AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1380740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1380740 MtrunA17_Chr8g0361451 80.000 200 34 1 45 238 1 200 3.26e-112 326
Msa1380740 MtrunA17_Chr8g0361451 57.812 192 38 1 242 390 9 200 1.10e-67 213
Msa1380740 MtrunA17_Chr2g0318961 79.500 200 35 1 45 238 1 200 1.42e-110 322
Msa1380740 MtrunA17_Chr2g0318961 60.417 192 33 1 242 390 9 200 2.59e-71 222
Msa1380740 MtrunA17_Chr4g0048841 78.283 198 37 1 50 241 41 238 3.10e-107 315
Msa1380740 MtrunA17_Chr4g0048841 61.000 200 35 1 237 393 39 238 1.17e-73 229
Msa1380740 MtrunA17_Chr2g0280641 73.399 203 48 1 45 241 1 203 5.41e-101 298
Msa1380740 MtrunA17_Chr2g0280641 75.385 195 5 1 242 393 9 203 7.59e-94 280
Msa1380740 MtrunA17_Chr5g0429671 65.829 199 61 2 47 238 4 202 3.48e-89 268
Msa1380740 MtrunA17_Chr5g0429671 51.813 193 49 2 242 390 10 202 3.90e-60 193
Msa1380740 MtrunA17_Chr4g0034601 64.975 197 62 2 48 237 52 248 6.93e-83 253
Msa1380740 MtrunA17_Chr4g0034601 45.833 192 60 2 242 389 57 248 1.96e-46 159
Msa1380740 MtrunA17_Chr5g0403681 62.500 200 68 2 48 240 53 252 1.10e-80 248
Msa1380740 MtrunA17_Chr5g0403681 46.667 195 60 2 242 392 58 252 1.40e-47 162
Msa1380740 MtrunA17_Chr4g0048831 83.333 120 16 1 122 241 1 116 1.72e-65 204
Msa1380740 MtrunA17_Chr4g0048831 81.690 71 13 0 323 393 46 116 1.46e-33 121
Msa1380740 MtrunA17_Chr8g0361461 76.923 117 27 0 122 238 1 117 2.01e-59 188
Msa1380740 MtrunA17_Chr8g0361461 68.493 73 23 0 318 390 45 117 5.53e-26 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1380740 AT4G27270.1 78.607 201 37 1 45 239 1 201 8.68e-111 323
Msa1380740 AT4G27270.1 59.067 193 36 1 242 391 9 201 2.76e-71 222
Msa1380740 AT5G54500.1 78.218 202 38 1 45 240 1 202 8.65e-110 320
Msa1380740 AT5G54500.1 60.825 194 33 1 242 392 9 202 2.76e-72 225
Msa1380740 AT4G27270.3 77.368 190 37 1 56 239 1 190 3.15e-102 301
Msa1380740 AT4G27270.3 58.947 190 35 1 245 391 1 190 2.17e-69 217
Msa1380740 AT4G27270.2 77.368 190 37 1 56 239 1 190 3.15e-102 301
Msa1380740 AT4G27270.2 58.947 190 35 1 245 391 1 190 2.17e-69 217
Msa1380740 AT5G58800.1 64.322 199 64 2 47 238 4 202 3.13e-86 261
Msa1380740 AT5G58800.1 51.813 193 49 2 242 390 10 202 1.20e-58 190
Msa1380740 AT5G58800.2 64.322 199 64 2 47 238 4 202 3.13e-86 261
Msa1380740 AT5G58800.2 51.813 193 49 2 242 390 10 202 1.20e-58 190
Msa1380740 AT4G36750.1 62.944 197 66 2 48 237 74 270 1.51e-81 251
Msa1380740 AT4G36750.1 47.396 192 57 2 242 389 79 270 1.09e-50 171
Msa1380740 AT4G27270.4 80.000 150 24 1 96 239 1 150 9.27e-81 244
Msa1380740 AT4G27270.4 54.667 150 25 1 285 391 1 150 5.16e-46 155
Msa1380740 AT5G54500.2 75.309 162 34 1 45 200 1 162 1.36e-80 248
Msa1380740 AT5G54500.2 57.792 154 22 1 242 352 9 162 7.72e-50 168

Find 89 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTCATTTGCTGAAATAAT+TGG 0.177953 tig0020402:+37788 None:intergenic
ACCTCTTCTGGCAATATTTC+AGG 0.186131 tig0020402:+37848 None:intergenic
ATTTCTTCAGACAATATTTC+TGG 0.196797 tig0020402:+31195 None:intergenic
CCATATGGTTCAGGAACTTT+TGG 0.217112 tig0020402:-29430 Msa1380740:CDS
TACTCAATTCAAAGCATTTA+TGG 0.233806 tig0020402:-37711 Msa1380740:CDS
AGAAACCAAAAGGGCGTTCT+TGG 0.308627 tig0020402:+38264 None:intergenic
TCAGCTTCAGCAAGCTGTTT+AGG 0.310193 tig0020402:+31123 None:intergenic
ATAATTGGAACATCACTCTT+TGG 0.328363 tig0020402:+37803 None:intergenic
GTGCATTATATAAATGGAAT+TGG 0.330285 tig0020402:-38336 None:intergenic
CATCAGGGAAAATACTTTGC+TGG 0.334949 tig0020402:-29358 Msa1380740:CDS
GTACCTATTGGATACACATT+TGG 0.364946 tig0020402:-29493 Msa1380740:CDS
ACTCACCAAGAACGCCCTTT+TGG 0.367633 tig0020402:-38269 Msa1380740:CDS
GAGGTGCTTTCATCTTCCTT+AGG 0.379219 tig0020402:+31172 None:intergenic
TTTAGCTACTATTCTATGTA+TGG 0.386282 tig0020402:-38065 Msa1380740:intron
CATCAAGGGAAATACTTTGC+GGG 0.388451 tig0020402:-36870 Msa1380740:CDS
TGGTGCACACAGAAACTTGC+AGG 0.402973 tig0020402:-37671 Msa1380740:CDS
ATCTTCCCAAGAACCTCTTC+TGG 0.413268 tig0020402:+37836 None:intergenic
CAAGTTTCTGTGTGCACCAT+AGG 0.415808 tig0020402:+37675 None:intergenic
AAAGCATTTATGGATACAAC+TGG 0.420143 tig0020402:-37701 Msa1380740:CDS
TCCAACAAGATTTGGAATGA+TGG 0.421484 tig0020402:-37735 Msa1380740:intron
GACATCATTCCATATCTTGC+TGG 0.429420 tig0020402:+31081 None:intergenic
TATTGCCAGAAGAGGTTCTT+GGG 0.434381 tig0020402:-37841 Msa1380740:CDS
GGTGGATCACCATATGGTTC+AGG 0.438436 tig0020402:-29439 Msa1380740:CDS
GTGCCCGTTGGATACACATT+TGG 0.442396 tig0020402:-37005 Msa1380740:CDS
AGAACCTAGTGAGTTAGAAT+TGG 0.452588 tig0020402:-29392 Msa1380740:CDS
CTGTCTCTATAGAAACCAAA+AGG 0.458141 tig0020402:+38254 None:intergenic
GCACCAAATGTGTATCCAAT+AGG 0.462098 tig0020402:+29490 None:intergenic
TATTCTATGTATGGACATGT+TGG 0.462480 tig0020402:-38056 Msa1380740:CDS
AATGGAGTTGAATCCATAGA+AGG 0.462725 tig0020402:-38011 Msa1380740:CDS
CTAGCTGAAGAGATTCTAAA+GGG 0.480491 tig0020402:-31500 Msa1380740:CDS
TATGGTGCTGGAACTTATGC+AGG 0.483004 tig0020402:-36939 Msa1380740:CDS
CCAAAAGTTCCTGAACCATA+TGG 0.483267 tig0020402:+29430 None:intergenic
ATATTGCCAGAAGAGGTTCT+TGG 0.489085 tig0020402:-37842 Msa1380740:CDS
GCTAGCTGAAGAGATTCTAA+AGG 0.492200 tig0020402:-31501 Msa1380740:CDS
TTTAGTTACCATTCTGTGTA+CGG 0.493434 tig0020402:-31536 Msa1380740:intron
ATTGGATACACATTTGGTGC+TGG 0.493510 tig0020402:-29487 Msa1380740:CDS
GCATAAGTTCCAGCACCATA+TGG 0.494566 tig0020402:+36942 None:intergenic
TCATCAAGGGAAATACTTTG+CGG 0.497889 tig0020402:-36871 Msa1380740:CDS
AATGAGCTTCTTGAGGCTGA+TGG 0.504019 tig0020402:-37773 Msa1380740:CDS
GTGAAAGGTGGCTCACCATA+TGG 0.504157 tig0020402:-36957 Msa1380740:CDS
ACAGCCCACTGAATTAGAAC+TGG 0.505688 tig0020402:-36904 Msa1380740:CDS
GCACCAAATGTGTATCCAAC+GGG 0.505966 tig0020402:+37002 None:intergenic
ATGTCTGGAACTTCACTCCT+TGG 0.507106 tig0020402:+31150 None:intergenic
GTTGGATACACATTTGGTGC+TGG 0.509879 tig0020402:-36999 Msa1380740:CDS
AGCTGTTTAGGTGAAATGTC+TGG 0.522083 tig0020402:+31135 None:intergenic
GTGAAGGGTGGATCACCATA+TGG 0.524280 tig0020402:-29445 Msa1380740:CDS
ATTGGAACATCACTCTTTGG+AGG 0.524679 tig0020402:+37806 None:intergenic
ATTCTATGTATGGACATGTT+GGG 0.527530 tig0020402:-38055 Msa1380740:CDS
GTGCTGTAAAAGATGCCAGC+AGG 0.530472 tig0020402:+37644 None:intergenic
CTTCAAGTTACTAGCAGCAA+TGG 0.533135 tig0020402:-38210 Msa1380740:CDS
CAACATGTCCGTACACAGAA+TGG 0.533687 tig0020402:+31528 None:intergenic
TCTGGAACTTCACTCCTTGG+AGG 0.536604 tig0020402:+31153 None:intergenic
GCTGGAACTTATGCAGGGGA+TGG 0.539914 tig0020402:-36933 Msa1380740:CDS
GGTGGCTCACCATATGGTGC+TGG 0.541107 tig0020402:-36951 Msa1380740:CDS
GAATTGCAAAGAAGCTCAAA+GGG 0.547992 tig0020402:-36848 Msa1380740:CDS
AAACTTGCAGGAAAGCCTGC+TGG 0.549934 tig0020402:-37659 Msa1380740:CDS
AGTAGAAGCAAAACTCTGGC+AGG 0.554251 tig0020402:-31459 Msa1380740:intron
TGTAGAAGCAAAACTCTGGC+AGG 0.555434 tig0020402:-37988 Msa1380740:intron
TTCAGCAAATGAGCTTCTTG+AGG 0.559049 tig0020402:-37780 Msa1380740:CDS
TGGATACAACTGGAGACCTA+TGG 0.560259 tig0020402:-37691 Msa1380740:CDS
TTGAGCCAGTTCTAATTCAG+TGG 0.564705 tig0020402:+36899 None:intergenic
GGAATTGCAAAGAAGCTCAA+AGG 0.567048 tig0020402:-36849 Msa1380740:CDS
AAGGAGTAGAAGCAAAACTC+TGG 0.567226 tig0020402:-31463 Msa1380740:CDS
GAGATGGAAAAGGTGAAGGG+TGG 0.571043 tig0020402:-29457 Msa1380740:CDS
AAACAGCTTGCTGAAGCTGA+TGG 0.579655 tig0020402:-31120 Msa1380740:CDS
