AlfalfaGEDB | Msa1354250

M. sativa cultivar zhongmu-4 / Msa1354250

KEGG: K04124
GO: GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009987 GO:0010033 GO:0010114 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016491 GO:0016705 GO:0016706 GO:0016707 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701
PFAM: PF14226.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1354250	XP_003588693.1	96.936	359	11	0	1	359	1	359	0.0	730

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1354250	sp\|O24648\|G3OX_PEA	48.451	355	170	4	4	351	3	351	4.59e-116	344

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1354250	G7I6B9	96.936	359	11	0	1	359	1	359	0.0	730

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0007120	Msa1354250	0.996770	5.610782e-232	-8.615850e-47
Msa0025570	Msa1354250	0.805727	1.161134e-49	-8.615850e-47
Msa0055490	Msa1354250	0.999688	0.000000e+00	-8.615850e-47
Msa0060410	Msa1354250	0.832004	1.210690e-55	-8.615850e-47
Msa0062190	Msa1354250	0.804828	1.791017e-49	-8.615850e-47
Msa0073110	Msa1354250	0.818662	1.744183e-52	-8.615850e-47
Msa0106540	Msa1354250	0.804345	2.259079e-49	-8.615850e-47
Msa1354250	Msa1357840	0.821215	4.545551e-53	-8.615850e-47
Msa1354250	Msa1380740	0.803580	3.257854e-49	-8.615850e-47
Msa1354250	Msa1405830	0.805868	1.084252e-49	-8.615850e-47
Msa1354250	Msa1407810	0.803314	3.697562e-49	-8.615850e-47
Msa1354250	Msa1433360	0.801283	9.684825e-49	-8.615850e-47
Msa1354250	Msa1437780	0.801853	7.401499e-49	-8.615850e-47
Msa1354250	Msa1461660	0.812533	4.041465e-51	-8.615850e-47
Msa0615070	Msa1354250	0.814824	1.265286e-51	-8.615850e-47
Msa0647300	Msa1354250	0.800189	1.619559e-48	-8.615850e-47
Msa0686040	Msa1354250	0.800844	1.191302e-48	-8.615850e-47
Msa0686830	Msa1354250	0.803460	3.449369e-49	-8.615850e-47
Msa0719330	Msa1354250	-0.800238	1.582738e-48	-8.615850e-47
Msa0772160	Msa1354250	-0.804476	2.120685e-49	-8.615850e-47
Msa0121320	Msa1354250	0.801295	9.630154e-49	-8.615850e-47
Msa0136180	Msa1354250	-0.806194	9.257705e-50	-8.615850e-47
Msa0137010	Msa1354250	-0.805995	1.019957e-49	-8.615850e-47
Msa0141410	Msa1354250	0.816616	5.045642e-52	-8.615850e-47
Msa0149110	Msa1354250	0.978586	3.886555e-146	-8.615850e-47
Msa0206370	Msa1354250	0.806935	6.458439e-50	-8.615850e-47
Msa0234150	Msa1354250	0.807467	4.982355e-50	-8.615850e-47
Msa1236680	Msa1354250	0.809709	1.655218e-50	-8.615850e-47
Msa1246830	Msa1354250	0.809274	2.051465e-50	-8.615850e-47
Msa1286860	Msa1354250	-0.813735	2.202177e-51	-8.615850e-47
Msa1288070	Msa1354250	0.802031	6.804603e-49	-8.615850e-47
Msa1295210	Msa1354250	-0.813776	2.156369e-51	-8.615850e-47
Msa1342360	Msa1354250	-0.801769	7.699806e-49	-8.615850e-47
Msa0366510	Msa1354250	0.811842	5.719092e-51	-8.615850e-47
Msa0370620	Msa1354250	0.813032	3.142168e-51	-8.615850e-47
Msa0418230	Msa1354250	0.804423	2.175448e-49	-8.615850e-47
Msa0456450	Msa1354250	-0.801694	7.979205e-49	-8.615850e-47
Msa0464310	Msa1354250	0.808874	2.499454e-50	-8.615850e-47
Msa0464620	Msa1354250	0.804081	2.563621e-49	-8.615850e-47
Msa1006030	Msa1354250	0.800142	1.656012e-48	-8.615850e-47
Msa1041910	Msa1354250	0.813314	2.725444e-51	-8.615850e-47
Msa1042300	Msa1354250	0.800633	1.315331e-48	-8.615850e-47
Msa1044050	Msa1354250	-0.800810	1.210328e-48	-8.615850e-47
Msa1061670	Msa1354250	0.820064	8.354871e-53	-8.615850e-47
Msa1063260	Msa1354250	0.801516	8.677443e-49	-8.615850e-47
Msa1076280	Msa1354250	0.804573	2.024637e-49	-8.615850e-47
Msa1100330	Msa1354250	0.803694	3.085104e-49	-8.615850e-47
Msa1106960	Msa1354250	0.818698	1.710979e-52	-8.615850e-47
Msa0245660	Msa1354250	0.805255	1.458420e-49	-8.615850e-47
Msa0279810	Msa1354250	0.800999	1.107116e-48	-8.615850e-47
Msa0287480	Msa1354250	0.807578	4.721027e-50	-8.615850e-47
Msa0356270	Msa1354250	0.801638	8.191978e-49	-8.615850e-47
Msa1167960	Msa1354250	0.810785	9.700051e-51	-8.615850e-47
Msa1192360	Msa1354250	0.807085	6.004342e-50	-8.615850e-47
Msa1203650	Msa1354250	0.800871	1.175911e-48	-8.615850e-47
Msa0510050	Msa1354250	0.800561	1.360317e-48	-8.615850e-47
Msa0560950	Msa1354250	0.808303	3.308712e-50	-8.615850e-47
Msa0567330	Msa1354250	0.804293	2.316180e-49	-8.615850e-47
Msa0567570	Msa1354250	0.806971	6.346582e-50	-8.615850e-47
Msa0591490	Msa1354250	0.809589	1.755919e-50	-8.615850e-47
Msa0880850	Msa1354250	0.808644	2.799386e-50	-8.615850e-47
Msa0890210	Msa1354250	0.807869	4.093642e-50	-8.615850e-47
Msa0896920	Msa1354250	0.811264	7.637325e-51	-8.615850e-47
Msa0898970	Msa1354250	0.803673	3.116023e-49	-8.615850e-47
Msa0941150	Msa1354250	-0.802622	5.141408e-49	-8.615850e-47
Msa0951200	Msa1354250	0.802658	5.054771e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1354250	MtrunA17_Chr1g0148771	96.936	359	11	0	1	359	1	359	0.0	730
Msa1354250	MtrunA17_Chr2g0332191	47.619	357	169	4	4	352	3	349	1.43e-114	337
Msa1354250	MtrunA17_Chr5g0421011	31.054	351	223	10	24	358	4	351	4.35e-48	166
Msa1354250	MtrunA17_Chr8g0375601	33.798	287	179	8	67	346	61	343	8.22e-47	163
Msa1354250	MtrunA17_Chr2g0314381	32.258	310	195	7	63	359	77	384	1.61e-46	162
Msa1354250	MtrunA17_Chr2g0296371	34.902	255	155	6	72	320	68	317	5.85e-46	160
Msa1354250	MtrunA17_Chr2g0314401	31.313	297	189	7	63	346	51	345	4.10e-44	155
Msa1354250	MtrunA17_Chr1g0162361	33.447	293	175	6	63	336	27	318	5.29e-44	155
Msa1354250	MtrunA17_Chr8g0375571	32.441	299	185	7	63	346	45	341	6.66e-44	155
Msa1354250	MtrunA17_Chr8g0375671	32.765	293	187	7	74	359	72	361	3.53e-43	153
Msa1354250	MtrunA17_Chr5g0424201	32.292	288	184	6	63	340	44	330	5.06e-42	149
Msa1354250	MtrunA17_Chr5g0423251	31.597	288	183	7	63	339	47	331	2.60e-41	148
Msa1354250	MtrunA17_Chr7g0242551	29.907	321	202	8	13	318	9	321	2.88e-41	148
Msa1354250	MtrunA17_Chr1g0162191	32.646	291	172	8	63	336	47	330	3.68e-41	147
Msa1354250	MtrunA17_Chr5g0423191	32.632	285	178	7	63	336	47	328	4.43e-41	147
Msa1354250	MtrunA17_Chr2g0319491	33.028	327	188	11	43	355	17	326	4.54e-41	147
Msa1354250	MtrunA17_Chr5g0420941	31.834	289	177	7	63	337	45	327	5.17e-41	147
Msa1354250	MtrunA17_Chr5g0421041	32.281	285	179	7	63	336	45	326	5.68e-41	147
Msa1354250	MtrunA17_Chr2g0314391	30.323	310	201	7	63	359	70	377	6.15e-41	147
Msa1354250	MtrunA17_Chr5g0421091	32.107	299	183	7	63	346	45	338	6.65e-41	147
Msa1354250	MtrunA17_Chr1g0204181	32.323	297	173	8	57	327	46	340	7.66e-41	147
Msa1354250	MtrunA17_Chr3g0130391	32.353	272	165	4	64	318	67	336	1.96e-40	146
Msa1354250	MtrunA17_Chr8g0365241	30.435	299	192	8	63	348	57	352	2.44e-40	145
