AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1044050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1044050 MtrunA17_Chr5g0409821 99.270 411 3 0 1 411 1 411 0.0 849
Msa1044050 MtrunA17_Chr4g0057631 30.645 124 83 2 137 257 90 213 7.50e-13 70.1
Msa1044050 MtrunA17_Chr7g0225691 28.302 159 111 2 137 292 110 268 9.33e-13 69.7
Msa1044050 MtrunA17_Chr6g0457931 36.667 90 56 1 169 257 5 94 1.84e-12 68.2
Msa1044050 MtrunA17_Chr3g0102981 26.752 157 114 1 137 292 105 261 5.49e-12 67.4
Msa1044050 MtrunA17_Chr5g0447081 26.415 159 114 2 137 292 105 263 3.52e-11 64.7
Msa1044050 MtrunA17_Chr4g0037431 25.907 193 112 6 66 253 90 256 5.24e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1044050 AT1G32060.1 80.872 413 59 5 1 411 1 395 0.0 679
Msa1044050 AT3G27440.1 24.681 235 154 5 64 293 28 244 1.04e-15 79.3
Msa1044050 AT3G27440.2 24.681 235 154 5 64 293 28 244 1.39e-15 78.6
Msa1044050 AT3G27440.3 25.843 178 129 3 119 293 20 197 1.72e-14 75.1
Msa1044050 AT3G27190.1 33.065 124 80 2 137 257 119 242 2.84e-14 74.7
Msa1044050 AT1G55810.7 26.000 200 124 5 64 257 33 214 8.92e-14 73.2
Msa1044050 AT1G55810.2 26.000 200 124 5 64 257 43 224 9.43e-14 73.2
Msa1044050 AT1G55810.5 30.645 124 83 2 137 257 101 224 9.56e-14 73.2
Msa1044050 AT1G55810.4 30.645 124 83 2 137 257 101 224 9.56e-14 73.2
Msa1044050 AT1G55810.3 26.000 200 124 5 64 257 43 224 1.05e-13 73.2
Msa1044050 AT1G55810.1 26.000 200 124 5 64 257 43 224 1.05e-13 73.2
Msa1044050 AT1G55810.6 26.000 200 124 5 64 257 43 224 1.05e-13 73.2
Msa1044050 AT5G40870.1 28.302 159 111 2 137 292 119 277 4.73e-13 71.2
Msa1044050 AT1G26190.1 26.368 201 109 7 66 257 66 236 8.77e-11 64.3

Find 99 sgRNAs with CRISPR-Local

Find 527 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTCAATGACCAAGATTT+TGG 0.150126 7_2:-2221394 None:intergenic
AGTATTTAACACCCTCTTTC+TGG 0.157752 7_2:-2225755 None:intergenic
TTCTCGAGTCAGAGATCTTT+TGG 0.212624 7_2:+2225042 Msa1044050:CDS
TAATCATGTTACTGGTCTTT+TGG 0.213994 7_2:+2221347 Msa1044050:CDS
TTTGGATGATTACCATTCTT+TGG 0.234705 7_2:+2221203 Msa1044050:CDS
AGTGACTTCTCCATAGAATT+TGG 0.257225 7_2:-2227080 None:intergenic
CCTATTTATAATCATGTTAC+TGG 0.259857 7_2:+2221339 Msa1044050:CDS
TTGTTCTCTCTTTCTCTCTA+AGG 0.263380 7_2:-2220821 None:intergenic
TCTTATCTTCAAACCAACTA+TGG 0.263816 7_2:-2227164 None:intergenic
GAAATTTGCTTGGAAAATTC+AGG 0.264484 7_2:+2225099 Msa1044050:CDS
AAGTTGGATAGAGGATTATT+TGG 0.283269 7_2:-2220767 None:intergenic
CCAGTAACATGATTATAAAT+AGG 0.295466 7_2:-2221339 None:intergenic
CCAATATAAGCTTCAAAATC+AGG 0.308836 7_2:-2225295 None:intergenic
GAGTCAGGGTTTCCACCTTT+TGG 0.320180 7_2:-2221144 None:intergenic
TATATATACATACATAATAT+TGG 0.332409 7_2:+2227263 Msa1044050:three_prime_UTR
CATTATCATCTGGAATTAGT+TGG 0.339527 7_2:-2225704 None:intergenic
CCGTCATCAAACAAGTAAAC+TGG 0.339534 7_2:-2225783 None:intergenic
CTGATAAGTGTGTTTGAGTC+AGG 0.348587 7_2:-2221159 None:intergenic
ATGACGGTTCTACAATTTCA+TGG 0.358447 7_2:+2225799 Msa1044050:CDS
ATTGAGATGTTTGTTCTTAG+AGG 0.359760 7_2:-2220889 None:intergenic
ATCTTTCCTTCATTATCATC+TGG 0.360226 7_2:-2225714 None:intergenic
TCATTTCCTTTGTAAGTCTC+TGG 0.363648 7_2:-2225879 None:intergenic
AAGAAGAAGTGAGTTTAAGT+TGG 0.366190 7_2:-2220783 None:intergenic
ATTGGTCTAGCAGCTGATTC+AGG 0.370444 7_2:+2221060 Msa1044050:CDS
TATTAAACCACCCAAAATCT+TGG 0.372303 7_2:+2221383 Msa1044050:CDS
AGTTGGATAGAGGATTATTT+GGG 0.372468 7_2:-2220766 None:intergenic
AACCTCTCTTCCAAATTCTA+TGG 0.381744 7_2:+2227070 Msa1044050:CDS
ATATTCATATGCATGGACTA+TGG 0.386337 7_2:-2227505 None:intergenic
TCTTCAAACCAACTATGGTT+TGG 0.386867 7_2:-2227159 None:intergenic
AGTGAGTTTAAGTTGGATAG+AGG 0.388378 7_2:-2220776 None:intergenic
ATATTATGTATGTATATATA+AGG 0.388663 7_2:-2227260 None:intergenic
CCCAAAATCTTGGTCATTGA+AGG 0.390954 7_2:+2221393 Msa1044050:CDS
TAAGCTTTAGCTGCTCCTAC+TGG 0.408909 7_2:-2227226 None:intergenic
ATTATCATCTGGAATTAGTT+GGG 0.412929 7_2:-2225703 None:intergenic
TGGAAGAGAGGTTGCTTAAG+TGG 0.427841 7_2:-2227060 None:intergenic
TTTGAACAATTTGTCATCAC+TGG 0.433037 7_2:+2227470 Msa1044050:three_prime_UTR
CACAACCACTGTGATATGTT+TGG 0.440482 7_2:+2221185 Msa1044050:CDS
CCTGTTCCATTGTTGCTACC+AGG 0.444673 7_2:-2227130 None:intergenic
TACCATTCTTTGGATAGAAC+TGG 0.449333 7_2:+2221213 Msa1044050:CDS
ATAGGTGTCAGTTGTGGAAA+TGG 0.452646 7_2:+2226994 Msa1044050:intron
TACCAGTTCTATCCAAAGAA+TGG 0.458109 7_2:-2221215 None:intergenic
GCAATGAGGTGAAATTTGCT+TGG 0.466967 7_2:+2225089 Msa1044050:CDS
TCATCTGGAATTAGTTGGGT+TGG 0.467987 7_2:-2225699 None:intergenic
CAAAACAAAGGGAGTTTAGC+AGG 0.468657 7_2:-2220685 None:intergenic
AGATCAAAATCATTAGCTCT+TGG 0.471925 7_2:-2221267 None:intergenic
GGTCTCTTCCAAACCATAGT+TGG 0.473792 7_2:+2227151 Msa1044050:CDS
CCTGGTAGCAACAATGGAAC+AGG 0.476412 7_2:+2227130 Msa1044050:CDS
TTGAGCAGATAGTAGCAAGC+AGG 0.481692 7_2:+2227194 Msa1044050:CDS
AGTAGGAGCAGCTAAAGCTT+AGG 0.484112 7_2:+2227228 Msa1044050:CDS
TTGGGTGGTTTAATAAGCTC+AGG 0.487228 7_2:-2221375 None:intergenic
ACAATAATATTCAGTGAGAA+TGG 0.495990 7_2:+2220840 Msa1044050:exon
CTAGCAGCTGATTCAGGATG+TGG 0.497361 7_2:+2221066 Msa1044050:CDS
TTTGTAAGTCTCTGGTCCAT+AGG 0.514381 7_2:-2225871 None:intergenic
CTCCATAGAATTTGGAAGAG+AGG 0.516431 7_2:-2227072 None:intergenic
TATGTATGTATATATAAGGC+AGG 0.519140 7_2:-2227256 None:intergenic
CCATAGGAAAATTTAATGCC+AGG 0.522813 7_2:-2225855 None:intergenic
AAACTTACATGCTCTTATCC+TGG 0.529194 7_2:+2225837 Msa1044050:CDS
GAACTTTAAATCAAAACAAA+GGG 0.529797 7_2:-2220696 None:intergenic
CCAGTTTACTTGTTTGATGA+CGG 0.531064 7_2:+2225783 Msa1044050:CDS
TACTTGATAACATGTGGAGC+AGG 0.532032 7_2:+2221018 Msa1044050:CDS
CTAATTCCAGATGATAATGA+AGG 0.532317 7_2:+2225708 Msa1044050:CDS
GACTCACAGACAATTGTGAT+TGG 0.537034 7_2:+2221042 Msa1044050:CDS
AAGGAAAGATATTAAGAGTG+AGG 0.539424 7_2:+2225727 Msa1044050:CDS
TGATAAGTGTGTTTGAGTCA+GGG 0.540780 7_2:-2221158 None:intergenic
CTGTTCCATTGTTGCTACCA+GGG 0.541192 7_2:-2227129 None:intergenic
ATGTTGTATTAATAATATAG+AGG 0.542686 7_2:+2227405 Msa1044050:three_prime_UTR
ACAAGTTAAAGCTATTAAAG+AGG 0.546142 7_2:+2221299 Msa1044050:CDS
TGGAACACATAAAATATATG+AGG 0.549816 7_2:-2220721 None:intergenic
GATTTCCCTGGTAGCAACAA+TGG 0.550594 7_2:+2227124 Msa1044050:CDS
AGTGAGGTTGATCCAGAAAG+AGG 0.553461 7_2:+2225743 Msa1044050:CDS
AACATACAATACATGAAATG+TGG 0.565555 7_2:-2227339 None:intergenic