TGGAATGTTTGAGATAGAAA+AGG 0.585194 tig0020402:-36979 Msa1380740:CDS
TATTGTCTGAAGAAATCCTA+AGG 0.587507 tig0020402:-31188 Msa1380740:CDS
GCCTGAAATATTGCCAGAAG+AGG 0.587723 tig0020402:-37849 Msa1380740:CDS
TGAGCCAGTTCTAATTCAGT+GGG 0.588214 tig0020402:+36900 None:intergenic
TGAGCCAATTCTAACTCACT+AGG 0.588519 tig0020402:+29388 None:intergenic
TACAGCACTGCTTGTCAAGG+AGG 0.588851 tig0020402:-37629 Msa1380740:CDS
TGGTGCTGGAATGTTTGAGA+TGG 0.592919 tig0020402:-29473 Msa1380740:CDS
GTTTGAGATGGAAAAGGTGA+AGG 0.593131 tig0020402:-29461 Msa1380740:CDS
AGCACCAAATGTGTATCCAA+CGG 0.594733 tig0020402:+37001 None:intergenic
TGGAATGTTTGAGATGGAAA+AGG 0.598335 tig0020402:-29467 Msa1380740:CDS
GGAAGATGAAAGCACCTCCA+AGG 0.601210 tig0020402:-31167 Msa1380740:CDS
AGCACTGCTTGTCAAGGAGG+TGG 0.606846 tig0020402:-37626 Msa1380740:CDS
TTTGAGATAGAAAAGGTGAA+AGG 0.612381 tig0020402:-36972 Msa1380740:CDS
GGAATTGCAAAGAAGCTCAA+AGG 0.612793 tig0020402:-29337 Msa1380740:CDS
AAGGTGTAGAAGCAAAACTC+TGG 0.618036 tig0020402:-37992 Msa1380740:CDS
TGTCTCTATAGAAACCAAAA+GGG 0.625559 tig0020402:+38255 None:intergenic
ATGGTGCTGGAACTTATGCA+GGG 0.634036 tig0020402:-36938 Msa1380740:CDS
ATTACACAACTTGTTCACCA+TGG 0.638391 tig0020402:-37038 Msa1380740:CDS
AGCTGAAGAGATTCTAAAGG+GGG 0.639484 tig0020402:-31498 Msa1380740:CDS
ATTACTCAGCTTGTTCACCA+TGG 0.640802 tig0020402:-29526 Msa1380740:intron
GAGATAGAAAAGGTGAAAGG+TGG 0.645866 tig0020402:-36969 Msa1380740:CDS
TAGCTGAAGAGATTCTAAAG+GGG 0.681515 tig0020402:-31499 Msa1380740:CDS
TTTGAGATGGAAAAGGTGAA+GGG 0.701314 tig0020402:-29460 Msa1380740:CDS
TGGTGCTGGAACTTATGCAG+GGG 0.770860 tig0020402:-36937 Msa1380740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTATATACTATATGTAT+AGG - tig0020402:29777-29796 Msa1380740:intron 10.0%
!!! TTTTAGAATTCAATAATAAT+TGG - tig0020402:30124-30143 Msa1380740:intron 10.0%
!!! TAAATTAACTATTTTCAATT+TGG - tig0020402:30310-30329 Msa1380740:intron 10.0%
!!! TCAAAAAATTTAAGTTTTTT+AGG + tig0020402:32771-32790 None:intergenic 10.0%
!!! TAATCACTTAAATATTTTAT+TGG - tig0020402:34644-34663 Msa1380740:intron 10.0%
!!! TCTTTTTTTTTTTTTTTGTA+AGG - tig0020402:34707-34726 Msa1380740:intron 10.0%
!! ATATACATAAATATAAACTA+AGG + tig0020402:34874-34893 None:intergenic 10.0%
!!! TAATCACTTAAATATTTTAT+TGG - tig0020402:34644-34663 Msa1380740:intron 10.0%
!!! ATCTTTTTTTTTTTTTTGTA+AGG - tig0020402:35408-35427 Msa1380740:intron 10.0%
!! ATATACATAAATATAAACTA+AGG + tig0020402:34874-34893 None:intergenic 10.0%
!! ATTATAATATATATCATTAG+TGG + tig0020402:36420-36439 None:intergenic 10.0%
!! TTATTGAGAAAAAAAAATAA+AGG - tig0020402:37013-37032 Msa1380740:CDS 10.0%
!!! AATTAGATCATTTTTTTTTT+TGG - tig0020402:37360-37379 Msa1380740:intron 10.0%
!!! ATATAAATTTATTCTAAAAG+AGG - tig0020402:37872-37891 Msa1380740:intron 10.0%
!!! TATAAATTTATTCTAAAAGA+GGG - tig0020402:37873-37892 Msa1380740:intron 10.0%
!! CAAAAAATTAACATATTTAT+AGG - tig0020402:37963-37982 Msa1380740:intron 10.0%
!!! TATTGAATTCTAAAAACATT+TGG + tig0020402:30119-30138 None:intergenic 15.0%
!! TTGTAAAATCAGAAAATAAA+TGG + tig0020402:30571-30590 None:intergenic 15.0%
!!! AATATTTAGAATATGTTAAG+TGG + tig0020402:30865-30884 None:intergenic 15.0%
!!! TTTTAAACTTTCATTATCAA+AGG - tig0020402:31032-31051 Msa1380740:intron 15.0%
!! TTTAAACTTTCATTATCAAA+GGG - tig0020402:31033-31052 Msa1380740:intron 15.0%
!!! ATTTTTTATTTTTTTTGGGT+GGG + tig0020402:32057-32076 None:intergenic 15.0%
!!! AATTTTTTATTTTTTTTGGG+TGG + tig0020402:32058-32077 None:intergenic 15.0%
!! ATTCATTATTTATGTTATTC+TGG + tig0020402:33058-33077 None:intergenic 15.0%
!!! AACATAAATAATGAATCTTT+TGG - tig0020402:33062-33081 Msa1380740:intron 15.0%
!!! ACATAAATAATGAATCTTTT+GGG - tig0020402:33063-33082 Msa1380740:intron 15.0%
!! TAGATTTACAAAAAAAAGTT+TGG + tig0020402:33235-33254 None:intergenic 15.0%
!! AAAGATGTATGTTAAATAAA+TGG + tig0020402:34692-34711 None:intergenic 15.0%
!! ATTTAACATACATCTTATAA+AGG - tig0020402:34730-34749 Msa1380740:intron 15.0%
!! TTTAACATACATCTTATAAA+GGG - tig0020402:34731-34750 Msa1380740:intron 15.0%
!! AACAAAACAATAATAATGTT+AGG - tig0020402:34895-34914 Msa1380740:intron 15.0%
!! ATGCTTATTTATTTATATAG+AGG - tig0020402:35279-35298 Msa1380740:intron 15.0%
!! AAAGATGTATGTTAAATAAA+TGG + tig0020402:34692-34711 None:intergenic 15.0%
!! ATTTAACATACATCTTATAA+AGG - tig0020402:34730-34749 Msa1380740:intron 15.0%
!! TTTAACATACATCTTATAAA+GGG - tig0020402:34731-34750 Msa1380740:intron 15.0%
!! AACAAAACAATAATAATGTT+AGG - tig0020402:34895-34914 Msa1380740:intron 15.0%
!!! TTTTTTTTTACTGTTTTTGT+TGG - tig0020402:35881-35900 Msa1380740:intron 15.0%
!! AAGTATAAATGAATTACAAT+TGG - tig0020402:36279-36298 Msa1380740:intron 15.0%
!!! ATTTTTACTATACACTAAAA+TGG + tig0020402:37089-37108 None:intergenic 15.0%
!! TGTATAGTAAAAATAGTAAA+AGG - tig0020402:37095-37114 Msa1380740:intron 15.0%
!!! CGATATATTTTTTTTTTTGT+CGG + tig0020402:37480-37499 None:intergenic 15.0%
!! ACATTAAATATAACTTCTGA+AGG + tig0020402:29537-29556 None:intergenic 20.0%
!! TTTCAAAAAATAAAGTGTGA+TGG + tig0020402:30088-30107 None:intergenic 20.0%
!! CATAAAATTACTAACAAAAG+AGG + tig0020402:30246-30265 None:intergenic 20.0%
!! GTTAACACAAAAAAAAAAGT+AGG - tig0020402:31212-31231 Msa1380740:intron 20.0%
!! GAAATGATAGAAATACATTA+TGG - tig0020402:31241-31260 Msa1380740:intron 20.0%
!! TTTCGTTATTAAAATGTTAC+CGG - tig0020402:31547-31566 Msa1380740:intron 20.0%
!!! TTTTTAAGAATGTTCTCTTT+TGG - tig0020402:31695-31714 Msa1380740:intron 20.0%
!!! AATTATTTAACTATTGGTCT+CGG - tig0020402:31971-31990 Msa1380740:intron 20.0%
!!! TGCTAAAATTTTATACTGTT+AGG + tig0020402:32099-32118 None:intergenic 20.0%
!!! TTTTTGCTTATATTAATGAC+CGG + tig0020402:32192-32211 None:intergenic 20.0%
!!! TATTTTTGGAATTTTTTGCA+AGG + tig0020402:32536-32555 None:intergenic 20.0%
!!! TTTTTGAAGAAATGTAAGAA+AGG - tig0020402:32784-32803 Msa1380740:intron 20.0%
!!! CTTTTTTTTGTAAATCTAGA+AGG - tig0020402:33237-33256 Msa1380740:intron 20.0%
!! AAAATGAACCATATTTATAG+GGG + tig0020402:33795-33814 None:intergenic 20.0%
!! GAAAATGAACCATATTTATA+GGG + tig0020402:33796-33815 None:intergenic 20.0%
!! AGAAAATGAACCATATTTAT+AGG + tig0020402:33797-33816 None:intergenic 20.0%
!! ATAGGATTAGAAATAGATTT+AGG - tig0020402:34152-34171 Msa1380740:intron 20.0%
!! ATGCTTGTTTATTTATATAG+AGG - tig0020402:34577-34596 Msa1380740:intron 20.0%
!! TTTATTCAATCATTCAATCT+TGG - tig0020402:34757-34776 Msa1380740:intron 20.0%
!! AATAATGTTAGGTTAAAGAA+TGG - tig0020402:34906-34925 Msa1380740:intron 20.0%
!! GGGTAAAATTGAAAAAAATA+GGG - tig0020402:34416-34435 Msa1380740:intron 20.0%
!! TTTATTCAATCATTCAATCT+TGG - tig0020402:34757-34776 Msa1380740:intron 20.0%
!! AATAATGTTAGGTTAAAGAA+TGG - tig0020402:34906-34925 Msa1380740:intron 20.0%
!! TAAATTTCATATGAGGATAT+AGG + tig0020402:36085-36104 None:intergenic 20.0%
!! TAATCTGAATGAAAATGAAA+AGG + tig0020402:36223-36242 None:intergenic 20.0%
!! TGGGAAAAATAAGATTATTA+CGG + tig0020402:37160-37179 None:intergenic 20.0%
!!! TCTTTTTAAAAAAAAAGGGT+GGG + tig0020402:37299-37318 None:intergenic 20.0%
!!! TTCTTTTTAAAAAAAAAGGG+TGG + tig0020402:37300-37319 None:intergenic 20.0%
!!! AATTGAAGATGAAAAACTTT+TGG - tig0020402:37901-37920 Msa1380740:intron 20.0%
!! TAAATTCTACAAGGAAAAAA+GGG + tig0020402:38008-38027 None:intergenic 20.0%