Msa1354250	MtrunA17_Chr8g0336761	32.026	306	184	10	63	350	60	359	2.76e-40	145
Msa1354250	MtrunA17_Chr5g0423211	30.822	292	178	8	63	337	47	331	3.15e-40	145
Msa1354250	MtrunA17_Chr5g0423201	32.432	296	186	8	63	346	47	340	4.18e-40	145
Msa1354250	MtrunA17_Chr5g0423221	32.404	287	181	7	63	338	71	355	4.82e-40	145
Msa1354250	MtrunA17_Chr5g0412681	30.503	318	180	9	47	337	10	313	5.70e-40	144
Msa1354250	MtrunA17_Chr7g0265221	32.154	311	174	8	30	318	44	339	1.06e-39	144
Msa1354250	MtrunA17_Chr7g0239111	31.086	267	175	6	60	319	52	316	1.30e-39	144
Msa1354250	MtrunA17_Chr5g0420951	30.877	285	184	6	63	336	53	335	1.60e-39	143
Msa1354250	MtrunA17_Chr5g0421101	31.081	296	189	8	63	346	47	339	1.69e-39	143
Msa1354250	MtrunA17_Chr8g0336851	29.193	322	192	11	53	350	50	359	1.81e-39	143
Msa1354250	MtrunA17_Chr6g0474391	33.217	286	165	7	57	318	51	334	3.38e-39	143
Msa1354250	MtrunA17_Chr2g0313111	31.818	264	170	5	61	318	26	285	3.39e-39	142
Msa1354250	MtrunA17_Chr7g0239821	28.374	289	193	7	60	337	61	346	3.56e-39	142
Msa1354250	MtrunA17_Chr8g0336781	29.283	321	194	9	53	350	85	395	5.73e-39	143
Msa1354250	MtrunA17_Chr7g0239101	31.343	268	173	6	60	319	52	316	5.76e-39	142
Msa1354250	MtrunA17_Chr5g0420981	29.431	299	195	8	63	348	53	348	5.82e-39	142
Msa1354250	MtrunA17_Chr8g0375681	32.734	278	177	7	89	359	15	289	7.71e-39	140
Msa1354250	MtrunA17_Chr3g0109041	33.220	295	178	9	61	337	40	333	8.91e-39	141
Msa1354250	MtrunA17_Chr8g0351101	32.353	272	166	5	63	318	54	323	1.11e-38	141
Msa1354250	MtrunA17_Chr5g0412671	30.169	295	180	9	63	337	38	326	1.64e-38	140
Msa1354250	MtrunA17_Chr3g0125201	31.599	269	164	6	62	318	2	262	2.93e-38	139
Msa1354250	MtrunA17_Chr8g0336751	31.429	315	175	11	62	350	93	392	3.52e-38	140
Msa1354250	MtrunA17_Chr3g0114861	31.010	287	188	6	59	336	36	321	4.11e-38	139
Msa1354250	MtrunA17_Chr8g0348081	30.625	320	170	12	63	350	60	359	4.82e-38	139
Msa1354250	MtrunA17_Chr4g0006371	29.795	292	186	7	44	318	40	329	5.36e-38	139
Msa1354250	MtrunA17_Chr5g0420901	30.847	295	191	7	63	346	46	338	5.66e-38	139
Msa1354250	MtrunA17_Chr5g0424211	32.075	265	170	5	63	318	42	305	7.09e-38	138
Msa1354250	MtrunA17_Chr3g0125421	31.673	281	173	5	54	318	29	306	7.70e-38	139
Msa1354250	MtrunA17_Chr5g0412651	31.615	291	165	9	63	329	38	318	8.95e-38	138
Msa1354250	MtrunA17_Chr3g0128001	32.292	288	173	8	63	336	38	317	1.35e-37	137
Msa1354250	MtrunA17_Chr4g0045411	29.316	307	193	5	60	343	27	332	1.72e-37	137
Msa1354250	MtrunA17_Chr5g0398291	29.856	278	180	5	53	316	37	313	1.75e-37	138
Msa1354250	MtrunA17_Chr8g0345831	32.222	270	160	7	63	318	42	302	2.23e-37	137
Msa1354250	MtrunA17_Chr4g0064781	30.769	312	199	7	22	317	5	315	4.33e-37	137
Msa1354250	MtrunA17_Chr7g0239121	31.227	269	173	7	60	319	48	313	5.57e-37	136
Msa1354250	MtrunA17_Chr8g0336631	30.159	315	179	10	63	350	60	360	7.18e-37	136
Msa1354250	MtrunA17_Chr1g0191201	32.000	275	162	5	64	318	54	323	1.35e-36	136
Msa1354250	MtrunA17_Chr2g0285931	30.597	268	171	5	63	318	28	292	2.45e-36	134
Msa1354250	MtrunA17_Chr4g0066121	31.169	308	176	10	63	345	60	356	4.36e-36	134
Msa1354250	MtrunA17_Chr6g0455481	30.282	284	185	6	63	336	42	322	4.90e-36	134
Msa1354250	MtrunA17_Chr3g0102041	33.469	245	160	3	76	318	60	303	5.56e-36	134
Msa1354250	MtrunA17_Chr1g0179801	31.861	317	190	9	63	356	66	379	8.66e-36	134
Msa1354250	MtrunA17_Chr1g0184161	26.506	332	204	8	24	336	9	319	1.66e-35	132
Msa1354250	MtrunA17_Chr5g0426891	31.786	280	168	8	73	340	58	326	1.90e-35	132
Msa1354250	MtrunA17_Chr3g0087031	26.543	324	217	8	4	318	9	320	1.98e-35	132
Msa1354250	MtrunA17_Chr3g0126741	28.969	359	224	11	2	343	4	348	2.57e-35	132
Msa1354250	MtrunA17_Chr8g0336861	27.019	322	201	9	53	350	50	361	5.38e-35	131
Msa1354250	MtrunA17_Chr4g0045451	30.314	287	170	8	59	318	22	305	1.19e-34	130
Msa1354250	MtrunA17_Chr8g0375701	30.719	306	186	10	62	350	54	350	1.72e-34	130
Msa1354250	MtrunA17_Chr2g0311831	30.312	320	170	12	63	350	68	366	1.92e-34	130
Msa1354250	MtrunA17_Chr2g0311761	30.530	321	169	13	63	350	68	367	3.77e-34	129
Msa1354250	MtrunA17_Chr8g0371921	31.273	275	179	5	52	318	31	303	4.34e-34	129
Msa1354250	MtrunA17_Chr7g0250511	27.063	303	197	8	51	337	38	332	4.69e-34	128
Msa1354250	MtrunA17_Chr3g0113641	30.769	286	179	8	48	318	35	316	4.92e-34	129
Msa1354250	MtrunA17_Chr1g0184101	28.231	294	181	7	63	337	38	320	7.78e-34	127
Msa1354250	MtrunA17_Chr4g0045441	29.348	276	174	7	72	329	47	319	8.78e-34	128
Msa1354250	MtrunA17_Chr4g0045431	29.412	272	175	6	74	329	49	319	1.01e-33	127
Msa1354250	MtrunA17_Chr3g0093761	29.210	291	190	8	56	336	49	333	1.15e-33	127
Msa1354250	MtrunA17_Chr8g0371931	33.086	269	163	6	63	318	39	303	1.51e-33	127
Msa1354250	MtrunA17_Chr1g0184111	25.602	332	208	8	25	337	9	320	1.80e-33	127
Msa1354250	MtrunA17_Chr3g0093751	28.866	291	192	7	56	336	49	334	4.20e-33	126
Msa1354250	MtrunA17_Chr2g0311921	27.564	312	189	11	51	338	42	340	5.11e-33	126
Msa1354250	MtrunA17_Chr7g0247741	30.169	295	192	7	63	346	11	302	7.94e-33	124
Msa1354250	MtrunA17_Chr3g0145171	30.996	271	168	7	63	316	52	320	1.00e-32	125
Msa1354250	MtrunA17_Chr3g0121141	29.352	293	183	9	64	342	5	287	1.02e-32	124
Msa1354250	MtrunA17_Chr2g0311631	28.713	303	190	8	55	337	46	342	1.61e-32	124
Msa1354250	MtrunA17_Chr7g0239071	31.667	240	158	5	83	319	25	261	1.69e-32	123
Msa1354250	MtrunA17_Chr4g0045471	29.225	284	172	7	63	319	26	307	2.06e-32	124
Msa1354250	MtrunA17_Chr1g0184151	27.304	293	183	7	63	336	38	319	2.31e-32	124
Msa1354250	MtrunA17_Chr3g0093741	29.553	291	190	7	56	336	49	334	2.49e-32	124
Msa1354250	MtrunA17_Chr5g0405411	32.669	251	156	4	75	318	59	303	3.07e-32	124
Msa1354250	MtrunA17_Chr4g0055591	30.154	325	175	12	56	350	54	356	3.19e-32	124
Msa1354250	MtrunA17_Chr7g0220011	29.066	289	193	6	60	339	36	321	3.71e-32	123
Msa1354250	MtrunA17_Chr5g0437181	30.258	271	170	8	63	318	49	315	4.37e-32	123
Msa1354250	MtrunA17_Chr1g0184121	25.301	332	209	8	25	337	9	320	6.80e-32	122
Msa1354250	MtrunA17_Chr7g0220001	29.588	267	169	8	63	318	41	299	7.11e-32	122
Msa1354250	MtrunA17_Chr1g0162321	26.935	323	189	9	59	343	65	378	1.81e-31	122
Msa1354250	MtrunA17_Chr1g0162351	26.935	323	189	9	59	343	65	378	1.96e-31	122
Msa1354250	MtrunA17_Chr7g0232161	31.579	247	156	8	63	301	60	301	3.48e-31	120
Msa1354250	MtrunA17_Chr5g0439011	29.167	264	171	6	64	318	6	262	3.57e-31	120
Msa1354250	MtrunA17_Chr8g0370711	31.293	294	177	9	63	339	52	337	4.30e-31	120
Msa1354250	MtrunA17_Chr8g0348951	27.759	299	205	6	63	351	10	307	5.36e-31	119