CAAGTTAAAGCTATTAAAGA+GGG 0.566898 7_2:+2221300 Msa1044050:CDS
AGAACTGGTAGAAAAGAGAA+AGG 0.567928 7_2:+2221228 Msa1044050:CDS
GGAACTTTAAATCAAAACAA+AGG 0.576138 7_2:-2220697 None:intergenic
CGTCATCAAACAAGTAAACT+GGG 0.577268 7_2:-2225782 None:intergenic
TGAGCAGATAGTAGCAAGCA+GGG 0.579633 7_2:+2227195 Msa1044050:CDS
TTGAAGCATGCTGATTTCCC+TGG 0.586959 7_2:+2227112 Msa1044050:CDS
CATGTAAGTTTCCTTCCACA+TGG 0.594474 7_2:-2225825 None:intergenic
ACACAGTCTTGAAAGTATCA+AGG 0.597310 7_2:+2225252 Msa1044050:CDS
TTTCATGGATACCATGTGGA+AGG 0.599237 7_2:+2225814 Msa1044050:CDS
GTGAGGTTGATCCAGAAAGA+GGG 0.602515 7_2:+2225744 Msa1044050:CDS
AGAAGATACTTGATAACATG+TGG 0.602583 7_2:+2221012 Msa1044050:CDS
AACACATAAAATATATGAGG+TGG 0.602665 7_2:-2220718 None:intergenic
GGTGGTTTAATAAGCTCAGG+AGG 0.603286 7_2:-2221372 None:intergenic
GCAGCAGAACCTCCAAAAGG+TGG 0.608673 7_2:+2221132 Msa1044050:CDS
GGTGCAGCAGAACCTCCAAA+AGG 0.611239 7_2:+2221129 Msa1044050:CDS
GTGTCAGTTGTGGAAATGGA+TGG 0.614489 7_2:+2226998 Msa1044050:CDS
CAGAGAGACATGGCGGAACG+TGG 0.615135 7_2:+2225229 Msa1044050:intron
AGAGACTTACAAAGGAAATG+AGG 0.618923 7_2:+2225881 Msa1044050:CDS
ACAAATATTTCAGAGAGACA+TGG 0.624789 7_2:+2225219 Msa1044050:intron
TCAAGGCTAGCATTGAAGCA+AGG 0.642202 7_2:+2225269 Msa1044050:CDS
CTACTTAGACATTAGCAATG+AGG 0.647945 7_2:+2225075 Msa1044050:CDS
TGTGCAATAGGTGTCAGTTG+TGG 0.648349 7_2:+2226988 Msa1044050:intron
AGCAGGGCTGAGACTCCAGT+AGG 0.659219 7_2:+2227211 Msa1044050:CDS
ACAATTTCATGGATACCATG+TGG 0.667312 7_2:+2225810 Msa1044050:CDS
TACATACATAATATTGGACA+AGG 0.682019 7_2:+2227269 Msa1044050:three_prime_UTR
TATGGACCAGAGACTTACAA+AGG 0.682242 7_2:+2225873 Msa1044050:CDS
AATATTTCAGAGAGACATGG+CGG 0.751503 7_2:+2225222 Msa1044050:intron
ATCATCCAAACATATCACAG+TGG 0.763501 7_2:-2221190 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATAAAAGATAGAATA+TGG - chr7_2:2223450-2223469 None:intergenic 10.0%
!! TCTTTATAAAATTATATCAA+AGG - chr7_2:2224211-2224230 None:intergenic 10.0%
!! ATATTATGTATGTATATATA+AGG - chr7_2:2227263-2227282 None:intergenic 10.0%
!! TATATATACATACATAATAT+TGG + chr7_2:2227263-2227282 Msa1044050:three_prime_UTR 10.0%
!!! AAAAATAAGAAAATGATTTT+GGG - chr7_2:2227312-2227331 None:intergenic 10.0%
!!! TGAAACAGATATTTTTTAAA+TGG - chr7_2:2220654-2220673 None:intergenic 15.0%
!!! ATATATTCTAAGAAAAAGTT+TGG - chr7_2:2220744-2220763 None:intergenic 15.0%
!! ATATGAATTTATCTATAAGA+GGG + chr7_2:2224166-2224185 Msa1044050:intron 15.0%
!!! TAAAATTATATCAAAGGTTT+TGG - chr7_2:2224205-2224224 None:intergenic 15.0%
!! CAATCATAAAAAAATAGATA+AGG - chr7_2:2224817-2224836 None:intergenic 15.0%
!! ATATTTGTCAAAAAATTGTT+AGG - chr7_2:2225207-2225226 None:intergenic 15.0%
!! TATAAATCTACAGTAAATAA+TGG + chr7_2:2226013-2226032 Msa1044050:intron 15.0%
!! TTCTATTAGTTATTATCTAA+AGG - chr7_2:2226141-2226160 None:intergenic 15.0%
!! TCAGTTTAAAAAACAATTAT+AGG + chr7_2:2226736-2226755 Msa1044050:intron 15.0%
!! CAGTTTAAAAAACAATTATA+GGG + chr7_2:2226737-2226756 Msa1044050:intron 15.0%
!! AGTTTAAAAAACAATTATAG+GGG + chr7_2:2226738-2226757 Msa1044050:intron 15.0%
!!! TATTTGCTATAGTTTTATAA+AGG - chr7_2:2226903-2226922 None:intergenic 15.0%
!!! TTTTTAAATTTTTGTGCAAT+AGG + chr7_2:2226976-2226995 Msa1044050:intron 15.0%
!!! CAAAAATAAGAAAATGATTT+TGG - chr7_2:2227313-2227332 None:intergenic 15.0%
!! ATGTTGTATTAATAATATAG+AGG + chr7_2:2227405-2227424 Msa1044050:three_prime_UTR 15.0%
!! AAAAAAAATATTCATATGCA+TGG - chr7_2:2227515-2227534 None:intergenic 15.0%
!!! GTAAACAACAATTTTGATTT+TGG - chr7_2:2220632-2220651 None:intergenic 20.0%
!! GAACTTTAAATCAAAACAAA+GGG - chr7_2:2220699-2220718 None:intergenic 20.0%
!!! TTGAATTTTATCTAGTAAGA+TGG - chr7_2:2221466-2221485 None:intergenic 20.0%
!! ATAAAATTCAAAATTAGCGA+CGG + chr7_2:2221475-2221494 Msa1044050:intron 20.0%
!!! ACATTAGACATTTTTATCTA+TGG - chr7_2:2221620-2221639 None:intergenic 20.0%
!!! ATTTTATTGTTAGTTATGTC+AGG - chr7_2:2221812-2221831 None:intergenic 20.0%
!! CTTGGATAGAAAATAAATTA+TGG + chr7_2:2222810-2222829 Msa1044050:intron 20.0%
!!! AATGATGAATTCATTTTACT+GGG - chr7_2:2223287-2223306 None:intergenic 20.0%
!! TTGAAATTCTACATTATATG+AGG - chr7_2:2224086-2224105 None:intergenic 20.0%
!! TATAGATAAATTCATATCAC+CGG - chr7_2:2224163-2224182 None:intergenic 20.0%
!! GATATGAATTTATCTATAAG+AGG + chr7_2:2224165-2224184 Msa1044050:intron 20.0%
!! AGAATATTACACAAAGAAAT+TGG + chr7_2:2224228-2224247 Msa1044050:intron 20.0%
!!! TTTCTTATTTGAAGAATTTC+AGG - chr7_2:2224466-2224485 None:intergenic 20.0%
!! TGAAATTCTTCAAATAAGAA+AGG + chr7_2:2224465-2224484 Msa1044050:intron 20.0%
!! TAAAACAATTAACTAAGAGA+TGG - chr7_2:2224723-2224742 None:intergenic 20.0%
!!! TCTATTTTTTTATGATTGTG+TGG + chr7_2:2224819-2224838 Msa1044050:intron 20.0%
!!! ATTTTACTATAGAGTAACAA+TGG - chr7_2:2224914-2224933 None:intergenic 20.0%
!! AAAACTTATGCAATTCTATA+AGG + chr7_2:2225151-2225170 Msa1044050:intron 20.0%
!! TACTTGTACAAATTATTCAT+TGG + chr7_2:2225587-2225606 Msa1044050:intron 20.0%
!! ATTGAAATCAAATAGTTGAT+TGG - chr7_2:2225933-2225952 None:intergenic 20.0%
!! CTGTAGATTTATAATTAAAC+TGG - chr7_2:2226057-2226076 None:intergenic 20.0%
!! TAAATATGTCACATTGTTAA+AGG + chr7_2:2226086-2226105 Msa1044050:intron 20.0%
!! AATAACACAATTACCAATTA+GGG + chr7_2:2226353-2226372 Msa1044050:intron 20.0%
!! AATGTAAAGTTACTTATGTT+TGG + chr7_2:2226457-2226476 Msa1044050:intron 20.0%
!! AGTTTCCTTCAAAAAAAAAA+TGG + chr7_2:2226499-2226518 Msa1044050:intron 20.0%
!! GTTTCCTTCAAAAAAAAAAT+GGG + chr7_2:2226500-2226519 Msa1044050:intron 20.0%
!!! ATTTCCCATTTTTTTTTTGA+AGG - chr7_2:2226507-2226526 None:intergenic 20.0%
!!! TCAAAAACAGTTTCTTTTTA+TGG + chr7_2:2226616-2226635 Msa1044050:intron 20.0%
!!! GACACAAAAGTTAAATATTT+TGG - chr7_2:2226944-2226963 None:intergenic 20.0%
! GGAACTTTAAATCAAAACAA+AGG - chr7_2:2220700-2220719 None:intergenic 25.0%
! AACACATAAAATATATGAGG+TGG - chr7_2:2220721-2220740 None:intergenic 25.0%
! TGGAACACATAAAATATATG+AGG - chr7_2:2220724-2220743 None:intergenic 25.0%
! ACAATAATATTCAGTGAGAA+TGG + chr7_2:2220840-2220859 Msa1044050:exon 25.0%
! ACAAGTTAAAGCTATTAAAG+AGG + chr7_2:2221299-2221318 Msa1044050:CDS 25.0%
! CAAGTTAAAGCTATTAAAGA+GGG + chr7_2:2221300-2221319 Msa1044050:CDS 25.0%
! CCAGTAACATGATTATAAAT+AGG - chr7_2:2221342-2221361 None:intergenic 25.0%
! CCTATTTATAATCATGTTAC+TGG + chr7_2:2221339-2221358 Msa1044050:CDS 25.0%