!! TTAAATATAACTTCTGAAGG+AGG + tig0020402:29534-29553 None:intergenic 25.0%
! TTTAGCTACTATTCTATGTA+TGG - tig0020402:29585-29604 Msa1380740:intron 25.0%
!! TACTCAATTCAAAGCATTTA+TGG - tig0020402:29939-29958 Msa1380740:intron 25.0%
! ATGAATCGATTAAATGTATG+AGG - tig0020402:30168-30187 Msa1380740:intron 25.0%
! GATACATTTATGTACTATAG+TGG + tig0020402:30199-30218 None:intergenic 25.0%
!!! CTGATTCAATTTTTTCTAGA+GGG + tig0020402:30918-30937 None:intergenic 25.0%
!!! ACTGATTCAATTTTTTCTAG+AGG + tig0020402:30919-30938 None:intergenic 25.0%
!!! AAATAACTTATGGTCTTGTA+AGG + tig0020402:30942-30961 None:intergenic 25.0%
! GGATGACAATAAATAACTTA+TGG + tig0020402:30952-30971 None:intergenic 25.0%
! ACTAACATAACTGAATGATA+GGG + tig0020402:30973-30992 None:intergenic 25.0%
! AACTAACATAACTGAATGAT+AGG + tig0020402:30974-30993 None:intergenic 25.0%
!! TTTGCTTATATTCGTTTTGT+TGG + tig0020402:31469-31488 None:intergenic 25.0%
!!! TCTTTTTGACTTGTACATAA+TGG + tig0020402:31587-31606 None:intergenic 25.0%
! ATTCTGAATCTATCCTTAAA+AGG - tig0020402:31651-31670 Msa1380740:intron 25.0%
!!! CTAAGAATTGATTCCTTTTA+AGG + tig0020402:31667-31686 None:intergenic 25.0%
!! ATTATTTAACTATTGGTCTC+GGG - tig0020402:31972-31991 Msa1380740:intron 25.0%
! AATTAATGACAAACATGATC+AGG - tig0020402:32156-32175 Msa1380740:intron 25.0%
! ATTAATGACAAACATGATCA+GGG - tig0020402:32157-32176 Msa1380740:intron 25.0%
! CATTCGTTTAATTATGTATG+TGG + tig0020402:32266-32285 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - tig0020402:32291-32310 Msa1380740:intron 25.0%
! AAATAAAGATCTACATCTTC+CGG + tig0020402:32313-32332 None:intergenic 25.0%
!!! AACAAGATTGTTAGTTTTTC+CGG - tig0020402:32581-32600 Msa1380740:intron 25.0%
!!! AAGTTTTTTAGGTAGCTTTT+GGG + tig0020402:32760-32779 None:intergenic 25.0%
!!! TAAGTTTTTTAGGTAGCTTT+TGG + tig0020402:32761-32780 None:intergenic 25.0%
!!! ACTTGTTTTAGGCTATAAAA+AGG + tig0020402:32848-32867 None:intergenic 25.0%
!!! AATTACCTAGTACTTGTTTT+AGG + tig0020402:32859-32878 None:intergenic 25.0%
!!! TTTTAAAGCGTTTTTTTGGA+CGG + tig0020402:32916-32935 None:intergenic 25.0%
!!! TGAGTTTTAAAGCGTTTTTT+TGG + tig0020402:32920-32939 None:intergenic 25.0%
! ACATTTCGGATTATATAATC+CGG + tig0020402:33000-33019 None:intergenic 25.0%
!!! AAATAATGAATCTTTTGGGA+AGG - tig0020402:33067-33086 Msa1380740:intron 25.0%
!! TTTGAAAAACGTTTTCTTTG+TGG + tig0020402:33693-33712 None:intergenic 25.0%
!!! AAAACGTTTTTCAAACGTTT+TGG - tig0020402:33698-33717 Msa1380740:intron 25.0%
! TATAGCTTATGTAATAGGAT+AGG - tig0020402:34134-34153 Msa1380740:intron 25.0%
!! TTAGAACTTTTGCAATTGTA+AGG + tig0020402:34325-34344 None:intergenic 25.0%
! GATTTATTTGCAGATATATC+CGG + tig0020402:34374-34393 None:intergenic 25.0%
! GATATATCTGCAAATAAATC+CGG - tig0020402:34374-34393 Msa1380740:intron 25.0%
!! CTGATGGAATAAATTTTTGA+TGG - tig0020402:34817-34836 Msa1380740:intron 25.0%
!!! AACTAAGGTAGTTTTGTTTA+AGG + tig0020402:34859-34878 None:intergenic 25.0%
! TTCGTTTATAGAAAAGGAAT+TGG + tig0020402:34997-35016 None:intergenic 25.0%
! CTACAATTCGTTTATAGAAA+AGG + tig0020402:35003-35022 None:intergenic 25.0%
!! TTAGAACTTTTGCAATTGTA+AGG + tig0020402:34325-34344 None:intergenic 25.0%
! GATTTATTTGCAGATATATC+CGG + tig0020402:34374-34393 None:intergenic 25.0%
! GATATATCTGCAAATAAATC+CGG - tig0020402:34374-34393 Msa1380740:intron 25.0%
! GGGGTAAAATTGAAAAAAAT+AGG - tig0020402:34415-34434 Msa1380740:intron 25.0%
!! CTGATGGAATAAATTTTTGA+TGG - tig0020402:34817-34836 Msa1380740:intron 25.0%
!!! AACTAAGGTAGTTTTGTTTA+AGG + tig0020402:34859-34878 None:intergenic 25.0%
!! CAATTCCTTTTCTATAAAGA+CGG - tig0020402:35696-35715 Msa1380740:intron 25.0%
!! AATTCCTTTTCTATAAAGAC+GGG - tig0020402:35697-35716 Msa1380740:intron 25.0%
! TTACATGATGTAAACTTTAG+TGG + tig0020402:35753-35772 None:intergenic 25.0%
!! ATTTTTACGCGTTTTATGTT+TGG - tig0020402:35842-35861 Msa1380740:intron 25.0%
! CAAAGATAAGCTTAATTTCT+CGG - tig0020402:36001-36020 Msa1380740:intron 25.0%
! TGCAAAGTAAATTTCATATG+AGG + tig0020402:36092-36111 None:intergenic 25.0%
!! TTAGTGCTTGTTTAGTATTT+TGG - tig0020402:36311-36330 Msa1380740:intron 25.0%
! ATTTCTTCAGACAATATTTC+TGG + tig0020402:36458-36477 None:intergenic 25.0%
!!! AAAGTATTTTTTGATGCAAC+TGG - tig0020402:36602-36621 Msa1380740:intron 25.0%
! TAGAAATTAGAAAGATGAGA+AGG + tig0020402:36731-36750 None:intergenic 25.0%
! AACCTATATGTTTATCTTAC+AGG - tig0020402:36926-36945 Msa1380740:CDS 25.0%
! AACCTGTAAGATAAACATAT+AGG + tig0020402:36931-36950 None:intergenic 25.0%
! TATATGTTTATCTTACAGGT+TGG - tig0020402:36930-36949 Msa1380740:CDS 25.0%
! TTTACTATACACTAAAATGG+CGG + tig0020402:37086-37105 None:intergenic 25.0%
! GGGAAAAATAAGATTATTAC+GGG + tig0020402:37159-37178 None:intergenic 25.0%
!!! CTTTTTAAAAAAAAAGGGTG+GGG + tig0020402:37298-37317 None:intergenic 25.0%
! TTTATAAAGAGACTTAGTTG+TGG + tig0020402:37443-37462 None:intergenic 25.0%
! TAAACTAACTAACAAACTTC+CGG - tig0020402:37564-37583 Msa1380740:intron 25.0%
! AAATTCTACAAGGAAAAAAG+GGG + tig0020402:38007-38026 None:intergenic 25.0%
! CTAAATTCTACAAGGAAAAA+AGG + tig0020402:38009-38028 None:intergenic 25.0%
!!! CTTTTTTCCTTGTAGAATTT+AGG - tig0020402:38007-38026 Msa1380740:CDS 25.0%
!!! CTATGGTTTTTCAAATTTTC+AGG - tig0020402:38092-38111 Msa1380740:intron 25.0%
TGTCTCTATAGAAACCAAAA+GGG + tig0020402:29398-29417 None:intergenic 30.0%
TATTCTATGTATGGACATGT+TGG - tig0020402:29594-29613 Msa1380740:intron 30.0%
ATTCTATGTATGGACATGTT+GGG - tig0020402:29595-29614 Msa1380740:intron 30.0%
ATAATTGGAACATCACTCTT+TGG + tig0020402:29850-29869 None:intergenic 30.0%
! AGCTCATTTGCTGAAATAAT+TGG + tig0020402:29865-29884 None:intergenic 30.0%
!!! TTTGGTTTTCCAACAAGATT+TGG - tig0020402:29907-29926 Msa1380740:intron 30.0%
! AAAGCATTTATGGATACAAC+TGG - tig0020402:29949-29968 Msa1380740:intron 30.0%
GATTCATTTCTAATTGATGC+GGG + tig0020402:30155-30174 None:intergenic 30.0%
CGATTCATTTCTAATTGATG+CGG + tig0020402:30156-30175 None:intergenic 30.0%
!! TACTAACAAAAGAGGTACTA+GGG + tig0020402:30238-30257 None:intergenic 30.0%
!! TTACTAACAAAAGAGGTACT+AGG + tig0020402:30239-30258 None:intergenic 30.0%
GTGTTCAAAAGTTTAAGCAT+TGG + tig0020402:30280-30299 None:intergenic 30.0%
! TGGAATGTTTGAGATAGAAA+AGG - tig0020402:30671-30690 Msa1380740:intron 30.0%
! TTTGAGATAGAAAAGGTGAA+AGG - tig0020402:30678-30697 Msa1380740:intron 30.0%
! TCAGTTATGTTAGTTTATCC+TGG - tig0020402:30979-30998 Msa1380740:intron 30.0%
!!! TTTTTTTGTGTTAACCCTCT+GGG + tig0020402:31207-31226 None:intergenic 30.0%
!!! TTTTTTTTGTGTTAACCCTC+TGG + tig0020402:31208-31227 None:intergenic 30.0%
TGGTAAATGCATCTGATTTA+GGG + tig0020402:31315-31334 None:intergenic 30.0%
ATGGTAAATGCATCTGATTT+AGG + tig0020402:31316-31335 None:intergenic 30.0%
AAGAAGAAGAAGAAGAAGAA+TGG + tig0020402:31335-31354 None:intergenic 30.0%
AAGAGAAGAAGAATAAGTTG+AGG + tig0020402:31375-31394 None:intergenic 30.0%
GAAACACTTTGTAAACACAT+TGG + tig0020402:31628-31647 None:intergenic 30.0%
AAGAGATTTATGAGGAACTT+GGG + tig0020402:31734-31753 None:intergenic 30.0%
!! AAGATGTGACTTTTGAGAAA+GGG + tig0020402:31817-31836 None:intergenic 30.0%
!! AAAGATGTGACTTTTGAGAA+AGG + tig0020402:31818-31837 None:intergenic 30.0%
GTAGAAAAATGCGAATCTTT+GGG + tig0020402:31846-31865 None:intergenic 30.0%
GCTAAAAGTTAAAGGTCTTT+GGG + tig0020402:31882-31901 None:intergenic 30.0%
AAACCAAAGAGACGATATTT+AGG + tig0020402:31912-31931 None:intergenic 30.0%