Msa1354250	MtrunA17_Chr2g0289341	28.947	266	169	8	64	318	5	261	1.08e-30	119
Msa1354250	MtrunA17_Chr2g0314371	30.855	269	151	7	63	300	52	316	1.63e-30	119
Msa1354250	MtrunA17_Chr1g0187821	29.391	279	164	8	55	313	56	321	1.77e-30	119
Msa1354250	MtrunA17_Chr8g0358941	27.835	291	189	7	63	336	27	313	2.73e-30	118
Msa1354250	MtrunA17_Chr1g0187811	27.937	315	188	10	62	350	187	488	2.86e-30	120
Msa1354250	MtrunA17_Chr8g0384461	31.727	249	150	6	80	316	73	313	4.38e-30	118
Msa1354250	MtrunA17_Chr1g0194321	31.786	280	160	8	63	318	20	292	4.68e-30	117
Msa1354250	MtrunA17_Chr8g0370721	29.268	287	186	8	63	336	52	334	4.88e-30	117
Msa1354250	MtrunA17_Chr8g0384481	30.078	256	165	6	72	318	76	326	5.11e-30	118
Msa1354250	MtrunA17_Chr6g0488511	29.818	275	161	10	62	318	2	262	1.69e-29	115
Msa1354250	MtrunA17_Chr7g0239091	28.462	260	169	6	60	313	157	405	2.06e-29	117
Msa1354250	MtrunA17_Chr8g0354261	29.457	258	164	6	63	308	68	319	3.01e-29	116
Msa1354250	MtrunA17_Chr1g0187831	28.395	324	189	11	56	350	60	369	3.57e-29	116
Msa1354250	MtrunA17_Chr2g0311701	27.914	326	191	11	63	359	69	379	1.36e-28	114
Msa1354250	MtrunA17_Chr2g0311861	30.492	305	169	15	63	350	64	342	1.86e-28	113
Msa1354250	MtrunA17_Chr7g0225881	30.000	300	172	13	63	338	67	352	2.56e-28	113
Msa1354250	MtrunA17_Chr7g0265351	27.305	282	194	5	63	336	39	317	3.46e-28	112
Msa1354250	MtrunA17_Chr3g0145181	27.891	294	185	10	61	336	50	334	3.53e-28	112
Msa1354250	MtrunA17_Chr2g0311711	28.391	317	185	11	63	353	67	367	6.06e-28	112
Msa1354250	MtrunA17_Chr1g0167911	30.116	259	164	8	61	309	52	303	7.95e-28	112
Msa1354250	MtrunA17_Chr8g0354241	29.070	258	165	6	63	308	68	319	9.49e-28	112
Msa1354250	MtrunA17_Chr8g0364471	28.996	269	172	8	53	309	56	317	1.71e-27	111
Msa1354250	MtrunA17_Chr4g0053251	31.379	290	165	9	59	318	4	289	2.10e-27	110
Msa1354250	MtrunA17_Chr3g0145201	27.682	289	192	9	61	336	685	969	3.75e-27	113
Msa1354250	MtrunA17_Chr4g0068891	29.066	289	183	9	63	336	20	301	1.31e-26	107
Msa1354250	MtrunA17_Chr3g0092531	26.715	277	189	5	73	343	26	294	2.11e-26	107
Msa1354250	MtrunA17_Chr5g0394071	32.787	183	117	3	170	350	2	180	2.44e-26	103
Msa1354250	MtrunA17_Chr7g0235951	26.875	320	184	12	63	350	67	368	3.40e-26	107
Msa1354250	MtrunA17_Chr4g0050031	26.129	310	209	6	24	318	20	324	4.17e-26	107
Msa1354250	MtrunA17_Chr5g0420721	30.172	232	155	5	110	336	1	230	4.21e-26	105
Msa1354250	MtrunA17_Chr4g0045461	27.000	300	162	8	59	318	22	304	4.55e-26	107
Msa1354250	MtrunA17_Chr2g0311681	26.480	321	184	10	63	350	63	364	5.68e-26	107
Msa1354250	MtrunA17_Chr7g0247991	29.355	310	164	10	63	338	67	355	6.82e-26	107
Msa1354250	MtrunA17_Chr6g0472861	30.502	259	160	10	63	309	70	320	1.22e-25	106
Msa1354250	MtrunA17_Chr1g0167961	29.889	271	154	10	59	309	65	319	1.42e-25	105
Msa1354250	MtrunA17_Chr2g0311741	27.829	327	197	11	45	349	14	323	1.74e-25	104
Msa1354250	MtrunA17_Chr2g0311691	26.791	321	183	9	63	350	63	364	2.53e-25	105
Msa1354250	MtrunA17_Chr3g0114871	28.755	233	158	5	63	288	42	273	2.66e-25	103
Msa1354250	MtrunA17_Chr4g0055871	27.097	310	188	11	63	347	9	305	3.06e-25	103
Msa1354250	MtrunA17_Chr3g0105281	29.368	269	171	8	58	316	29	288	4.39e-25	103
Msa1354250	MtrunA17_Chr8g0335411	28.261	322	195	9	54	350	58	368	6.40e-25	103
Msa1354250	MtrunA17_Chr6g0486831	29.642	307	182	12	61	337	19	321	1.08e-24	102
Msa1354250	MtrunA17_Chr8g0389941	30.255	314	189	12	66	352	37	347	2.18e-24	102
Msa1354250	MtrunA17_Chr7g0236011	29.412	323	172	12	63	350	67	368	3.13e-24	102
Msa1354250	MtrunA17_Chr4g0037611	36.957	138	85	2	214	350	34	170	4.13e-24	97.8
Msa1354250	MtrunA17_Chr4g0004071	25.926	270	185	5	58	316	4	269	4.83e-24	100
Msa1354250	MtrunA17_Chr1g0184241	25.078	319	202	9	55	350	58	362	7.87e-24	100
Msa1354250	MtrunA17_Chr7g0266651	27.508	309	190	9	61	344	57	356	1.10e-23	100
Msa1354250	MtrunA17_Chr4g0011311	30.290	241	145	9	63	291	67	296	1.26e-23	99.4
Msa1354250	MtrunA17_Chr1g0167951	25.857	321	186	11	57	346	47	346	2.88e-23	99.4
Msa1354250	MtrunA17_Chr4g0055911	27.508	309	183	12	63	342	9	305	7.11e-23	97.4
Msa1354250	MtrunA17_Chr5g0407731	29.553	291	180	12	63	341	33	310	7.88e-23	97.8
Msa1354250	MtrunA17_Chr3g0126761	32.955	176	114	3	171	343	45	219	3.02e-22	94.0
Msa1354250	MtrunA17_Chr4g0052251	25.940	266	184	5	63	318	29	291	3.20e-22	95.9
Msa1354250	MtrunA17_Chr5g0420881	36.765	136	80	4	216	346	1	135	6.81e-22	90.9
Msa1354250	MtrunA17_Chr5g0407781	27.961	304	191	13	63	351	5	295	1.04e-21	94.0
Msa1354250	MtrunA17_Chr4g0066991	26.708	322	177	11	58	350	57	348	4.26e-21	93.2
Msa1354250	MtrunA17_Chr7g0233661	33.099	142	94	1	214	355	19	159	5.95e-21	88.6
Msa1354250	MtrunA17_Chr1g0167931	27.799	259	134	8	59	308	50	264	6.71e-21	92.0
Msa1354250	MtrunA17_Chr4g0004061	24.151	265	187	4	63	316	9	270	8.15e-21	91.7
Msa1354250	MtrunA17_Chr7g0256741	26.070	257	175	5	63	307	10	263	1.23e-20	91.3
Msa1354250	MtrunA17_Chr8g0336801	34.932	146	77	4	217	350	12	151	1.29e-20	87.4
Msa1354250	MtrunA17_Chr1g0161041	30.597	268	148	11	63	310	96	345	2.13e-20	91.7
Msa1354250	MtrunA17_Chr7g0235981	26.515	264	168	7	89	337	56	308	2.20e-20	90.5
Msa1354250	MtrunA17_Chr1g0161111	28.947	266	155	10	63	310	132	381	3.18e-20	91.3
Msa1354250	MtrunA17_Chr1g0161081	29.851	268	150	11	63	310	73	322	4.78e-20	90.1
Msa1354250	MtrunA17_Chr8g0362741	29.148	223	139	8	62	280	66	273	1.22e-19	87.8
Msa1354250	MtrunA17_Chr2g0293931	31.818	154	96	4	176	320	13	166	3.55e-17	79.3
Msa1354250	MtrunA17_Chr4g0075471	33.333	123	73	3	197	318	17	131	2.22e-16	75.9
Msa1354250	MtrunA17_Chr2g0319521	36.937	111	62	4	173	280	19	124	5.53e-16	73.9
Msa1354250	MtrunA17_Chr8g0336871	27.778	180	105	6	183	350	3	169	9.78e-16	74.3
Msa1354250	MtrunA17_Chr1g0170631	31.250	176	113	5	173	343	6	178	2.09e-15	73.9
Msa1354250	MtrunA17_Chr3g0138351	23.469	294	204	7	63	337	7	298	2.16e-15	76.3
Msa1354250	MtrunA17_Chr4g0064771	29.143	175	119	4	171	342	27	199	1.20e-14	72.0
Msa1354250	MtrunA17_Chr1g0158011	24.766	214	152	4	146	354	50	259	1.64e-14	72.8
Msa1354250	MtrunA17_Chr4g0009561	24.333	300	205	7	58	337	2	299	3.53e-14	72.4
Msa1354250	MtrunA17_Chr3g0092581	30.579	121	75	3	229	343	49	166	3.62e-14	70.5
Msa1354250	MtrunA17_Chr8g0364171	32.800	125	69	4	165	280	8	126	1.10e-13	67.8
Msa1354250	MtrunA17_Chr4g0009541	23.448	290	207	4	63	337	7	296	1.31e-13	70.9
Msa1354250	MtrunA17_Chr8g0375581	42.254	71	39	2	208	277	17	86	5.83e-13	63.9
Msa1354250	MtrunA17_Chr1g0148781	24.468	282	181	8	75	337	34	302	5.85e-13	68.9