! GCATAGATATTACTTACATT+GGG - chr7_2:2221425-2221444 None:intergenic 25.0%
! AGCATAGATATTACTTACAT+TGG - chr7_2:2221426-2221445 None:intergenic 25.0%
! TTCATCACTAATGATATTAG+AGG - chr7_2:2221530-2221549 None:intergenic 25.0%
!!! TTTGTGTTTTTTTTGAGCAA+AGG + chr7_2:2221661-2221680 Msa1044050:intron 25.0%
! AGGGTACATCATAAAATATA+TGG + chr7_2:2221727-2221746 Msa1044050:intron 25.0%
! GGGTACATCATAAAATATAT+GGG + chr7_2:2221728-2221747 Msa1044050:intron 25.0%
! GGTACATCATAAAATATATG+GGG + chr7_2:2221729-2221748 Msa1044050:intron 25.0%
! GTACATCATAAAATATATGG+GGG + chr7_2:2221730-2221749 Msa1044050:intron 25.0%
!! TAGTATCTCCTAATTCATTT+TGG + chr7_2:2221868-2221887 Msa1044050:intron 25.0%
!! AGTATCTCCTAATTCATTTT+GGG + chr7_2:2221869-2221888 Msa1044050:intron 25.0%
! TTTAATAACAACACAATCAC+TGG - chr7_2:2222098-2222117 None:intergenic 25.0%
! CGTACTAATCTTATTCAAAA+GGG - chr7_2:2222545-2222564 None:intergenic 25.0%
! ATAAGATATGGAACATGATT+TGG - chr7_2:2222634-2222653 None:intergenic 25.0%
! AAATCATGTTCCATATCTTA+TGG + chr7_2:2222633-2222652 Msa1044050:intron 25.0%
! AATCATGTTCCATATCTTAT+GGG + chr7_2:2222634-2222653 Msa1044050:intron 25.0%
!!! TTTTAAAATTGGGCTATAGA+TGG - chr7_2:2222994-2223013 None:intergenic 25.0%
!! ATCTATAGCCCAATTTTAAA+AGG + chr7_2:2222993-2223012 Msa1044050:intron 25.0%
!!! TCTCAGAACCTTTTAAAATT+GGG - chr7_2:2223004-2223023 None:intergenic 25.0%
!!! TTCTCAGAACCTTTTAAAAT+TGG - chr7_2:2223005-2223024 None:intergenic 25.0%
! CTTACTATCCATAAATCTAT+GGG - chr7_2:2223214-2223233 None:intergenic 25.0%
! ACTTACTATCCATAAATCTA+TGG - chr7_2:2223215-2223234 None:intergenic 25.0%
!! ATGATGAATTCATTTTACTG+GGG - chr7_2:2223286-2223305 None:intergenic 25.0%
!! GAATGATGAATTCATTTTAC+TGG - chr7_2:2223288-2223307 None:intergenic 25.0%
! TAGAATATGGAAAAAATGTC+AGG - chr7_2:2223437-2223456 None:intergenic 25.0%
!! GACTATCATGTTCTTTTTAA+TGG - chr7_2:2223907-2223926 None:intergenic 25.0%
!! TCTGAAACTTGATATTTCAA+AGG - chr7_2:2224031-2224050 None:intergenic 25.0%
! AAAATAGATAGTTCAATCCA+TGG + chr7_2:2224929-2224948 Msa1044050:intron 25.0%
!! CTAAAAAGATTTTATGTCCA+TGG - chr7_2:2224949-2224968 None:intergenic 25.0%
!!! GACATAAAATCTTTTTAGCT+TGG + chr7_2:2224951-2224970 Msa1044050:intron 25.0%
! AAATTAATAATCAAGGTGAG+TGG - chr7_2:2224994-2225013 None:intergenic 25.0%
! ACGTCTCAAATTAATAATCA+AGG - chr7_2:2225001-2225020 None:intergenic 25.0%
! AAAAAATTGTTAGGCCAAAA+TGG - chr7_2:2225198-2225217 None:intergenic 25.0%
!! TTTAAGATTTCCTTTCTTTC+AGG - chr7_2:2225342-2225361 None:intergenic 25.0%
! ACATCTTAGATCAAAATTGT+TGG - chr7_2:2225445-2225464 None:intergenic 25.0%
! AAAGTGAATTATCAAATCAG+CGG - chr7_2:2225567-2225586 None:intergenic 25.0%
!! ATTATCATCTGGAATTAGTT+GGG - chr7_2:2225706-2225725 None:intergenic 25.0%
! TAGTTGATTGGATATTTGAA+GGG - chr7_2:2225921-2225940 None:intergenic 25.0%
! ATAGTTGATTGGATATTTGA+AGG - chr7_2:2225922-2225941 None:intergenic 25.0%
! AAATCTACAGTAAATAATGG+TGG + chr7_2:2226016-2226035 Msa1044050:intron 25.0%
! TTTATTTACCGACATTACAT+TGG + chr7_2:2226174-2226193 Msa1044050:intron 25.0%
! TCGATGATTAATCTATGATA+GGG - chr7_2:2226305-2226324 None:intergenic 25.0%
! CAATAACACAATTACCAATT+AGG + chr7_2:2226352-2226371 Msa1044050:intron 25.0%
!! TTGAGAGAATATTTTGCTTT+AGG + chr7_2:2226399-2226418 Msa1044050:intron 25.0%
!! CTTTTTATGTTATGCTTAAC+CGG + chr7_2:2226648-2226667 Msa1044050:intron 25.0%
!! ATTAACTTGAAGCTTGATTA+TGG - chr7_2:2226772-2226791 None:intergenic 25.0%
! TATGTATGTATATATAAGGC+AGG - chr7_2:2227259-2227278 None:intergenic 25.0%
! TACATACATAATATTGGACA+AGG + chr7_2:2227269-2227288 Msa1044050:three_prime_UTR 25.0%
! AACATACAATACATGAAATG+TGG - chr7_2:2227342-2227361 None:intergenic 25.0%
AGTTGGATAGAGGATTATTT+GGG - chr7_2:2220769-2220788 None:intergenic 30.0%
AAGTTGGATAGAGGATTATT+TGG - chr7_2:2220770-2220789 None:intergenic 30.0%
AAGAAGAAGTGAGTTTAAGT+TGG - chr7_2:2220786-2220805 None:intergenic 30.0%
ATTGAGATGTTTGTTCTTAG+AGG - chr7_2:2220892-2220911 None:intergenic 30.0%
!!! ACATGTGTTTTTGATGATGT+TGG - chr7_2:2220916-2220935 None:intergenic 30.0%
ACATCATCAAAAACACATGT+TGG + chr7_2:2220916-2220935 Msa1044050:CDS 30.0%
!! TGTTGGTTTGAATCAAAAAC+AGG + chr7_2:2220933-2220952 Msa1044050:CDS 30.0%
! AGAAGATACTTGATAACATG+TGG + chr7_2:2221012-2221031 Msa1044050:CDS 30.0%
TTTGGATGATTACCATTCTT+TGG + chr7_2:2221203-2221222 Msa1044050:CDS 30.0%
! AGATCAAAATCATTAGCTCT+TGG - chr7_2:2221270-2221289 None:intergenic 30.0%
!!! TAATCATGTTACTGGTCTTT+TGG + chr7_2:2221347-2221366 Msa1044050:CDS 30.0%
TATTAAACCACCCAAAATCT+TGG + chr7_2:2221383-2221402 Msa1044050:CDS 30.0%
CCATCTGATTATCAATGAAA+TGG - chr7_2:2221697-2221716 None:intergenic 30.0%
! CCATTTCATTGATAATCAGA+TGG + chr7_2:2221694-2221713 Msa1044050:intron 30.0%
AATCAGATGGTACAAATGAT+AGG + chr7_2:2221707-2221726 Msa1044050:intron 30.0%
ATCAGATGGTACAAATGATA+GGG + chr7_2:2221708-2221727 Msa1044050:intron 30.0%
TTATTGTTAGTTATGTCAGG+AGG - chr7_2:2221809-2221828 None:intergenic 30.0%
AGATACTATTAGTAGATGTC+AGG - chr7_2:2221856-2221875 None:intergenic 30.0%
! GTATCTCCTAATTCATTTTG+GGG + chr7_2:2221870-2221889 Msa1044050:intron 30.0%
TCAATTCCCCAAAATGAATT+AGG - chr7_2:2221879-2221898 None:intergenic 30.0%
CAAAAGATTCTCTTAATGAG+TGG - chr7_2:2222226-2222245 None:intergenic 30.0%
TTGTGTTTCTTGTGATGATA+TGG - chr7_2:2222504-2222523 None:intergenic 30.0%
GCGTACTAATCTTATTCAAA+AGG - chr7_2:2222546-2222565 None:intergenic 30.0%
ATCATGTTCCATATCTTATG+GGG + chr7_2:2222635-2222654 Msa1044050:intron 30.0%
AATAAATTATGGATCACAGC+AGG + chr7_2:2222821-2222840 Msa1044050:intron 30.0%
!! CGTTCATGATTTGTTAAATC+CGG - chr7_2:2222864-2222883 None:intergenic 30.0%
CGGATTTAACAAATCATGAA+CGG + chr7_2:2222862-2222881 Msa1044050:intron 30.0%
AAGCTAAATATTTCCCAAGA+CGG - chr7_2:2223087-2223106 None:intergenic 30.0%
!! TTGGGAAATATTTAGCTTTG+AGG + chr7_2:2223089-2223108 Msa1044050:intron 30.0%
TAGCATAAATTGGATGAGAT+GGG - chr7_2:2223242-2223261 None:intergenic 30.0%
! TAACAAGGAACATTGGTAAT+GGG - chr7_2:2223525-2223544 None:intergenic 30.0%
ACATCCATATCTAACTGTTT+GGG - chr7_2:2223550-2223569 None:intergenic 30.0%
TACATCCATATCTAACTGTT+TGG - chr7_2:2223551-2223570 None:intergenic 30.0%
ATTGTGACTAAATGCTATAG+CGG + chr7_2:2223588-2223607 Msa1044050:intron 30.0%
CTCTATATTATATGTGCAGA+AGG - chr7_2:2223820-2223839 None:intergenic 30.0%
CTTCTGCACATATAATATAG+AGG + chr7_2:2223818-2223837 Msa1044050:intron 30.0%