GTGTGTGTGTCAAATATTTA+AGG + tig0020402:32014-32033 None:intergenic 30.0%
!!! TTTATTTTTTTTGGGTGGGT+GGG + tig0020402:32053-32072 None:intergenic 30.0%
!!! TTTTATTTTTTTTGGGTGGG+TGG + tig0020402:32054-32073 None:intergenic 30.0%
! ATTTTATACTGTTAGGTGCT+AGG + tig0020402:32092-32111 None:intergenic 30.0%
! AAGACAAATTAGCTTAGTCA+CGG - tig0020402:32374-32393 Msa1380740:intron 30.0%
TTTGATCCAACTTCTTGTAT+AGG - tig0020402:32444-32463 Msa1380740:intron 30.0%
TGTATAGGTACATGTACATA+TGG - tig0020402:32459-32478 Msa1380740:intron 30.0%
AAAAATTCCAAAAATACCCC+TGG - tig0020402:32540-32559 Msa1380740:intron 30.0%
CTTGTTCGAAAAATGTAATC+CGG + tig0020402:32567-32586 None:intergenic 30.0%
! TTTTTCCGGAACATAAATTC+CGG - tig0020402:32595-32614 Msa1380740:intron 30.0%
ACATAAATTCCGGACAAATA+CGG - tig0020402:32605-32624 Msa1380740:intron 30.0%
ATATGAATACCGTATTTGTC+CGG + tig0020402:32617-32636 None:intergenic 30.0%
! TTTTAGGCTATAAAAAGGCT+TGG + tig0020402:32843-32862 None:intergenic 30.0%
TATAGCCTAAAACAAGTACT+AGG - tig0020402:32851-32870 Msa1380740:intron 30.0%
TCTTATGAACTTGATCATGT+CGG + tig0020402:33160-33179 None:intergenic 30.0%
ATTGCATTGTTCATAAGAAG+AGG + tig0020402:33184-33203 None:intergenic 30.0%
! AAATTTTTGTCATCAAGCTC+AGG + tig0020402:33356-33375 None:intergenic 30.0%
! CTTGATGACAAAAATTTGCA+TGG - tig0020402:33359-33378 Msa1380740:intron 30.0%
!! AAAATTTGCATGGTTTGCTT+TGG - tig0020402:33369-33388 Msa1380740:intron 30.0%
! CATTGCACTAAGATTTTATG+TGG + tig0020402:33472-33491 None:intergenic 30.0%
CATAAAATCTTAGTGCAATG+TGG - tig0020402:33472-33491 Msa1380740:intron 30.0%
!!! GTAAAAACACGTTTTTTGAC+CGG - tig0020402:33734-33753 Msa1380740:intron 30.0%
TATTACATAAGCTATACCAG+TGG + tig0020402:34130-34149 None:intergenic 30.0%
ACTGGTATAGCTTATGTAAT+AGG - tig0020402:34129-34148 Msa1380740:intron 30.0%
GTTCTAATAAAACACTGTTC+CGG - tig0020402:34338-34357 Msa1380740:intron 30.0%
TATATCCGGATTGTATATTC+CGG + tig0020402:34360-34379 None:intergenic 30.0%
TAAATCCGGAAAACATAATC+CGG - tig0020402:34388-34407 Msa1380740:intron 30.0%
TATTATTTGTCGTGAACTGA+TGG - tig0020402:34801-34820 Msa1380740:intron 30.0%
CATTGTTGCAAGAATGAATT+CGG - tig0020402:34929-34948 Msa1380740:intron 30.0%
GTTCTAATAAAACACTGTTC+CGG - tig0020402:34338-34357 Msa1380740:intron 30.0%
TATATCCGGATTGTATATTC+CGG + tig0020402:34360-34379 None:intergenic 30.0%
TAAATCCGGAAAACATAATC+CGG - tig0020402:34388-34407 Msa1380740:intron 30.0%
TATTATTTGTCGTGAACTGA+TGG - tig0020402:34801-34820 Msa1380740:intron 30.0%
CATTGTTGCAAGAATGAATT+CGG - tig0020402:34929-34948 Msa1380740:intron 30.0%
CGTCTTTATAGAAAAGGAAT+TGG + tig0020402:35698-35717 None:intergenic 30.0%
! ATTCCTTTTCTATAAAGACG+GGG - tig0020402:35698-35717 Msa1380740:intron 30.0%
!! CTTATCTTTGGTTCTATGTT+TGG + tig0020402:35991-36010 None:intergenic 30.0%
CGAGAAATTAAGCTTATCTT+TGG + tig0020402:36003-36022 None:intergenic 30.0%
TTTAGTTACCATTCTGTGTA+CGG - tig0020402:36114-36133 Msa1380740:intron 30.0%
TATTGTCTGAAGAAATCCTA+AGG - tig0020402:36462-36481 Msa1380740:intron 30.0%
GTATTACATATTATACGCAG+AGG + tig0020402:36849-36868 None:intergenic 30.0%
!! TATCTTACAGGTTGGTATTA+AGG - tig0020402:36938-36957 Msa1380740:CDS 30.0%
TTTCTTGGACTCTATGTATA+CGG + tig0020402:37059-37078 None:intergenic 30.0%
! TATTTTTCCCACTTAGTGTA+TGG - tig0020402:37169-37188 Msa1380740:intron 30.0%
!!! CTTTTTTCCATACACTAAGT+GGG + tig0020402:37179-37198 None:intergenic 30.0%
!!! TCTTTTTTCCATACACTAAG+TGG + tig0020402:37180-37199 None:intergenic 30.0%
ACAAATAAATCCACTTACCA+TGG - tig0020402:37233-37252 Msa1380740:intron 30.0%
TCTGTTAACTATACAGAGTA+CGG - tig0020402:37597-37616 Msa1380740:intron 30.0%
! TGAAGATGAAAAACTTTTGG+AGG - tig0020402:37904-37923 Msa1380740:intron 30.0%
! AAAGGGGGTAAATATGTTTT+TGG + tig0020402:37991-38010 None:intergenic 30.0%
AATTCTACAAGGAAAAAAGG+GGG + tig0020402:38006-38025 None:intergenic 30.0%
! CTTTTAGTAAGTATATCCGA+TGG + tig0020402:38042-38061 None:intergenic 30.0%
CAAAGTAACTGTTTGTTCTA+TGG - tig0020402:38075-38094 Msa1380740:intron 30.0%
TAGGTACAAAAATCATACCA+TGG + tig0020402:38144-38163 None:intergenic 30.0%
! GGTATGATTTTTGTACCTAT+TGG - tig0020402:38145-38164 Msa1380740:intron 30.0%
CTGTCTCTATAGAAACCAAA+AGG + tig0020402:29399-29418 None:intergenic 35.0%
AGATTCGTGAAAATAGAGAG+AGG + tig0020402:29500-29519 None:intergenic 35.0%
CTAGCTGAAGAGATCAAAAA+TGG - tig0020402:29621-29640 Msa1380740:intron 35.0%
AATGGAGTTGAATCCATAGA+AGG - tig0020402:29639-29658 Msa1380740:intron 35.0%
! TTTTGCTTCTACACCTTCTA+TGG + tig0020402:29655-29674 None:intergenic 35.0%
!! TGTTTGAGAAGTGTTCAGTT+TGG + tig0020402:29706-29725 None:intergenic 35.0%
! TCCAACAAGATTTGGAATGA+TGG - tig0020402:29915-29934 Msa1380740:intron 35.0%
ACAGAAGAATGAGAAACTCA+CGG + tig0020402:30063-30082 None:intergenic 35.0%
TAACAGCGTCTCATACATTT+AGG - tig0020402:30342-30361 Msa1380740:intron 35.0%
AACAGCGTCTCATACATTTA+GGG - tig0020402:30343-30362 Msa1380740:intron 35.0%
! CTAAGGTTTTTCTTACACTC+TGG - tig0020402:30473-30492 Msa1380740:intron 35.0%
! TGATTTTACAATGTACCTGC+AGG - tig0020402:30580-30599 Msa1380740:intron 35.0%
! ATTACACAACTTGTTCACCA+TGG - tig0020402:30612-30631 Msa1380740:intron 35.0%
TCATCAAGGGAAATACTTTG+CGG - tig0020402:30779-30798 Msa1380740:intron 35.0%
GAATTGCAAAGAAGCTCAAA+GGG - tig0020402:30802-30821 Msa1380740:intron 35.0%
AACAAGTGATTTGACTCAAG+TGG - tig0020402:31067-31086 Msa1380740:intron 35.0%
CATCATACTGACGAATCATT+CGG - tig0020402:31101-31120 Msa1380740:CDS 35.0%
AAAAGGAGACCCTGTTAATA+TGG + tig0020402:31177-31196 None:intergenic 35.0%
GGTAAATGCATCTGATTTAG+GGG + tig0020402:31314-31333 None:intergenic 35.0%
GAAGAGATTTATGAGGAACT+TGG + tig0020402:31735-31754 None:intergenic 35.0%
GAGAGAAGAAGAGATTTATG+AGG + tig0020402:31742-31761 None:intergenic 35.0%
GGTAGAAAAATGCGAATCTT+TGG + tig0020402:31847-31866 None:intergenic 35.0%
!!! GTCTTTGGGTAAGTTTTGAA+AGG + tig0020402:31868-31887 None:intergenic 35.0%
GGCTAAAAGTTAAAGGTCTT+TGG + tig0020402:31883-31902 None:intergenic 35.0%
GACACTAGGCTAAAAGTTAA+AGG + tig0020402:31890-31909 None:intergenic 35.0%
TGTCCTAAATATCGTCTCTT+TGG - tig0020402:31906-31925 Msa1380740:intron 35.0%
TGCTTATATTAATGACCGGA+GGG + tig0020402:32188-32207 None:intergenic 35.0%
TTGCTTATATTAATGACCGG+AGG + tig0020402:32189-32208 None:intergenic 35.0%
CATGTACCTATACAAGAAGT+TGG + tig0020402:32453-32472 None:intergenic 35.0%
TTTGTCCGGAATTTATGTTC+CGG + tig0020402:32603-32622 None:intergenic 35.0%
TGTGTCTTTCTTTGATGTCA+AGG - tig0020402:32639-32658 Msa1380740:intron 35.0%
GTGTCTTTCTTTGATGTCAA+GGG - tig0020402:32640-32659 Msa1380740:intron 35.0%
AATGCAATTGTAGGGTTCAT+AGG - tig0020402:32700-32719 Msa1380740:intron 35.0%
AATTGTAGGGTTCATAGGAA+CGG - tig0020402:32705-32724 Msa1380740:intron 35.0%
AAGGATGTGAAGAAGAATGA+AGG - tig0020402:32803-32822 Msa1380740:intron 35.0%
!! CGCTTTAAAACTCAACTAAC+CGG - tig0020402:32926-32945 Msa1380740:intron 35.0%
CGGAAATACTGCATACATTT+CGG + tig0020402:33014-33033 None:intergenic 35.0%
CGAAATGTATGCAGTATTTC+CGG - tig0020402:33012-33031 Msa1380740:intron 35.0%
!! TATGTTATTCTGGTGCCATT+CGG + tig0020402:33048-33067 None:intergenic 35.0%
!! TAATGAATCTTTTGGGAAGG+TGG - tig0020402:33070-33089 Msa1380740:intron 35.0%
!! ATATTTTTGACAGCATGCTC+AGG - tig0020402:33269-33288 Msa1380740:intron 35.0%
