49	-8.615850e-47
Msa0178560	Msa1228200	0.837799	4.199192e-57	-8.615850e-47
Msa0178560	Msa1236410	0.816913	4.327583e-52	-8.615850e-47
Msa0178560	Msa1242670	0.807843	4.146065e-50	-8.615850e-47
Msa0178560	Msa1243490	0.818044	2.406578e-52	-8.615850e-47
Msa0178560	Msa1282260	0.812003	5.274422e-51	-8.615850e-47
Msa0178560	Msa1297230	0.830187	3.382140e-55	-8.615850e-47
Msa0178560	Msa1298220	0.804731	1.876906e-49	-8.615850e-47
Msa0178560	Msa1314650	0.835370	1.746204e-56	-8.615850e-47
Msa0178560	Msa1321340	0.810517	1.108129e-50	-8.615850e-47
Msa0178560	Msa1329980	0.804981	1.663638e-49	-8.615850e-47
Msa0178560	Msa1330410	0.813043	3.125653e-51	-8.615850e-47
Msa0178560	Msa1343180	0.824624	7.297110e-54	-8.615850e-47
Msa0178560	Msa1343430	0.829387	5.297430e-55	-8.615850e-47
Msa0178560	Msa1347310	0.845665	3.524091e-59	-8.615850e-47
Msa0178560	Msa1363740	0.800724	1.259893e-48	-8.615850e-47
Msa0178560	Msa1372040	0.817431	3.309788e-52	-8.615850e-47
Msa0178560	Msa1372230	0.976197	2.287744e-141	-8.615850e-47
Msa0178560	Msa1390440	0.824763	6.768967e-54	-8.615850e-47
Msa0178560	Msa1396030	0.821645	3.616481e-53	-8.615850e-47
Msa0178560	Msa1397400	0.817021	4.092513e-52	-8.615850e-47
Msa0178560	Msa1398340	0.806041	9.971239e-50	-8.615850e-47
Msa0178560	Msa1414640	0.803613	3.206105e-49	-8.615850e-47
Msa0178560	Msa1437930	0.810228	1.279683e-50	-8.615850e-47
Msa0178560	Msa1440880	0.819968	8.790757e-53	-8.615850e-47
Msa0178560	Msa1440960	0.818081	2.361001e-52	-8.615850e-47
Msa0178560	Msa1446810	0.818387	2.012573e-52	-8.615850e-47
Msa0178560	Msa1446820	0.821103	4.822806e-53	-8.615850e-47
Msa0178560	Msa1451160	0.824804	6.616998e-54	-8.615850e-47
Msa0178560	Msa1454140	0.864661	1.035452e-64	-8.615850e-47
Msa0178560	Msa1464810	0.820602	6.287955e-53	-8.615850e-47
Msa0178560	Msa1465440	0.857854	1.229122e-62	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0178560	MtrunA17_Chr1g0208301	96.021	377	12	1	1	377	1	374	0.0	747
Msa0178560	MtrunA17_Chr2g0287751	71.429	77	19	1	1	77	1	74	4.80e-29	117
Msa0178560	MtrunA17_Chr0c22g0493881	69.231	78	21	1	1	78	1	75	3.00e-28	113
Msa0178560	MtrunA17_Chr4g0065651	69.231	78	21	1	1	78	1	75	4.67e-28	115
Msa0178560	MtrunA17_Chr4g0032861	83.051	59	10	0	269	327	2	60	1.54e-27	105
Msa0178560	MtrunA17_Chr4g0065621	69.231	78	21	1	1	78	1	75	4.10e-27	110
Msa0178560	MtrunA17_Chr7g0269081	67.606	71	23	0	7	77	16	86	1.78e-26	107
Msa0178560	MtrunA17_Chr1g0191671	44.848	165	60	6	1	143	1	156	5.86e-26	109
Msa0178560	MtrunA17_Chr3g0111541	42.982	114	59	1	10	123	9	116	4.81e-22	93.2
Msa0178560	MtrunA17_Chr4g0067291	50.000	92	36	1	10	91	71	162	8.11e-21	92.4
Msa0178560	MtrunA17_Chr7g0272571	59.091	66	27	0	12	77	32	97	1.41e-19	89.0
Msa0178560	MtrunA17_Chr2g0296001	60.000	70	28	0	10	79	70	139	6.60e-19	87.0
Msa0178560	MtrunA17_Chr2g0287741	63.636	66	24	0	16	81	18	83	1.63e-18	87.0
Msa0178560	MtrunA17_Chr1g0192131	53.425	73	33	1	10	81	12	84	5.61e-18	84.7
Msa0178560	MtrunA17_Chr3g0124411	50.746	67	33	0	11	77	28	94	2.00e-14	70.1
Msa0178560	MtrunA17_Chr8g0382721	51.562	64	31	0	14	77	30	93	1.78e-13	67.8
Msa0178560	MtrunA17_Chr1g0160201	43.939	66	37	0	12	77	24	89	3.27e-13	66.6
Msa0178560	MtrunA17_Chr3g0094841	37.634	93	55	2	12	103	115	205	1.32e-12	67.0
Msa0178560	MtrunA17_Chr7g0218981	39.437	71	43	0	13	83	4	74	2.27e-12	63.5
Msa0178560	MtrunA17_Chr5g0414621	47.619	84	36	2	94	169	629	712	2.66e-12	68.6
Msa0178560	MtrunA17_Chr5g0407821	39.394	66	40	0	12	77	22	87	3.93e-12	63.5
Msa0178560	MtrunA17_Chr2g0325601	39.726	73	43	1	17	89	6	77	6.93e-12	62.8
Msa0178560	MtrunA17_Chr4g0036931	40.845	71	41	1	8	77	23	93	7.19e-12	63.2
Msa0178560	MtrunA17_Chr1g0189221	39.706	68	41	0	10	77	50	117	8.69e-12	63.5
Msa0178560	MtrunA17_Chr3g0145621	39.706	68	40	1	11	77	24	91	3.25e-11	61.2
Msa0178560	MtrunA17_Chr1g0198341	40.000	65	39	0	13	77	4	68	6.66e-11	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0178560	AT1G23000.1	43.056	360	137	11	1	339	1	313	1.36e-52	179
Msa0178560	AT1G23000.2	43.056	360	137	11	1	339	61	373	4.57e-52	179
Msa0178560	AT3G06130.2	67.742	93	26	2	1	92	1	90	5.76e-33	126
Msa0178560	AT3G06130.1	67.742	93	26	2	1	92	1	90	1.48e-32	127
Msa0178560	AT5G19090.2	66.667	90	24	2	1	87	1	87	7.37e-31	122
Msa0178560	AT5G19090.3	66.667	90	24	2	1	87	1	87	7.37e-31	122
Msa0178560	AT5G19090.5	66.667	90	24	2	1	87	1	87	1.72e-30	123
Msa0178560	AT5G19090.4	66.667	90	24	2	1	87	1	87	1.72e-30	123
Msa0178560	AT5G19090.1	66.667	90	24	2	1	87	1	87	1.72e-30	123
Msa0178560	AT5G27690.1	51.807	83	39	1	5	86	21	103	1.53e-23	100
Msa0178560	AT3G05220.1	62.319	69	26	0	9	77	6	74	7.35e-23	100
Msa0178560	AT5G37860.1	31.020	245	142	9	12	254	9	228	1.61e-17	82.0
Msa0178560	AT1G56210.1	52.239	67	32	0	13	79	40	106	6.46e-16	79.0
Msa0178560	AT1G06330.1	43.939	66	37	0	12	77	1	66	1.58e-13	68.2
Msa0178560	AT3G56891.1	42.623	61	35	0	17	77	20	80	2.28e-12	65.1