GCACATATAATATAGAGGTA+AGG + chr7_2:2223823-2223842 Msa1044050:intron 30.0%
! CTTTTTAATGGTGATCGTAT+AGG - chr7_2:2223895-2223914 None:intergenic 30.0%
TAGAATTTCAAACGCAGATA+AGG + chr7_2:2224095-2224114 Msa1044050:intron 30.0%
TGAATTTATCTATAAGAGGG+CGG + chr7_2:2224169-2224188 Msa1044050:intron 30.0%
! AATATTAGTGTCGTTGAGAT+GGG + chr7_2:2224299-2224318 Msa1044050:intron 30.0%
! GGGATTCTATCAATTCTTTT+GGG - chr7_2:2224388-2224407 None:intergenic 30.0%
CAAAAGAATTGATAGAATCC+CGG + chr7_2:2224387-2224406 Msa1044050:intron 30.0%
AATCTTGAGAATCAAGATGT+GGG + chr7_2:2224746-2224765 Msa1044050:intron 30.0%
! TTTTTATGATTGTGTGGACA+AGG + chr7_2:2224825-2224844 Msa1044050:intron 30.0%
TCAATCTTCCTTAATGTATG+TGG + chr7_2:2224865-2224884 Msa1044050:intron 30.0%
! GAAATTTGCTTGGAAAATTC+AGG + chr7_2:2225099-2225118 Msa1044050:CDS 30.0%
CTTATGCAATTCTATAAGGT+TGG + chr7_2:2225155-2225174 Msa1044050:intron 30.0%
! TTTATGCTTCTCATCCATTT+TGG + chr7_2:2225181-2225200 Msa1044050:intron 30.0%
ACAAATATTTCAGAGAGACA+TGG + chr7_2:2225219-2225238 Msa1044050:intron 30.0%
CCAATATAAGCTTCAAAATC+AGG - chr7_2:2225298-2225317 None:intergenic 30.0%
!!! CCTGATTTTGAAGCTTATAT+TGG + chr7_2:2225295-2225314 Msa1044050:CDS 30.0%
TCTTAGATCAAAATTGTTGG+TGG - chr7_2:2225442-2225461 None:intergenic 30.0%
! CATTATCATCTGGAATTAGT+TGG - chr7_2:2225707-2225726 None:intergenic 30.0%
! CTAATTCCAGATGATAATGA+AGG + chr7_2:2225708-2225727 Msa1044050:CDS 30.0%
ATCTTTCCTTCATTATCATC+TGG - chr7_2:2225717-2225736 None:intergenic 30.0%
AAGGAAAGATATTAAGAGTG+AGG + chr7_2:2225727-2225746 Msa1044050:CDS 30.0%
! AACAAACTAGCTTGAATTTG+TGG - chr7_2:2225968-2225987 None:intergenic 30.0%
GAATCTCTTAAGCAATATCT+TGG + chr7_2:2226216-2226235 Msa1044050:intron 30.0%
TTAATCTATGATAGGGAACA+TGG - chr7_2:2226298-2226317 None:intergenic 30.0%
GTCGATGATTAATCTATGAT+AGG - chr7_2:2226306-2226325 None:intergenic 30.0%
AGATTAATCATCGACAAAGT+CGG + chr7_2:2226311-2226330 Msa1044050:intron 30.0%
ACTGGTTAAGGATATGAAAA+AGG + chr7_2:2226548-2226567 Msa1044050:intron 30.0%
CGGTTAAGCATAACATAAAA+AGG - chr7_2:2226650-2226669 None:intergenic 30.0%
AAGGAACAAAAACACAAGTT+TGG - chr7_2:2226884-2226903 None:intergenic 30.0%
TCTTATCTTCAAACCAACTA+TGG - chr7_2:2227167-2227186 None:intergenic 30.0%
!!! TGATTTTGGGATAGAATTCA+AGG - chr7_2:2227299-2227318 None:intergenic 30.0%
TAATATAGAGGAGAAAAAGC+AGG + chr7_2:2227417-2227436 Msa1044050:three_prime_UTR 30.0%
TTTGAACAATTTGTCATCAC+TGG + chr7_2:2227470-2227489 Msa1044050:three_prime_UTR 30.0%
! ATATTCATATGCATGGACTA+TGG - chr7_2:2227508-2227527 None:intergenic 30.0%
!! AGTGAGTTTAAGTTGGATAG+AGG - chr7_2:2220779-2220798 None:intergenic 35.0%
TTGTTCTCTCTTTCTCTCTA+AGG - chr7_2:2220824-2220843 None:intergenic 35.0%
! TCTTCTGTTGTTGCTCTTTT+TGG - chr7_2:2220977-2220996 None:intergenic 35.0%
! AGAAGACTCACAAGTGTTTT+TGG + chr7_2:2221105-2221124 Msa1044050:CDS 35.0%
TGATAAGTGTGTTTGAGTCA+GGG - chr7_2:2221161-2221180 None:intergenic 35.0%
ATCATCCAAACATATCACAG+TGG - chr7_2:2221193-2221212 None:intergenic 35.0%
TACCATTCTTTGGATAGAAC+TGG + chr7_2:2221213-2221232 Msa1044050:CDS 35.0%
TACCAGTTCTATCCAAAGAA+TGG - chr7_2:2221218-2221237 None:intergenic 35.0%
AGAACTGGTAGAAAAGAGAA+AGG + chr7_2:2221228-2221247 Msa1044050:CDS 35.0%
! CCTTCAATGACCAAGATTTT+GGG - chr7_2:2221396-2221415 None:intergenic 35.0%
! ACCTTCAATGACCAAGATTT+TGG - chr7_2:2221397-2221416 None:intergenic 35.0%
TCATAAAATATATGGGGGCT+AGG + chr7_2:2221735-2221754 Msa1044050:intron 35.0%
AACAACACAATCACTGGATA+TGG - chr7_2:2222092-2222111 None:intergenic 35.0%
GTACACAACAAGAAGTAACA+TGG - chr7_2:2222169-2222188 None:intergenic 35.0%
!! ATTCTTTGGAGCATTTGGAA+GGG - chr7_2:2222308-2222327 None:intergenic 35.0%
!! CTATGATTCTTTGGAGCATT+TGG - chr7_2:2222313-2222332 None:intergenic 35.0%
ATTATGTAACAAGCCTCTGA+TGG + chr7_2:2222403-2222422 Msa1044050:intron 35.0%
TTGAATAAGATTAGTACGCG+TGG + chr7_2:2222547-2222566 Msa1044050:intron 35.0%
TGAATAAGATTAGTACGCGT+GGG + chr7_2:2222548-2222567 Msa1044050:intron 35.0%
ATAAAGTTCGTGTCTTCCTA+TGG - chr7_2:2222595-2222614 None:intergenic 35.0%
ATGGCACTCAGATTAATGTA+TGG - chr7_2:2222961-2222980 None:intergenic 35.0%
TATAGATGGAAGATTGGAGA+TGG - chr7_2:2222980-2222999 None:intergenic 35.0%
AGCTAAATATTTCCCAAGAC+GGG - chr7_2:2223086-2223105 None:intergenic 35.0%
ACTATCCATAAATCTATGGG+CGG - chr7_2:2223211-2223230 None:intergenic 35.0%
AGCATAAATTGGATGAGATG+GGG - chr7_2:2223241-2223260 None:intergenic 35.0%
GTAGCATAAATTGGATGAGA+TGG - chr7_2:2223243-2223262 None:intergenic 35.0%
!! TACTGGGGCTCTAAAAAAAA+TGG - chr7_2:2223271-2223290 None:intergenic 35.0%
TATGGAAAAAATGTCAGGCT+TGG - chr7_2:2223432-2223451 None:intergenic 35.0%
!! ATTGGTAATGGGAACTACTT+AGG - chr7_2:2223514-2223533 None:intergenic 35.0%
GTAACAAGGAACATTGGTAA+TGG - chr7_2:2223526-2223545 None:intergenic 35.0%
TACTCCCAAACAGTTAGATA+TGG + chr7_2:2223543-2223562 Msa1044050:intron 35.0%
GAGGATATCCTTTAGACAAT+TGG + chr7_2:2223657-2223676 Msa1044050:intron 35.0%
AAATTGGAGCTATCTTCAAG+CGG - chr7_2:2223995-2224014 None:intergenic 35.0%
! AGGCTTTTGACAGTGTAAAT+TGG - chr7_2:2224011-2224030 None:intergenic 35.0%
AATATTGTCCTTGCTCCTAA+AGG - chr7_2:2224285-2224304 None:intergenic 35.0%
! CAATATTAGTGTCGTTGAGA+TGG + chr7_2:2224298-2224317 Msa1044050:intron 35.0%
!!! CAATTCTTTTGGGATGACAT+AGG - chr7_2:2224378-2224397 None:intergenic 35.0%
! CGGGATTCTATCAATTCTTT+TGG - chr7_2:2224389-2224408 None:intergenic 35.0%
ATTGATAGAATCCCGGATTA+AGG + chr7_2:2224394-2224413 Msa1044050:intron 35.0%
! TCACGAGAAATGATAATGAG+CGG - chr7_2:2224500-2224519 None:intergenic 35.0%
TTATCATTTCTCGTGACACA+AGG + chr7_2:2224504-2224523 Msa1044050:intron 35.0%
!! CTACTTTTCTGCCATATTTC+AGG - chr7_2:2224571-2224590 None:intergenic 35.0%
ATGAGAACTCATCTCATCTT+GGG + chr7_2:2224599-2224618 Msa1044050:intron 35.0%
GAATCTTGAGAATCAAGATG+TGG + chr7_2:2224745-2224764 Msa1044050:intron 35.0%
ATCTTGAGAATCAAGATGTG+GGG + chr7_2:2224747-2224766 Msa1044050:intron 35.0%
TTGTTGGTCCACATACATTA+AGG - chr7_2:2224876-2224895 None:intergenic 35.0%
CTACTTAGACATTAGCAATG+AGG + chr7_2:2225075-2225094 Msa1044050:CDS 35.0%
AATATTTCAGAGAGACATGG+CGG + chr7_2:2225222-2225241 Msa1044050:intron 35.0%
!! ACACAGTCTTGAAAGTATCA+AGG + chr7_2:2225252-2225271 Msa1044050:CDS 35.0%
ATTTCCTTTCTTTCAGGAGT+TGG - chr7_2:2225336-2225355 None:intergenic 35.0%
TCGTCTTTAGCAATTTACGA+CGG + chr7_2:2225382-2225401 Msa1044050:intron 35.0%