! TGAGTTAGCTCTCTATTTGA+CGG + tig0020402:33307-33326 None:intergenic 35.0%
! CTGGTATTGAAGATCAAAAC+CGG - tig0020402:33409-33428 Msa1380740:intron 35.0%
! CAGCATAGGATTCTTTTGTA+TGG + tig0020402:33499-33518 None:intergenic 35.0%
!! TTGGTTCGGATTGTATAATC+CGG + tig0020402:33529-33548 None:intergenic 35.0%
TTCCGGAAAAAGACGATAAT+GGG + tig0020402:33593-33612 None:intergenic 35.0%
ATTCCGGAAAAAGACGATAA+TGG + tig0020402:33594-33613 None:intergenic 35.0%
! TTTTTCCGGAATACGTTATC+CGG - tig0020402:33602-33621 Msa1380740:intron 35.0%
GTTATCCGGATTATATCTTC+CGG - tig0020402:33634-33653 Msa1380740:intron 35.0%
!! CGTTTTTCAAACGTTTTGGA+CGG - tig0020402:33702-33721 Msa1380740:intron 35.0%
TGAACCATATTTATAGGGGA+GGG + tig0020402:33791-33810 None:intergenic 35.0%
ATGAACCATATTTATAGGGG+AGG + tig0020402:33792-33811 None:intergenic 35.0%
ATGGAAACACATCATTGTAG+AGG + tig0020402:33858-33877 None:intergenic 35.0%
AAGAAGAAAATCTGTTGGTG+GGG + tig0020402:34043-34062 None:intergenic 35.0%
GAAGAAGAAAATCTGTTGGT+GGG + tig0020402:34044-34063 None:intergenic 35.0%
TGAAGAAGAAAATCTGTTGG+TGG + tig0020402:34045-34064 None:intergenic 35.0%
! TTTCAATTTTACCCCTTGTC+CGG + tig0020402:34410-34429 None:intergenic 35.0%
GAGCAAGCAAATTACATCAA+TGG - tig0020402:35727-35746 Msa1380740:intron 35.0%
!!! CTTACTGTCTAACTGGTTTT+TGG - tig0020402:35792-35811 Msa1380740:intron 35.0%
CTAGCTGAAGAGATTCTAAA+GGG - tig0020402:36150-36169 Msa1380740:intron 35.0%
! TAGCTGAAGAGATTCTAAAG+GGG - tig0020402:36151-36170 Msa1380740:intron 35.0%
! CGTTGACATTGACATTGATT+TGG + tig0020402:36346-36365 None:intergenic 35.0%
GTGCATATTTGATATCAGAG+TGG + tig0020402:36392-36411 None:intergenic 35.0%
!!! GAAGCTGATGGTTTTTTGTT+TGG - tig0020402:36542-36561 Msa1380740:intron 35.0%
!!! TTTGGTTTTCCAGCAAGATA+TGG - tig0020402:36560-36579 Msa1380740:intron 35.0%
TTGATGCAACTGGAAGTTTA+TGG - tig0020402:36612-36631 Msa1380740:intron 35.0%
! TTTTGTCAAGTATAGCCTAG+TGG - tig0020402:36766-36785 Msa1380740:intron 35.0%
! ATGTGAAGAAGTGAAGTATC+TGG - tig0020402:36809-36828 Msa1380740:intron 35.0%
! TGTGAAGAAGTGAAGTATCT+GGG - tig0020402:36810-36829 Msa1380740:intron 35.0%
TACATATTATACGCAGAGGT+CGG + tig0020402:36845-36864 None:intergenic 35.0%
! TGAGTTTAACTCAGTTGGTA+GGG + tig0020402:36873-36892 None:intergenic 35.0%
CAAGTTCTCATCTCTATGTT+TGG + tig0020402:36901-36920 None:intergenic 35.0%
TTCTTGGACTCTATGTATAC+GGG + tig0020402:37058-37077 None:intergenic 35.0%
! ATTACGGGTTTGAGATAATG+TGG + tig0020402:37144-37163 None:intergenic 35.0%
ATTACATCTTCCATGGTAAG+TGG + tig0020402:37246-37265 None:intergenic 35.0%
TTACCATGGAAGATGTAATC+AGG - tig0020402:37247-37266 Msa1380740:intron 35.0%
TACCATGGAAGATGTAATCA+GGG - tig0020402:37248-37267 Msa1380740:intron 35.0%
TAAAGAGACTTAGTTGTGGT+AGG + tig0020402:37439-37458 None:intergenic 35.0%
TTTCCTTGTAGAATTTAGGC+TGG - tig0020402:38011-38030 Msa1380740:CDS 35.0%
GTACCTATTGGATACACATT+TGG - tig0020402:38157-38176 Msa1380740:intron 35.0%
! TGGAATGTTTGAGATGGAAA+AGG - tig0020402:38183-38202 Msa1380740:intron 35.0%
! TTTGAGATGGAAAAGGTGAA+GGG - tig0020402:38190-38209 Msa1380740:intron 35.0%
! CATATGGTTCAGGAACTTTT+GGG - tig0020402:38221-38240 Msa1380740:CDS 35.0%
! ATATGGTTCAGGAACTTTTG+GGG - tig0020402:38222-38241 Msa1380740:CDS 35.0%
AGAACCTAGTGAGTTAGAAT+TGG - tig0020402:38258-38277 Msa1380740:CDS 35.0%
! CTTCAAGTTACTAGCAGCAA+TGG - tig0020402:29440-29459 Msa1380740:CDS 40.0%
AAGGTGTAGAAGCAAAACTC+TGG - tig0020402:29658-29677 Msa1380740:intron 40.0%
!! GAGAAGTGTTCAGTTTGGTT+TGG + tig0020402:29701-29720 None:intergenic 40.0%
ACCTCTTCTGGCAATATTTC+AGG + tig0020402:29805-29824 None:intergenic 40.0%
ATATTGCCAGAAGAGGTTCT+TGG - tig0020402:29808-29827 Msa1380740:intron 40.0%
TATTGCCAGAAGAGGTTCTT+GGG - tig0020402:29809-29828 Msa1380740:intron 40.0%
ATTGGAACATCACTCTTTGG+AGG + tig0020402:29847-29866 None:intergenic 40.0%
TTCAGCAAATGAGCTTCTTG+AGG - tig0020402:29870-29889 Msa1380740:intron 40.0%
!!! GAGGCTGATGGTTTTTTGTT+TGG - tig0020402:29889-29908 Msa1380740:intron 40.0%
GCCATCATTCCAAATCTTGT+TGG + tig0020402:29919-29938 None:intergenic 40.0%
! TTTTACAGCACTGCTTGTCA+AGG - tig0020402:30018-30037 Msa1380740:intron 40.0%
CTGAGAAATTGCTACTGCTA+AGG - tig0020402:30456-30475 Msa1380740:intron 40.0%
! ATAGCACTTGCGGAAAGTAT+GGG + tig0020402:30503-30522 None:intergenic 40.0%
TGTAATAGATGTCAACCTGC+AGG + tig0020402:30598-30617 None:intergenic 40.0%
AGCACCAAATGTGTATCCAA+CGG + tig0020402:30652-30671 None:intergenic 40.0%
GAGATAGAAAAGGTGAAAGG+TGG - tig0020402:30681-30700 Msa1380740:intron 40.0%
! TGAGCCAGTTCTAATTCAGT+GGG + tig0020402:30753-30772 None:intergenic 40.0%
! TTGAGCCAGTTCTAATTCAG+TGG + tig0020402:30754-30773 None:intergenic 40.0%
! TGGCTCAAGCTTTTCATCAA+GGG - tig0020402:30766-30785 Msa1380740:intron 40.0%
CATCAAGGGAAATACTTTGC+GGG - tig0020402:30780-30799 Msa1380740:intron 40.0%
GGAATTGCAAAGAAGCTCAA+AGG - tig0020402:30801-30820 Msa1380740:intron 40.0%
AATCCAACTCGATTCTTGAG+TGG - tig0020402:31127-31146 Msa1380740:CDS 40.0%
GACCCTGTTAATATGGAGTT+CGG + tig0020402:31170-31189 None:intergenic 40.0%
AAAATGTTACCGGTCGTAGA+TGG - tig0020402:31557-31576 Msa1380740:intron 40.0%
GTCGTAAATCTCTCACCAAA+AGG - tig0020402:31786-31805 Msa1380740:intron 40.0%
!! ATGTGACTTTTGAGAAAGGG+TGG + tig0020402:31814-31833 None:intergenic 40.0%
! GAGACGATATTTAGGACACT+AGG + tig0020402:31904-31923 None:intergenic 40.0%
TATACTGTTAGGTGCTAGGT+AGG + tig0020402:32088-32107 None:intergenic 40.0%
!! GTATTACTTTTCCCACCCTA+TGG - tig0020402:32498-32517 Msa1380740:intron 40.0%
AAAAATGTAATCCGGACCAG+GGG + tig0020402:32559-32578 None:intergenic 40.0%
GAAAAATGTAATCCGGACCA+GGG + tig0020402:32560-32579 None:intergenic 40.0%
CTTGTGTGGGGTTCATATAA+CGG + tig0020402:32676-32695 None:intergenic 40.0%
AATTGCATTGCAGCTTGTGT+GGG + tig0020402:32689-32708 None:intergenic 40.0%
ACAAGCTGCAATGCAATTGT+AGG - tig0020402:32691-32710 Msa1380740:intron 40.0%
CAAGCTGCAATGCAATTGTA+GGG - tig0020402:32692-32711 Msa1380740:intron 40.0%
TGACGTTTCACCAAAAGGTT+TGG + tig0020402:32952-32971 None:intergenic 40.0%
AAGTTGTTACTGAGTGCTTC+CGG - tig0020402:32978-32997 Msa1380740:intron 40.0%
TCCGGATTATATAGTCCGAA+TGG - tig0020402:33030-33049 Msa1380740:intron 40.0%
GCCATTCGGACTATATAATC+CGG + tig0020402:33034-33053 None:intergenic 40.0%
ATTGAAGATCAAAACCGGAG+AGG - tig0020402:33414-33433 Msa1380740:intron 40.0%
TTGAAGATCAAAACCGGAGA+GGG - tig0020402:33415-33434 Msa1380740:intron 40.0%
CTCTATAAATACACCCTCTC+CGG + tig0020402:33431-33450 None:intergenic 40.0%
GGTGTATTTATAGAGGTCCT+TGG - tig0020402:33436-33455 Msa1380740:intron 40.0%
! ATAGAGGTCCTTGGATGTTT+TGG - tig0020402:33445-33464 Msa1380740:intron 40.0%
TATGTGGTCCAAAACATCCA+AGG + tig0020402:33456-33475 None:intergenic 40.0%
AATCCTATGCTGAAGCAATC+CGG - tig0020402:33507-33526 Msa1380740:intron 40.0%
AACGTCCCAAGTTTCACTTT+GGG - tig0020402:33563-33582 Msa1380740:intron 40.0%
! ACCCCATTATCGTCTTTTTC+CGG - tig0020402:33588-33607 Msa1380740:intron 40.0%
TCCGGAAAAAGACGATAATG+GGG + tig0020402:33592-33611 None:intergenic 40.0%
!! TTTTCAAACGTTTTGGACGG+TGG - tig0020402:33705-33724 Msa1380740:intron 40.0%
AACCATATTTATAGGGGAGG+GGG + tig0020402:33789-33808 None:intergenic 40.0%
GAACCATATTTATAGGGGAG+GGG + tig0020402:33790-33809 None:intergenic 40.0%
GGAGAAGAGAAGAAAGAAGA+AGG + tig0020402:33834-33853 None:intergenic 40.0%