Msa1354250	MtrunA17_Chr8g0336831	26.904	197	129	6	53	238	50	242	1.21e-12	67.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1354250	AT1G15550.1	45.531	358	182	4	1	351	1	352	3.93e-109	323
Msa1354250	AT1G80340.1	43.017	358	184	6	1	351	1	345	2.83e-95	288
Msa1354250	AT4G21690.1	40.833	360	186	6	3	350	2	346	9.27e-93	281
Msa1354250	AT1G80330.1	41.691	343	186	5	23	354	12	351	1.04e-89	274
Msa1354250	AT1G78550.1	33.218	289	179	6	60	336	50	336	3.52e-47	164
Msa1354250	AT1G17020.1	34.106	302	184	7	63	350	53	353	6.32e-47	163
Msa1354250	AT1G17010.1	32.343	303	191	6	61	350	52	353	1.43e-46	162
Msa1354250	AT3G21420.1	35.862	290	168	8	63	336	55	342	1.71e-45	159
Msa1354250	AT2G38240.1	34.672	274	166	7	55	318	40	310	6.09e-44	155
Msa1354250	AT4G10500.1	31.599	269	175	5	57	318	38	304	2.15e-43	154
Msa1354250	AT4G25300.1	32.558	301	189	6	63	350	52	351	4.39e-43	153
Msa1354250	AT4G25310.1	33.569	283	178	6	74	350	70	348	3.91e-42	150
Msa1354250	AT3G19010.1	33.333	285	158	8	63	318	28	309	7.92e-42	149
Msa1354250	AT3G19010.4	33.333	285	158	8	63	318	28	309	7.92e-42	149
Msa1354250	AT4G10490.1	32.841	271	163	7	60	318	39	302	1.03e-41	149
Msa1354250	AT4G25420.1	33.818	275	158	7	63	318	61	330	1.57e-41	149
Msa1354250	AT5G08640.2	31.930	285	183	6	62	336	42	325	1.58e-41	148
Msa1354250	AT5G08640.1	31.930	285	183	6	62	336	42	325	1.58e-41	148
Msa1354250	AT1G78550.2	33.840	263	163	7	79	336	2	258	1.01e-40	145
Msa1354250	AT1G60980.1	31.834	289	172	6	63	328	57	343	1.45e-39	144
Msa1354250	AT4G22880.1	32.130	277	173	6	54	316	38	313	3.10e-38	140
Msa1354250	AT4G22880.2	32.130	277	173	6	54	316	38	313	3.10e-38	140
Msa1354250	AT4G22880.3	32.130	277	173	6	54	316	38	313	3.10e-38	140
Msa1354250	AT5G05600.1	30.034	293	187	7	60	336	59	349	1.00e-37	139
Msa1354250	AT4G21200.1	28.671	286	178	7	63	336	42	313	1.56e-37	138
Msa1354250	AT5G51810.1	31.343	268	170	4	63	318	63	328	1.98e-37	139
Msa1354250	AT3G55970.1	30.357	280	180	5	53	318	42	320	2.56e-37	138
Msa1354250	AT5G07200.1	30.292	274	171	4	63	318	58	329	3.41e-37	138
Msa1354250	AT2G36690.2	31.970	269	163	6	63	318	61	322	1.00e-36	136
Msa1354250	AT2G36690.1	31.970	269	163	6	63	318	61	322	1.00e-36	136
Msa1354250	AT3G11180.2	32.830	265	167	6	63	318	95	357	1.99e-36	136
Msa1354250	AT3G11180.1	32.830	265	167	6	63	318	95	357	2.35e-36	136
Msa1354250	AT3G19010.3	31.228	285	134	8	63	318	28	279	3.32e-36	134
Msa1354250	AT3G51240.1	33.198	247	158	4	76	318	59	302	8.83e-36	134
Msa1354250	AT3G13610.1	28.475	295	189	9	57	337	56	342	1.50e-35	133
Msa1354250	AT1G77330.1	28.283	297	188	7	62	341	2	290	1.51e-35	132
Msa1354250	AT1G49390.1	30.479	292	189	6	63	342	45	334	1.88e-35	132
Msa1354250	AT1G30040.1	30.682	264	172	5	63	318	31	291	2.36e-35	132
Msa1354250	AT1G55290.1	28.475	295	192	9	54	337	56	342	3.36e-35	132
Msa1354250	AT2G34555.1	32.319	263	168	5	63	318	27	286	1.62e-34	130
Msa1354250	AT5G54000.2	29.260	311	201	7	30	329	19	321	3.88e-34	129
Msa1354250	AT5G24530.1	31.034	290	177	9	63	336	38	320	5.39e-34	128
Msa1354250	AT1G78440.1	29.630	270	174	5	61	318	16	281	5.44e-34	128
Msa1354250	AT1G12010.1	30.034	293	180	9	63	341	7	288	1.22e-33	127
Msa1354250	AT2G19590.1	33.212	274	148	10	63	318	11	267	2.43e-33	126
Msa1354250	AT5G59530.1	30.000	310	181	9	63	347	58	356	3.94e-32	124
Msa1354250	AT5G63590.1	28.421	285	192	6	63	336	14	297	6.81e-32	122
Msa1354250	AT1G06650.2	30.650	323	169	13	63	351	64	365	6.87e-32	123
Msa1354250	AT5G20550.1	31.081	296	183	8	63	342	45	335	7.12e-32	123
Msa1354250	AT5G63600.1	28.472	288	193	7	63	342	33	315	9.58e-32	122
Msa1354250	AT1G49390.2	30.859	256	171	5	91	342	2	255	1.53e-31	120
Msa1354250	AT4G16330.2	28.571	287	193	9	59	337	63	345	1.71e-31	122
Msa1354250	AT1G62380.1	27.740	292	188	8	63	341	7	288	2.58e-31	120
Msa1354250	AT3G19000.1	28.736	261	162	7	63	301	32	290	2.67e-31	121
Msa1354250	AT5G20400.1	29.492	295	188	9	63	342	45	334	4.09e-31	121
Msa1354250	AT5G59540.1	29.831	295	183	9	63	339	61	349	6.31e-31	120
Msa1354250	AT5G63600.2	28.374	289	193	8	63	342	33	316	8.15e-31	119
Msa1354250	AT1G06645.1	30.132	302	178	11	67	351	90	375	1.23e-30	120
Msa1354250	AT5G12270.1	28.916	332	204	12	22	337	25	340	1.29e-30	120
Msa1354250	AT1G04380.1	28.165	316	179	10	63	350	45	340	1.33e-30	119
Msa1354250	AT2G44800.1	27.946	297	195	6	61	343	50	341	1.44e-30	119
Msa1354250	AT3G19010.2	31.535	241	140	7	63	281	28	265	1.52e-30	118
Msa1354250	AT1G06640.1	28.302	318	183	11	63	351	64	365	2.77e-30	119
Msa1354250	AT1G44090.1	29.889	271	174	5	63	318	63	332	4.27e-30	119
Msa1354250	AT1G06620.1	29.206	315	182	10	63	351	62	361	4.53e-30	118
Msa1354250	AT5G54000.1	30.579	242	163	4	91	329	2	241	5.30e-30	116
Msa1354250	AT5G43440.1	28.912	294	179	8	63	336	62	345	6.59e-30	118
Msa1354250	AT5G43450.1	30.233	301	168	10	63	338	61	344	6.60e-30	118
Msa1354250	AT4G25420.2	31.646	237	138	7	63	280	61	292	3.31e-29	114
Msa1354250	AT3G61400.1	27.707	314	175	9	63	341	60	356	6.45e-29	115
Msa1354250	AT5G07480.1	27.273	308	198	7	57	343	38	340	1.49e-28	114
Msa1354250	AT3G60290.1	27.244	312	196	8	63	354	52	352	2.07e-28	114
Msa1354250	AT1G05010.1	29.963	267	166	9	64	318	5	262	2.21e-28	113
Msa1354250	AT1G03400.1	31.418	261	146	9	63	308	56	298	2.74e-28	113
Msa1354250	AT1G03410.2	28.859	298	176	11	63	336	57	342	3.30e-28	113
Msa1354250	AT1G03410.1	28.859	298	176	11	63	336	94	379	6.64e-28	113
Msa1354250	AT2G19590.2	33.607	244	133	9	87	318	26	252	7.03e-28	111
Msa1354250	AT5G51810.2	28.755	233	152	4	63	283	63	293	7.68e-28	111
Msa1354250	AT5G51310.1	26.730	318	203	10	63	356	5	316	8.56e-28	111
Msa1354250	AT5G43935.1	28.671	286	172	7	63	337	19	283	1.14e-27	110
Msa1354250	AT4G25300.2	36.066	183	111	4	169	346	72	253	1.17e-27	109
Msa1354250	AT3G12900.1	26.148	283	197	5	63	337	59	337	1.70e-27	111
Msa1354250	AT1G04350.1	28.165	316	175	12	63	347	58	352	1.07e-26	109
Msa1354250	AT3G55970.2	28.512	242	158	5	53	280	42	282	1.37e-26	107
Msa1354250	AT3G19000.2	27.170	265	165	8	47	289	20	278	1.74e-26	107
Msa1354250	AT5G63595.1	28.731	268	147	10	64	317	26	263	2.78e-26	106
Msa1354250	AT3G50210.4	29.592	294	171	9	59	318	4	295	3.01e-26	107
Msa1354250	AT3G50210.1	29.592	294	171	9	59	318	4	295	3.01e-26	107
Msa1354250	AT3G50210.3	29.592	294	171	9	59	318	4	295	3.01e-26	107
Msa1354250	AT3G51240.2	32.258	217	140	4	106	318	5	218	3.31e-26	106
Msa1354250	AT2G30840.1	27.986	293	187	8	62	336	56	342	7.71e-26	107
Msa1354250	AT2G30830.1	29.317	249	149	9	72	308	72	305	1.26e-25	106
Msa1354250	AT4G25310.2	28.369	282	166	6	74	350	70	320	2.54e-25	104