AATCGTTTGCGTCTATGTAT+CGG + chr7_2:2225512-2225531 Msa1044050:intron 35.0%
AGTATTTAACACCCTCTTTC+TGG - chr7_2:2225758-2225777 None:intergenic 35.0%
CGTCATCAAACAAGTAAACT+GGG - chr7_2:2225785-2225804 None:intergenic 35.0%
CCAGTTTACTTGTTTGATGA+CGG + chr7_2:2225783-2225802 Msa1044050:CDS 35.0%
ATGACGGTTCTACAATTTCA+TGG + chr7_2:2225799-2225818 Msa1044050:CDS 35.0%
ACAATTTCATGGATACCATG+TGG + chr7_2:2225810-2225829 Msa1044050:CDS 35.0%
AAACTTACATGCTCTTATCC+TGG + chr7_2:2225837-2225856 Msa1044050:CDS 35.0%
CCATAGGAAAATTTAATGCC+AGG - chr7_2:2225858-2225877 None:intergenic 35.0%
! CCTGGCATTAAATTTTCCTA+TGG + chr7_2:2225855-2225874 Msa1044050:CDS 35.0%
TCATTTCCTTTGTAAGTCTC+TGG - chr7_2:2225882-2225901 None:intergenic 35.0%
AGAGACTTACAAAGGAAATG+AGG + chr7_2:2225881-2225900 Msa1044050:CDS 35.0%
CTAAAGGAAATAGCTCAACT+TGG - chr7_2:2226125-2226144 None:intergenic 35.0%
!! TTGGATTTTAGCCATGTAGA+TGG + chr7_2:2226235-2226254 Msa1044050:intron 35.0%
!! TGGATTTTAGCCATGTAGAT+GGG + chr7_2:2226236-2226255 Msa1044050:intron 35.0%
! CCATATTTTTCCCATCTACA+TGG - chr7_2:2226249-2226268 None:intergenic 35.0%
CCATGTAGATGGGAAAAATA+TGG + chr7_2:2226246-2226265 Msa1044050:intron 35.0%
AACCTCTCTTCCAAATTCTA+TGG + chr7_2:2227070-2227089 Msa1044050:CDS 35.0%
AGTGACTTCTCCATAGAATT+TGG - chr7_2:2227083-2227102 None:intergenic 35.0%
TCTTCAAACCAACTATGGTT+TGG - chr7_2:2227162-2227181 None:intergenic 35.0%
!!! TTTTGGTTCTTAACTGTGCG+AGG - chr7_2:2220615-2220634 None:intergenic 40.0%
CAAAACAAAGGGAGTTTAGC+AGG - chr7_2:2220688-2220707 None:intergenic 40.0%
! TACTTGATAACATGTGGAGC+AGG + chr7_2:2221018-2221037 Msa1044050:CDS 40.0%
GACTCACAGACAATTGTGAT+TGG + chr7_2:2221042-2221061 Msa1044050:CDS 40.0%
!!! AGACTCACAAGTGTTTTTGG+AGG + chr7_2:2221108-2221127 Msa1044050:CDS 40.0%
CTGATAAGTGTGTTTGAGTC+AGG - chr7_2:2221162-2221181 None:intergenic 40.0%
CACAACCACTGTGATATGTT+TGG + chr7_2:2221185-2221204 Msa1044050:CDS 40.0%
TTGGGTGGTTTAATAAGCTC+AGG - chr7_2:2221378-2221397 None:intergenic 40.0%
! TCAATGACCAAGATTTTGGG+TGG - chr7_2:2221393-2221412 None:intergenic 40.0%
CCCAAAATCTTGGTCATTGA+AGG + chr7_2:2221393-2221412 Msa1044050:CDS 40.0%
TAGCGACGGAAATTTAGAGA+CGG + chr7_2:2221489-2221508 Msa1044050:intron 40.0%
ATCAAGACTGCTATTGCTCA+TGG - chr7_2:2221963-2221982 None:intergenic 40.0%
TTACACTTCACAGTTGAAGC+TGG + chr7_2:2222134-2222153 Msa1044050:intron 40.0%
GCTCGTTGAACAATGATTGA+TGG + chr7_2:2222245-2222264 Msa1044050:intron 40.0%
CGTTGAACAATGATTGATGG+CGG + chr7_2:2222248-2222267 Msa1044050:intron 40.0%
!! TTCTTTGGAGCATTTGGAAG+GGG - chr7_2:2222307-2222326 None:intergenic 40.0%
!! GATTCTTTGGAGCATTTGGA+AGG - chr7_2:2222309-2222328 None:intergenic 40.0%
! CTCTGGCTTCTATGATTCTT+TGG - chr7_2:2222322-2222341 None:intergenic 40.0%
TAGAAGCCAGAGATTGTTGT+TGG + chr7_2:2222330-2222349 Msa1044050:intron 40.0%
TGACCTCTTTGACAGGTTAT+CGG - chr7_2:2222357-2222376 None:intergenic 40.0%
TCCAAAAGCTTCCAGTTGTT+GGG - chr7_2:2222450-2222469 None:intergenic 40.0%
GAATAAGATTAGTACGCGTG+GGG + chr7_2:2222549-2222568 Msa1044050:intron 40.0%
AGGAAGACACGAACTTTATG+TGG + chr7_2:2222596-2222615 Msa1044050:intron 40.0%
! TGCTGATTGTAAATCTGCCT+CGG + chr7_2:2222661-2222680 Msa1044050:intron 40.0%
! GTTTGGAATTACTCTGTGGA+TGG - chr7_2:2222734-2222753 None:intergenic 40.0%
! TCGTGTTTGGAATTACTCTG+TGG - chr7_2:2222738-2222757 None:intergenic 40.0%
TAAATCCGGATCTGCTATCT+TGG - chr7_2:2222850-2222869 None:intergenic 40.0%
ACGGTAACATCTTCAGTGTT+AGG + chr7_2:2222881-2222900 Msa1044050:intron 40.0%
CGGTAACATCTTCAGTGTTA+GGG + chr7_2:2222882-2222901 Msa1044050:intron 40.0%
TTGGGCTATAGATGGAAGAT+TGG - chr7_2:2222986-2223005 None:intergenic 40.0%
ATAATCCAAGCTACACATGG+AGG - chr7_2:2223039-2223058 None:intergenic 40.0%
GACATAATCCAAGCTACACA+TGG - chr7_2:2223042-2223061 None:intergenic 40.0%
GATTTCTTGGAAGCCAACAT+CGG - chr7_2:2223064-2223083 None:intergenic 40.0%
TTTGAGGATACGAGTGAGTA+AGG + chr7_2:2223105-2223124 Msa1044050:intron 40.0%
CTATCTATGCTCGGTAAACA+AGG - chr7_2:2223157-2223176 None:intergenic 40.0%
CTTGTTTACCGAGCATAGAT+AGG + chr7_2:2223155-2223174 Msa1044050:intron 40.0%
GCTTTCAACCTATCTATGCT+CGG - chr7_2:2223166-2223185 None:intergenic 40.0%
GCATAAATTGGATGAGATGG+GGG - chr7_2:2223240-2223259 None:intergenic 40.0%
ATGGCACTCGTAGCATAAAT+TGG - chr7_2:2223252-2223271 None:intergenic 40.0%
TTCGATTTCTTCACAAAGCG+AGG + chr7_2:2223309-2223328 Msa1044050:intron 40.0%
ATTTCTTCACAAAGCGAGGA+GGG + chr7_2:2223313-2223332 Msa1044050:intron 40.0%
! TGCAAGATCTCTTTCTAGAG+CGG - chr7_2:2223407-2223426 None:intergenic 40.0%
TTGGGAGTAACAAGGAACAT+TGG - chr7_2:2223532-2223551 None:intergenic 40.0%
CTAACTGTTTGGGAGTAACA+AGG - chr7_2:2223540-2223559 None:intergenic 40.0%
AGCTGAAGCCAATTGTCTAA+AGG - chr7_2:2223668-2223687 None:intergenic 40.0%
CATCAGTCATCTTCTCTTTG+CGG - chr7_2:2223722-2223741 None:intergenic 40.0%
GCAAAGAGAAGATGACTGAT+GGG + chr7_2:2223721-2223740 Msa1044050:intron 40.0%
GAACGATCAGGTAAGATACA+TGG - chr7_2:2223772-2223791 None:intergenic 40.0%
GTATCTTACCTGATCGTTCA+TGG + chr7_2:2223773-2223792 Msa1044050:intron 40.0%
TTGAAACACCATGAACGATC+AGG - chr7_2:2223784-2223803 None:intergenic 40.0%
ATATAGAGGTAAGGCGACAA+AGG + chr7_2:2223832-2223851 Msa1044050:intron 40.0%
TATAGAGGTAAGGCGACAAA+GGG + chr7_2:2223833-2223852 Msa1044050:intron 40.0%
TCTGTGATCGTTGGATATCT+TGG - chr7_2:2223954-2223973 None:intergenic 40.0%
AAATGGGATTCTGTGATCGT+TGG - chr7_2:2223963-2223982 None:intergenic 40.0%
CAAGCGGTCATGAGTAAAAT+GGG - chr7_2:2223979-2223998 None:intergenic 40.0%
TCAAGCGGTCATGAGTAAAA+TGG - chr7_2:2223980-2223999 None:intergenic 40.0%
TGTAAGCGCAAAGGTAAAAC+AGG - chr7_2:2224063-2224082 None:intergenic 40.0%
TATATGAGGTGTAAGCGCAA+AGG - chr7_2:2224072-2224091 None:intergenic 40.0%
TTATCCATGATAGATCGAGC+TGG + chr7_2:2224120-2224139 Msa1044050:intron 40.0%
CGAAGATCCTTTATAGTCTC+CGG + chr7_2:2224252-2224271 Msa1044050:intron 40.0%
GAAGATCCTTTATAGTCTCC+GGG + chr7_2:2224253-2224272 Msa1044050:intron 40.0%
!!! TCTTTTGGGATGACATAGGT+GGG - chr7_2:2224374-2224393 None:intergenic 40.0%
!!! TTCTTTTGGGATGACATAGG+TGG - chr7_2:2224375-2224394 None:intergenic 40.0%
CATATTTCAGGCTGTTCAAG+GGG - chr7_2:2224559-2224578 None:intergenic 40.0%
CCATATTTCAGGCTGTTCAA+GGG - chr7_2:2224560-2224579 None:intergenic 40.0%
CATGAGAACTCATCTCATCT+TGG + chr7_2:2224598-2224617 Msa1044050:intron 40.0%