GAAACACATCATTGTAGAGG+AGG + tig0020402:33855-33874 None:intergenic 40.0%
CAATGATGTGTTTCCATCGT+TGG - tig0020402:33861-33880 Msa1380740:intron 40.0%
TTTCTATGAAAGGCCAACGA+TGG + tig0020402:33877-33896 None:intergenic 40.0%
AAGAGGCCTCTTTCTATGAA+AGG + tig0020402:33887-33906 None:intergenic 40.0%
TTCATAGAAAGAGGCCTCTT+TGG - tig0020402:33887-33906 Msa1380740:intron 40.0%
GGTCATATGATCGGTCAATA+GGG - tig0020402:33922-33941 Msa1380740:intron 40.0%
ATATGATCGGTCAATAGGGT+GGG - tig0020402:33926-33945 Msa1380740:intron 40.0%
CGGTGAAGAAGAAAATCTGT+TGG + tig0020402:34048-34067 None:intergenic 40.0%
CTGTTCCGGAATATACAATC+CGG - tig0020402:34352-34371 Msa1380740:intron 40.0%
! CTTGTCCGGATTATGTTTTC+CGG + tig0020402:34396-34415 None:intergenic 40.0%
GGAAAACATAATCCGGACAA+GGG - tig0020402:34395-34414 Msa1380740:intron 40.0%
GAAAACATAATCCGGACAAG+GGG - tig0020402:34396-34415 Msa1380740:intron 40.0%
CTGTTCCGGAATATACAATC+CGG - tig0020402:34352-34371 Msa1380740:intron 40.0%
! CTTGTCCGGATTATGTTTTC+CGG + tig0020402:34396-34415 None:intergenic 40.0%
GGAAAACATAATCCGGACAA+GGG - tig0020402:34395-34414 Msa1380740:intron 40.0%
GAAAACATAATCCGGACAAG+GGG - tig0020402:34396-34415 Msa1380740:intron 40.0%
TCTCCCCGTCTTTATAGAAA+AGG + tig0020402:35704-35723 None:intergenic 40.0%
! TTTTCTATAAAGACGGGGAG+AGG - tig0020402:35703-35722 Msa1380740:intron 40.0%
GTTAGACAGTAAGAAGAGAG+AGG + tig0020402:35785-35804 None:intergenic 40.0%
CTCTCTTCTTACTGTCTAAC+TGG - tig0020402:35785-35804 Msa1380740:intron 40.0%
! CTATGTTTGGAGTAGTTGCT+AGG + tig0020402:35978-35997 None:intergenic 40.0%
GCTAGCTGAAGAGATTCTAA+AGG - tig0020402:36149-36168 Msa1380740:intron 40.0%
! AGCTGAAGAGATTCTAAAGG+GGG - tig0020402:36152-36171 Msa1380740:intron 40.0%
AAGGAGTAGAAGCAAAACTC+TGG - tig0020402:36187-36206 Msa1380740:intron 40.0%
AGCTGTTTAGGTGAAATGTC+TGG + tig0020402:36518-36537 None:intergenic 40.0%
GACATCATTCCATATCTTGC+TGG + tig0020402:36572-36591 None:intergenic 40.0%
TGGAACAAACAAACACTTGC+AGG - tig0020402:36632-36651 Msa1380740:intron 40.0%
! TTTTTCTCCACTGCTTCTCA+AGG - tig0020402:36671-36690 Msa1380740:intron 40.0%
TGAGAAGGATGAGTGACTAA+CGG + tig0020402:36716-36735 None:intergenic 40.0%
! GTGAAGAAGTGAAGTATCTG+GGG - tig0020402:36811-36830 Msa1380740:intron 40.0%
ACATATTATACGCAGAGGTC+GGG + tig0020402:36844-36863 None:intergenic 40.0%
!! AGTTTAACTCAGTTGGTAGG+GGG + tig0020402:36871-36890 None:intergenic 40.0%
!! GAGTTTAACTCAGTTGGTAG+GGG + tig0020402:36872-36891 None:intergenic 40.0%
GTGAGTTTAACTCAGTTGGT+AGG + tig0020402:36874-36893 None:intergenic 40.0%
ACCAACTGAGTTAAACTCAC+TGG - tig0020402:36874-36893 Msa1380740:CDS 40.0%
CCAACTGAGTTAAACTCACT+GGG - tig0020402:36875-36894 Msa1380740:CDS 40.0%
!! TAAAATGGCGGACTCTTTCT+TGG + tig0020402:37074-37093 None:intergenic 40.0%
ACCATGGAAGATGTAATCAG+GGG - tig0020402:37249-37268 Msa1380740:intron 40.0%
! GTTAACAGAGAGTTTGAGAC+CGG + tig0020402:37586-37605 None:intergenic 40.0%
AAGCCAGCCTAAATTCTACA+AGG + tig0020402:38017-38036 None:intergenic 40.0%
! ATTACTCAGCTTGTTCACCA+TGG - tig0020402:38124-38143 Msa1380740:intron 40.0%
GCACCAAATGTGTATCCAAT+AGG + tig0020402:38163-38182 None:intergenic 40.0%
!! ATTGGATACACATTTGGTGC+TGG - tig0020402:38163-38182 Msa1380740:intron 40.0%
! GTTTGAGATGGAAAAGGTGA+AGG - tig0020402:38189-38208 Msa1380740:intron 40.0%
CCAAAAGTTCCTGAACCATA+TGG + tig0020402:38223-38242 None:intergenic 40.0%
! CCATATGGTTCAGGAACTTT+TGG - tig0020402:38220-38239 Msa1380740:CDS 40.0%
!! ACTTTTGGGGAACATGGAAT+AGG - tig0020402:38235-38254 Msa1380740:CDS 40.0%
TGAGCCAATTCTAACTCACT+AGG + tig0020402:38265-38284 None:intergenic 40.0%
!! ATTGGCTCAAGCTTTTCATC+AGG - tig0020402:38276-38295 Msa1380740:CDS 40.0%
! TTGGCTCAAGCTTTTCATCA+GGG - tig0020402:38277-38296 Msa1380740:CDS 40.0%
CATCAGGGAAAATACTTTGC+TGG - tig0020402:38292-38311 Msa1380740:CDS 40.0%
GGAATTGCAAAGAAGCTCAA+AGG - tig0020402:30801-30820 Msa1380740:intron 40.0%
!! AGAAACCAAAAGGGCGTTCT+TGG + tig0020402:29389-29408 None:intergenic 45.0%
TGTAGAAGCAAAACTCTGGC+AGG - tig0020402:29662-29681 Msa1380740:intron 45.0%
GCCTGAAATATTGCCAGAAG+AGG - tig0020402:29801-29820 Msa1380740:intron 45.0%
ATCTTCCCAAGAACCTCTTC+TGG + tig0020402:29817-29836 None:intergenic 45.0%
AATGAGCTTCTTGAGGCTGA+TGG - tig0020402:29877-29896 Msa1380740:intron 45.0%
TGGATACAACTGGAGACCTA+TGG - tig0020402:29959-29978 Msa1380740:intron 45.0%
CAAGTTTCTGTGTGCACCAT+AGG + tig0020402:29978-29997 None:intergenic 45.0%
GATAGCACTTGCGGAAAGTA+TGG + tig0020402:30504-30523 None:intergenic 45.0%
CATGACTCTGATAGCACTTG+CGG + tig0020402:30513-30532 None:intergenic 45.0%
CGGGCACAAAAATCATTCCA+TGG + tig0020402:30632-30651 None:intergenic 45.0%
! GGAATGATTTTTGTGCCCGT+TGG - tig0020402:30633-30652 Msa1380740:intron 45.0%
GCACCAAATGTGTATCCAAC+GGG + tig0020402:30651-30670 None:intergenic 45.0%
!! GTTGGATACACATTTGGTGC+TGG - tig0020402:30651-30670 Msa1380740:intron 45.0%
GCATAAGTTCCAGCACCATA+TGG + tig0020402:30711-30730 None:intergenic 45.0%
! TATGGTGCTGGAACTTATGC+AGG - tig0020402:30711-30730 Msa1380740:intron 45.0%
! ATGGTGCTGGAACTTATGCA+GGG - tig0020402:30712-30731 Msa1380740:intron 45.0%
ACAGCCCACTGAATTAGAAC+TGG - tig0020402:30746-30765 Msa1380740:intron 45.0%
! CTGGCTCAAGCTTTTCATCA+AGG - tig0020402:30765-30784 Msa1380740:intron 45.0%
AGTGGATGCAGAATATGCAG+TGG + tig0020402:30847-30866 None:intergenic 45.0%
TATCCTGGACGATGTTGATG+TGG - tig0020402:30994-31013 Msa1380740:intron 45.0%
GTTCCACTCAAGAATCGAGT+TGG + tig0020402:31133-31152 None:intergenic 45.0%
ACGCCGAACTCCATATTAAC+AGG - tig0020402:31164-31183 Msa1380740:CDS 45.0%
CGCCGAACTCCATATTAACA+GGG - tig0020402:31165-31184 Msa1380740:CDS 45.0%
! TCCTTTTCCTAAGACCCAGA+GGG - tig0020402:31190-31209 Msa1380740:CDS 45.0%
AATGGATCACCATCTACGAC+CGG + tig0020402:31569-31588 None:intergenic 45.0%
! TGAGAAAGGGTGGTACCTTT+TGG + tig0020402:31804-31823 None:intergenic 45.0%
!!! TTTTTTTTGGGTGGGTGGGT+GGG + tig0020402:32049-32068 None:intergenic 45.0%
!!! ATTTTTTTTGGGTGGGTGGG+TGG + tig0020402:32050-32069 None:intergenic 45.0%
TTCCAAAAATACCCCTGGTC+CGG - tig0020402:32545-32564 Msa1380740:intron 45.0%
CGAAAAATGTAATCCGGACC+AGG + tig0020402:32561-32580 None:intergenic 45.0%
ATTGCATTGCAGCTTGTGTG+GGG + tig0020402:32688-32707 None:intergenic 45.0%
CAATTGCATTGCAGCTTGTG+TGG + tig0020402:32690-32709 None:intergenic 45.0%
!!! GTAGCTTTTGGGAGTGTTTG+TGG + tig0020402:32749-32768 None:intergenic 45.0%
! AACTAACCGGCCAAACCTTT+TGG - tig0020402:32939-32958 Msa1380740:intron 45.0%
GTTTCACCAAAAGGTTTGGC+CGG + tig0020402:32948-32967 None:intergenic 45.0%
! ACCTTTTGGTGAAACGTCAC+TGG - tig0020402:32953-32972 Msa1380740:intron 45.0%
!! GGAAGCACTCAGTAACAACT+TGG + tig0020402:32979-32998 None:intergenic 45.0%
! GCTTTTGAACTCGATCTTGC+CGG - tig0020402:33104-33123 Msa1380740:intron 45.0%
ATCGTAACATGTCAGTTGGC+AGG + tig0020402:33130-33149 None:intergenic 45.0%
GCCAACTGACATGTTACGAT+CGG - tig0020402:33130-33149 Msa1380740:intron 45.0%
CTTTCTAATGCTGTCGCGAA+TGG + tig0020402:33331-33350 None:intergenic 45.0%
! GGTGTGTTTGTGTGTTTTGC+TGG - tig0020402:33390-33409 Msa1380740:intron 45.0%
! CGGAGAGGGTGTATTTATAG+AGG - tig0020402:33429-33448 Msa1380740:intron 45.0%
AATCCGGATTGCTTCAGCAT+AGG + tig0020402:33513-33532 None:intergenic 45.0%
GAAACTTGGGACGTTGTGTA+TGG + tig0020402:33558-33577 None:intergenic 45.0%