Msa1354250	AT2G25450.1	29.323	266	153	10	63	308	55	305	6.40e-25	104
Msa1354250	AT5G05600.2	28.571	231	150	6	63	280	62	290	8.12e-25	102
Msa1354250	AT1G02400.1	29.167	288	186	10	64	336	25	309	1.26e-24	102
Msa1354250	AT5G58660.1	28.421	285	166	9	63	316	34	311	1.89e-24	102
Msa1354250	AT3G47190.1	26.441	295	177	10	44	315	16	293	1.92e-24	102
Msa1354250	AT3G49630.1	29.021	286	174	7	61	318	7	291	2.53e-24	102
Msa1354250	AT1G50960.1	29.323	266	168	7	60	313	37	294	3.66e-24	101
Msa1354250	AT3G49630.3	28.727	275	174	6	65	318	14	287	8.61e-24	100
Msa1354250	AT1G14130.1	28.159	277	163	8	59	318	5	262	1.43e-23	99.8
Msa1354250	AT4G23340.1	26.452	310	194	11	63	351	10	306	1.52e-23	99.8
Msa1354250	AT1G30040.2	29.204	226	149	5	63	280	31	253	2.28e-23	98.2
Msa1354250	AT3G46500.5	28.435	313	193	11	61	350	18	322	3.77e-23	99.0
Msa1354250	AT1G03400.2	28.374	289	146	10	63	308	56	326	1.06e-22	98.2
Msa1354250	AT5G43440.2	29.646	226	145	6	63	279	62	282	1.24e-22	96.7
Msa1354250	AT3G49620.1	27.622	286	178	7	61	318	32	316	1.87e-22	97.4
Msa1354250	AT3G61400.2	28.631	241	137	6	63	280	60	288	2.12e-22	96.3
Msa1354250	AT1G04380.2	28.814	236	137	7	63	282	45	265	3.02e-22	95.1
Msa1354250	AT2G30840.3	27.645	293	182	9	62	336	56	336	3.70e-22	96.7
Msa1354250	AT1G06620.2	30.508	236	130	8	63	279	62	282	6.29e-22	94.7
Msa1354250	AT5G43450.2	30.736	231	134	8	63	279	61	279	6.29e-22	94.7
Msa1354250	AT5G59540.2	29.565	230	144	7	63	280	61	284	7.06e-22	94.4
Msa1354250	AT1G14120.2	30.627	271	156	9	58	313	3	256	1.19e-21	94.4
Msa1354250	AT1G14120.1	30.627	271	156	9	58	313	3	256	1.19e-21	94.4
Msa1354250	AT1G14120.3	30.627	271	156	9	58	313	3	256	1.19e-21	94.4
Msa1354250	AT1G47990.1	26.449	276	170	7	63	318	15	277	2.00e-21	94.0
Msa1354250	AT1G06650.1	30.041	243	133	9	63	284	64	290	3.41e-21	93.2
Msa1354250	AT3G46490.1	28.571	315	196	11	61	348	15	327	4.36e-21	93.2
Msa1354250	AT5G63580.2	27.876	226	157	4	60	280	16	240	9.26e-21	90.5
Msa1354250	AT5G63580.1	28.378	222	153	4	60	276	16	236	1.72e-20	89.7
Msa1354250	AT3G46500.7	29.818	275	165	10	61	315	18	284	2.58e-20	90.5
Msa1354250	AT1G35190.2	27.389	314	179	12	61	350	13	301	4.20e-20	89.7
Msa1354250	AT1G52820.1	23.396	265	190	3	63	317	12	273	7.94e-20	89.4
Msa1354250	AT1G52800.1	23.755	261	175	4	63	307	10	262	1.33e-19	88.6
Msa1354250	AT4G16330.1	29.775	178	117	5	161	337	69	239	2.32e-19	87.0
Msa1354250	AT1G15540.1	27.715	267	161	9	63	307	9	265	3.55e-19	87.4
Msa1354250	AT1G15540.4	27.715	267	161	9	63	307	9	265	3.55e-19	87.4
Msa1354250	AT1G15540.3	27.715	267	161	9	63	307	16	272	3.93e-19	87.4
Msa1354250	AT1G15540.2	27.715	267	161	9	63	307	12	268	4.09e-19	87.4
Msa1354250	AT1G06640.2	27.731	238	135	8	63	279	64	285	5.15e-19	87.0
Msa1354250	AT5G58660.2	27.823	248	142	8	63	280	34	274	9.87e-19	85.5
Msa1354250	AT1G35190.1	25.697	323	196	12	61	350	13	324	1.19e-18	86.3
Msa1354250	AT1G06640.3	27.119	236	135	8	63	277	64	283	1.62e-18	85.1
Msa1354250	AT5G07480.2	29.319	191	126	4	161	343	42	231	1.77e-18	84.3
Msa1354250	AT1G52790.1	28.216	241	156	6	75	307	27	258	3.83e-18	84.3
Msa1354250	AT1G80320.1	23.792	269	183	5	54	307	2	263	1.31e-17	83.2
Msa1354250	AT3G46490.2	29.520	271	165	10	61	307	15	283	4.10e-17	81.3
Msa1354250	AT3G50210.2	31.481	162	106	2	162	318	52	213	1.24e-16	79.0
Msa1354250	AT2G30840.2	27.511	229	148	6	63	279	57	279	2.16e-16	79.3
Msa1354250	AT1G02400.2	27.459	244	163	8	64	296	25	265	2.57e-16	78.6
Msa1354250	AT4G03070.1	24.262	305	184	10	63	337	14	301	2.20e-15	76.6
Msa1354250	AT4G23340.2	27.895	190	124	5	173	351	1	188	2.50e-15	74.3
Msa1354250	AT3G49630.2	30.380	158	108	2	162	318	62	218	6.70e-15	74.3
Msa1354250	AT3G46500.10	28.070	228	136	9	144	350	28	248	4.17e-13	68.9
Msa1354250	AT3G46500.1	28.070	228	136	9	144	350	28	248	4.17e-13	68.9
Msa1354250	AT1G52820.2	21.491	228	166	3	63	280	12	236	2.48e-12	66.6
Msa1354250	AT4G03050.2	35.398	113	65	2	205	316	257	362	2.52e-12	68.2
Msa1354250	AT4G03050.1	35.398	113	65	2	205	316	257	362	2.52e-12	68.2
Msa1354250	AT3G46500.4	28.889	180	106	7	173	337	1	173	4.16e-12	64.7
Msa1354250	AT3G46480.1	26.459	257	144	9	104	337	35	269	4.27e-12	66.6
Msa1354250	AT4G16770.1	26.636	214	130	7	63	256	22	228	6.85e-11	62.4

Find 94 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACCTCTTCAATAAAATTTA+AGG	0.053722	tig0014473:+47364	None:intergenic
TCCTTCATGCCACATGAATT+TGG	0.134894	tig0014473:+47229	None:intergenic
GGGATTAAAGCCAAGAATTT+AGG	0.142346	tig0014473:-45252	Msa1354250:CDS
TGCCGCCGCCGGCCGATCTA+AGG	0.187616	tig0014473:+47288	None:intergenic
GCATGAAGGATTCACAATTA+TGG	0.242045	tig0014473:-47216	Msa1354250:CDS
GTGTTGTTGTGAATGATATT+AGG	0.257884	tig0014473:-45389	Msa1354250:CDS
CCTTCATGCCACATGAATTT+GGG	0.265626	tig0014473:+47230	None:intergenic
TTGACCGTCAAGGATTATAT+TGG	0.267073	tig0014473:-45273	Msa1354250:CDS
GTGTTAACAACAAGTGTATT+TGG	0.278829	tig0014473:+45465	None:intergenic
CCTATTTGTTCCATAGCATT+AGG	0.291601	tig0014473:+47437	None:intergenic
TCTAAATGAAGAAAAGTCTA+AGG	0.297886	tig0014473:+47586	None:intergenic
CATGAAGGATTCACAATTAT+GGG	0.326541	tig0014473:-47215	Msa1354250:CDS
ACCTCTTCAATAAAATTTAA+GGG	0.330927	tig0014473:+47365	None:intergenic
CTAGTGTCTTCATTTGCTTT+TGG	0.331692	tig0014473:+45736	None:intergenic
TGATTATTTGGTTTCTCCTT+GGG	0.333536	tig0014473:-45328	Msa1354250:CDS
GGATTAAAGCCAAGAATTTA+GGG	0.333538	tig0014473:-45251	Msa1354250:CDS
TTGATTATTTGGTTTCTCCT+TGG	0.335325	tig0014473:-45329	Msa1354250:CDS
CTAATGACTACAAACGGTTT+TGG	0.342387	tig0014473:-47160	Msa1354250:intron
GTCCATTTGTTTGACTTTGA+TGG	0.349561	tig0014473:+45535	None:intergenic
CCTAATGCTATGGAACAAAT+AGG	0.352189	tig0014473:-47437	Msa1354250:CDS
GGATCATTGAGATCAATAAT+TGG	0.362754	tig0014473:+47458	None:intergenic
TGAGACCATGCATGTGAATC+AGG	0.372304	tig0014473:+47557	None:intergenic
TGACCGTCAAGGATTATATT+GGG	0.373275	tig0014473:-45272	Msa1354250:CDS
CAAAACCGTTTGTAGTCATT+AGG	0.376460	tig0014473:+47161	None:intergenic
TGTTGTTGTGAATGATATTA+GGG	0.377032	tig0014473:-45388	Msa1354250:CDS
TTCATATATTGTCAAATTCA+AGG	0.379962	tig0014473:-45431	Msa1354250:CDS
GTATGCCATGATTCTTCAAT+TGG	0.384058	tig0014473:+47387	None:intergenic
GGAGAAACCAAATAATCAAC+TGG	0.391028	tig0014473:+45333	None:intergenic
AACATGATATTCAACATATT+AGG	0.394181	tig0014473:-45699	Msa1354250:CDS
TTTCACAAGAACAAAACAAA+TGG	0.399660	tig0014473:-45674	Msa1354250:CDS
TCCTTCCAAGGAGAAACTTA+AGG	0.412885	tig0014473:-47312	Msa1354250:CDS
GCCCTTAGATCGGCCGGCGG+CGG	0.426454	tig0014473:-47290	Msa1354250:CDS
TTGATGGAGGATTGTGAAAA+GGG	0.432707	tig0014473:+45551	None:intergenic
AGATCGGCCGGCGGCGGCAC+CGG	0.433339	tig0014473:-47284	Msa1354250:CDS
CCCAAATTCATGTGGCATGA+AGG	0.434429	tig0014473:-47230	Msa1354250:CDS
ACCGTATCCGGTGCCGCCGC+CGG	0.443067	tig0014473:+47277	None:intergenic
GCCGGCGGCGGCACCGGATA+CGG	0.448321	tig0014473:-47278	Msa1354250:CDS
TATTCGTGCTCTACCGTATC+CGG	0.453591	tig0014473:+47265	None:intergenic
CAAATATTCAAAGAAGGTGT+AGG	0.458555	tig0014473:-45510	Msa1354250:CDS
CTCCATCAAAGTCAAACAAA+TGG	0.468884	tig0014473:-45537	Msa1354250:CDS
AATCCCAATATAATCCTTGA+CGG	0.475312	tig0014473:+45269	None:intergenic
TTCACAAGAACAAAACAAAT+GGG	0.478547	tig0014473:-45673	Msa1354250:CDS
TATTGAAGAGGTTGAAGAAG+AGG	0.485274	tig0014473:-47354	Msa1354250:CDS
GCCGCCGCCGGCCGATCTAA+GGG	0.491190	tig0014473:+47289	None:intergenic
TTTGATGGAGGATTGTGAAA+AGG	0.492761	tig0014473:+45550	None:intergenic
TATTTGGTTTCTCCTTGGGT+TGG	0.506231	tig0014473:-45324	Msa1354250:CDS
GCCTTCCAATTGAAGAATCA+TGG	0.506488	tig0014473:-47392	Msa1354250:CDS
AAGGGCCTTAAGTTTCTCCT+TGG	0.507648	tig0014473:+47307	None:intergenic
CACATGAATTTGGGGAAGAA+TGG	0.513540	tig0014473:+47239	None:intergenic
ACAACAAGTGTATTTGGATG+AGG	0.513670	tig0014473:+45471	None:intergenic
CAAGAACAAAACAAATGGGT+TGG	0.521644	tig0014473:-45669	Msa1354250:CDS
CTAAATGAAGAAAAGTCTAA+GGG	0.525036	tig0014473:+47587	None:intergenic
GTATTTGGATGAGGCTCCAC+AGG	0.527708	tig0014473:+45480	None:intergenic
GCCTTAAGTTTCTCCTTGGA+AGG	0.527738	tig0014473:+47311	None:intergenic
ATGATTGTCATAGCATCCAT+TGG	0.528319	tig0014473:+47502	None:intergenic
TCTGGCCTAATGACTACAAA+CGG	0.536633	tig0014473:-47166	Msa1354250:CDS
CTTAAGGCCCTTAGATCGGC+CGG	0.536954	tig0014473:-47296	Msa1354250:CDS
AAAAGGGATGTGTCTGTGTG+TGG	0.538837	tig0014473:+45567	None:intergenic
GGACTTCAAATATTCAAAGA+AGG	0.539580	tig0014473:-45516	Msa1354250:CDS
TCTCAATGATCCTAATGCTA+TGG	0.543103	tig0014473:-47447	Msa1354250:CDS
GCCATGATTCTTCAATTGGA+AGG	0.544955	tig0014473:+47391	None:intergenic
AATACACTTGTTGTTAACAC+TGG	0.546004	tig0014473:-45462	Msa1354250:CDS
AAAGGGATGTGTCTGTGTGT+GGG	0.550575	tig0014473:+45568	None:intergenic
AAATATTCAAAGAAGGTGTA+GGG	0.556132	tig0014473:-45509	Msa1354250:CDS
CATTTGTTTGACTTTGATGG+AGG	0.558108	tig0014473:+45538	None:intergenic
GAAACTTAAGGCCCTTAGAT+CGG	0.567123	tig0014473:-47300	Msa1354250:CDS
CTGCAGAGGGTGATCACGAT+AGG	0.569972	tig0014473:+47625	None:intergenic
TATGACAATCATGATGAAGA+TGG	0.571656	tig0014473:-47491	Msa1354250:CDS
TAGGCCTTGCATGTGAGAAG+TGG	0.578181	tig0014473:-47418	Msa1354250:CDS
AGTGATGATTTCACATCCAA+TGG	0.580688	tig0014473:-47518	Msa1354250:CDS
CTTCATGCCACATGAATTTG+GGG	0.589473	tig0014473:+47231	None:intergenic
CTTTGCCTGATTCACATGCA+TGG	0.593500	tig0014473:-47562	Msa1354250:CDS
GTTGGTTCTAACAACCATGT+TGG	0.601162	tig0014473:-45651	Msa1354250:CDS
AGGCCTTGCATGTGAGAAGT+GGG	0.602877	tig0014473:-47417	Msa1354250:CDS
CACCCCACTTCTCACATGCA+AGG	0.608207	tig0014473:+47414	None:intergenic
TGGTCTCAATCTAATGATGA+TGG	0.617219	tig0014473:-47542	Msa1354250:CDS
TATTAGGGATAGATATTCTG+TGG	0.617579	tig0014473:-45373	Msa1354250:CDS
AAGGGATGTGTCTGTGTGTG+GGG	0.619468	tig0014473:+45569	None:intergenic
GAGAAACCAAATAATCAACT+GGG	0.623914	tig0014473:+45334	None:intergenic
ATAATATGATGAAGCTGCAG+AGG	0.624503	tig0014473:+47611	None:intergenic
AGGTGTAGGGTATGTTCCTG+TGG	0.626553	tig0014473:-45496	Msa1354250:CDS
CATTCTTCCCCAAATTCATG+TGG	0.632760	tig0014473:-47238	Msa1354250:CDS
ACGGTCAAAGCACGAAAACG+TGG	0.634804	tig0014473:+45288	None:intergenic
TTAGTTGCATTGCTCCAACA+TGG	0.643659	tig0014473:+45637	None:intergenic
GATTAAAGCCAAGAATTTAG+GGG	0.646465	tig0014473:-45250	Msa1354250:CDS
TAATATGATGAAGCTGCAGA+GGG	0.649379	tig0014473:+47612	None:intergenic
ATTAAAGCCAAGAATTTAGG+GGG	0.652080	tig0014473:-45249	Msa1354250:CDS
ATGAAGGATTCACAATTATG+GGG	0.667453	tig0014473:-47214	Msa1354250:CDS
TAAATGAAGAAAAGTCTAAG+GGG	0.670540	tig0014473:+47588	None:intergenic
AAGGCCCTTAGATCGGCCGG+CGG	0.682893	tig0014473:-47293	Msa1354250:CDS
AAAGAATTATCACCAACCCA+AGG	0.683360	tig0014473:+45312	None:intergenic
AGAAACCAAATAATCAACTG+GGG	0.694788	tig0014473:+45335	None:intergenic
GAAACCAAATAATCAACTGG+GGG	0.700761	tig0014473:+45336	None:intergenic
GGCCTTGCATGTGAGAAGTG+GGG	0.750401	tig0014473:-47416	Msa1354250:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTATTTTTGAAAAATGAA+GGG	+	tig0014473:46971-46990	None:intergenic	10.0%
!!!	TTTTTATTTTTGAAAAATGA+AGG	+	tig0014473:46972-46991	None:intergenic	10.0%
!!!	CTATTTAAATTGAAGTTTTT+AGG	-	tig0014473:46694-46713	Msa1354250:intron	15.0%
!!	ACCTCTTCAATAAAATTTAA+GGG	+	tig0014473:45491-45510	None:intergenic	20.0%
!!	AACCTCTTCAATAAAATTTA+AGG	+	tig0014473:45492-45511	None:intergenic	20.0%
!!	TTACAATTTCTCGTAATTAA+TGG	-	tig0014473:45813-45832	Msa1354250:intron	20.0%
!!	ACCATTACAAATTTATGATA+TGG	-	tig0014473:45838-45857	Msa1354250:intron	20.0%
!!	CCATTACAAATTTATGATAT+GGG	-	tig0014473:45839-45858	Msa1354250:intron	20.0%
!!	AAAAAGTGGTTAAATACATA+AGG	-	tig0014473:45995-46014	Msa1354250:intron	20.0%
!!	TATCAAAATCCTATGATATA+TGG	-	tig0014473:46279-46298	Msa1354250:intron	20.0%
!!	ATATATAGAAAAATGCTTTG+TGG	+	tig0014473:46412-46431	None:intergenic	20.0%
!!!	TTGAACGATTTTAAAATAGA+AGG	+	tig0014473:46627-46646	None:intergenic	20.0%
!!	CAAGTTCAAAATTTGAAAAA+GGG	+	tig0014473:46657-46676	None:intergenic	20.0%
!!	TCAAGTTCAAAATTTGAAAA+AGG	+	tig0014473:46658-46677	None:intergenic	20.0%
!!!	CAAATTTTGAACTTGAAAAA+TGG	-	tig0014473:46662-46681	Msa1354250:intron	20.0%
!!	AACATGATATTCAACATATT+AGG	-	tig0014473:47154-47173	Msa1354250:intron	20.0%
!!	TTCATATATTGTCAAATTCA+AGG	-	tig0014473:47422-47441	Msa1354250:CDS	20.0%
!	TAAATGAAGAAAAGTCTAAG+GGG	+	tig0014473:45268-45287	None:intergenic	25.0%
!	CTAAATGAAGAAAAGTCTAA+GGG	+	tig0014473:45269-45288	None:intergenic	25.0%
!	TCTAAATGAAGAAAAGTCTA+AGG	+	tig0014473:45270-45289	None:intergenic	25.0%
!!	ACCCTTAAATTTTATTGAAG+AGG	-	tig0014473:45487-45506	Msa1354250:CDS	25.0%
!	CCCATATCATAAATTTGTAA+TGG	+	tig0014473:45842-45861	None:intergenic	25.0%
!	GCAAGTAAATAACTAAAAAG+TGG	-	tig0014473:45981-46000	Msa1354250:intron	25.0%
!	ACTAAAATAATTACACCCTA+AGG	-	tig0014473:46105-46124	Msa1354250:intron	25.0%
!	AGTGTAAAATGAAAAGATCA+AGG	+	tig0014473:46244-46263	None:intergenic	25.0%
!	AAAATCCTATGATATATGGT+TGG	-	tig0014473:46283-46302	Msa1354250:intron	25.0%
!	TATAAATGCTCATCATATAG+AGG	-	tig0014473:46337-46356	Msa1354250:intron	25.0%
!	TTTGTAAGTGAGTGAAAATA+GGG	+	tig0014473:46597-46616	None:intergenic	25.0%
!!	TTTTGTAAGTGAGTGAAAAT+AGG	+	tig0014473:46598-46617	None:intergenic	25.0%
!	TTTCACTCACTTACAAAAAT+TGG	-	tig0014473:46600-46619	Msa1354250:intron	25.0%
!!!	GGTTTTGTTTTTGTATACAA+TGG	-	tig0014473:46715-46734	Msa1354250:intron	25.0%
!!	GTTTTTGTATACAATGGAAT+AGG	-	tig0014473:46721-46740	Msa1354250:intron	25.0%
!	TTCAATATAGTTTGAATCTC+CGG	+	tig0014473:46860-46879	None:intergenic	25.0%
!	TTTCACAAGAACAAAACAAA+TGG	-	tig0014473:47179-47198	Msa1354250:CDS	25.0%
!	TTCACAAGAACAAAACAAAT+GGG	-	tig0014473:47180-47199	Msa1354250:CDS	25.0%
!!	AAATATTCAAAGAAGGTGTA+GGG	-	tig0014473:47344-47363	Msa1354250:CDS	25.0%
!	TGTTGTTGTGAATGATATTA+GGG	-	tig0014473:47465-47484	Msa1354250:CDS	25.0%
!!!	TATTCTGTGGCTTATTTTTA+TGG	-	tig0014473:47493-47512	Msa1354250:CDS	25.0%
	TATGACAATCATGATGAAGA+TGG	-	tig0014473:45362-45381	Msa1354250:CDS	30.0%
	GGATCATTGAGATCAATAAT+TGG	+	tig0014473:45398-45417	None:intergenic	30.0%
	CATGAAGGATTCACAATTAT+GGG	-	tig0014473:45638-45657	Msa1354250:CDS	30.0%
	ATGAAGGATTCACAATTATG+GGG	-	tig0014473:45639-45658	Msa1354250:CDS	30.0%
!!	TCTTTTTAGCATCATTGGAT+GGG	+	tig0014473:45667-45686	None:intergenic	30.0%
!!	ATCTTTTTAGCATCATTGGA+TGG	+	tig0014473:45668-45687	None:intergenic	30.0%
!!!	TGCTACTTGTTTTTGTTAGA+AGG	+	tig0014473:46038-46057	None:intergenic	30.0%
	AAACAAGTAGCAAATCCTAT+AGG	-	tig0014473:46046-46065	Msa1354250:intron	30.0%
	GATCCAAATCCTATGATATA+TGG	-	tig0014473:46359-46378	Msa1354250:intron	30.0%
	TTGTATACAATGGAATAGGT+AGG	-	tig0014473:46725-46744	Msa1354250:intron	30.0%
	AATGTGAAAACATGAAGACA+AGG	+	tig0014473:46781-46800	None:intergenic	30.0%
	AAACTAATGACTAACTGATC+CGG	-	tig0014473:46838-46857	Msa1354250:intron	30.0%
!	TTTTGTGTGTAGTGACATAA+TGG	-	tig0014473:47087-47106	Msa1354250:intron	30.0%
	GGACTTCAAATATTCAAAGA+AGG	-	tig0014473:47337-47356	Msa1354250:CDS	30.0%
!	CAAATATTCAAAGAAGGTGT+AGG	-	tig0014473:47343-47362	Msa1354250:CDS	30.0%
	GTGTTAACAACAAGTGTATT+TGG	+	tig0014473:47391-47410	None:intergenic	30.0%
!!	AATACACTTGTTGTTAACAC+TGG	-	tig0014473:47391-47410	Msa1354250:CDS	30.0%
!	GTGTTGTTGTGAATGATATT+AGG	-	tig0014473:47464-47483	Msa1354250:CDS	30.0%
	TATTAGGGATAGATATTCTG+TGG	-	tig0014473:47480-47499	Msa1354250:CDS	30.0%
	AGAAACCAAATAATCAACTG+GGG	+	tig0014473:47521-47540	None:intergenic	30.0%
	GAGAAACCAAATAATCAACT+GGG	+	tig0014473:47522-47541	None:intergenic	30.0%
!	TTGATTATTTGGTTTCTCCT+TGG	-	tig0014473:47524-47543	Msa1354250:CDS	30.0%
!	TGATTATTTGGTTTCTCCTT+GGG	-	tig0014473:47525-47544	Msa1354250:CDS	30.0%
	AATCCCAATATAATCCTTGA+CGG	+	tig0014473:47587-47606	None:intergenic	30.0%
	GGATTAAAGCCAAGAATTTA+GGG	-	tig0014473:47602-47621	Msa1354250:CDS	30.0%
	GATTAAAGCCAAGAATTTAG+GGG	-	tig0014473:47603-47622	Msa1354250:CDS	30.0%
	ATTAAAGCCAAGAATTTAGG+GGG	-	tig0014473:47604-47623	Msa1354250:CDS	30.0%
	TAATATGATGAAGCTGCAGA+GGG	+	tig0014473:45244-45263	None:intergenic	35.0%
	ATAATATGATGAAGCTGCAG+AGG	+	tig0014473:45245-45264	None:intergenic	35.0%
	TGGTCTCAATCTAATGATGA+TGG	-	tig0014473:45311-45330	Msa1354250:CDS	35.0%
	AGTGATGATTTCACATCCAA+TGG	-	tig0014473:45335-45354	Msa1354250:CDS	35.0%
	ATGATTGTCATAGCATCCAT+TGG	+	tig0014473:45354-45373	None:intergenic	35.0%
	TCTCAATGATCCTAATGCTA+TGG	-	tig0014473:45406-45425	Msa1354250:CDS	35.0%
	CCTATTTGTTCCATAGCATT+AGG	+	tig0014473:45419-45438	None:intergenic	35.0%
	CCTAATGCTATGGAACAAAT+AGG	-	tig0014473:45416-45435	Msa1354250:CDS	35.0%
	GTATGCCATGATTCTTCAAT+TGG	+	tig0014473:45469-45488	None:intergenic	35.0%
	TATTGAAGAGGTTGAAGAAG+AGG	-	tig0014473:45499-45518	Msa1354250:CDS	35.0%
	GCATGAAGGATTCACAATTA+TGG	-	tig0014473:45637-45656	Msa1354250:CDS	35.0%
!!	CTTTTTAGCATCATTGGATG+GGG	+	tig0014473:45666-45685	None:intergenic	35.0%
!!	CCAGATCTTTTTAGCATCAT+TGG	+	tig0014473:45672-45691	None:intergenic	35.0%
	CCAATGATGCTAAAAAGATC+TGG	-	tig0014473:45669-45688	Msa1354250:CDS	35.0%
	CAAAACCGTTTGTAGTCATT+AGG	+	tig0014473:45695-45714	None:intergenic	35.0%
!	CTAATGACTACAAACGGTTT+TGG	-	tig0014473:45693-45712	Msa1354250:CDS	35.0%
!!	ACTAGTCACTTTAGAGTGTA+AGG	-	tig0014473:45885-45904	Msa1354250:intron	35.0%
!!	TAGTTCTAGCAAATGCCTAT+AGG	+	tig0014473:46064-46083	None:intergenic	35.0%
	TTTAGCAAAGCTACACCTTA+GGG	+	tig0014473:46123-46142	None:intergenic	35.0%
!	TTTTAGCAAAGCTACACCTT+AGG	+	tig0014473:46124-46143	None:intergenic	35.0%
	CTAAGCCAACCATATATCAT+AGG	+	tig0014473:46291-46310	None:intergenic	35.0%
!!	CTATGATATATGGTTGGCTT+AGG	-	tig0014473:46289-46308	Msa1354250:intron	35.0%
	TTCGCAATATATAGCAGTTC+TGG	+	tig0014473:46317-46336	None:intergenic	35.0%
	CAGCCATATATCATAGGATT+TGG	+	tig0014473:46365-46384	None:intergenic	35.0%
	CAAATCCTATGATATATGGC+TGG	-	tig0014473:46363-46382	Msa1354250:intron	35.0%
	TTTAGCCAGCCATATATCAT+AGG	+	tig0014473:46371-46390	None:intergenic	35.0%
	TGAAAACATGAAGACAAGGT+CGG	+	tig0014473:46777-46796	None:intergenic	35.0%
!!!	CCTAGTACTTACTTTTTGTG+GGG	+	tig0014473:46806-46825	None:intergenic	35.0%
!!!	CCCTAGTACTTACTTTTTGT+GGG	+	tig0014473:46807-46826	None:intergenic	35.0%
	CCCACAAAAAGTAAGTACTA+GGG	-	tig0014473:46804-46823	Msa1354250:intron	35.0%
!!!	TCCCTAGTACTTACTTTTTG+TGG	+	tig0014473:46808-46827	None:intergenic	35.0%
!	CTAGTGTCTTCATTTGCTTT+TGG	+	tig0014473:47120-47139	None:intergenic	35.0%
	CAAGAACAAAACAAATGGGT+TGG	-	tig0014473:47184-47203	Msa1354250:CDS	35.0%
	TTGATGGAGGATTGTGAAAA+GGG	+	tig0014473:47305-47324	None:intergenic	35.0%
	TTTGATGGAGGATTGTGAAA+AGG	+	tig0014473:47306-47325	None:intergenic	35.0%
!	CATTTGTTTGACTTTGATGG+AGG	+	tig0014473:47318-47337	None:intergenic	35.0%
	CTCCATCAAAGTCAAACAAA+TGG	-	tig0014473:47316-47335	Msa1354250:CDS	35.0%
!	GTCCATTTGTTTGACTTTGA+TGG	+	tig0014473:47321-47340	None:intergenic	35.0%
	ACAACAAGTGTATTTGGATG+AGG	+	tig0014473:47385-47404	None:intergenic	35.0%
	GAAACCAAATAATCAACTGG+GGG	+	tig0014473:47520-47539	None:intergenic	35.0%
	GGAGAAACCAAATAATCAAC+TGG	+	tig0014473:47523-47542	None:intergenic	35.0%
	AAAGAATTATCACCAACCCA+AGG	+	tig0014473:47544-47563	None:intergenic	35.0%
	TTGACCGTCAAGGATTATAT+TGG	-	tig0014473:47580-47599	Msa1354250:CDS	35.0%
	TGACCGTCAAGGATTATATT+GGG	-	tig0014473:47581-47600	Msa1354250:CDS	35.0%
	GGGATTAAAGCCAAGAATTT+AGG	-	tig0014473:47601-47620	Msa1354250:CDS	35.0%
	GCCTTCCAATTGAAGAATCA+TGG	-	tig0014473:45461-45480	Msa1354250:CDS	40.0%
	GCCATGATTCTTCAATTGGA+AGG	+	tig0014473:45465-45484	None:intergenic	40.0%
!	ACTCTTTTCTCTTCCTTCCA+AGG	-	tig0014473:45529-45548	Msa1354250:CDS	40.0%
	TCCTTCCAAGGAGAAACTTA+AGG	-	tig0014473:45541-45560	Msa1354250:CDS	40.0%
	GAAACTTAAGGCCCTTAGAT+CGG	-	tig0014473:45553-45572	Msa1354250:CDS	40.0%