! TGAGCCAAACTCCATTTTGA+AGG + chr7_2:2224625-2224644 Msa1044050:intron 40.0%
TTCGCCTTCAAAATGGAGTT+TGG - chr7_2:2224632-2224651 None:intergenic 40.0%
AGCAAACTTCGCCTTCAAAA+TGG - chr7_2:2224639-2224658 None:intergenic 40.0%
ATTCTTTCATGCTCAAGCCT+CGG - chr7_2:2224685-2224704 None:intergenic 40.0%
GAGAATCATACCTACATGCA+TGG - chr7_2:2225027-2225046 None:intergenic 40.0%
! TTCTCGAGTCAGAGATCTTT+TGG + chr7_2:2225042-2225061 Msa1044050:CDS 40.0%
! GCAATGAGGTGAAATTTGCT+TGG + chr7_2:2225089-2225108 Msa1044050:CDS 40.0%
GATTCCAACTCCTGAAAGAA+AGG + chr7_2:2225329-2225348 Msa1044050:intron 40.0%
!! GCATCTGCATATTGCTTTTG+TGG - chr7_2:2225663-2225682 None:intergenic 40.0%
! TCATCTGGAATTAGTTGGGT+TGG - chr7_2:2225702-2225721 None:intergenic 40.0%
CCGTCATCAAACAAGTAAAC+TGG - chr7_2:2225786-2225805 None:intergenic 40.0%
TTTCATGGATACCATGTGGA+AGG + chr7_2:2225814-2225833 Msa1044050:CDS 40.0%
CATGTAAGTTTCCTTCCACA+TGG - chr7_2:2225828-2225847 None:intergenic 40.0%
TTTGTAAGTCTCTGGTCCAT+AGG - chr7_2:2225874-2225893 None:intergenic 40.0%
TATGGACCAGAGACTTACAA+AGG + chr7_2:2225873-2225892 Msa1044050:CDS 40.0%
CACTAGGACCAATGTAATGT+CGG - chr7_2:2226185-2226204 None:intergenic 40.0%
! GATTCGAGTTCAATTCCACT+AGG - chr7_2:2226201-2226220 None:intergenic 40.0%
TCTATGATAGGGAACATGGT+TGG - chr7_2:2226294-2226313 None:intergenic 40.0%
TAATCATCGACAAAGTCGGT+TGG + chr7_2:2226315-2226334 Msa1044050:intron 40.0%
!!! TTTTTTTGGGTCCTGCTAAC+CGG - chr7_2:2226687-2226706 None:intergenic 40.0%
! AGCAAATTCAATTCGACTCG+AGG + chr7_2:2226801-2226820 Msa1044050:intron 40.0%
ATAGGTGTCAGTTGTGGAAA+TGG + chr7_2:2226994-2227013 Msa1044050:intron 40.0%
CTCCATAGAATTTGGAAGAG+AGG - chr7_2:2227075-2227094 None:intergenic 40.0%
! ATTGGTCTAGCAGCTGATTC+AGG + chr7_2:2221060-2221079 Msa1044050:CDS 45.0%
GGTGGTTTAATAAGCTCAGG+AGG - chr7_2:2221375-2221394 None:intergenic 45.0%
! TTTTGAGCAAAGGCAGCACT+AGG + chr7_2:2221671-2221690 Msa1044050:intron 45.0%
TTCTAACAGCCCCAATGCTT+CGG + chr7_2:2221986-2222005 Msa1044050:intron 45.0%
! TCTTGTTGTGTACCCAAGAC+CGG + chr7_2:2222176-2222195 Msa1044050:intron 45.0%
! TATGCAAACAGCAAGGCATC+CGG - chr7_2:2222198-2222217 None:intergenic 45.0%
GGAGACTTATGCAAACAGCA+AGG - chr7_2:2222205-2222224 None:intergenic 45.0%
ATCGGACCAACAACAATCTC+TGG - chr7_2:2222339-2222358 None:intergenic 45.0%
TGCTTTCTGACCTCTTTGAC+AGG - chr7_2:2222364-2222383 None:intergenic 45.0%
AAAGAGGTCAGAAAGCAGTG+TGG + chr7_2:2222367-2222386 Msa1044050:intron 45.0%
CTGCACTAATTCCCAACAAC+TGG + chr7_2:2222436-2222455 Msa1044050:intron 45.0%
! TCCCAACAACTGGAAGCTTT+TGG + chr7_2:2222446-2222465 Msa1044050:intron 45.0%
GTCCAAAAGCTTCCAGTTGT+TGG - chr7_2:2222451-2222470 None:intergenic 45.0%
AAGTTCGTGTCTTCCTATGG+CGG - chr7_2:2222592-2222611 None:intergenic 45.0%
CAGCAGAACCCCATAAGATA+TGG - chr7_2:2222646-2222665 None:intergenic 45.0%
ATCTCTCAGATGCTCGTGTT+TGG - chr7_2:2222751-2222770 None:intergenic 45.0%
GGATTCCAAGATAGCAGATC+CGG + chr7_2:2222842-2222861 Msa1044050:intron 45.0%
ACATCTTCAGTGTTAGGGAG+CGG + chr7_2:2222887-2222906 Msa1044050:intron 45.0%
TTAATGTATGGACAGCGCCT+TGG - chr7_2:2222949-2222968 None:intergenic 45.0%
GCTTGGATTATGTCCGATGT+TGG + chr7_2:2223048-2223067 Msa1044050:intron 45.0%
CTTCCAAGAAATCCCGTCTT+GGG + chr7_2:2223071-2223090 Msa1044050:intron 45.0%
TTTCCCAAGACGGGATTTCT+TGG - chr7_2:2223077-2223096 None:intergenic 45.0%
ATACGAGTGAGTAAGGAGCT+AGG + chr7_2:2223112-2223131 Msa1044050:intron 45.0%
TACGAGTGAGTAAGGAGCTA+GGG + chr7_2:2223113-2223132 Msa1044050:intron 45.0%
! GTAAGGAGCTAGGGTCTTTT+AGG + chr7_2:2223122-2223141 Msa1044050:intron 45.0%
CTATGCTCGGTAAACAAGGA+TGG - chr7_2:2223153-2223172 None:intergenic 45.0%
CATAAATCTATGGGCGGTCT+AGG - chr7_2:2223205-2223224 None:intergenic 45.0%
CTAGACCGCCCATAGATTTA+TGG + chr7_2:2223203-2223222 Msa1044050:intron 45.0%
GATTTCTTCACAAAGCGAGG+AGG + chr7_2:2223312-2223331 Msa1044050:intron 45.0%
AAGGAACGCACCCATACAAT+AGG + chr7_2:2223339-2223358 Msa1044050:intron 45.0%
AACGCACCCATACAATAGGA+GGG + chr7_2:2223343-2223362 Msa1044050:intron 45.0%
ACCCATACAATAGGAGGGAA+TGG + chr7_2:2223348-2223367 Msa1044050:intron 45.0%
GCCATTCCCTCCTATTGTAT+GGG - chr7_2:2223352-2223371 None:intergenic 45.0%
ACTCATCAAATCCGTTGCTC+AGG - chr7_2:2223374-2223393 None:intergenic 45.0%
!! TCTTTCTAGAGCGGGAAAAG+AGG - chr7_2:2223398-2223417 None:intergenic 45.0%
!! GCAAGATCTCTTTCTAGAGC+GGG - chr7_2:2223406-2223425 None:intergenic 45.0%
TTACTTCGACCGACCAATGA+TGG + chr7_2:2223484-2223503 Msa1044050:intron 45.0%
TACTTCGACCGACCAATGAT+GGG + chr7_2:2223485-2223504 Msa1044050:intron 45.0%
! AGCGGACTTACCGAAATTCA+AGG + chr7_2:2223606-2223625 Msa1044050:intron 45.0%
CTCAATTATGAAGCCGCATC+CGG - chr7_2:2223637-2223656 None:intergenic 45.0%
ATGCGGCTTCATAATTGAGG+AGG + chr7_2:2223638-2223657 Msa1044050:intron 45.0%
CGCAAAGAGAAGATGACTGA+TGG + chr7_2:2223720-2223739 Msa1044050:intron 45.0%
AAGAGAAGATGACTGATGGG+AGG + chr7_2:2223724-2223743 Msa1044050:intron 45.0%
GGTGTTTCAACAAAGCTGAG+AGG + chr7_2:2223794-2223813 Msa1044050:intron 45.0%
AGACCTCTTGCTGGAGTAAT+AGG + chr7_2:2223868-2223887 Msa1044050:intron 45.0%
GACCTCTTGCTGGAGTAATA+GGG + chr7_2:2223869-2223888 Msa1044050:intron 45.0%
TGTTCCAGCTCGATCTATCA+TGG - chr7_2:2224127-2224146 None:intergenic 45.0%
GATAGATCGAGCTGGAACAA+AGG + chr7_2:2224128-2224147 Msa1044050:intron 45.0%
TATCTATAAGAGGGCGGAGA+CGG + chr7_2:2224175-2224194 Msa1044050:intron 45.0%
! TTAGTGTCGTTGAGATGGGA+TGG + chr7_2:2224303-2224322 Msa1044050:intron 45.0%
! TAGTGTCGTTGAGATGGGAT+GGG + chr7_2:2224304-2224323 Msa1044050:intron 45.0%
!!! CTTTTGGGATGACATAGGTG+GGG - chr7_2:2224373-2224392 None:intergenic 45.0%
GGATTCGAGATGTAACAGGT+TGG + chr7_2:2224529-2224548 Msa1044050:intron 45.0%
! TTCGAGATGTAACAGGTTGG+TGG + chr7_2:2224532-2224551 Msa1044050:intron 45.0%
CCCTTGAACAGCCTGAAATA+TGG + chr7_2:2224557-2224576 Msa1044050:intron 45.0%
GCCATATTTCAGGCTGTTCA+AGG - chr7_2:2224561-2224580 None:intergenic 45.0%
! GAGACGTTTTCCATGCATGT+AGG + chr7_2:2225014-2225033 Msa1044050:intron 45.0%
! TCAAGGCTAGCATTGAAGCA+AGG + chr7_2:2225269-2225288 Msa1044050:CDS 45.0%
! AGTGAGGTTGATCCAGAAAG+AGG + chr7_2:2225743-2225762 Msa1044050:CDS 45.0%
! GTGAGGTTGATCCAGAAAGA+GGG + chr7_2:2225744-2225763 Msa1044050:CDS 45.0%
CGACATTACATTGGTCCTAG+TGG + chr7_2:2226183-2226202 Msa1044050:intron 45.0%
GTTGAAGACTCCACCAAACT+TGG + chr7_2:2226268-2226287 Msa1044050:intron 45.0%