Msa0178560	AT1G71050.1	40.909	66	39	0	12	77	27	92	1.19e-11	62.8
Msa0178560	AT3G56891.2	43.636	55	31	0	23	77	3	57	1.37e-11	62.4
Msa0178560	AT2G18196.1	39.706	68	41	0	10	77	43	110	1.68e-11	63.2
Msa0178560	AT5G66110.3	38.028	71	43	1	8	77	14	84	7.86e-11	60.5
Msa0178560	AT5G66110.1	38.028	71	43	1	8	77	14	84	7.86e-11	60.5

Find 95 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TACTATACTAACTTAGAAAA+TGG	0.132364	1_4:+65910718	None:intergenic
TTCATAACCATGTTCTGATT+TGG	0.207548	1_4:+65911356	None:intergenic
CAGCAGAAGGTAACAGTTTC+AGG	0.218037	1_4:-65911776	Msa0178560:CDS
TCATAACCATGTTCTGATTT+GGG	0.272787	1_4:+65911357	None:intergenic
ATAGTAGTTTGACTGTAATT+TGG	0.290054	1_4:-65910701	Msa0178560:three_prime_UTR
GCTGGTAGTGCTACTGTTCT+AGG	0.303996	1_4:-65911161	Msa0178560:CDS
TTAACATAGATGGTGGATAT+TGG	0.307758	1_4:+65911063	None:intergenic
CAATACTCAATTGGCTCAAT+TGG	0.318171	1_4:-65911282	Msa0178560:CDS
ACCAATGTCACTCGCCCTTT+TGG	0.321785	1_4:+65911229	None:intergenic
GGTGGAAATTCCAATGGTTT+AGG	0.330691	1_4:-65911140	Msa0178560:CDS
TTCATGTTCATTAACATAGA+TGG	0.342463	1_4:+65911053	None:intergenic
CTTTAGCATCTGAAAATGAT+TGG	0.354821	1_4:+65911466	None:intergenic
ATGAAGAGATGCGGTTCATC+AGG	0.357851	1_4:-65911496	Msa0178560:CDS
TTTGCATAGGAGTAATTTGC+AGG	0.391852	1_4:+65910891	None:intergenic
GTCAAAGATGACAAGAATAA+AGG	0.400209	1_4:-65911638	Msa0178560:CDS
TGGTGGGACAGGTTTGTGTT+AGG	0.406147	1_4:-65910681	Msa0178560:three_prime_UTR
TGATGAGGAAGAGGAGGAGG+AGG	0.411229	1_4:-65911519	Msa0178560:CDS
AAACTCCTTCAGAGAATTGA+AGG	0.417205	1_4:-65912338	Msa0178560:intron
GTTATGAAGGAAGGTGCTAA+TGG	0.420368	1_4:-65911341	Msa0178560:CDS
ACAGGTTTGTGTTAGGATGT+TGG	0.428194	1_4:-65910674	Msa0178560:three_prime_UTR
GAAGTTGAACAATACTCAAT+TGG	0.428232	1_4:-65911291	Msa0178560:CDS
CCAGTAACAAAACCACCATT+TGG	0.437509	1_4:+65911086	None:intergenic
AAAGTAATGCAGTGAGAGAA+GGG	0.441347	1_4:+65912967	None:intergenic
ATATGATGAGGAAGAGGAGG+AGG	0.443899	1_4:-65911522	Msa0178560:CDS
ATCAAGAAACTAGTAAGATC+TGG	0.446205	1_4:-65911731	Msa0178560:CDS
ATAATATTCATCATCCTCTT+CGG	0.450964	1_4:+65911547	None:intergenic
TTGTAATAATAGCCAGTGTT+AGG	0.451520	1_4:+65910930	None:intergenic
TGACTGTAATTTGGTGGGAC+AGG	0.451908	1_4:-65910692	Msa0178560:three_prime_UTR
ACTATACTAACTTAGAAAAT+GGG	0.452023	1_4:+65910719	None:intergenic
CTTTAAGCTCCTTAAAATCC+AGG	0.466184	1_4:-65912593	Msa0178560:intron
TAACTTAGAAAATGGGACTT+AGG	0.477877	1_4:+65910726	None:intergenic
AATGCTGGCAATGGAAATAG+TGG	0.481459	1_4:-65911392	Msa0178560:CDS
AGAGTGCAAGGGAAGTGAAA+AGG	0.485974	1_4:+65912924	None:intergenic
AATGGAAATAGTGGCAAGAA+AGG	0.499764	1_4:-65911383	Msa0178560:CDS
ACTCAATTGGCTCAATTGGT+TGG	0.501344	1_4:-65911278	Msa0178560:CDS
TCTATGTTAATGAACATGAA+TGG	0.505347	1_4:-65911050	Msa0178560:CDS
TTATGAAGGAAGGTGCTAAT+GGG	0.505662	1_4:-65911340	Msa0178560:CDS
AAATCAGAACATGGTTATGA+AGG	0.507037	1_4:-65911354	Msa0178560:CDS
AAAAGTAATGCAGTGAGAGA+AGG	0.507323	1_4:+65912966	None:intergenic
TTACATTATTGAACAGCTGC+TGG	0.507630	1_4:+65910809	None:intergenic
GTGAGAGAAGGGAAGAGTAA+TGG	0.507818	1_4:+65912978	None:intergenic
TCAACCTTGGAGAATCCAAA+AGG	0.510252	1_4:-65911244	Msa0178560:CDS
TCCACTGCATCTATTCCAAA+TGG	0.510572	1_4:-65911101	Msa0178560:CDS
TCCAAAAGGGCGAGTGACAT+TGG	0.516238	1_4:-65911230	Msa0178560:CDS
GTTCTGCATCTATTTGAACT+TGG	0.517770	1_4:+65911798	None:intergenic
GGGAACAATAACAATGGTGC+TGG	0.520248	1_4:-65911179	Msa0178560:CDS
GATGCAAACAATGTGAAGAA+AGG	0.525694	1_4:-65911434	Msa0178560:CDS
TCTATCTATTATCTACTACT+AGG	0.526145	1_4:-65912735	Msa0178560:intron
TTAAAAGGAGAAAGAGTGCA+AGG	0.528470	1_4:+65912912	None:intergenic
GGTGCTATGATGAATTTAGC+TGG	0.532345	1_4:-65911209	Msa0178560:CDS
GGAAATTCCAATGGTTTAGG+AGG	0.533330	1_4:-65911137	Msa0178560:CDS
AGTGACCTTCAATTCTCTGA+AGG	0.534789	1_4:+65912333	None:intergenic
TGAATATGATGAGGAAGAGG+AGG	0.535580	1_4:-65911525	Msa0178560:CDS
CCAGTGTTAGGAGGAACAAA+AGG	0.539360	1_4:+65910942	None:intergenic
AAGATGAACAATGCTGGCAA+TGG	0.540672	1_4:-65911401	Msa0178560:CDS
GTTCTAGGTGGAAATTCCAA+TGG	0.542544	1_4:-65911146	Msa0178560:CDS
TTATGAATATGATGAGGAAG+AGG	0.546136	1_4:-65911528	Msa0178560:CDS
CTGGAAAATATGCTGAGCTC+TGG	0.547828	1_4:-65911712	Msa0178560:CDS
TAAAAGGAGAAAGAGTGCAA+GGG	0.551768	1_4:+65912913	None:intergenic
TAGTTTGACTGTAATTTGGT+GGG	0.552324	1_4:-65910697	Msa0178560:three_prime_UTR
AGCCTCAGATGATGTATCAC+AGG	0.555215	1_4:-65910968	Msa0178560:CDS
CAGAACATGGTTATGAAGGA+AGG	0.555580	1_4:-65911350	Msa0178560:CDS
ATCTTCATTGATGAACATGC+AGG	0.556065	1_4:-65911012	Msa0178560:CDS
TGCATGTTCATCAATGAAGA+TGG	0.558115	1_4:+65911014	None:intergenic
GTAGTTTGACTGTAATTTGG+TGG	0.562864	1_4:-65910698	Msa0178560:three_prime_UTR
TCCTCTTCGGAACTAAAAGC+CGG	0.563236	1_4:+65911560	None:intergenic
ATAGCTAAGATGAACAATGC+TGG	0.570218	1_4:-65911407	Msa0178560:CDS