	CACATGAATTTGGGGAAGAA+TGG	+	tig0014473:45617-45636	None:intergenic	40.0%
	CATTCTTCCCCAAATTCATG+TGG	-	tig0014473:45615-45634	Msa1354250:CDS	40.0%
	CTTCATGCCACATGAATTTG+GGG	+	tig0014473:45625-45644	None:intergenic	40.0%
	CCTTCATGCCACATGAATTT+GGG	+	tig0014473:45626-45645	None:intergenic	40.0%
	TCCTTCATGCCACATGAATT+TGG	+	tig0014473:45627-45646	None:intergenic	40.0%
	TCTGGCCTAATGACTACAAA+CGG	-	tig0014473:45687-45706	Msa1354250:CDS	40.0%
!	GTTGCTCACTTTAGAGAAGT+TGG	+	tig0014473:45867-45886	None:intergenic	40.0%
	CCCCACAAAAAGTAAGTACT+AGG	-	tig0014473:46803-46822	Msa1354250:intron	40.0%
!!	GTTGGTTCTAACAACCATGT+TGG	-	tig0014473:47202-47221	Msa1354250:CDS	40.0%
	TTAGTTGCATTGCTCCAACA+TGG	+	tig0014473:47219-47238	None:intergenic	40.0%
!!!	ACCCATTGCTTTTTTTGGGT+CGG	+	tig0014473:47260-47279	None:intergenic	40.0%
!!!	CCAGACCCATTGCTTTTTTT+GGG	+	tig0014473:47264-47283	None:intergenic	40.0%
!	TATTTGGTTTCTCCTTGGGT+TGG	-	tig0014473:47529-47548	Msa1354250:CDS	40.0%
	CTTTGCCTGATTCACATGCA+TGG	-	tig0014473:45291-45310	Msa1354250:CDS	45.0%
	TGAGACCATGCATGTGAATC+AGG	+	tig0014473:45299-45318	None:intergenic	45.0%
	GCCTTAAGTTTCTCCTTGGA+AGG	+	tig0014473:45545-45564	None:intergenic	45.0%
	AAGGGCCTTAAGTTTCTCCT+TGG	+	tig0014473:45549-45568	None:intergenic	45.0%
	TATTCGTGCTCTACCGTATC+CGG	+	tig0014473:45591-45610	None:intergenic	45.0%
	CCCAAATTCATGTGGCATGA+AGG	-	tig0014473:45623-45642	Msa1354250:CDS	45.0%
	TCATGCACTTTCATGCAACG+TGG	-	tig0014473:45738-45757	Msa1354250:CDS	45.0%
	CATGCAACGTGGACAATCAT+AGG	-	tig0014473:45749-45768	Msa1354250:CDS	45.0%
!!!	TTTTTGGGTCGGGACAACAT+GGG	+	tig0014473:47249-47268	None:intergenic	45.0%
!!!	TTTTTTGGGTCGGGACAACA+TGG	+	tig0014473:47250-47269	None:intergenic	45.0%
	TCCCGACCCAAAAAAAGCAA+TGG	-	tig0014473:47255-47274	Msa1354250:CDS	45.0%
!!!	CCCATTGCTTTTTTTGGGTC+GGG	+	tig0014473:47259-47278	None:intergenic	45.0%
	CCCGACCCAAAAAAAGCAAT+GGG	-	tig0014473:47256-47275	Msa1354250:CDS	45.0%
	CCCAAAAAAAGCAATGGGTC+TGG	-	tig0014473:47261-47280	Msa1354250:CDS	45.0%
!!!	GCCAGACCCATTGCTTTTTT+TGG	+	tig0014473:47265-47284	None:intergenic	45.0%
	AAAGGGATGTGTCTGTGTGT+GGG	+	tig0014473:47288-47307	None:intergenic	45.0%
	AAAAGGGATGTGTCTGTGTG+TGG	+	tig0014473:47289-47308	None:intergenic	45.0%
	TGGACCCCCAGTTGATTATT+TGG	-	tig0014473:47513-47532	Msa1354250:CDS	45.0%
!	TTTTCGTGCTTTGACCGTCA+AGG	-	tig0014473:47570-47589	Msa1354250:CDS	45.0%
!	CAAAGCACCCCCTAAATTCT+TGG	+	tig0014473:47614-47633	None:intergenic	45.0%
!!	TATATATATATATATATTGT+AGG	-	tig0014473:46180-46199	Msa1354250:intron	5.0%
!!!	TTTTATTAAACTAAAATAAA+AGG	-	tig0014473:46554-46573	Msa1354250:intron	5.0%
!!!	TATTTCTTTAAAAATTATAT+TGG	-	tig0014473:46907-46926	Msa1354250:intron	5.0%
!!!	TTTTAAATAAAAAAATGAAA+TGG	+	tig0014473:46995-47014	None:intergenic	5.0%
	TAGGCCTTGCATGTGAGAAG+TGG	-	tig0014473:45435-45454	Msa1354250:CDS	50.0%
	AGGCCTTGCATGTGAGAAGT+GGG	-	tig0014473:45436-45455	Msa1354250:CDS	50.0%
!	CAACACAAGATGGCGGCAAA+CGG	+	tig0014473:46754-46773	None:intergenic	50.0%
	ACAAGGTCGGCAACACAAGA+TGG	+	tig0014473:46764-46783	None:intergenic	50.0%
	AAGGGATGTGTCTGTGTGTG+GGG	+	tig0014473:47287-47306	None:intergenic	50.0%
	AGGTGTAGGGTATGTTCCTG+TGG	-	tig0014473:47357-47376	Msa1354250:CDS	50.0%
	GTATTTGGATGAGGCTCCAC+AGG	+	tig0014473:47376-47395	None:intergenic	50.0%
	ACGGTCAAAGCACGAAAACG+TGG	+	tig0014473:47568-47587	None:intergenic	50.0%
	CTGCAGAGGGTGATCACGAT+AGG	+	tig0014473:45231-45250	None:intergenic	55.0%
	GGCCTTGCATGTGAGAAGTG+GGG	-	tig0014473:45437-45456	Msa1354250:CDS	55.0%
	CACCCCACTTCTCACATGCA+AGG	+	tig0014473:45442-45461	None:intergenic	55.0%
	CTTAAGGCCCTTAGATCGGC+CGG	-	tig0014473:45557-45576	Msa1354250:CDS	55.0%
	AGGTCGGCAACACAAGATGG+CGG	+	tig0014473:46761-46780	None:intergenic	55.0%
	AAGGCCCTTAGATCGGCCGG+CGG	-	tig0014473:45560-45579	Msa1354250:CDS	65.0%
	GCCCTTAGATCGGCCGGCGG+CGG	-	tig0014473:45563-45582	Msa1354250:CDS	75.0%
	GCCGCCGCCGGCCGATCTAA+GGG	+	tig0014473:45567-45586	None:intergenic	75.0%
	TGCCGCCGCCGGCCGATCTA+AGG	+	tig0014473:45568-45587	None:intergenic	75.0%
!!	ACCGTATCCGGTGCCGCCGC+CGG	+	tig0014473:45579-45598	None:intergenic	75.0%
!	AGATCGGCCGGCGGCGGCAC+CGG	-	tig0014473:45569-45588	Msa1354250:CDS	80.0%
!!	GCCGGCGGCGGCACCGGATA+CGG	-	tig0014473:45575-45594	Msa1354250:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
tig0014473	gene	45206	47669	45206	ID=Msa1354250;Name=Msa1354250
tig0014473	mRNA	45206	47669	45206	ID=Msa1354250-mRNA-1;Parent=Msa1354250;Name=Msa1354250-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0\|0\|0\|1\|1\|1\|2\|0\|359
tig0014473	exon	47161	47669	47161	ID=Msa1354250-mRNA-1:exon:9062;Parent=Msa1354250-mRNA-1
tig0014473	exon	45206	45776	45206	ID=Msa1354250-mRNA-1:exon:9061;Parent=Msa1354250-mRNA-1
tig0014473	CDS	47161	47669	47161	ID=Msa1354250-mRNA-1:cds;Parent=Msa1354250-mRNA-1
tig0014473	CDS	45206	45776	45206	ID=Msa1354250-mRNA-1:cds;Parent=Msa1354250-mRNA-1

Gene Sequence

>Msa1354250

ATGGCTACTACTCTTTCTGAAGCCTATCGTGATCACCCTCTGCAGCTTCATCATATTATCCCCTTAGACTTTTCTTCATTTAGAACTTTGCCTGATTCACATGCATGGTCTCAATCTAATGATGATGGTAGTGATGATTTCACATCCAATGGATGCTATGACAATCATGATGAAGATGGATCATGCATACCAATTATTGATCTCAATGATCCTAATGCTATGGAACAAATAGGCCTTGCATGTGAGAAGTGGGGTGCCTTCCAATTGAAGAATCATGGCATACCCTTAAATTTTATTGAAGAGGTTGAAGAAGAGGCAAAGAGACTCTTTTCTCTTCCTTCCAAGGAGAAACTTAAGGCCCTTAGATCGGCCGGCGGCGGCACCGGATACGGTAGAGCACGAATATCACCATTCTTCCCCAAATTCATGTGGCATGAAGGATTCACAATTATGGGGTCCCCATCCAATGATGCTAAAAAGATCTGGCCTAATGACTACAAACGGTTTTGTGACATAATGGAGAACTACCAAAAGCAAATGAAGACACTAGCAGAGAAACTAACAAACATGATATTCAACATATTAGGAATTTCACAAGAACAAAACAAATGGGTTGGTTCTAACAACCATGTTGGAGCAATGCAACTAAACTTCTACCCATGTTGTCCCGACCCAAAAAAAGCAATGGGTCTGGCCCCACACACAGACACATCCCTTTTCACAATCCTCCATCAAAGTCAAACAAATGGACTTCAAATATTCAAAGAAGGTGTAGGGTATGTTCCTGTGGAGCCTCATCCAAATACACTTGTTGTTAACACTGGTGACATTCTTCATATATTGTCAAATTCAAGGTTTCGATGTTCACTTCATCGTGTTGTTGTGAATGATATTAGGGATAGATATTCTGTGGCTTATTTTTATGGACCCCCAGTTGATTATTTGGTTTCTCCTTGGGTTGGTGATAATTCTTTGCCACGTTTTCGTGCTTTGACCGTCAAGGATTATATTGGGATTAAAGCCAAGAATTTAGGGGGTGCTTTGTCTTTGATTAGTACATTACTTGATCATGATGACTAA

Protein sequence

>Msa1354250

MATTLSEAYRDHPLQLHHIIPLDFSSFRTLPDSHAWSQSNDDGSDDFTSNGCYDNHDEDGSCIPIIDLNDPNAMEQIGLACEKWGAFQLKNHGIPLNFIEEVEEEAKRLFSLPSKEKLKALRSAGGGTGYGRARISPFFPKFMWHEGFTIMGSPSNDAKKIWPNDYKRFCDIMENYQKQMKTLAEKLTNMIFNILGISQEQNKWVGSNNHVGAMQLNFYPCCPDPKKAMGLAPHTDTSLFTILHQSQTNGLQIFKEGVGYVPVEPHPNTLVVNTGDILHILSNSRFRCSLHRVVVNDIRDRYSVAYFYGPPVDYLVSPWVGDNSLPRFRALTVKDYIGIKAKNLGGALSLISTLLDHDD*