GAGCTTGAAGTAGCCCTAAT+TGG - chr7_2:2226369-2226388 None:intergenic 45.0%
TGTGCAATAGGTGTCAGTTG+TGG + chr7_2:2226988-2227007 Msa1044050:intron 45.0%
GTGTCAGTTGTGGAAATGGA+TGG + chr7_2:2226998-2227017 Msa1044050:CDS 45.0%
TGGAAGAGAGGTTGCTTAAG+TGG - chr7_2:2227063-2227082 None:intergenic 45.0%
!! TTGAAGCATGCTGATTTCCC+TGG + chr7_2:2227112-2227131 Msa1044050:CDS 45.0%
GATTTCCCTGGTAGCAACAA+TGG + chr7_2:2227124-2227143 Msa1044050:CDS 45.0%
CTGTTCCATTGTTGCTACCA+GGG - chr7_2:2227132-2227151 None:intergenic 45.0%
GGTCTCTTCCAAACCATAGT+TGG + chr7_2:2227151-2227170 Msa1044050:CDS 45.0%
TTGAGCAGATAGTAGCAAGC+AGG + chr7_2:2227194-2227213 Msa1044050:CDS 45.0%
TGAGCAGATAGTAGCAAGCA+GGG + chr7_2:2227195-2227214 Msa1044050:CDS 45.0%
! TAAGCTTTAGCTGCTCCTAC+TGG - chr7_2:2227229-2227248 None:intergenic 45.0%
AGTAGGAGCAGCTAAAGCTT+AGG + chr7_2:2227228-2227247 Msa1044050:CDS 45.0%
!!! CTTTTATATTAATTTTTTTT+GGG - chr7_2:2226700-2226719 None:intergenic 5.0%
!!! ACTTTTATATTAATTTTTTT+TGG - chr7_2:2226701-2226720 None:intergenic 5.0%
! CTAGCAGCTGATTCAGGATG+TGG + chr7_2:2221066-2221085 Msa1044050:CDS 50.0%
! TCAGGGTTTCCACCTTTTGG+AGG - chr7_2:2221144-2221163 None:intergenic 50.0%
! GAGTCAGGGTTTCCACCTTT+TGG - chr7_2:2221147-2221166 None:intergenic 50.0%
!! CTACTGAAGCCGAAGCATTG+GGG - chr7_2:2221998-2222017 None:intergenic 50.0%
! CCTACTGAAGCCGAAGCATT+GGG - chr7_2:2221999-2222018 None:intergenic 50.0%
TCCTACTGAAGCCGAAGCAT+TGG - chr7_2:2222000-2222019 None:intergenic 50.0%
TGCTCAGGTCAGCTCTTGTT+AGG - chr7_2:2222053-2222072 None:intergenic 50.0%
TGCTGCATTCGTGATTGCTC+AGG - chr7_2:2222068-2222087 None:intergenic 50.0%
CACTTCACAGTTGAAGCTGG+TGG + chr7_2:2222137-2222156 Msa1044050:intron 50.0%
ATCAGAGCCTTCCCACAGTT+TGG + chr7_2:2222274-2222293 Msa1044050:intron 50.0%
CGTAACTCCAAACTGTGGGA+AGG - chr7_2:2222284-2222303 None:intergenic 50.0%
GGTCCGATAACCTGTCAAAG+AGG + chr7_2:2222351-2222370 Msa1044050:intron 50.0%
CAGATAGACAGCACCATCAG+AGG - chr7_2:2222419-2222438 None:intergenic 50.0%
GAAACACAAGCGTCTGTGCA+AGG + chr7_2:2222515-2222534 Msa1044050:intron 50.0%
TAAGATTAGTACGCGTGGGG+AGG + chr7_2:2222552-2222571 Msa1044050:intron 50.0%
ATGTATGAGCAAGCCGCCAT+AGG + chr7_2:2222576-2222595 Msa1044050:intron 50.0%
AGCATCTGAGAGATTACGCG+CGG + chr7_2:2222757-2222776 Msa1044050:intron 50.0%
GGGAAGGGGAATATTCAGGA+TGG + chr7_2:2222778-2222797 Msa1044050:intron 50.0%
!! GCTACACATGGAGGAGCATT+TGG - chr7_2:2223030-2223049 None:intergenic 50.0%
ATGCTCCTCCATGTGTAGCT+TGG + chr7_2:2223031-2223050 Msa1044050:intron 50.0%
GCTTCCAAGAAATCCCGTCT+TGG + chr7_2:2223070-2223089 Msa1044050:intron 50.0%
CGGTCTAGGCTTTCGCAATA+TGG - chr7_2:2223191-2223210 None:intergenic 50.0%
CACAAAGCGAGGAGGGAATA+AGG + chr7_2:2223320-2223339 Msa1044050:intron 50.0%
GAACGCACCCATACAATAGG+AGG + chr7_2:2223342-2223361 Msa1044050:intron 50.0%
GGCCATTCCCTCCTATTGTA+TGG - chr7_2:2223353-2223372 None:intergenic 50.0%
TTAGGCCTCCCATCATTGGT+CGG - chr7_2:2223496-2223515 None:intergenic 50.0%
CTACTTAGGCCTCCCATCAT+TGG - chr7_2:2223500-2223519 None:intergenic 50.0%
ACCGAAATTCAAGGCCTGAC+CGG + chr7_2:2223615-2223634 Msa1044050:intron 50.0%
TCCGGTCAGGCCTTGAATTT+CGG - chr7_2:2223619-2223638 None:intergenic 50.0%
CGGATGCGGCTTCATAATTG+AGG + chr7_2:2223635-2223654 Msa1044050:intron 50.0%
! CCAGCAAGAGGTCTAAGACA+AGG - chr7_2:2223862-2223881 None:intergenic 50.0%
CCTTGTCTTAGACCTCTTGC+TGG + chr7_2:2223859-2223878 Msa1044050:intron 50.0%
CAAAGGTAAAACAGGCGAGG+TGG - chr7_2:2224055-2224074 None:intergenic 50.0%
CGATCACCCGGAGACTATAA+AGG - chr7_2:2224262-2224281 None:intergenic 50.0%
! TTTTTGCTGCAGCCTGTGCT+TGG - chr7_2:2224347-2224366 None:intergenic 50.0%
AATCCCGGATTAAGGCCATC+CGG + chr7_2:2224402-2224421 Msa1044050:intron 50.0%
ATGCACCCTGACAAATCACC+GGG - chr7_2:2224429-2224448 None:intergenic 50.0%
CATGCACCCTGACAAATCAC+CGG - chr7_2:2224430-2224449 None:intergenic 50.0%
CATTTCTCGTGACACAAGGC+TGG + chr7_2:2224508-2224527 Msa1044050:intron 50.0%
GGCTGGATTCGAGATGTAAC+AGG + chr7_2:2224525-2224544 Msa1044050:intron 50.0%
GACCAACAACATGCACACGT+GGG + chr7_2:2224887-2224906 Msa1044050:intron 50.0%
!! GGAAGCATCGTTGCAGATAC+TGG - chr7_2:2225546-2225565 None:intergenic 50.0%
! ACATGGTTGGCCAAGTTTGG+TGG - chr7_2:2226281-2226300 None:intergenic 50.0%
! GGAACATGGTTGGCCAAGTT+TGG - chr7_2:2226284-2226303 None:intergenic 50.0%
CATCGACAAAGTCGGTTGGT+AGG + chr7_2:2226319-2226338 Msa1044050:intron 50.0%
CATATCCTTAACCAGTGCCC+CGG - chr7_2:2226544-2226563 None:intergenic 50.0%
CCTGTTCCATTGTTGCTACC+AGG - chr7_2:2227133-2227152 None:intergenic 50.0%
CCTGGTAGCAACAATGGAAC+AGG + chr7_2:2227130-2227149 Msa1044050:CDS 50.0%
GGTGCAGCAGAACCTCCAAA+AGG + chr7_2:2221129-2221148 Msa1044050:CDS 55.0%
GCAGCAGAACCTCCAAAAGG+TGG + chr7_2:2221132-2221151 Msa1044050:CDS 55.0%
CCCAATGCTTCGGCTTCAGT+AGG + chr7_2:2221996-2222015 Msa1044050:intron 55.0%
TGCTTCGGCTTCAGTAGGAG+AGG + chr7_2:2222001-2222020 Msa1044050:intron 55.0%
TTCGGCTTCAGTAGGAGAGG+AGG + chr7_2:2222004-2222023 Msa1044050:intron 55.0%
! ACAGCAAGGCATCCGGTCTT+GGG - chr7_2:2222191-2222210 None:intergenic 55.0%
! AACAGCAAGGCATCCGGTCT+TGG - chr7_2:2222192-2222211 None:intergenic 55.0%
GGGGCGTAACTCCAAACTGT+GGG - chr7_2:2222288-2222307 None:intergenic 55.0%
! AGGGGCGTAACTCCAAACTG+TGG - chr7_2:2222289-2222308 None:intergenic 55.0%
ATGCATGTCTCTTGCAGCCG+AGG - chr7_2:2222681-2222700 None:intergenic 55.0%
GCATCTGAGAGATTACGCGC+GGG + chr7_2:2222758-2222777 Msa1044050:intron 55.0%
TGAGAGATTACGCGCGGGAA+GGG + chr7_2:2222763-2222782 Msa1044050:intron 55.0%
TCAGGATGGCAGCAGCTTCT+TGG + chr7_2:2222792-2222811 Msa1044050:intron 55.0%
TCTTCAGTGTTAGGGAGCGG+TGG + chr7_2:2222890-2222909 Msa1044050:intron 55.0%
! GGTGTGGATGGTTTGAGACC+CGG + chr7_2:2222911-2222930 Msa1044050:intron 55.0%
CCTTGGATTCGAACTCTGCC+GGG - chr7_2:2222932-2222951 None:intergenic 55.0%
GCCTTGGATTCGAACTCTGC+CGG - chr7_2:2222933-2222952 None:intergenic 55.0%
! TTCGACCGACCAATGATGGG+AGG + chr7_2:2223488-2223507 Msa1044050:intron 55.0%
ATTCAAGGCCTGACCGGATG+CGG + chr7_2:2223621-2223640 Msa1044050:intron 55.0%
TTATGAAGCCGCATCCGGTC+AGG - chr7_2:2223632-2223651 None:intergenic 55.0%
GGCCCTATTACTCCAGCAAG+AGG - chr7_2:2223874-2223893 None:intergenic 55.0%
GCGCAAAGGTAAAACAGGCG+AGG - chr7_2:2224058-2224077 None:intergenic 55.0%
! GGAACAAAGGCAGCTTGCTC+CGG + chr7_2:2224141-2224160 Msa1044050:intron 55.0%