CAACGTCCCAAGTTTCACTT+TGG - tig0020402:33562-33581 Msa1380740:intron 45.0%
GGTGTCCCAAAGTGAAACTT+GGG + tig0020402:33571-33590 None:intergenic 45.0%
GCATTCCGGATAACGTATTC+CGG + tig0020402:33610-33629 None:intergenic 45.0%
TCCGGAATGCATGTGTTATC+CGG - tig0020402:33620-33639 Msa1380740:intron 45.0%
TCCGGATAACACATGCATTC+CGG + tig0020402:33624-33643 None:intergenic 45.0%
GCAGTCCGGAAGATATAATC+CGG + tig0020402:33642-33661 None:intergenic 45.0%
!!! CGTTTTTTGACCGGCATTGA+TGG - tig0020402:33743-33762 Msa1380740:intron 45.0%
AGGGGGGTTAAAAAACGTGT+GGG + tig0020402:33772-33791 None:intergenic 45.0%
ACCATATTTATAGGGGAGGG+GGG + tig0020402:33788-33807 None:intergenic 45.0%
!! CGTTGGCCTTTCATAGAAAG+AGG - tig0020402:33878-33897 Msa1380740:intron 45.0%
!! GCCTCTTTGGAAAAGCATCA+GGG - tig0020402:33900-33919 Msa1380740:intron 45.0%
!! CCTCTTTGGAAAAGCATCAG+GGG - tig0020402:33901-33920 Msa1380740:intron 45.0%
AGCATCAGGGGTCATATGAT+CGG - tig0020402:33913-33932 Msa1380740:intron 45.0%
GGGTCATATGATCGGTCAAT+AGG - tig0020402:33921-33940 Msa1380740:intron 45.0%
CATATGATCGGTCAATAGGG+TGG - tig0020402:33925-33944 Msa1380740:intron 45.0%
TATGATCGGTCAATAGGGTG+GGG - tig0020402:33927-33946 Msa1380740:intron 45.0%
! GGTCAGTTTGAATCTGAGGT+TGG - tig0020402:33949-33968 Msa1380740:intron 45.0%
!! AATCTGAGGTTGGTTTGCCT+GGG - tig0020402:33959-33978 Msa1380740:intron 45.0%
TAGGGAACAAGAGACCATGA+TGG + tig0020402:33996-34015 None:intergenic 45.0%
TGATGAAGAGGAAAGAGGGT+GGG + tig0020402:34085-34104 None:intergenic 45.0%
CCACTGATGAAGAGGAAAGA+GGG + tig0020402:34089-34108 None:intergenic 45.0%
CGGAAAACATAATCCGGACA+AGG - tig0020402:34394-34413 Msa1380740:intron 45.0%
CGGAAAACATAATCCGGACA+AGG - tig0020402:34394-34413 Msa1380740:intron 45.0%
CAACATGTCCGTACACAGAA+TGG + tig0020402:36125-36144 None:intergenic 45.0%
AGTAGAAGCAAAACTCTGGC+AGG - tig0020402:36191-36210 Msa1380740:intron 45.0%
! GAGGTGCTTTCATCTTCCTT+AGG + tig0020402:36481-36500 None:intergenic 45.0%
! ATGTCTGGAACTTCACTCCT+TGG + tig0020402:36503-36522 None:intergenic 45.0%
TCAGCTTCAGCAAGCTGTTT+AGG + tig0020402:36530-36549 None:intergenic 45.0%
!! AAACAGCTTGCTGAAGCTGA+TGG - tig0020402:36530-36549 Msa1380740:intron 45.0%
TGACTAACGGTGTTTCCTCT+TGG + tig0020402:36703-36722 None:intergenic 45.0%
! ATGTGTGAGCTCTAACCACT+AGG + tig0020402:36784-36803 None:intergenic 45.0%
CCCAGTGAGTTTAACTCAGT+TGG + tig0020402:36878-36897 None:intergenic 45.0%
CCATGGAAGATGTAATCAGG+GGG - tig0020402:37250-37269 Msa1380740:intron 45.0%
CATGGAAGATGTAATCAGGG+GGG - tig0020402:37251-37270 Msa1380740:intron 45.0%
AAGATGTAATCAGGGGGGAA+GGG - tig0020402:37256-37275 Msa1380740:intron 45.0%
! TGGTGCTGGAATGTTTGAGA+TGG - tig0020402:30665-30684 Msa1380740:intron 45.0%
!! TCAGGAACTTTTGGGGAACA+TGG - tig0020402:38229-38248 Msa1380740:CDS 45.0%
!! AATAGTTAAATAATTATAAA+AGG + tig0020402:31966-31985 None:intergenic 5.0%
!!! TTTTATAATTATTTAACTAT+TGG - tig0020402:31965-31984 Msa1380740:intron 5.0%
!!! GATAATTTTTTATTTTTTTT+GGG + tig0020402:32061-32080 None:intergenic 5.0%
!!! AGATAATTTTTTATTTTTTT+TGG + tig0020402:32062-32081 None:intergenic 5.0%
!! AAACAAATATTTAAATATAT+AGG - tig0020402:32351-32370 Msa1380740:intron 5.0%
!! ATATTATAATTCATATATTA+AGG - tig0020402:36430-36449 Msa1380740:intron 5.0%
!!! TTTTTCTTTTTAAAAAAAAA+GGG + tig0020402:37303-37322 None:intergenic 5.0%
!!! ATTTTTCTTTTTAAAAAAAA+AGG + tig0020402:37304-37323 None:intergenic 5.0%
!!! ATGAATTTTTATATTTTTTA+CGG + tig0020402:37700-37719 None:intergenic 5.0%
!!! ATGAATTTTTATATTTTTTA+CGG + tig0020402:37700-37719 None:intergenic 5.0%
! ACTCACCAAGAACGCCCTTT+TGG - tig0020402:29381-29400 Msa1380740:CDS 50.0%
TGGTGCACACAGAAACTTGC+AGG - tig0020402:29979-29998 Msa1380740:intron 50.0%
AAACTTGCAGGAAAGCCTGC+TGG - tig0020402:29991-30010 Msa1380740:intron 50.0%
GTGCTGTAAAAGATGCCAGC+AGG + tig0020402:30009-30028 None:intergenic 50.0%
TACAGCACTGCTTGTCAAGG+AGG - tig0020402:30021-30040 Msa1380740:intron 50.0%
CGCAAGTGCTATCAGAGTCA+TGG - tig0020402:30511-30530 Msa1380740:intron 50.0%
GTGCCCGTTGGATACACATT+TGG - tig0020402:30645-30664 Msa1380740:intron 50.0%
GTGAAAGGTGGCTCACCATA+TGG - tig0020402:30693-30712 Msa1380740:intron 50.0%
! TGGTGCTGGAACTTATGCAG+GGG - tig0020402:30713-30732 Msa1380740:intron 50.0%
CTACCACATCAACATCGTCC+AGG + tig0020402:31000-31019 None:intergenic 50.0%
! CTCCTTTTCCTAAGACCCAG+AGG - tig0020402:31189-31208 Msa1380740:CDS 50.0%
ACCCTCTGGGTCTTAGGAAA+AGG + tig0020402:31194-31213 None:intergenic 50.0%
GTGTTAACCCTCTGGGTCTT+AGG + tig0020402:31200-31219 None:intergenic 50.0%
! TTTTTGCAAGGCGCACGAGA+AGG + tig0020402:32524-32543 None:intergenic 50.0%
!!! ATCCGGACCAGGGGTATTTT+TGG + tig0020402:32550-32569 None:intergenic 50.0%
!! TGGGAGTGTTTGTGGTGTCA+TGG + tig0020402:32741-32760 None:intergenic 50.0%
GCCAGTGACGTTTCACCAAA+AGG + tig0020402:32957-32976 None:intergenic 50.0%
TTTGGGAAGGTGGTTCGAAG+AGG - tig0020402:33080-33099 Msa1380740:intron 50.0%
TAACATGTCAGTTGGCAGGC+CGG + tig0020402:33126-33145 None:intergenic 50.0%
GCCGATCGTAACATGTCAGT+TGG + tig0020402:33134-33153 None:intergenic 50.0%
ACTGACATGTTACGATCGGC+AGG - tig0020402:33134-33153 Msa1380740:intron 50.0%
!! GTGTATGGTGAGGGTTGGTT+CGG + tig0020402:33543-33562 None:intergenic 50.0%
ACGTTGTGTATGGTGAGGGT+TGG + tig0020402:33548-33567 None:intergenic 50.0%
TGGGACGTTGTGTATGGTGA+GGG + tig0020402:33552-33571 None:intergenic 50.0%
TTGGGACGTTGTGTATGGTG+AGG + tig0020402:33553-33572 None:intergenic 50.0%
GGGTGTCCCAAAGTGAAACT+TGG + tig0020402:33572-33591 None:intergenic 50.0%
CTAAAGCTTCTGGTGCAGTC+CGG + tig0020402:33656-33675 None:intergenic 50.0%
TTCTTTGTGGTGCAGACCAC+CGG + tig0020402:33680-33699 None:intergenic 50.0%
GGGGTTAAAAAACGTGTGGG+AGG + tig0020402:33769-33788 None:intergenic 50.0%
GAGGGGGGTTAAAAAACGTG+TGG + tig0020402:33773-33792 None:intergenic 50.0%
ACCCCCCTCCCCTATAAATA+TGG - tig0020402:33784-33803 Msa1380740:intron 50.0%
!! GGCCTCTTTGGAAAAGCATC+AGG - tig0020402:33899-33918 Msa1380740:intron 50.0%
! CCCCTGATGCTTTTCCAAAG+AGG + tig0020402:33904-33923 None:intergenic 50.0%
ATGATCGGTCAATAGGGTGG+GGG - tig0020402:33928-33947 Msa1380740:intron 50.0%
TGGGGGTCAGTTTGAATCTG+AGG - tig0020402:33945-33964 Msa1380740:intron 50.0%
!! GAATCTGAGGTTGGTTTGCC+TGG - tig0020402:33958-33977 Msa1380740:intron 50.0%
TGATGGTCAACATGACACCC+AGG + tig0020402:33979-33998 None:intergenic 50.0%
! GGGTGTCATGTTGACCATCA+TGG - tig0020402:33979-33998 Msa1380740:intron 50.0%
CTGATGAAGAGGAAAGAGGG+TGG + tig0020402:34086-34105 None:intergenic 50.0%
CCCTCTTTCCTCTTCATCAG+TGG - tig0020402:34086-34105 Msa1380740:intron 50.0%
GCCACTGATGAAGAGGAAAG+AGG + tig0020402:34090-34109 None:intergenic 50.0%
CTTTCCTCTTCATCAGTGGC+TGG - tig0020402:34090-34109 Msa1380740:intron 50.0%
AACTCCAGCCACTGATGAAG+AGG + tig0020402:34097-34116 None:intergenic 50.0%
TGAAAAAAATAGGGCGCGCG+AGG - tig0020402:34425-34444 Msa1380740:intron 50.0%
!! GGAAGATGAAAGCACCTCCA+AGG - tig0020402:29830-29849 Msa1380740:intron 50.0%
! TCTGGAACTTCACTCCTTGG+AGG + tig0020402:36500-36519 None:intergenic 50.0%
GTGGAGAAAAAGAAGCCAGC+AGG + tig0020402:36662-36681 None:intergenic 50.0%
TCCACTGCTTCTCAAGGAAG+TGG - tig0020402:36677-36696 Msa1380740:intron 50.0%
TTCTCAAGGAAGTGGCCAAG+AGG - tig0020402:36685-36704 Msa1380740:intron 50.0%
CCCCCTGATTACATCTTCCA+TGG + tig0020402:37253-37272 None:intergenic 50.0%
GAAGATGTAATCAGGGGGGA+AGG - tig0020402:37255-37274 Msa1380740:intron 50.0%
AAAAAAGGGTGGGGTAGCCT+TGG + tig0020402:37289-37308 None:intergenic 50.0%
!! ATTTAGGCTGGCTTCGCCAT+CGG - tig0020402:38023-38042 Msa1380740:CDS 50.0%
GAGATGGAAAAGGTGAAGGG+TGG - tig0020402:38193-38212 Msa1380740:CDS 50.0%
GTGAAGGGTGGATCACCATA+TGG - tig0020402:38205-38224 Msa1380740:CDS 50.0%
GGTGGATCACCATATGGTTC+AGG - tig0020402:38211-38230 Msa1380740:CDS 50.0%
AGCACTGCTTGTCAAGGAGG+TGG - tig0020402:30024-30043 Msa1380740:intron 55.0%
GCTGGAACTTATGCAGGGGA+TGG - tig0020402:30717-30736 Msa1380740:intron 55.0%
ATGATCAGGGATGCACCCTC+CGG - tig0020402:32170-32189 Msa1380740:intron 55.0%
CGGACTGCACCAGAAGCTTT+AGG - tig0020402:33654-33673 Msa1380740:intron 55.0%
!! CTGCACCAGAAGCTTTAGGC+CGG - tig0020402:33658-33677 Msa1380740:intron 55.0%
! TCTGTTGGTGGGGAGACAGA+GGG + tig0020402:34033-34052 None:intergenic 55.0%
! ATCTGTTGGTGGGGAGACAG+AGG + tig0020402:34034-34053 None:intergenic 55.0%
GGTGGGAGGAAAGAAGATGG+CGG + tig0020402:34068-34087 None:intergenic 55.0%
GAGGGTGGGAGGAAAGAAGA+TGG + tig0020402:34071-34090 None:intergenic 55.0%
TGAAGAGGAAAGAGGGTGGG+AGG + tig0020402:34082-34101 None:intergenic 55.0%
TCAGTGGCTGGAGTTAGAGC+TGG - tig0020402:34102-34121 Msa1380740:intron 55.0%
AAAATAGGGCGCGCGAGGAA+AGG - tig0020402:34430-34449 Msa1380740:intron 55.0%
AAAATAGGGCGCGCGAGGAA+AGG - tig0020402:34430-34449 Msa1380740:intron 55.0%
AAGGGGGCTGCATCTGTAGA+AGG - tig0020402:36168-36187 Msa1380740:intron 55.0%
ACACTTGCAGGAAAGCCTGC+TGG - tig0020402:36644-36663 Msa1380740:intron 55.0%
GCCACTTCCTTGAGAAGCAG+TGG + tig0020402:36681-36700 None:intergenic 55.0%
GGTGGCTCACCATATGGTGC+TGG - tig0020402:30699-30718 Msa1380740:intron 60.0%
!! TTTTGGGTGGGTGGGTGGGT+GGG + tig0020402:32045-32064 None:intergenic 60.0%
!!! TTTTTGGGTGGGTGGGTGGG+TGG + tig0020402:32046-32065 None:intergenic 60.0%
GCACGAGAAGGCCATAGGGT+GGG + tig0020402:32512-32531 None:intergenic 60.0%
AGGCGCACGAGAAGGCCATA+GGG + tig0020402:32516-32535 None:intergenic 60.0%
AAGGCGCACGAGAAGGCCAT+AGG + tig0020402:32517-32536 None:intergenic 60.0%
!! CACCAGAAGCTTTAGGCCGG+TGG - tig0020402:33661-33680 Msa1380740:intron 60.0%
GACCACCGGCCTAAAGCTTC+TGG + tig0020402:33666-33685 None:intergenic 60.0%
GTGTGGGAGGCCATCAATGC+CGG + tig0020402:33756-33775 None:intergenic 60.0%
! TGTTGGTGGGGAGACAGAGG+GGG + tig0020402:34031-34050 None:intergenic 60.0%
! CTGTTGGTGGGGAGACAGAG+GGG + tig0020402:34032-34051 None:intergenic 60.0%
GGAGTTAGAGCTGGAGCCAC+TGG - tig0020402:34111-34130 Msa1380740:intron 60.0%
! CGCGAGGAAAGGCATAGGGT+GGG - tig0020402:34441-34460 Msa1380740:intron 60.0%
! CGCGAGGAAAGGCATAGGGT+GGG - tig0020402:34441-34460 Msa1380740:intron 60.0%
TTTGGGTGGGTGGGTGGGTG+GGG + tig0020402:32044-32063 None:intergenic 65.0%
CGCACGAGAAGGCCATAGGG+TGG + tig0020402:32513-32532 None:intergenic 65.0%
! AGGGGGCACAGGGGTCTCTA+GGG + tig0020402:34014-34033 None:intergenic 65.0%
! GGCGCGCGAGGAAAGGCATA+GGG - tig0020402:34437-34456 Msa1380740:intron 65.0%
! GCGCGAGGAAAGGCATAGGG+TGG - tig0020402:34440-34459 Msa1380740:intron 65.0%
! GGCGCGCGAGGAAAGGCATA+GGG - tig0020402:34437-34456 Msa1380740:intron 65.0%
! GCGCGAGGAAAGGCATAGGG+TGG - tig0020402:34440-34459 Msa1380740:intron 65.0%
GGGGGAAGGGTAGTGTGCCA+AGG - tig0020402:37269-37288 Msa1380740:intron 65.0%
TTGGGTGGGTGGGTGGGTGG+GGG + tig0020402:32043-32062 None:intergenic 70.0%
! GAGGGGGCACAGGGGTCTCT+AGG + tig0020402:34015-34034 None:intergenic 70.0%
! GGGAGACAGAGGGGGCACAG+GGG + tig0020402:34023-34042 None:intergenic 70.0%
! GGGGAGACAGAGGGGGCACA+GGG + tig0020402:34024-34043 None:intergenic 70.0%
! TGGGGAGACAGAGGGGGCAC+AGG + tig0020402:34025-34044 None:intergenic 70.0%
! GGGCGCGCGAGGAAAGGCAT+AGG - tig0020402:34436-34455 Msa1380740:intron 70.0%
! GGGCGCGCGAGGAAAGGCAT+AGG - tig0020402:34436-34455 Msa1380740:intron 70.0%
TGGGTGGGTGGGTGGGTGGG+GGG + tig0020402:32042-32061 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0020402 gene 29327 38345 29327 ID=Msa1380740;Name=Msa1380740
tig0020402 mRNA 29327 38345 29327 ID=Msa1380740-mRNA-1;Parent=Msa1380740;Name=Msa1380740-mRNA-1;_AED=0.16;_eAED=0.17;_QI=0|0|0|1|0.57|0.37|8|0|393
tig0020402 exon 38191 38345 38191 ID=Msa1380740-mRNA-1:exon:7226;Parent=Msa1380740-mRNA-1
tig0020402 exon 37989 38082 37989 ID=Msa1380740-mRNA-1:exon:7225;Parent=Msa1380740-mRNA-1
tig0020402 exon 37767 37873 37767 ID=Msa1380740-mRNA-1:exon:7224;Parent=Msa1380740-mRNA-1
tig0020402 exon 37611 37748 37611 ID=Msa1380740-mRNA-1:exon:7223;Parent=Msa1380740-mRNA-1
tig0020402 exon 36843 37070 36843 ID=Msa1380740-mRNA-1:exon:7222;Parent=Msa1380740-mRNA-1
tig0020402 exon 31460 31553 31460 ID=Msa1380740-mRNA-1:exon:7221;Parent=Msa1380740-mRNA-1
tig0020402 exon 31068 31220 31068 ID=Msa1380740-mRNA-1:exon:7220;Parent=Msa1380740-mRNA-1
tig0020402 exon 29327 29539 29327 ID=Msa1380740-mRNA-1:exon:7219;Parent=Msa1380740-mRNA-1
tig0020402 CDS 38191 38345 38191 ID=Msa1380740-mRNA-1:cds;Parent=Msa1380740-mRNA-1
tig0020402 CDS 37989 38082 37989 ID=Msa1380740-mRNA-1:cds;Parent=Msa1380740-mRNA-1
tig0020402 CDS 37767 37873 37767 ID=Msa1380740-mRNA-1:cds;Parent=Msa1380740-mRNA-1
tig0020402 CDS 37611 37748 37611 ID=Msa1380740-mRNA-1:cds;Parent=Msa1380740-mRNA-1
tig0020402 CDS 36843 37070 36843 ID=Msa1380740-mRNA-1:cds;Parent=Msa1380740-mRNA-1
tig0020402 CDS 31460 31553 31460 ID=Msa1380740-mRNA-1:cds;Parent=Msa1380740-mRNA-1
tig0020402 CDS 31068 31220 31068 ID=Msa1380740-mRNA-1:cds;Parent=Msa1380740-mRNA-1
tig0020402 CDS 29327 29539 29327 ID=Msa1380740-mRNA-1:cds;Parent=Msa1380740-mRNA-1
Gene Sequence

>Msa1380740

ATGGAATTGGTTTTGTGTATAAAAATATGCAAGCTGCATACACTTCACGTTCACACTCACCAAGAACGCCCTTTTGGTTTCTATAGAGACAGAGAGAACAGAGCAGTTCAAGACTTCAAGTTACTAGCAGCAATGGCTACTAAAGTTTACATTGTCTACTATTCTATGTATGGACATGTTGGGAAGCTAGCTGAAGAGATCAAAAATGGAGTTGAATCCATAGAAGGTGTAGAAGCAAAACTCTGGCAGGTGCCTGAAATATTGCCAGAAGAGGTTCTTGGGAAGATGAAAGCACCTCCAAAGAGTGATGTTCCAATTATTTCAGCAAATGAGCTTCTTGAGGCTGATGGTTTTTTATTTGGAATGATGGCTACTCAATTCAAAGCATTTATGGATACAACTGGAGACCTATGGTGCACACAGAAACTTGCAGGAAAGCCTGCTGGCATCTTTTACAGCACTGCTTGTCAAGGAGGTGGTCAAGAAACTACACCGTTGACATCTATTACACAACTTGTTCACCATGGAATGATTTTTGTGCCCGTTGGATACACATTTGGTGCTGGAATGTTTGAGATAGAAAAGGTGAAAGGTGGCTCACCATATGGTGCTGGAACTTATGCAGGGGATGGCTCAAGACAGCCCACTGAATTAGAACTGGCTCAAGCTTTTCATCAAGGGAAATACTTTGCGGGAATTGCAAAGAAGCTCAAAGGGTCACATTACCATTCTGTGTACGGACATGTTGAGAAGCTAGCTGAAGAGATTCTAAAGGGGGCTGCATCTGTAGAAGGAGTAGAAGCAAAACTCTGGCAGGTACCAGAAATATTGTCTGAAGAAATCCTAAGGAAGATGAAAGCACCTCCAAGGAGTGAAGTTCCAGACATTTCACCTAAACAGCTTGCTGAAGCTGATGGTTTTTTGTTTGGTTTTCCAGCAAGATATGGAATGATGTCTGCTCAATTCAAACTTGTTCACCATGGTATGATTTTTGTACCTATTGGATACACATTTGGTGCTGGAATGTTTGAGATGGAAAAGGTGAAGGGTGGATCACCATATGGTTCAGGAACTTTTGGGGAACATGGAATAGGAGAACCTAGTGAGTTAGAATTGGCTCAAGCTTTTCATCAGGGAAAATACTTTGCTGGAATTGCAAAGAAGCTCAAAGGATCACAATGA

Protein sequence

>Msa1380740

MELVLCIKICKLHTLHVHTHQERPFGFYRDRENRAVQDFKLLAAMATKVYIVYYSMYGHVGKLAEEIKNGVESIEGVEAKLWQVPEILPEEVLGKMKAPPKSDVPIISANELLEADGFLFGMMATQFKAFMDTTGDLWCTQKLAGKPAGIFYSTACQGGGQETTPLTSITQLVHHGMIFVPVGYTFGAGMFEIEKVKGGSPYGAGTYAGDGSRQPTELELAQAFHQGKYFAGIAKKLKGSHYHSVYGHVEKLAEEILKGAASVEGVEAKLWQVPEILSEEILRKMKAPPRSEVPDISPKQLAEADGFLFGFPARYGMMSAQFKLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGSGTFGEHGIGEPSELELAQAFHQGKYFAGIAKKLKGSQ*