ATGTTCATTAACATAGATGG+TGG	0.570507	1_4:+65911056	None:intergenic
AGGAAAACCTCCTAAACCAT+TGG	0.574088	1_4:+65911130	None:intergenic
TGCAAATGCTTGTTATCCAA+CGG	0.576996	1_4:-65910874	Msa0178560:CDS
GTGTAGTAGTTGAGATGATG+TGG	0.580946	1_4:-65910607	None:intergenic
AATAGATGCAGAACAGCAGA+AGG	0.582210	1_4:-65911789	Msa0178560:CDS
CAACCTTGGAGAATCCAAAA+GGG	0.584061	1_4:-65911243	Msa0178560:CDS
ATAGATGCAGTGGATCCTGC+AGG	0.590027	1_4:+65911110	None:intergenic
TAATAATAGCCAGTGTTAGG+AGG	0.598615	1_4:+65910933	None:intergenic
ACCATTTGGAATAGATGCAG+TGG	0.604596	1_4:+65911100	None:intergenic
TGGATAACAAGCATTTGCAT+AGG	0.605903	1_4:+65910878	None:intergenic
GCAAACAAAACAAAGGCACA+TGG	0.606102	1_4:+65912866	None:intergenic
ACTGCATCTATTCCAAATGG+TGG	0.607866	1_4:-65911098	Msa0178560:CDS
TGAAGAGATGCGGTTCATCA+GGG	0.610395	1_4:-65911495	Msa0178560:CDS
CTGCTGCTATTACTAGCTAG+TGG	0.612378	1_4:+65912782	None:intergenic
GGTAATGAAAGTCTCAACCT+TGG	0.624155	1_4:-65911257	Msa0178560:CDS
TTTAATGGGAACAATAACAA+TGG	0.630005	1_4:-65911185	Msa0178560:CDS
TGGGATTGATCAGAAAACAA+TGG	0.638544	1_4:-65911321	Msa0178560:CDS
AAAGTGAACATTCACTGTGA+TGG	0.643761	1_4:-65912380	Msa0178560:CDS
CTCGAAAGCAAACAAAACAA+AGG	0.646036	1_4:+65912859	None:intergenic
AGGAAACCCAAATCAGAACA+TGG	0.652284	1_4:-65911363	Msa0178560:CDS
AGGAGGAGGATGAAGAGATG+CGG	0.665296	1_4:-65911505	Msa0178560:CDS
GCTGCAGAGTGATCCTCCGT+TGG	0.673839	1_4:+65910858	None:intergenic
CAAACAAAACAAAGGCACAT+GGG	0.674537	1_4:+65912867	None:intergenic
GACCTGTGATACATCATCTG+AGG	0.691567	1_4:+65910966	None:intergenic
TGTAGTAGTTGAGATGATGT+GGG	0.709018	1_4:-65910606	None:intergenic
AAATGCTTGTTATCCAACGG+AGG	0.712494	1_4:-65910871	Msa0178560:CDS
GGTAGTGCTACTGTTCTAGG+TGG	0.717323	1_4:-65911158	Msa0178560:CDS
TGAATATTATGAATATGATG+AGG	0.721112	1_4:-65911534	Msa0178560:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GCATAAAAATAAATTTTAAA+AGG	+	chr1_4:65910735-65910754	None:intergenic	10.0%
!!!	GCATAAAAATAAATTTTAAA+AGG	+	chr1_4:65910735-65910754	None:intergenic	10.0%
!!!	TTTATGGATAATTTTAACAA+GGG	+	chr1_4:65911074-65911093	None:intergenic	15.0%
!!!	TTTTATGGATAATTTTAACA+AGG	+	chr1_4:65911075-65911094	None:intergenic	15.0%
!!	ACTAAACTAAAATAATAGAA+GGG	+	chr1_4:65911144-65911163	None:intergenic	15.0%
!!	AACTAAACTAAAATAATAGA+AGG	+	chr1_4:65911145-65911164	None:intergenic	15.0%
!!	AAAAAAAAAGACCAAATATT+AGG	+	chr1_4:65911169-65911188	None:intergenic	15.0%
!!!	TTTATGGATAATTTTAACAA+GGG	+	chr1_4:65911074-65911093	None:intergenic	15.0%
!!!	TTTTATGGATAATTTTAACA+AGG	+	chr1_4:65911075-65911094	None:intergenic	15.0%
!!	ACTAAACTAAAATAATAGAA+GGG	+	chr1_4:65911144-65911163	None:intergenic	15.0%
!!	AACTAAACTAAAATAATAGA+AGG	+	chr1_4:65911145-65911164	None:intergenic	15.0%
!!	AAAAAAAAAGACCAAATATT+AGG	+	chr1_4:65911169-65911188	None:intergenic	15.0%
!!!	TTATGGATAATTTTAACAAG+GGG	+	chr1_4:65911073-65911092	None:intergenic	20.0%
!!!	TAGTTTAGTTTCCTAATATT+TGG	-	chr1_4:65911155-65911174	Msa0178560:CDS	20.0%
!!!	ATTTTAACTTCAAGAAAACA+AGG	+	chr1_4:65911389-65911408	None:intergenic	20.0%
!!	TTTCTTGAAGTTAAAATGTA+CGG	-	chr1_4:65911392-65911411	Msa0178560:CDS	20.0%
!!	AATATAAAAATATCCAAGCA+CGG	+	chr1_4:65911784-65911803	None:intergenic	20.0%
!!	TGAATATTATGAATATGATG+AGG	-	chr1_4:65912095-65912114	Msa0178560:intron	20.0%
!!	ACTATACTAACTTAGAAAAT+GGG	+	chr1_4:65912913-65912932	None:intergenic	20.0%
!!	TACTATACTAACTTAGAAAA+TGG	+	chr1_4:65912914-65912933	None:intergenic	20.0%
!!!	TTATGGATAATTTTAACAAG+GGG	+	chr1_4:65911073-65911092	None:intergenic	20.0%
!!!	TAGTTTAGTTTCCTAATATT+TGG	-	chr1_4:65911155-65911174	Msa0178560:CDS	20.0%
!!!	ATTTTAACTTCAAGAAAACA+AGG	+	chr1_4:65911389-65911408	None:intergenic	20.0%
!!	TTTCTTGAAGTTAAAATGTA+CGG	-	chr1_4:65911392-65911411	Msa0178560:CDS	20.0%
!!	AATATAAAAATATCCAAGCA+CGG	+	chr1_4:65911784-65911803	None:intergenic	20.0%
!!	TGAATATTATGAATATGATG+AGG	-	chr1_4:65912095-65912114	Msa0178560:intron	20.0%
!!	ACTATACTAACTTAGAAAAT+GGG	+	chr1_4:65912913-65912932	None:intergenic	20.0%
!!	TACTATACTAACTTAGAAAA+TGG	+	chr1_4:65912914-65912933	None:intergenic	20.0%
!	TCTATCTATTATCTACTACT+AGG	-	chr1_4:65910894-65910913	Msa0178560:CDS	25.0%
!	GCAAATGGTAAAACTAAAAA+AGG	+	chr1_4:65910946-65910965	None:intergenic	25.0%
!!!	AGCATGTTGTTTTAGTTTTA+TGG	+	chr1_4:65911090-65911109	None:intergenic	25.0%
!	TAAAATAATAGAAGGGAGAA+GGG	+	chr1_4:65911137-65911156	None:intergenic	25.0%
!!	TTTAGTTTACTCACAATGAT+GGG	-	chr1_4:65911488-65911507	Msa0178560:CDS	25.0%
!	TTAAAGGGAGACATAAAAAA+TGG	-	chr1_4:65911533-65911552	Msa0178560:CDS	25.0%
!!!	GCTACTTTTTAAATCTTCAA+TGG	-	chr1_4:65911609-65911628	Msa0178560:CDS	25.0%
!	TAAACACCTATAGAACAAAA+GGG	+	chr1_4:65911811-65911830	None:intergenic	25.0%
!	AAGAATAAAGGACAAAAACA+AGG	-	chr1_4:65912003-65912022	Msa0178560:intron	25.0%
!	ATAATATTCATCATCCTCTT+CGG	+	chr1_4:65912085-65912104	None:intergenic	25.0%
!!!	ATGAATTTAGCTGGTTTTAA+TGG	-	chr1_4:65912429-65912448	Msa0178560:intron	25.0%
!!!	TGAATTTAGCTGGTTTTAAT+GGG	-	chr1_4:65912430-65912449	Msa0178560:intron	25.0%
!	TTTAATGGGAACAATAACAA+TGG	-	chr1_4:65912444-65912463	Msa0178560:intron	25.0%
!	TTCATGTTCATTAACATAGA+TGG	+	chr1_4:65912579-65912598	None:intergenic	25.0%
!	TCTATGTTAATGAACATGAA+TGG	-	chr1_4:65912579-65912598	Msa0178560:intron	25.0%
!	ATTGTAGAGTTAAAAAGTGA+AGG	-	chr1_4:65912851-65912870	Msa0178560:five_prime_UTR	25.0%
!	ATAGTAGTTTGACTGTAATT+TGG	-	chr1_4:65912928-65912947	Msa0178560:five_prime_UTR	25.0%
!	TCTATCTATTATCTACTACT+AGG	-	chr1_4:65910894-65910913	Msa0178560:CDS	25.0%
!	GCAAATGGTAAAACTAAAAA+AGG	+	chr1_4:65910946-65910965	None:intergenic	25.0%
!!!	AGCATGTTGTTTTAGTTTTA+TGG	+	chr1_4:65911090-65911109	None:intergenic	25.0%
!	TAAAATAATAGAAGGGAGAA+GGG	+	chr1_4:65911137-65911156	None:intergenic	25.0%
!!	TTTAGTTTACTCACAATGAT+GGG	-	chr1_4:65911488-65911507	Msa0178560:CDS	25.0%
!	TTAAAGGGAGACATAAAAAA+TGG	-	chr1_4:65911533-65911552	Msa0178560:CDS	25.0%
!!!	GCTACTTTTTAAATCTTCAA+TGG	-	chr1_4:65911609-65911628	Msa0178560:CDS	25.0%
!	TAAACACCTATAGAACAAAA+GGG	+	chr1_4:65911811-65911830	None:intergenic	25.0%
!	AAGAATAAAGGACAAAAACA+AGG	-	chr1_4:65912003-65912022	Msa0178560:intron	25.0%
!	ATAATATTCATCATCCTCTT+CGG	+	chr1_4:65912085-65912104	None:intergenic	25.0%
!!!	ATGAATTTAGCTGGTTTTAA+TGG	-	chr1_4:65912429-65912448	Msa0178560:intron	25.0%
!!!	TGAATTTAGCTGGTTTTAAT+GGG	-	chr1_4:65912430-65912449	Msa0178560:intron	25.0%
!	TTTAATGGGAACAATAACAA+TGG	-	chr1_4:65912444-65912463	Msa0178560:intron	25.0%
!	TTCATGTTCATTAACATAGA+TGG	+	chr1_4:65912579-65912598	None:intergenic	25.0%
!	TCTATGTTAATGAACATGAA+TGG	-	chr1_4:65912579-65912598	Msa0178560:intron	25.0%
!	ATTGTAGAGTTAAAAAGTGA+AGG	-	chr1_4:65912851-65912870	Msa0178560:five_prime_UTR	25.0%
!	ATAGTAGTTTGACTGTAATT+TGG	-	chr1_4:65912928-65912947	Msa0178560:five_prime_UTR	25.0%
!!!	CTCACTGCATTACTTTTTAT+TGG	-	chr1_4:65910669-65910688	Msa0178560:three_prime_UTR	30.0%
	TGTTTGCAAGGAAAAGAATA+AGG	+	chr1_4:65910982-65911001	None:intergenic	30.0%
!!!	CAAGTTTTTTTCTGTTTGCA+AGG	+	chr1_4:65910994-65911013	None:intergenic	30.0%
	AAAATAATAGAAGGGAGAAG+GGG	+	chr1_4:65911136-65911155	None:intergenic	30.0%
	CTAAAATAATAGAAGGGAGA+AGG	+	chr1_4:65911138-65911157	None:intergenic	30.0%
!	GTTTAGTTTACTCACAATGA+TGG	-	chr1_4:65911487-65911506	Msa0178560:CDS	30.0%
	TTAGTTTACTCACAATGATG+GGG	-	chr1_4:65911489-65911508	Msa0178560:CDS	30.0%
	TTAACTCGCATGACTTATAA+AGG	+	chr1_4:65911517-65911536	None:intergenic	30.0%
	TTATAAGTCATGCGAGTTAA+AGG	-	chr1_4:65911517-65911536	Msa0178560:CDS	30.0%
	TATAAGTCATGCGAGTTAAA+GGG	-	chr1_4:65911518-65911537	Msa0178560:CDS	30.0%
	AAATCTTCAATGGAAAGCTT+AGG	-	chr1_4:65911619-65911638	Msa0178560:CDS	30.0%
	ATACCTTAGTGTACACTATA+TGG	-	chr1_4:65911702-65911721	Msa0178560:CDS	30.0%
	TATCCATATAGTGTACACTA+AGG	+	chr1_4:65911708-65911727	None:intergenic	30.0%
	TAGTGTACACTATATGGATA+TGG	-	chr1_4:65911708-65911727	Msa0178560:CDS	30.0%
	GGTTAATGTAAACATCACAT+TGG	-	chr1_4:65911729-65911748	Msa0178560:CDS	30.0%
!!!	AATTTTTTTTTTGCCGTGCT+TGG	-	chr1_4:65911768-65911787	Msa0178560:CDS	30.0%
!	TTTTGACCCTTTTGTTCTAT+AGG	-	chr1_4:65911802-65911821	Msa0178560:CDS	30.0%
	GTAAACACCTATAGAACAAA+AGG	+	chr1_4:65911812-65911831	None:intergenic	30.0%
	ATCAAGAAACTAGTAAGATC+TGG	-	chr1_4:65911898-65911917	Msa0178560:intron	30.0%
!!	CTTTTGATTCTGATTGTTGT+TGG	+	chr1_4:65911953-65911972	None:intergenic	30.0%
	GTCAAAGATGACAAGAATAA+AGG	-	chr1_4:65911991-65912010	Msa0178560:intron	30.0%
	CAAAAATCAGCAGAAATTTC+CGG	-	chr1_4:65912050-65912069	Msa0178560:intron	30.0%
	TTATGAATATGATGAGGAAG+AGG	-	chr1_4:65912101-65912120	Msa0178560:intron	30.0%
	CTTTAGCATCTGAAAATGAT+TGG	+	chr1_4:65912166-65912185	None:intergenic	30.0%
	TCATAACCATGTTCTGATTT+GGG	+	chr1_4:65912275-65912294	None:intergenic	30.0%
	TTCATAACCATGTTCTGATT+TGG	+	chr1_4:65912276-65912295	None:intergenic	30.0%
	AAATCAGAACATGGTTATGA+AGG	-	chr1_4:65912275-65912294	Msa0178560:intron	30.0%
	GAAGTTGAACAATACTCAAT+TGG	-	chr1_4:65912338-65912357	Msa0178560:intron	30.0%
!!	TTAACATAGATGGTGGATAT+TGG	+	chr1_4:65912569-65912588	None:intergenic	30.0%
	ATGTTCATTAACATAGATGG+TGG	+	chr1_4:65912576-65912595	None:intergenic	30.0%
	TTGTAATAATAGCCAGTGTT+AGG	+	chr1_4:65912702-65912721	None:intergenic	30.0%
	GAAGGAAAAAAGATGCAAAA+TGG	-	chr1_4:65912869-65912888	Msa0178560:five_prime_UTR	30.0%
	TAACTTAGAAAATGGGACTT+AGG	+	chr1_4:65912906-65912925	None:intergenic	30.0%
	TAGTTTGACTGTAATTTGGT+GGG	-	chr1_4:65912932-65912951	Msa0178560:five_prime_UTR	30.0%
!!!	CTCACTGCATTACTTTTTAT+TGG	-	chr1_4:65910669-65910688	Msa0178560:three_prime_UTR	30.0%
	TGTTTGCAAGGAAAAGAATA+AGG	+	chr1_4:65910982-65911001	None:intergenic	30.0%
!!!	CAAGTTTTTTTCTGTTTGCA+AGG	+	chr1_4:65910994-65911013	None:intergenic	30.0%
	AAAATAATAGAAGGGAGAAG+GGG	+	chr1_4:65911136-65911155	None:intergenic	30.0%
	CTAAAATAATAGAAGGGAGA+AGG	+	chr1_4:65911138-65911157	None:intergenic	30.0%
!	GTTTAGTTTACTCACAATGA+TGG	-	chr1_4:65911487-65911506	Msa0178560:CDS	30.0%
	TTAGTTTACTCACAATGATG+GGG	-	chr1_4:65911489-65911508	Msa0178560:CDS	30.0%
	TTAACTCGCATGACTTATAA+AGG	+	chr1_4:65911517-65911536	None:intergenic	30.0%
	TTATAAGTCATGCGAGTTAA+AGG	-	chr1_4:65911517-65911536	Msa0178560:CDS	30.0%
	TATAAGTCATGCGAGTTAAA+GGG	-	chr1_4:65911518-65911537	Msa0178560:CDS	30.0%
	AAATCTTCAATGGAAAGCTT+AGG	-	chr1_4:65911619-65911638	Msa0178560:CDS	30.0%
	ATACCTTAGTGTACACTATA+TGG	-	chr1_4:65911702-65911721	Msa0178560:CDS	30.0%
	TATCCATATAGTGTACACTA+AGG	+	chr1_4:65911708-65911727	None:intergenic	30.0%
	TAGTGTACACTATATGGATA+TGG	-	chr1_4:65911708-65911727	Msa0178560:CDS	30.0%
	GGTTAATGTAAACATCACAT+TGG	-	chr1_4:65911729-65911748	Msa0178560:CDS	30.0%
!!!	AATTTTTTTTTTGCCGTGCT+TGG	-	chr1_4:65911768-65911787	Msa0178560:CDS	30.0%
!	TTTTGACCCTTTTGTTCTAT+AGG	-	chr1_4:65911802-65911821	Msa0178560:CDS	30.0%
	GTAAACACCTATAGAACAAA+AGG	+	chr1_4:65911812-65911831	None:intergenic	30.0%
	ATCAAGAAACTAGTAAGATC+TGG	-	chr1_4:65911898-65911917	Msa0178560:intron	30.0%
!!	CTTTTGATTCTGATTGTTGT+TGG	+	chr1_4:65911953-65911972	None:intergenic	30.0%
	GTCAAAGATGACAAGAATAA+AGG	-	chr1_4:65911991-65912010	Msa0178560:intron	30.0%
	CAAAAATCAGCAGAAATTTC+CGG	-	chr1_4:65912050-65912069	Msa0178560:intron	30.0%
	TTATGAATATGATGAGGAAG+AGG	-	chr1_4:65912101-65912120	Msa0178560:intron	30.0%
	CTTTAGCATCTGAAAATGAT+TGG	+	chr1_4:65912166-65912185	None:intergenic	30.0%
	TCATAACCATGTTCTGATTT+GGG	+	chr1_4:65912275-65912294	None:intergenic	30.0%
	TTCATAACCATGTTCTGATT+TGG	+	chr1_4:65912276-65912295	None:intergenic	30.0%
	AAATCAGAACATGGTTATGA+AGG	-	chr1_4:65912275-65912294	Msa0178560:intron	30.0%
	GAAGTTGAACAATACTCAAT+TGG	-	chr1_4:65912338-65912357	Msa0178560:intron	30.0%
!!	TTAACATAGATGGTGGATAT+TGG	+	chr1_4:65912569-65912588	None:intergenic	30.0%
	ATGTTCATTAACATAGATGG+TGG	+	chr1_4:65912576-65912595	None:intergenic	30.0%
	TTGTAATAATAGCCAGTGTT+AGG	+	chr1_4:65912702-65912721	None:intergenic	30.0%
	GAAGGAAAAAAGATGCAAAA+TGG	-	chr1_4:65912869-65912888	Msa0178560:five_prime_UTR	30.0%
	TAACTTAGAAAATGGGACTT+AGG	+	chr1_4:65912906-65912925	None:intergenic	30.0%
	TAGTTTGACTGTAATTTGGT+GGG	-	chr1_4:65912932-65912951	Msa0178560:five_prime_UTR	30.0%
	AAAGTAATGCAGTGAGAGAA+GGG	+	chr1_4:65910665-65910684	None:intergenic	35.0%
	AAAAGTAATGCAGTGAGAGA+AGG	+	chr1_4:65910666-65910685	None:intergenic	35.0%
!	TAAAAGGAGAAAGAGTGCAA+GGG	+	chr1_4:65910719-65910738	None:intergenic	35.0%
!	TTAAAAGGAGAAAGAGTGCA+AGG	+	chr1_4:65910720-65910739	None:intergenic	35.0%
!	CAAACAAAACAAAGGCACAT+GGG	+	chr1_4:65910765-65910784	None:intergenic	35.0%
	CTCGAAAGCAAACAAAACAA+AGG	+	chr1_4:65910773-65910792	None:intergenic	35.0%
	TGCAAGGAAAAGAATAAGGT+AGG	+	chr1_4:65910978-65910997	None:intergenic	35.0%
	CTTTAAGCTCCTTAAAATCC+AGG	-	chr1_4:65911036-65911055	Msa0178560:CDS	35.0%
!!!	AAAGAGGTACCTGGATTTTA+AGG	+	chr1_4:65911048-65911067	None:intergenic	35.0%
!!	ATTTTAACAAGGGGAGAAAG+AGG	+	chr1_4:65911064-65911083	None:intergenic	35.0%
	AAATAATAGAAGGGAGAAGG+GGG	+	chr1_4:65911135-65911154	None:intergenic	35.0%
	AAAGTGAACATTCACTGTGA+TGG	-	chr1_4:65911249-65911268	Msa0178560:CDS	35.0%
	AAACTCCTTCAGAGAATTGA+AGG	-	chr1_4:65911291-65911310	Msa0178560:CDS	35.0%
!!	AACTGTTTTGTTGCAACAAG+TGG	-	chr1_4:65911575-65911594	Msa0178560:CDS	35.0%
	TGGAAAGCTTAGGCTATAAA+AGG	-	chr1_4:65911629-65911648	Msa0178560:CDS	35.0%
	GTTCTGCATCTATTTGAACT+TGG	+	chr1_4:65911834-65911853	None:intergenic	35.0%
	TAAAGGACAAAAACAAGGAC+TGG	-	chr1_4:65912008-65912027	Msa0178560:intron	35.0%
!!	AAAAACAAGGACTGGTCAAA+GGG	-	chr1_4:65912016-65912035	Msa0178560:intron	35.0%
	GATGCAAACAATGTGAAGAA+AGG	-	chr1_4:65912195-65912214	Msa0178560:intron	35.0%
	ATAGCTAAGATGAACAATGC+TGG	-	chr1_4:65912222-65912241	Msa0178560:intron	35.0%
	AATGGAAATAGTGGCAAGAA+AGG	-	chr1_4:65912246-65912265	Msa0178560:intron	35.0%
!!	TTATGAAGGAAGGTGCTAAT+GGG	-	chr1_4:65912289-65912308	Msa0178560:intron	35.0%
	TGGGATTGATCAGAAAACAA+TGG	-	chr1_4:65912308-65912327	Msa0178560:intron	35.0%
!	CAATACTCAATTGGCTCAAT+TGG	-	chr1_4:65912347-65912366	Msa0178560:CDS	35.0%
	TGCATGTTCATCAATGAAGA+TGG	+	chr1_4:65912618-65912637	None:intergenic	35.0%
	ATCTTCATTGATGAACATGC+AGG	-	chr1_4:65912617-65912636	Msa0178560:exon	35.0%
	TAATAATAGCCAGTGTTAGG+AGG	+	chr1_4:65912699-65912718	None:intergenic	35.0%
!	TTTGCATAGGAGTAATTTGC+AGG	+	chr1_4:65912741-65912760	None:intergenic	35.0%
	TGGATAACAAGCATTTGCAT+AGG	+	chr1_4:65912754-65912773	None:intergenic	35.0%
!!	TGCAAATGCTTGTTATCCAA+CGG	-	chr1_4:65912755-65912774	Msa0178560:five_prime_UTR	35.0%
	TTACATTATTGAACAGCTGC+TGG	+	chr1_4:65912823-65912842	None:intergenic	35.0%
	GTAGTTTGACTGTAATTTGG+TGG	-	chr1_4:65912931-65912950	Msa0178560:five_prime_UTR	35.0%
	AAAGTAATGCAGTGAGAGAA+GGG	+	chr1_4:65910665-65910684	None:intergenic	35.0%
	AAAAGTAATGCAGTGAGAGA+AGG	+	chr1_4:65910666-65910685	None:intergenic	35.0%
!	TAAAAGGAGAAAGAGTGCAA+GGG	+	chr1_4:65910719-65910738	None:intergenic	35.0%
!	TTAAAAGGAGAAAGAGTGCA+AGG	+	chr1_4:65910720-65910739	None:intergenic	35.0%
!	CAAACAAAACAAAGGCACAT+GGG	+	chr1_4:65910765-65910784	None:intergenic	35.0%
	CTCGAAAGCAAACAAAACAA+AGG	+	chr1_4:65910773-65910792	None:intergenic	35.0%
	TGCAAGGAAAAGAATAAGGT+AGG	+	chr1_4:65910978-65910997	None:intergenic	35.0%
	CTTTAAGCTCCTTAAAATCC+AGG	-	chr1_4:65911036-65911055	Msa0178560:CDS	35.0%
!!!	AAAGAGGTACCTGGATTTTA+AGG	+	chr1_4:65911048-65911067	None:intergenic	35.0%
!!	ATTTTAACAAGGGGAGAAAG+AGG	+	chr1_4:65911064-65911083	None:intergenic	35.0%
	AAATAATAGAAGGGAGAAGG+GGG	+	chr1_4:65911135-65911154	None:intergenic	35.0%
	AAAGTGAACATTCACTGTGA+TGG	-	chr1_4:65911249-65911268	Msa0178560:CDS	35.0%
	AAACTCCTTCAGAGAATTGA+AGG	-	chr1_4:65911291-65911310	Msa0178560:CDS	35.0%
!!	AACTGTTTTGTTGCAACAAG+TGG	-	chr1_4:65911575-65911594	Msa0178560:CDS	35.0%
	TGGAAAGCTTAGGCTATAAA+AGG	-	chr1_4:65911629-65911648	Msa0178560:CDS	35.0%
	GTTCTGCATCTATTTGAACT+TGG	+	chr1_4:65911834-65911853	None:intergenic	35.0%
	TAAAGGACAAAAACAAGGAC+TGG	-	chr1_4:65912008-65912027	Msa0178560:intron	35.0%
!!	AAAAACAAGGACTGGTCAAA+GGG	-	chr1_4:65912016-65912035	Msa0178560:intron	35.0%
	GATGCAAACAATGTGAAGAA+AGG	-	chr1_4:65912195-65912214	Msa0178560:intron	35.0%
	ATAGCTAAGATGAACAATGC+TGG	-	chr1_4:65912222-65912241	Msa0178560:intron	35.0%
	AATGGAAATAGTGGCAAGAA+AGG	-	chr1_4:65912246-65912265	Msa0178560:intron	35.0%
!!	TTATGAAGGAAGGTGCTAAT+GGG	-	chr1_4:65912289-65912308	Msa0178560:intron	35.0%
	TGGGATTGATCAGAAAACAA+TGG	-	chr1_4:65912308-65912327	Msa0178560:intron	35.0%
!	CAATACTCAATTGGCTCAAT+TGG	-	chr1_4:65912347-65912366	Msa0178560:CDS	35.0%
	TGCATGTTCATCAATGAAGA+TGG	+	chr1_4:65912618-65912637	None:intergenic	35.0%
	ATCTTCATTGATGAACATGC+AGG	-	chr1_4:65912617-65912636	Msa0178560:exon	35.0%
	TAATAATAGCCAGTGTTAGG+AGG	+	chr1_4:65912699-65912718	None:intergenic	35.0%
!	TTTGCATAGGAGTAATTTGC+AGG	+	chr1_4:65912741-65912760	None:intergenic	35.0%
	TGGATAACAAGCATTTGCAT+AGG	+	chr1_4:65912754-65912773	None:intergenic	35.0%
!!	TGCAAATGCTTGTTATCCAA+CGG	-	chr1_4:65912755-65912774	Msa0178560:five_prime_UTR	35.0%
	TTACATTATTGAACAGCTGC+TGG	+	chr1_4:65912823-65912842	None:intergenic	35.0%
	GTAGTTTGACTGTAATTTGG+TGG	-	chr1_4:65912931-65912950	Msa0178560:five_prime_UTR	35.0%
!	GCAAACAAAACAAAGGCACA+TGG	+	chr1_4:65910766-65910785	None:intergenic	40.0%
	GGTAGGTTAAGCTAAGCAAA+TGG	+	chr1_4:65910961-65910980	None:intergenic	40.0%
	AATAATAGAAGGGAGAAGGG+GGG	+	chr1_4:65911134-65911153	None:intergenic	40.0%
	AGTGACCTTCAATTCTCTGA+AGG	+	chr1_4:65911299-65911318	None:intergenic	40.0%
	AATAGATGCAGAACAGCAGA+AGG	-	chr1_4:65911840-65911859	Msa0178560:intron	40.0%
!!	CAAAAACAAGGACTGGTCAA+AGG	-	chr1_4:65912015-65912034	Msa0178560:intron	40.0%
	TGAATATGATGAGGAAGAGG+AGG	-	chr1_4:65912104-65912123	Msa0178560:intron	40.0%
	AAGATGAACAATGCTGGCAA+TGG	-	chr1_4:65912228-65912247	Msa0178560:intron	40.0%
	AATGCTGGCAATGGAAATAG+TGG	-	chr1_4:65912237-65912256	Msa0178560:intron	40.0%
	AGGAAACCCAAATCAGAACA+TGG	-	chr1_4:65912266-65912285	Msa0178560:intron	40.0%
	CAGAACATGGTTATGAAGGA+AGG	-	chr1_4:65912279-65912298	Msa0178560:intron	40.0%
!!	GTTATGAAGGAAGGTGCTAA+TGG	-	chr1_4:65912288-65912307	Msa0178560:intron	40.0%
!	ACTCAATTGGCTCAATTGGT+TGG	-	chr1_4:65912351-65912370	Msa0178560:CDS	40.0%
	GGTAATGAAAGTCTCAACCT+TGG	-	chr1_4:65912372-65912391	Msa0178560:CDS	40.0%
	TCAACCTTGGAGAATCCAAA+AGG	-	chr1_4:65912385-65912404	Msa0178560:CDS	40.0%
	CAACCTTGGAGAATCCAAAA+GGG	-	chr1_4:65912386-65912405	Msa0178560:CDS	40.0%
!	GGTGCTATGATGAATTTAGC+TGG	-	chr1_4:65912420-65912439	Msa0178560:intron	40.0%
!	GTTCTAGGTGGAAATTCCAA+TGG	-	chr1_4:65912483-65912502	Msa0178560:intron	40.0%
	GGTGGAAATTCCAATGGTTT+AGG	-	chr1_4:65912489-65912508	Msa0178560:intron	40.0%
	GGAAATTCCAATGGTTTAGG+AGG	-	chr1_4:65912492-65912511	Msa0178560:intron	40.0%
	AGGAAAACCTCCTAAACCAT+TGG	+	chr1_4:65912502-65912521	None:intergenic	40.0%
	TCCACTGCATCTATTCCAAA+TGG	-	chr1_4:65912528-65912547	Msa0178560:intron	40.0%
!	ACCATTTGGAATAGATGCAG+TGG	+	chr1_4:65912532-65912551	None:intergenic	40.0%
	ACTGCATCTATTCCAAATGG+TGG	-	chr1_4:65912531-65912550	Msa0178560:intron	40.0%
	CCAGTAACAAAACCACCATT+TGG	+	chr1_4:65912546-65912565	None:intergenic	40.0%
!!!	CCAAATGGTGGTTTTGTTAC+TGG	-	chr1_4:65912543-65912562	Msa0178560:intron	40.0%
!!	AAATGCTTGTTATCCAACGG+AGG	-	chr1_4:65912758-65912777	Msa0178560:five_prime_UTR	40.0%
	ACAGGTTTGTGTTAGGATGT+TGG	-	chr1_4:65912955-65912974	Msa0178560:five_prime_UTR	40.0%
!	GCAAACAAAACAAAGGCACA+TGG	+	chr1_4:65910766-65910785	None:intergenic	40.0%
	GGTAGGTTAAGCTAAGCAAA+TGG	+	chr1_4:65910961-65910980	None:intergenic	40.0%
	AATAATAGAAGGGAGAAGGG+GGG	+	chr1_4:65911134-65911153	None:intergenic	40.0%
	AGTGACCTTCAATTCTCTGA+AGG	+	chr1_4:65911299-65911318	None:intergenic	40.0%
	AATAGATGCAGAACAGCAGA+AGG	-	chr1_4:65911840-65911859	Msa0178560:intron	40.0%
!!	CAAAAACAAGGACTGGTCAA+AGG	-	chr1_4:65912015-65912034	Msa0178560:intron	40.0%
	TGAATATGATGAGGAAGAGG+AGG	-	chr1_4:65912104-65912123	Msa0178560:intron	40.0%
	AAGATGAACAATGCTGGCAA+TGG	-	chr1_4:65912228-65912247	Msa0178560:intron	40.0%
	AATGCTGGCAATGGAAATAG+TGG	-	chr1_4:65912237-65912256	Msa0178560:intron	40.0%
	AGGAAACCCAAATCAGAACA+TGG	-	chr1_4:65912266-65912285	Msa0178560:intron	40.0%
	CAGAACATGGTTATGAAGGA+AGG	-	chr1_4:65912279-65912298	Msa0178560:intron	40.0%
!!	GTTATGAAGGAAGGTGCTAA+TGG	-	chr1_4:65912288-65912307	Msa0178560:intron	40.0%
!	ACTCAATTGGCTCAATTGGT+TGG	-	chr1_4:65912351-65912370	Msa0178560:CDS	40.0%
	GGTAATGAAAGTCTCAACCT+TGG	-	chr1_4:65912372-65912391	Msa0178560:CDS	40.0%
	TCAACCTTGGAGAATCCAAA+AGG	-	chr1_4:65912385-65912404	Msa0178560:CDS	40.0%
	CAACCTTGGAGAATCCAAAA+GGG	-	chr1_4:65912386-65912405	Msa0178560:CDS	40.0%
!	GGTGCTATGATGAATTTAGC+TGG	-	chr1_4:65912420-65912439	Msa0178560:intron	40.0%
!	GTTCTAGGTGGAAATTCCAA+TGG	-	chr1_4:65912483-65912502	Msa0178560:intron	40.0%
	GGTGGAAATTCCAATGGTTT+AGG	-	chr1_4:65912489-65912508	Msa0178560:intron	40.0%
	GGAAATTCCAATGGTTTAGG+AGG	-	chr1_4:65912492-65912511	Msa0178560:intron	40.0%
	AGGAAAACCTCCTAAACCAT+TGG	+	chr1_4:65912502-65912521	None:intergenic	40.0%
	TCCACTGCATCTATTCCAAA+TGG	-	chr1_4:65912528-65912547	Msa0178560:intron	40.0%
!	ACCATTTGGAATAGATGCAG+TGG	+	chr1_4:65912532-65912551	None:intergenic	40.0%
	ACTGCATCTATTCCAAATGG+TGG	-	chr1_4:65912531-65912550	Msa0178560:intron	40.0%
	CCAGTAACAAAACCACCATT+TGG	+	chr1_4:65912546-65912565	None:intergenic	40.0%
!!!	CCAAATGGTGGTTTTGTTAC+TGG	-	chr1_4:65912543-65912562	Msa0178560:intron	40.0%
!!	AAATGCTTGTTATCCAACGG+AGG	-	chr1_4:65912758-65912777	Msa0178560:five_prime_UTR	40.0%
	ACAGGTTTGTGTTAGGATGT+TGG	-	chr1_4:65912955-65912974	Msa0178560:five_prime_UTR	40.0%
	TGAATGAGAGAGAGAGAGAG+AGG	+	chr1_4:65910611-65910630	None:intergenic	45.0%
	GTGAGAGAAGGGAAGAGTAA+TGG	+	chr1_4:65910654-65910673	None:intergenic	45.0%
	AGAGTGCAAGGGAAGTGAAA+AGG	+	chr1_4:65910708-65910727	None:intergenic	45.0%
	CTGCTGCTATTACTAGCTAG+TGG	+	chr1_4:65910850-65910869	None:intergenic	45.0%
	CAGCAGAAGGTAACAGTTTC+AGG	-	chr1_4:65911853-65911872	Msa0178560:intron	45.0%
	CTGGAAAATATGCTGAGCTC+TGG	-	chr1_4:65911917-65911936	Msa0178560:intron	45.0%
	TCCTCTTCGGAACTAAAAGC+CGG	+	chr1_4:65912072-65912091	None:intergenic	45.0%
	ATATGATGAGGAAGAGGAGG+AGG	-	chr1_4:65912107-65912126	Msa0178560:intron	45.0%
	ATGAAGAGATGCGGTTCATC+AGG	-	chr1_4:65912133-65912152	Msa0178560:intron	45.0%
	TGAAGAGATGCGGTTCATCA+GGG	-	chr1_4:65912134-65912153	Msa0178560:intron	45.0%
	GGGAACAATAACAATGGTGC+TGG	-	chr1_4:65912450-65912469	Msa0178560:intron	45.0%
	AGCCTCAGATGATGTATCAC+AGG	-	chr1_4:65912661-65912680	Msa0178560:intron	45.0%
	GACCTGTGATACATCATCTG+AGG	+	chr1_4:65912666-65912685	None:intergenic	45.0%
	CCAGTGTTAGGAGGAACAAA+AGG	+	chr1_4:65912690-65912709	None:intergenic	45.0%
!	CCTTTTGTTCCTCCTAACAC+TGG	-	chr1_4:65912687-65912706	Msa0178560:intron	45.0%
!	TGACTGTAATTTGGTGGGAC+AGG	-	chr1_4:65912937-65912956	Msa0178560:five_prime_UTR	45.0%
	TGAATGAGAGAGAGAGAGAG+AGG	+	chr1_4:65910611-65910630	None:intergenic	45.0%
	GTGAGAGAAGGGAAGAGTAA+TGG	+	chr1_4:65910654-65910673	None:intergenic	45.0%
	AGAGTGCAAGGGAAGTGAAA+AGG	+	chr1_4:65910708-65910727	None:intergenic	45.0%
	CTGCTGCTATTACTAGCTAG+TGG	+	chr1_4:65910850-65910869	None:intergenic	45.0%
	CAGCAGAAGGTAACAGTTTC+AGG	-	chr1_4:65911853-65911872	Msa0178560:intron	45.0%
	CTGGAAAATATGCTGAGCTC+TGG	-	chr1_4:65911917-65911936	Msa0178560:intron	45.0%
	TCCTCTTCGGAACTAAAAGC+CGG	+	chr1_4:65912072-65912091	None:intergenic	45.0%
	ATATGATGAGGAAGAGGAGG+AGG	-	chr1_4:65912107-65912126	Msa0178560:intron	45.0%
	ATGAAGAGATGCGGTTCATC+AGG	-	chr1_4:65912133-65912152	Msa0178560:intron	45.0%
	TGAAGAGATGCGGTTCATCA+GGG	-	chr1_4:65912134-65912153	Msa0178560:intron	45.0%
	GGGAACAATAACAATGGTGC+TGG	-	chr1_4:65912450-65912469	Msa0178560:intron	45.0%
	AGCCTCAGATGATGTATCAC+AGG	-	chr1_4:65912661-65912680	Msa0178560:intron	45.0%
	GACCTGTGATACATCATCTG+AGG	+	chr1_4:65912666-65912685	None:intergenic	45.0%
	CCAGTGTTAGGAGGAACAAA+AGG	+	chr1_4:65912690-65912709	None:intergenic	45.0%
!	CCTTTTGTTCCTCCTAACAC+TGG	-	chr1_4:65912687-65912706	Msa0178560:intron	45.0%
!	TGACTGTAATTTGGTGGGAC+AGG	-	chr1_4:65912937-65912956	Msa0178560:five_prime_UTR	45.0%
!!!	AAAGATATTTTTAAAAAAAA+AGG	+	chr1_4:65911675-65911694	None:intergenic	5.0%
!!!	AAAGATATTTTTAAAAAAAA+AGG	+	chr1_4:65911675-65911694	None:intergenic	5.0%
!!!	TCCGGCTTTTAGTTCCGAAG+AGG	-	chr1_4:65912068-65912087	Msa0178560:intron	50.0%
	AGGAGGAGGATGAAGAGATG+CGG	-	chr1_4:65912124-65912143	Msa0178560:intron	50.0%
!	TCGCCCTTTTGGATTCTCCA+AGG	+	chr1_4:65912392-65912411	None:intergenic	50.0%
	TCCAAAAGGGCGAGTGACAT+TGG	-	chr1_4:65912399-65912418	Msa0178560:intron	50.0%
!	ACCAATGTCACTCGCCCTTT+TGG	+	chr1_4:65912403-65912422	None:intergenic	50.0%
!	GCTGGTAGTGCTACTGTTCT+AGG	-	chr1_4:65912468-65912487	Msa0178560:intron	50.0%
!	GGTAGTGCTACTGTTCTAGG+TGG	-	chr1_4:65912471-65912490	Msa0178560:intron	50.0%
!	GGTTTAGGAGGTTTTCCTGC+AGG	-	chr1_4:65912504-65912523	Msa0178560:intron	50.0%
	ATAGATGCAGTGGATCCTGC+AGG	+	chr1_4:65912522-65912541	None:intergenic	50.0%
	TGGTGGGACAGGTTTGTGTT+AGG	-	chr1_4:65912948-65912967	Msa0178560:five_prime_UTR	50.0%
!!!	TCCGGCTTTTAGTTCCGAAG+AGG	-	chr1_4:65912068-65912087	Msa0178560:intron	50.0%
	AGGAGGAGGATGAAGAGATG+CGG	-	chr1_4:65912124-65912143	Msa0178560:intron	50.0%
!	TCGCCCTTTTGGATTCTCCA+AGG	+	chr1_4:65912392-65912411	None:intergenic	50.0%
	TCCAAAAGGGCGAGTGACAT+TGG	-	chr1_4:65912399-65912418	Msa0178560:intron	50.0%
!	ACCAATGTCACTCGCCCTTT+TGG	+	chr1_4:65912403-65912422	None:intergenic	50.0%
!	GCTGGTAGTGCTACTGTTCT+AGG	-	chr1_4:65912468-65912487	Msa0178560:intron	50.0%
!	GGTAGTGCTACTGTTCTAGG+TGG	-	chr1_4:65912471-65912490	Msa0178560:intron	50.0%
!	GGTTTAGGAGGTTTTCCTGC+AGG	-	chr1_4:65912504-65912523	Msa0178560:intron	50.0%
	ATAGATGCAGTGGATCCTGC+AGG	+	chr1_4:65912522-65912541	None:intergenic	50.0%
	TGGTGGGACAGGTTTGTGTT+AGG	-	chr1_4:65912948-65912967	Msa0178560:five_prime_UTR	50.0%
!!	CAAGGGGAGAAAGAGGTACC+TGG	+	chr1_4:65911057-65911076	None:intergenic	55.0%
	TGATGAGGAAGAGGAGGAGG+AGG	-	chr1_4:65912110-65912129	Msa0178560:intron	55.0%
!!	CAAGGGGAGAAAGAGGTACC+TGG	+	chr1_4:65911057-65911076	None:intergenic	55.0%
	TGATGAGGAAGAGGAGGAGG+AGG	-	chr1_4:65912110-65912129	Msa0178560:intron	55.0%
	GCTGCAGAGTGATCCTCCGT+TGG	+	chr1_4:65912774-65912793	None:intergenic	60.0%
	GCTGCAGAGTGATCCTCCGT+TGG	+	chr1_4:65912774-65912793	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	65910608	65913043	65910608	ID=Msa0178560;Name=Msa0178560
chr1_4	mRNA	65910608	65913043	65910608	ID=Msa0178560-mRNA-1;Parent=Msa0178560;Name=Msa0178560-mRNA-1;_AED=0.01;_eAED=0.01;_QI=324\|1\|1\|1\|0.66\|0.5\|4\|201\|377
chr1_4	exon	65910608	65911827	65910608	ID=Msa0178560-mRNA-1:exon:21502;Parent=Msa0178560-mRNA-1
chr1_4	exon	65912339	65912414	65912339	ID=Msa0178560-mRNA-1:exon:21501;Parent=Msa0178560-mRNA-1
chr1_4	exon	65912594	65912648	65912594	ID=Msa0178560-mRNA-1:exon:21500;Parent=Msa0178560-mRNA-1
chr1_4	exon	65912736	65913043	65912736	ID=Msa0178560-mRNA-1:exon:21499;Parent=Msa0178560-mRNA-1
chr1_4	five_prime_UTR	65912736	65913043	65912736	ID=Msa0178560-mRNA-1:five_prime_utr;Parent=Msa0178560-mRNA-1
chr1_4	five_prime_UTR	65912633	65912648	65912633	ID=Msa0178560-mRNA-1:five_prime_utr;Parent=Msa0178560-mRNA-1
chr1_4	CDS	65912594	65912632	65912594	ID=Msa0178560-mRNA-1:cds;Parent=Msa0178560-mRNA-1
chr1_4	CDS	65912339	65912414	65912339	ID=Msa0178560-mRNA-1:cds;Parent=Msa0178560-mRNA-1
chr1_4	CDS	65910809	65911827	65910809	ID=Msa0178560-mRNA-1:cds;Parent=Msa0178560-mRNA-1
chr1_4	three_prime_UTR	65910608	65910808	65910608	ID=Msa0178560-mRNA-1:three_prime_utr;Parent=Msa0178560-mRNA-1

Gene Sequence

>Msa0178560

ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTTTGTTCTCAAAGTGAACATTCACTGTGATGGTTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCAGAACAGCAGAAGGTAACAGTTTCAGGTAGTGTCGATGCTGCAACTTTGATCAAGAAACTAGTAAGATCTGGAAAATATGCTGAGCTCTGGTCTCAGAAAACCAACAACAATCAGAATCAAAAGCAGAAGAACAACAACAATGTCAAAGATGACAAGAATAAAGGACAAAAACAAGGACTGGTCAAAGGGCTTGAAGTCTTCAAAAATCAGCAGAAATTTCCGGCTTTTAGTTCCGAAGAGGATGATGAATATTATGAATATGATGAGGAAGAGGAGGAGGAGGATGAAGAGATGCGGTTCATCAGGGAGAAAGCCAATCATTTTCAGATGCTAAAGCAAGCAACAGATGCAAACAATGTGAAGAAAGGTATTATAGCTAAGATGAACAATGCTGGCAATGGAAATAGTGGCAAGAAAGGAAACCCAAATCAGAACATGGTTATGAAGGAAGGTGCTAATGGGATTGATCAGAAAACAATGGCAGCTATGAAGTTGAACAATACTCAATTGGCTCAATTGGTTGGTAATGAAAGTCTCAACCTTGGAGAATCCAAAAGGGCGAGTGACATTGGTGCTATGATGAATTTAGCTGGTTTTAATGGGAACAATAACAATGGTGCTGGTAGTGCTACTGTTCTAGGTGGAAATTCCAATGGTTTAGGAGGTTTTCCTGCAGGATCCACTGCATCTATTCCAAATGGTGGTTTTGTTACTGGCCAATATCCACCATCTATGTTAATGAACATGAATGGTTTCAATAATCATCCATCTTCATTGATGAACATGCAGGCAAGACATGCTATGCAGCAACAGCCTCAGATGATGTATCACAGGTCACCTTTTGTTCCTCCTAACACTGGCTATTATTACAATTATAATAACTACATTCCTGCAAATTACTCCTATGCAAATGCTTGTTATCCAACGGAGGATCACTCTGCAGCGCACATGTTCAGTGATGACAATACTACCAGCAGCTGTTCAATAATGTAA

Protein sequence

>Msa0178560

MTKEEDFKLLKIQTFVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDAATLIKKLVRSGKYAELWSQKTNNNQNQKQKNNNNVKDDKNKGQKQGLVKGLEVFKNQQKFPAFSSEEDDEYYEYDEEEEEEDEEMRFIREKANHFQMLKQATDANNVKKGIIAKMNNAGNGNSGKKGNPNQNMVMKEGANGIDQKTMAAMKLNNTQLAQLVGNESLNLGESKRASDIGAMMNLAGFNGNNNNGAGSATVLGGNSNGLGGFPAGSTASIPNGGFVTGQYPPSMLMNMNGFNNHPSSLMNMQARHAMQQQPQMMYHRSPFVPPNTGYYYNYNNYIPANYSYANACYPTEDHSAAHMFSDDNTTSSCSIM*