TATAAGAGGGCGGAGACGGT+TGG + chr7_2:2224179-2224198 Msa1044050:intron 55.0%
TGCTCCTAAAGGCGATCACC+CGG - chr7_2:2224274-2224293 None:intergenic 55.0%
! GGTGATCGCCTTTAGGAGCA+AGG + chr7_2:2224274-2224293 Msa1044050:intron 55.0%
GCCTGTTTCCAACCAAGCAC+AGG + chr7_2:2224332-2224351 Msa1044050:intron 55.0%
GCCTGTGCTTGGTTGGAAAC+AGG - chr7_2:2224336-2224355 None:intergenic 55.0%
GGACCAACAACATGCACACG+TGG + chr7_2:2224886-2224905 Msa1044050:intron 55.0%
GACCCACGTGTGCATGTTGT+TGG - chr7_2:2224892-2224911 None:intergenic 55.0%
GATGTGTCTCACGACGCATG+TGG + chr7_2:2225460-2225479 Msa1044050:intron 55.0%
GAAATGCTAACCGCTGCCTC+CGG + chr7_2:2226522-2226541 Msa1044050:intron 55.0%
AAATGCTAACCGCTGCCTCC+GGG + chr7_2:2226523-2226542 Msa1044050:intron 55.0%
GTTATGCTTAACCGGTGCCC+CGG + chr7_2:2226656-2226675 Msa1044050:intron 55.0%
TTATGCTTAACCGGTGCCCC+GGG + chr7_2:2226657-2226676 Msa1044050:intron 55.0%
CTGAGAGATTACGCGCGGGA+AGG + chr7_2:2222762-2222781 Msa1044050:intron 60.0%
GAGAGATTACGCGCGGGAAG+GGG + chr7_2:2222764-2222783 Msa1044050:intron 60.0%
GCGCGGGAAGGGGAATATTC+AGG + chr7_2:2222774-2222793 Msa1044050:intron 60.0%
AGTGTTAGGGAGCGGTGGTG+TGG + chr7_2:2222895-2222914 Msa1044050:intron 60.0%
TTAGGGAGCGGTGGTGTGGA+TGG + chr7_2:2222899-2222918 Msa1044050:intron 60.0%
CCCGGCAGAGTTCGAATCCA+AGG + chr7_2:2222929-2222948 Msa1044050:intron 60.0%
GGAGGGAATGGCCTGAGCAA+CGG + chr7_2:2223360-2223379 Msa1044050:intron 60.0%
GACTGATGGGAGGAGCCGTA+CGG + chr7_2:2223734-2223753 Msa1044050:intron 60.0%
TGGCGTGCGTGTATGCCGTA+CGG - chr7_2:2223752-2223771 None:intergenic 60.0%
GTCTCCGGGTGATCGCCTTT+AGG + chr7_2:2224267-2224286 Msa1044050:intron 60.0%
TGCTGCAGCCTGTGCTTGGT+TGG - chr7_2:2224343-2224362 None:intergenic 60.0%
! GGTCCGGATGGCCTTAATCC+GGG - chr7_2:2224408-2224427 None:intergenic 60.0%
! GGGTCCGGATGGCCTTAATC+CGG - chr7_2:2224409-2224428 None:intergenic 60.0%
GGATTAAGGCCATCCGGACC+CGG + chr7_2:2224408-2224427 Msa1044050:intron 60.0%
GACAAATCACCGGGTCCGGA+TGG - chr7_2:2224420-2224439 None:intergenic 60.0%
! TCCGGACCCGGTGATTTGTC+AGG + chr7_2:2224420-2224439 Msa1044050:intron 60.0%
CCCTGACAAATCACCGGGTC+CGG - chr7_2:2224424-2224443 None:intergenic 60.0%
! CCGGACCCGGTGATTTGTCA+GGG + chr7_2:2224421-2224440 Msa1044050:intron 60.0%
GTTTCTCTTGCGACGTGCCG+AGG + chr7_2:2224665-2224684 Msa1044050:intron 60.0%
! CAGAGAGACATGGCGGAACG+TGG + chr7_2:2225229-2225248 Msa1044050:intron 60.0%
AATGCTAACCGCTGCCTCCG+GGG + chr7_2:2226524-2226543 Msa1044050:intron 60.0%
ATCCTTAACCAGTGCCCCGG+AGG - chr7_2:2226541-2226560 None:intergenic 60.0%
TATGCTTAACCGGTGCCCCG+GGG + chr7_2:2226658-2226677 Msa1044050:intron 60.0%
AGCAGGGCTGAGACTCCAGT+AGG + chr7_2:2227211-2227230 Msa1044050:CDS 60.0%
!! TGCCTCCGGGGCACTGGTTA+AGG + chr7_2:2226536-2226555 Msa1044050:intron 65.0%
TCCTGCTAACCGGTGTCCCC+GGG - chr7_2:2226677-2226696 None:intergenic 65.0%
GTCCTGCTAACCGGTGTCCC+CGG - chr7_2:2226678-2226697 None:intergenic 65.0%
AACCAGTGCCCCGGAGGCAG+CGG - chr7_2:2226535-2226554 None:intergenic 70.0%
CCTGCTAACCGGTGTCCCCG+GGG - chr7_2:2226676-2226695 None:intergenic 70.0%
AACCGCTGCCTCCGGGGCAC+TGG + chr7_2:2226530-2226549 Msa1044050:intron 75.0%
AACCGGTGCCCCGGGGACAC+CGG + chr7_2:2226665-2226684 Msa1044050:intron 75.0%
AACCGGTGTCCCCGGGGCAC+CGG - chr7_2:2226670-2226689 None:intergenic 75.0%
! CCCCGGGGACACCGGTTAGC+AGG + chr7_2:2226673-2226692 Msa1044050:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 2220598 2227543 2220598 ID=Msa1044050;Name=Msa1044050
chr7_2 mRNA 2220598 2227543 2220598 ID=Msa1044050-mRNA-1;Parent=Msa1044050;Name=Msa1044050-mRNA-1;_AED=0.17;_eAED=0.17;_QI=261|1|1|1|1|1|5|294|411
chr7_2 exon 2220598 2221427 2220598 ID=Msa1044050-mRNA-1:exon:536;Parent=Msa1044050-mRNA-1
chr7_2 exon 2225036 2225120 2225036 ID=Msa1044050-mRNA-1:exon:537;Parent=Msa1044050-mRNA-1
chr7_2 exon 2225232 2225316 2225232 ID=Msa1044050-mRNA-1:exon:538;Parent=Msa1044050-mRNA-1
chr7_2 exon 2225658 2225902 2225658 ID=Msa1044050-mRNA-1:exon:539;Parent=Msa1044050-mRNA-1
chr7_2 exon 2226998 2227543 2226998 ID=Msa1044050-mRNA-1:exon:540;Parent=Msa1044050-mRNA-1
chr7_2 five_prime_UTR 2220598 2220858 2220598 ID=Msa1044050-mRNA-1:five_prime_utr;Parent=Msa1044050-mRNA-1
chr7_2 CDS 2220859 2221427 2220859 ID=Msa1044050-mRNA-1:cds;Parent=Msa1044050-mRNA-1
chr7_2 CDS 2225036 2225120 2225036 ID=Msa1044050-mRNA-1:cds;Parent=Msa1044050-mRNA-1
chr7_2 CDS 2225232 2225316 2225232 ID=Msa1044050-mRNA-1:cds;Parent=Msa1044050-mRNA-1
chr7_2 CDS 2225658 2225902 2225658 ID=Msa1044050-mRNA-1:cds;Parent=Msa1044050-mRNA-1
chr7_2 CDS 2226998 2227249 2226998 ID=Msa1044050-mRNA-1:cds;Parent=Msa1044050-mRNA-1
chr7_2 three_prime_UTR 2227250 2227543 2227250 ID=Msa1044050-mRNA-1:three_prime_utr;Parent=Msa1044050-mRNA-1
Gene Sequence

>Msa1044050

ATGGCAGCATGTACTGTCTACTCAACACAACCTCTAAGAACAAACATCTCAATTCCAACATCATCAAAAACACATGTTGGTTTGAATCAAAAACAGGTAGTGTTCTACACAACAACCAAAAAGAGCAACAACAGAAGAACTAACAGTAACAACAGAAGATACTTGATAACATGTGGAGCAGGTGACTCACAGACAATTGTGATTGGTCTAGCAGCTGATTCAGGATGTGGAAAAAGTACTTTCATGAGAAGACTCACAAGTGTTTTTGGAGGTGCAGCAGAACCTCCAAAAGGTGGAAACCCTGACTCAAACACACTTATCAGTGACACAACCACTGTGATATGTTTGGATGATTACCATTCTTTGGATAGAACTGGTAGAAAAGAGAAAGGTGTTACTGCACTTGATCCAAGAGCTAATGATTTTGATCTTATGTATGAACAAGTTAAAGCTATTAAAGAGGGTATTTCTGTTCAAAAACCTATTTATAATCATGTTACTGGTCTTTTGGATCCTCCTGAGCTTATTAAACCACCCAAAATCTTGGTCATTGAAGGTCTTCACCCAATGTATGATTCTCGAGTCAGAGATCTTTTGGACTTCAGTATCTACTTAGACATTAGCAATGAGGTGAAATTTGCTTGGAAAATTCAGAGAGACATGGCGGAACGTGGACACAGTCTTGAAAGTATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGAAGCTTATATTGATCCACAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACCCAACTAATTCCAGATGATAATGAAGGAAAGATATTAAGAGTGAGGTTGATCCAGAAAGAGGGTGTTAAATACTTTAGCCCAGTTTACTTGTTTGATGACGGTTCTACAATTTCATGGATACCATGTGGAAGGAAACTTACATGCTCTTATCCTGGCATTAAATTTTCCTATGGACCAGAGACTTACAAAGGAAATGAGGTGTCAGTTGTGGAAATGGATGGACAATTTGACAGACTAGATGAACTAATATATGTTGAGAGCCACTTAAGCAACCTCTCTTCCAAATTCTATGGAGAAGTCACTCAACAAATGTTGAAGCATGCTGATTTCCCTGGTAGCAACAATGGAACAGGTCTCTTCCAAACCATAGTTGGTTTGAAGATAAGAGATTTATTTGAGCAGATAGTAGCAAGCAGGGCTGAGACTCCAGTAGGAGCAGCTAAAGCTTAG

Protein sequence

>Msa1044050

MAACTVYSTQPLRTNISIPTSSKTHVGLNQKQVVFYTTTKKSNNRRTNSNNRRYLITCGAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKEGISVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFSYGPETYKGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVASRAETPVGAAKA*