AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1359970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1359970 MtrunA17_Chr4g0062301 97.265 585 13 2 1 584 1 583 0.0 1175
Msa1359970 MtrunA17_Chr2g0307471 75.899 473 111 2 91 561 84 555 0.0 762
Msa1359970 MtrunA17_Chr4g0062321 97.845 232 5 0 185 416 4 235 1.23e-167 476
Msa1359970 MtrunA17_Chr8g0354761 44.056 429 217 8 121 538 31 447 2.36e-105 325
Msa1359970 MtrunA17_Chr5g0443991 41.395 430 241 6 117 541 95 518 4.97e-104 330
Msa1359970 MtrunA17_Chr2g0301281 36.797 587 260 19 81 560 17 599 1.59e-99 315
Msa1359970 MtrunA17_Chr4g0029191 36.797 587 260 19 86 573 32 606 4.39e-98 311
Msa1359970 MtrunA17_Chr4g0034411 39.168 457 257 9 99 541 69 518 1.24e-95 308
Msa1359970 MtrunA17_Chr3g0114081 35.608 469 277 10 94 541 10 474 3.63e-83 271
Msa1359970 MtrunA17_Chr4g0062331 99.115 113 1 0 415 527 3 115 1.08e-76 241
Msa1359970 MtrunA17_Chr8g0347161 33.140 516 302 16 55 542 51 551 2.37e-73 244
Msa1359970 MtrunA17_Chr6g0483491 41.243 354 198 6 97 448 9 354 3.31e-73 241
Msa1359970 MtrunA17_Chr8g0347151 35.394 469 266 14 94 541 197 649 4.52e-73 246
Msa1359970 MtrunA17_Chr7g0236841 40.678 354 200 6 97 448 9 354 8.05e-72 237
Msa1359970 MtrunA17_Chr8g0347171 35.147 441 254 11 91 513 153 579 1.24e-69 236
Msa1359970 MtrunA17_Chr8g0386451 31.301 492 308 13 71 541 254 736 2.57e-63 222
Msa1359970 MtrunA17_Chr2g0300291 31.828 465 299 10 50 508 94 546 8.06e-61 214
Msa1359970 MtrunA17_Chr2g0310581 33.813 417 249 10 67 475 31 428 1.43e-58 204
Msa1359970 MtrunA17_Chr3g0098121 34.054 370 234 6 95 461 149 511 1.92e-56 202
Msa1359970 MtrunA17_Chr2g0330401 32.800 375 228 11 97 461 95 455 1.43e-54 192
Msa1359970 MtrunA17_Chr2g0293631 33.528 343 220 5 98 438 496 832 1.12e-53 197
Msa1359970 MtrunA17_Chr1g0200181 33.994 353 212 9 98 438 145 488 2.17e-53 191
Msa1359970 MtrunA17_Chr4g0040761 32.698 367 229 9 98 458 19 373 2.31e-52 191
Msa1359970 MtrunA17_Chr6g0449911 32.558 344 222 6 98 438 165 501 3.31e-52 190
Msa1359970 MtrunA17_Chr7g0247191 30.846 402 252 8 37 438 104 479 1.62e-51 185
Msa1359970 MtrunA17_Chr1g0157691 33.240 358 210 11 97 438 146 490 2.04e-51 186
Msa1359970 MtrunA17_Chr7g0247221 31.017 403 250 9 37 438 97 472 5.69e-51 183
Msa1359970 MtrunA17_Chr3g0107851 33.155 374 223 10 97 451 116 481 1.11e-50 183
Msa1359970 MtrunA17_Chr7g0270131 33.058 363 234 6 98 457 232 588 1.27e-50 186
Msa1359970 MtrunA17_Chr7g0247181 30.769 403 251 9 37 438 94 469 1.94e-50 182
Msa1359970 MtrunA17_Chr3g0095031 31.818 374 230 12 86 448 76 435 7.08e-49 178
Msa1359970 MtrunA17_Chr2g0277821 33.333 381 224 13 98 464 504 868 7.61e-49 183
Msa1359970 MtrunA17_Chr5g0442191 31.726 394 234 14 82 462 69 440 2.22e-48 177
Msa1359970 MtrunA17_Chr3g0121351 31.401 414 243 12 66 448 105 508 8.92e-48 176
Msa1359970 MtrunA17_Chr4g0076491 28.513 491 285 15 19 463 196 666 2.95e-47 176
Msa1359970 MtrunA17_Chr7g0271121 31.373 357 232 6 111 462 119 467 3.71e-47 176
Msa1359970 MtrunA17_Chr4g0070981 31.989 372 225 11 97 459 40 392 1.13e-46 169
Msa1359970 MtrunA17_Chr2g0299681 31.536 371 226 11 97 458 40 391 3.02e-46 168
Msa1359970 MtrunA17_Chr1g0193491 33.731 335 206 8 116 442 132 458 3.13e-46 172
Msa1359970 MtrunA17_Chr6g0449741 28.337 487 276 15 23 463 167 626 3.27e-46 172
Msa1359970 MtrunA17_Chr2g0329931 31.806 371 225 11 97 458 40 391 2.04e-45 166
Msa1359970 MtrunA17_Chr4g0063551 30.846 402 247 11 99 475 141 536 8.92e-45 169
Msa1359970 MtrunA17_Chr1g0176041 30.048 416 250 11 55 448 120 516 1.71e-44 167
Msa1359970 MtrunA17_Chr6g0466611 32.546 381 222 15 90 448 137 504 3.38e-44 167
Msa1359970 MtrunA17_Chr8g0342861 31.267 371 227 11 97 458 40 391 2.28e-43 160
Msa1359970 MtrunA17_Chr7g0236831 29.245 424 230 10 98 454 163 583 1.20e-41 160
Msa1359970 MtrunA17_Chr2g0297261 27.177 379 252 9 92 463 28 389 2.42e-41 154
Msa1359970 MtrunA17_Chr4g0058591 33.333 321 193 8 98 409 202 510 3.28e-41 156
Msa1359970 MtrunA17_Chr3g0145781 25.862 406 258 9 91 463 125 520 1.57e-40 154
Msa1359970 MtrunA17_Chr4g0003441 30.352 369 236 11 89 450 99 453 1.72e-40 154
Msa1359970 MtrunA17_Chr5g0409981 32.628 331 210 6 116 438 120 445 4.30e-40 153
Msa1359970 MtrunA17_Chr5g0429221 31.624 351 216 8 97 437 2 338 1.23e-38 147
Msa1359970 MtrunA17_Chr6g0461751 31.362 389 238 17 76 450 117 490 1.35e-38 149
Msa1359970 MtrunA17_Chr7g0263771 30.312 353 226 12 112 459 147 484 6.49e-37 145
Msa1359970 MtrunA17_Chr6g0475251 27.126 494 315 15 98 571 103 571 6.51e-36 143
Msa1359970 MtrunA17_Chr1g0204391 29.040 396 244 11 98 466 44 429 1.38e-34 138
Msa1359970 MtrunA17_Chr4g0039471 38.000 200 116 3 98 295 223 416 1.97e-31 126
Msa1359970 MtrunA17_Chr4g0039471 32.161 199 86 5 98 294 2 153 9.68e-18 85.9
Msa1359970 MtrunA17_Chr1g0149251 28.931 318 213 9 136 450 2 309 6.83e-31 123
Msa1359970 MtrunA17_Chr2g0309551 25.470 479 292 13 54 478 72 539 2.69e-29 122
Msa1359970 MtrunA17_Chr1g0192021 24.021 383 249 7 98 439 26 407 2.78e-27 116
Msa1359970 MtrunA17_Chr4g0004301 25.307 407 227 11 111 448 42 440 2.92e-27 115
Msa1359970 MtrunA17_Chr5g0434301 25.245 408 226 12 111 448 42 440 1.95e-26 113
Msa1359970 MtrunA17_Chr1g0155201 31.660 259 151 7 223 475 13 251 2.70e-26 110
Msa1359970 MtrunA17_Chr8g0349951 42.208 154 84 2 98 251 10 158 2.77e-26 105
Msa1359970 MtrunA17_Chr1g0179761 28.000 425 248 17 95 479 77 483 1.35e-25 110
Msa1359970 MtrunA17_Chr4g0074521 28.732 355 212 11 114 438 98 441 1.67e-24 107
Msa1359970 MtrunA17_Chr1g0169331 25.469 373 235 11 116 454 9 372 5.10e-21 95.5
Msa1359970 MtrunA17_Chr0c30g0494091 34.595 185 102 6 114 286 98 275 1.27e-17 85.1
Msa1359970 MtrunA17_Chr8g0364251 31.282 195 107 5 98 274 91 276 2.10e-17 85.9
Msa1359970 MtrunA17_Chr8g0364251 33.835 133 84 4 347 477 437 567 1.74e-12 70.1
Msa1359970 MtrunA17_Chr4g0025131 33.690 187 108 7 76 259 40 213 2.47e-17 82.8
Msa1359970 MtrunA17_Chr8g0342851 25.444 338 204 12 127 458 2 297 2.63e-17 83.2
Msa1359970 MtrunA17_Chr6g0465771 24.454 229 161 6 81 304 75 296 5.74e-13 70.5
Msa1359970 MtrunA17_Chr3g0137891 29.878 164 105 7 136 296 2 158 7.91e-12 65.5
Msa1359970 MtrunA17_Chr0c09g0493491 24.017 229 162 6 81 304 75 296 1.97e-11 65.5
Msa1359970 MtrunA17_Chr3g0137901 29.139 151 95 4 304 450 3 145 2.41e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1359970 AT3G18600.1 61.982 555 195 4 28 572 13 561 0.0 683
Msa1359970 AT5G65900.1 63.113 469 169 3 91 558 148 613 0.0 627
Msa1359970 AT5G54910.1 41.031 446 255 6 99 541 73 513 2.23e-106 337
Msa1359970 AT2G40700.1 37.876 565 246 17 77 541 11 570 5.17e-97 308
Msa1359970 AT1G71370.1 36.404 456 271 9 99 542 16 464 9.15e-88 283
Msa1359970 AT5G05450.1 34.343 495 285 14 94 566 11 487 6.32e-81 266
Msa1359970 AT5G08620.1 31.868 546 339 14 18 545 3 533 2.46e-76 253
Msa1359970 AT5G60990.1 39.444 360 204 5 98 448 10 364 1.06e-70 235
Msa1359970 AT5G63630.1 34.292 452 270 11 77 513 35 474 1.18e-69 234
Msa1359970 AT5G63630.2 34.292 452 270 11 77 513 229 668 1.89e-68 235
Msa1359970 AT5G08610.1 33.049 469 285 12 94 545 379 835 2.17e-68 238
Msa1359970 AT1G16280.1 33.663 404 252 8 82 480 43 435 8.79e-62 212
Msa1359970 AT4G16630.1 35.849 371 224 7 96 461 166 527 8.77e-61 216
Msa1359970 AT5G63120.2 34.933 375 216 12 99 461 167 525 1.14e-59 209
Msa1359970 AT2G07750.1 31.944 504 287 19 67 539 345 823 2.74e-59 212
Msa1359970 AT1G63250.1 30.869 541 305 20 30 539 274 776 5.03e-58 208
Msa1359970 AT1G77030.1 34.795 365 222 9 99 458 30 383 8.29e-56 202
Msa1359970 AT3G01540.4 32.303 356 230 7 98 450 159 506 2.98e-55 197
Msa1359970 AT3G01540.2 32.303 356 230 7 98 450 159 506 2.98e-55 197
Msa1359970 AT3G01540.3 32.303 356 230 7 98 450 159 506 2.98e-55 197
Msa1359970 AT3G01540.1 32.303 356 230 7 98 450 159 506 3.02e-55 197
Msa1359970 AT3G06480.1 32.222 360 239 4 98 457 436 790 3.95e-53 196
Msa1359970 AT1G71280.1 37.838 333 158 9 99 417 17 314 4.84e-53 188
Msa1359970 AT4G33370.1 33.616 354 214 10 97 438 97 441 9.28e-53 189
Msa1359970 AT1G71280.2 37.500 328 156 8 99 412 17 309 2.55e-52 182
Msa1359970 AT1G20920.4 35.014 357 202 13 115 457 547 887 9.12e-52 192
Msa1359970 AT1G20920.6 35.014 357 202 13 115 457 547 887 9.12e-52 192
Msa1359970 AT1G20920.3 35.014 357 202 13 115 457 547 887 9.12e-52 192
Msa1359970 AT1G20920.7 35.014 357 202 13 115 457 547 887 9.12e-52 192
Msa1359970 AT1G20920.5 35.014 357 202 13 115 457 547 887 9.12e-52 192
Msa1359970 AT1G20920.1 35.014 357 202 13 115 457 547 887 9.12e-52 192
Msa1359970 AT5G51280.1 32.418 364 224 11 98 448 147 501 1.79e-51 186
Msa1359970 AT1G20920.2 34.807 362 210 12 115 464 209 556 3.83e-51 189
Msa1359970 AT1G55150.1 31.283 374 235 10 97 461 99 459 7.24e-51 183
Msa1359970 AT1G55150.2 31.283 374 235 10 97 461 124 484 1.61e-50 182
Msa1359970 AT4G00660.1 32.845 341 216 7 99 438 133 461 2.66e-50 181
Msa1359970 AT4G00660.2 32.845 341 216 7 99 438 133 461 2.66e-50 181
Msa1359970 AT5G14610.2 30.612 343 230 5 98 438 162 498 3.56e-50 184
Msa1359970 AT5G14610.6 30.612 343 230 5 98 438 162 498 3.62e-50 184
Msa1359970 AT2G47330.1 34.615 364 229 6 97 457 228 585 6.02e-50 185
Msa1359970 AT5G14610.5 30.612 343 230 5 98 438 170 506 6.72e-50 183
Msa1359970 AT5G14610.7 31.003 329 219 5 112 438 45 367 6.89e-49 178
Msa1359970 AT5G14610.3 31.003 329 219 5 112 438 45 367 6.89e-49 178
Msa1359970 AT1G31970.1 33.088 408 236 13 65 452 82 472 7.62e-49 178
Msa1359970 AT5G14610.1 30.145 345 233 5 96 438 228 566 8.30e-49 181
Msa1359970 AT5G63120.1 34.675 323 184 11 99 409 167 474 1.80e-48 176
Msa1359970 AT3G61240.2 30.380 395 257 8 44 438 78 454 1.88e-48 176
Msa1359970 AT3G61240.1 30.380 395 257 8 44 438 78 454 1.88e-48 176
Msa1359970 AT5G63120.3 34.675 323 184 11 99 409 167 474 2.04e-48 176
Msa1359970 AT5G63120.4 34.675 323 184 11 99 409 167 474 2.04e-48 176
Msa1359970 AT5G63120.5 34.675 323 184 11 99 409 167 474 2.04e-48 176
Msa1359970 AT3G22330.1 31.347 386 231 14 78 449 86 451 4.63e-48 177
Msa1359970 AT3G06980.1 29.327 416 250 11 81 463 358 762 1.08e-47 178
Msa1359970 AT3G22310.2 32.507 363 218 13 98 449 117 463 2.51e-47 175
Msa1359970 AT2G45810.1 29.032 403 256 8 37 438 111 484 2.61e-47 174
Msa1359970 AT3G22310.1 32.507 363 218 13 98 449 117 463 3.08e-47 175
Msa1359970 AT3G13920.1 32.286 350 212 9 97 438 39 371 1.78e-46 169
Msa1359970 AT3G13920.3 32.286 350 212 9 97 438 29 361 2.15e-46 168
Msa1359970 AT2G33730.1 29.087 471 284 16 19 450 223 682 2.68e-46 174
Msa1359970 AT3G13920.5 32.286 350 212 9 97 438 43 375 4.64e-46 168
Msa1359970 AT5G26742.1 30.919 359 233 7 98 449 103 453 4.76e-46 173
Msa1359970 AT5G26742.2 30.919 359 233 7 98 449 103 453 4.79e-46 173
Msa1359970 AT3G13920.2 32.286 350 212 9 97 438 39 371 5.33e-46 167
Msa1359970 AT3G06480.2 32.087 321 214 3 98 418 436 752 3.98e-45 171
Msa1359970 AT4G09730.1 31.602 462 237 19 97 523 112 529 5.22e-45 169
Msa1359970 AT3G19760.1 27.720 386 265 8 80 463 18 391 1.11e-44 164
Msa1359970 AT3G09620.1 31.738 397 210 14 115 493 414 767 1.15e-44 171
Msa1359970 AT3G09620.2 31.738 397 210 14 115 493 415 768 1.19e-44 171
Msa1359970 AT1G54270.1 31.214 346 221 7 97 438 39 371 1.90e-44 163
Msa1359970 AT1G51380.1 28.455 369 252 8 76 442 1 359 2.09e-44 162
Msa1359970 AT3G13920.4 32.000 350 208 10 97 438 39 366 2.55e-44 162
Msa1359970 AT3G58570.1 29.976 417 266 10 51 448 100 509 3.02e-44 167
Msa1359970 AT1G72730.1 31.335 367 224 11 97 454 41 388 3.77e-44 162
Msa1359970 AT2G42520.2 31.707 369 228 9 98 448 160 522 4.48e-44 166
Msa1359970 AT2G42520.1 31.707 369 228 9 98 448 160 522 4.48e-44 166
Msa1359970 AT2G42520.3 31.707 369 228 9 98 448 160 522 4.48e-44 166
Msa1359970 AT3G58510.1 31.328 399 250 11 81 463 135 525 6.43e-44 166
Msa1359970 AT3G58510.3 31.328 399 250 11 81 463 135 525 6.43e-44 166
Msa1359970 AT3G58510.2 31.328 399 250 11 81 463 135 525 6.43e-44 166
Msa1359970 AT5G14610.4 29.755 326 219 6 98 421 170 487 6.59e-43 161
Msa1359970 AT1G54270.2 30.790 367 229 10 97 458 39 385 2.40e-42 157
Msa1359970 AT5G26742.3 31.498 327 209 7 130 449 42 360 3.45e-42 161
Msa1359970 AT1G28180.1 31.609 348 212 11 127 463 3 335 1.12e-40 152
Msa1359970 AT5G11170.1 29.730 370 237 11 89 450 38 392 1.81e-40 152
Msa1359970 AT5G11200.1 29.730 370 237 11 89 450 38 392 1.81e-40 152
Msa1359970 AT3G09720.2 30.595 353 225 8 112 459 156 493 2.15e-38 149
Msa1359970 AT3G09720.1 30.595 353 225 8 112 459 156 493 2.15e-38 149
Msa1359970 AT3G02065.3 30.387 362 233 12 98 450 111 462 7.84e-37 144
Msa1359970 AT3G02065.2 30.387 362 233 12 98 450 111 462 7.84e-37 144
Msa1359970 AT5G62190.1 32.370 346 190 11 116 438 115 439 1.35e-36 145
Msa1359970 AT3G02065.1 30.838 334 212 12 126 450 2 325 3.13e-35 136
Msa1359970 AT3G16840.1 27.423 423 228 9 98 448 191 606 7.66e-35 140
Msa1359970 AT3G16840.2 27.423 423 228 9 98 448 192 607 8.49e-35 140
Msa1359970 AT5G11200.3 27.073 410 237 12 89 450 38 433 1.06e-33 134
Msa1359970 AT5G11170.2 29.412 323 205 11 136 450 2 309 6.39e-32 127
Msa1359970 AT4G15850.1 25.000 416 230 11 104 448 38 442 3.59e-29 122
Msa1359970 AT1G12770.2 25.622 402 240 9 91 438 104 500 3.64e-28 119
Msa1359970 AT1G12770.1 25.622 402 240 9 91 438 104 500 3.64e-28 119
Msa1359970 AT1G51380.2 27.915 283 190 8 76 357 1 270 7.24e-27 110
Msa1359970 AT3G53110.1 28.061 392 252 14 66 438 60 440 1.30e-25 110
Msa1359970 AT4G34910.1 26.076 395 234 11 95 439 44 430 1.70e-25 111
Msa1359970 AT1G51380.4 28.326 233 159 5 76 308 1 225 1.47e-24 104
Msa1359970 AT1G51380.3 28.326 233 159 5 76 308 1 225 2.27e-24 104
Msa1359970 AT5G19210.2 26.496 351 223 9 114 438 93 434 9.42e-24 105
Msa1359970 AT5G11200.2 24.824 427 243 12 89 450 38 451 3.65e-23 103
Msa1359970 AT1G59990.2 29.744 195 109 4 98 274 81 265 1.80e-16 83.2
Msa1359970 AT1G59990.2 33.981 103 66 2 346 447 425 526 1.77e-12 70.5
Msa1359970 AT1G59990.1 29.744 195 109 4 98 274 81 265 1.88e-16 83.2
Msa1359970 AT1G59990.1 33.981 103 66 2 346 447 425 526 1.69e-12 70.5
Msa1359970 AT1G28180.2 40.336 119 57 3 127 237 3 115 1.12e-15 73.9

Find 118 sgRNAs with CRISPR-Local

Find 434 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTAAAGCTATTATGGATA+TGG 0.201270 tig0016871:-13075 Msa1359970:CDS
CAAACTCTTGGATTGGTTAT+AGG 0.204342 tig0016871:-11628 Msa1359970:CDS
TCCGTGTGCCAAGCGATTTA+TGG 0.222353 tig0016871:-9773 Msa1359970:CDS
GAAGCTTGAAGATTGATTTC+TGG 0.224963 tig0016871:+13389 None:intergenic
AAATACTTCTAAAGCTATTA+TGG 0.236781 tig0016871:-13081 Msa1359970:CDS
CTGCATTGTGTAGGAGAATT+TGG 0.238966 tig0016871:-7633 Msa1359970:intron
TTCAATCCTAACAATCCTTA+TGG 0.244240 tig0016871:-6458 Msa1359970:CDS
AGCTACTCCTGGTCGTCTTC+TGG 0.259983 tig0016871:-11548 Msa1359970:CDS
TACTAGAGAGCTTGCCATTC+AGG 0.264185 tig0016871:-12393 Msa1359970:intron
CGCTTTCCATAAGGATTGTT+AGG 0.285269 tig0016871:+6452 None:intergenic
TTGCATTGTTCAAGTATTTA+CGG 0.308414 tig0016871:-9646 Msa1359970:CDS
CGAAGAAATTGCAATTCTTC+AGG 0.311901 tig0016871:+8412 None:intergenic
TACAAATGAAGGGTTGCTTC+AGG 0.327909 tig0016871:-9809 Msa1359970:CDS
TTAAGTGGAAAAGATGTTCT+TGG 0.330209 tig0016871:-12530 Msa1359970:CDS
ATGTCATTGGTTTCATTCAT+TGG 0.337901 tig0016871:+13362 None:intergenic
CTCCACAGCAGGAATTAAAA+AGG 0.340723 tig0016871:+12475 None:intergenic
TGATGAAGCTGACAGGATAT+TGG 0.342235 tig0016871:-10783 Msa1359970:CDS
ATTGCAATTCTTCAGGAATC+AGG 0.344105 tig0016871:+8419 None:intergenic
TCTAAAGCTATTATGGATAT+GGG 0.370226 tig0016871:-13074 Msa1359970:CDS
AGAATGGAGGGCTATTATTC+AGG 0.372766 tig0016871:+6246 None:intergenic
TGACTTCTGCCAAGCAGAAA+AGG 0.401736 tig0016871:-9587 Msa1359970:CDS
TAAATGCAGGTTACAAATGA+AGG 0.404353 tig0016871:-9820 Msa1359970:intron
TTTATGTTTAGACTCACATT+TGG 0.413125 tig0016871:+6533 None:intergenic
AAGAAAACTCGTAGAGTTGA+TGG 0.420262 tig0016871:-6494 Msa1359970:CDS
AAATCGTATCAATTCATTCA+TGG 0.425977 tig0016871:-13417 Msa1359970:exon
GGTGCTGCAAGGACAGGTTC+TGG 0.426669 tig0016871:-12509 Msa1359970:CDS
TGACGTTGCTGCTCGTGGAC+TGG 0.429959 tig0016871:-9548 Msa1359970:CDS
GGTAATACCTTTGGTTCATC+AGG 0.442016 tig0016871:+8593 None:intergenic
CATCGTCGTTCACAAACTCT+TGG 0.444793 tig0016871:-11640 Msa1359970:CDS
TTTAATCAGCGAAGTGGAAC+CGG 0.448896 tig0016871:-12434 Msa1359970:CDS
TGTTGAAGTAGAAACTGAAT+TGG 0.452657 tig0016871:-13180 Msa1359970:CDS
TCGGCATTTCGCTTTCCATA+AGG 0.452668 tig0016871:+6443 None:intergenic
ATCTATATTGATGTAGATGA+TGG 0.455624 tig0016871:-9931 Msa1359970:CDS
GCAATTTCTTCGATATTTGA+AGG 0.458420 tig0016871:-8401 Msa1359970:intron
GACTTCTGCCAAGCAGAAAA+GGG 0.459324 tig0016871:-9586 Msa1359970:CDS
AAAGAAGAAGAAGAATAAAG+AGG 0.461045 tig0016871:-13213 Msa1359970:CDS
AAGCCGAAAACCTTGCTAAA+GGG 0.465942 tig0016871:-11585 Msa1359970:CDS
TCATCTACATCAATATAGAT+AGG 0.467553 tig0016871:+9934 None:intergenic
AGTCAACGAAAGTAGTTGTC+CGG 0.467875 tig0016871:+9605 None:intergenic
TGAATGGCAAGCTCTCTAGT+AGG 0.473774 tig0016871:+12395 None:intergenic
GTTCTTGGTGCTGCAAGGAC+AGG 0.475002 tig0016871:-12515 Msa1359970:CDS
TTCAGCTACACAAACAAAGA+AGG 0.476116 tig0016871:-10228 Msa1359970:intron
TCATAAGCATATTCTTTCAC+AGG 0.477953 tig0016871:+7770 None:intergenic
AGAACAGCTCGTGGGGAAGA+TGG 0.479615 tig0016871:-8463 Msa1359970:CDS
CGATTGATGCCTCTTCAAGA+AGG 0.481280 tig0016871:+9741 None:intergenic
TGTTCAACGCCTTGATATGC+AGG 0.485964 tig0016871:-7516 Msa1359970:intron
CCTCTTCTTCAACGATATCA+CGG 0.490214 tig0016871:+13294 None:intergenic
GTTATTATATATGAATCTCT+TGG 0.495139 tig0016871:+11510 None:intergenic
TTTGACTAGGTTACAAAACC+TGG 0.500323 tig0016871:+6337 None:intergenic
CTCTTCTTCAACGATATCAC+GGG 0.502203 tig0016871:+13295 None:intergenic
ACAAACTAAAATCATAAGAA+TGG 0.502540 tig0016871:+6230 None:intergenic
ATGTTTAGACTCACATTTGG+AGG 0.506185 tig0016871:+6536 None:intergenic
CCGTGATATCGTTGAAGAAG+AGG 0.506881 tig0016871:-13294 Msa1359970:CDS
ATGCTTATTTCAGGAAGCTA+AGG 0.511820 tig0016871:-7795 Msa1359970:intron
AGTATCATTCACAATCTCTT+CGG 0.513681 tig0016871:+13265 None:intergenic
ACAAATGAAGGGTTGCTTCA+GGG 0.513911 tig0016871:-9808 Msa1359970:CDS
GATATTGGAAGCAAACTTTG+AGG 0.513948 tig0016871:-10768 Msa1359970:CDS
CACAAACTGCCGCTTATCAT+CGG 0.519919 tig0016871:+6424 None:intergenic
TTGTGCAAAAGCTCCACAGC+AGG 0.521372 tig0016871:+12464 None:intergenic
TCGTTCACAAACTCTTGGAT+TGG 0.522756 tig0016871:-11635 Msa1359970:CDS
GAAGCCGAAAACCTTGCTAA+AGG 0.523689 tig0016871:-11586 Msa1359970:CDS
TTCTCTATTCCTTCTTGAAG+AGG 0.524704 tig0016871:-9750 Msa1359970:CDS
GAAAACAAAAGCAGCAGACC+CGG 0.525268 tig0016871:-9624 Msa1359970:CDS
TGTACTGACGTTGCTGCTCG+TGG 0.527420 tig0016871:-9553 Msa1359970:CDS
CTTAAGTTTAATCAGCGAAG+TGG 0.532154 tig0016871:-12440 Msa1359970:CDS
CACGAAATATAATACCTGAA+TGG 0.534469 tig0016871:+12379 None:intergenic
TGCTAAAGGGATAAATATAG+TGG 0.536538 tig0016871:-11572 Msa1359970:CDS
AATATAGTGGTAGCTACTCC+TGG 0.538374 tig0016871:-11559 Msa1359970:CDS
AGAGTTGTACCTGCATATCA+AGG 0.540807 tig0016871:+7507 None:intergenic
GTCAACGAAAGTAGTTGTCC+GGG 0.543236 tig0016871:+9606 None:intergenic
TCATTATTGATGAAGCTGAC+AGG 0.543290 tig0016871:-10790 Msa1359970:CDS
ACTCTTGGATTGGTTATAGG+AGG 0.548432 tig0016871:-11625 Msa1359970:CDS
ACCATAAATCGCTTGGCACA+CGG 0.549270 tig0016871:+9772 None:intergenic
ACTAAAATCATAAGAATGGA+GGG 0.553494 tig0016871:+6234 None:intergenic
TAGGCGTCGTCTGAAATGAC+AGG 0.554626 tig0016871:+9953 None:intergenic
ATATGCTTATGATGAAAAGA+AGG 0.556774 tig0016871:-7759 Msa1359970:CDS
ATATGTTGACTAATTTGACT+AGG 0.560573 tig0016871:+6324 None:intergenic
AGAGTTGATGGAAGCAGACA+TGG 0.562166 tig0016871:-6482 Msa1359970:CDS
AGCGAAATGCCGATGATAAG+CGG 0.563676 tig0016871:-6433 Msa1359970:CDS
AAAGATGAATATACCACAGA+AGG 0.563723 tig0016871:+9520 None:intergenic
ATAGAGAACCATAAATCGCT+TGG 0.565362 tig0016871:+9765 None:intergenic
GCTACCAGGAATATATCCAC+AGG 0.567728 tig0016871:-8492 Msa1359970:intron
ATACCTTTGGTTCATCAGGC+GGG 0.568243 tig0016871:+8597 None:intergenic
AACTAAAATCATAAGAATGG+AGG 0.573155 tig0016871:+6233 None:intergenic
AGATGATCCAGAAGACGACC+AGG 0.575827 tig0016871:+11541 None:intergenic
GAATGGCAAGCTCTCTAGTA+GGG 0.575964 tig0016871:+12396 None:intergenic
ATTATTCAGGTACAAGAATG+TGG 0.577801 tig0016871:+6259 None:intergenic
TGTTTAGACTCACATTTGGA+GGG 0.580998 tig0016871:+6537 None:intergenic
GCTCGTGGGGAAGATGGAAA+AGG 0.582255 tig0016871:-8457 Msa1359970:CDS
TCTATATTGATGTAGATGAT+GGG 0.584233 tig0016871:-9930 Msa1359970:CDS
TGGACTGGACATACCTTCTG+TGG 0.588376 tig0016871:-9533 Msa1359970:intron
AATACCTTTGGTTCATCAGG+CGG 0.590706 tig0016871:+8596 None:intergenic
TGTCAGCTTCATCAATAATG+AGG 0.592059 tig0016871:+10792 None:intergenic
GTACAATTCACATTCTTCGA+AGG 0.594754 tig0016871:-7549 Msa1359970:CDS
CTATATTTATCCCTTTAGCA+AGG 0.596514 tig0016871:+11575 None:intergenic
ACATAAACGTCAACAAGCAA+AGG 0.600961 tig0016871:-6517 Msa1359970:CDS
GATTATCAAGCTCCTCCCAA+AGG 0.603313 tig0016871:-10732 Msa1359970:intron
AAATGCAGGTTACAAATGAA+GGG 0.605072 tig0016871:-9819 Msa1359970:intron
GGGATTTCAACACTTAACTC+AGG 0.606168 tig0016871:-13054 Msa1359970:intron
CATAAGCATATTCTTTCACA+GGG 0.611214 tig0016871:+7771 None:intergenic
AAGATGTTCTTGGTGCTGCA+AGG 0.611755 tig0016871:-12520 Msa1359970:CDS
TGTAGATGATGGGAGAAAGA+AGG 0.614453 tig0016871:-9920 Msa1359970:intron
GAATGTGGAAACATGTCCAA+TGG 0.617571 tig0016871:+6274 None:intergenic
GGCAAACATACAGTCTCACC+TGG 0.629346 tig0016871:-7735 Msa1359970:intron
GGGTCGGTAGAACAGCTCGT+GGG 0.631763 tig0016871:-8471 Msa1359970:CDS
GGTCGGTAGAACAGCTCGTG+GGG 0.635198 tig0016871:-8470 Msa1359970:CDS
ATTCATATATAATAACCTGA+AGG 0.639902 tig0016871:-11503 Msa1359970:intron
AGGGTCGGTAGAACAGCTCG+TGG 0.641878 tig0016871:-8472 Msa1359970:CDS
ACTTCTGCCAAGCAGAAAAG+GGG 0.643574 tig0016871:-9585 Msa1359970:CDS
CTATTTCTTTAAGACACACG+AGG 0.651535 tig0016871:-11686 Msa1359970:intron
CAGGAATATATCCACAGGGT+CGG 0.652697 tig0016871:-8487 Msa1359970:CDS
CATTCAACAGAACAGACAGA+CGG 0.653581 tig0016871:-10258 Msa1359970:intron
TGCTTATGATGAAAAGAAGG+TGG 0.654571 tig0016871:-7756 Msa1359970:CDS
CGACCCGCCTGATGAACCAA+AGG 0.655236 tig0016871:-8600 Msa1359970:intron
GAGCTGTTCTACCGACCCTG+TGG 0.670503 tig0016871:+8476 None:intergenic
CTACCAGGAATATATCCACA+GGG 0.673275 tig0016871:-8491 Msa1359970:intron
TCATTATAGATACCTTTGGG+AGG 0.674048 tig0016871:+10720 None:intergenic
AGGGCATATGACAACAACAC+CGG 0.711466 tig0016871:+12415 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATTAAAATATGTTTG+TGG - tig0016871:7322-7341 Msa1359970:intron 10.0%
!! TAAAATTAAAATATGTTTGT+GGG - tig0016871:7323-7342 Msa1359970:intron 10.0%
!! GTGAAAATTTAAATATTAAA+AGG + tig0016871:7593-7612 None:intergenic 10.0%
!!! TTGGATTTTATATTTAATTA+AGG + tig0016871:8337-8356 None:intergenic 10.0%
!!! AAATTAGATTAAATAACTTT+TGG + tig0016871:9431-9450 None:intergenic 10.0%
!!! ATTTTTATATTGTTTTATGT+GGG + tig0016871:10334-10353 None:intergenic 10.0%
!!! AATTTTTATATTGTTTTATG+TGG + tig0016871:10335-10354 None:intergenic 10.0%
!!! GAATAATTTTTTACAAAAAT+AGG + tig0016871:11744-11763 None:intergenic 10.0%
!!! AAATTATTTTTTGAACAAAA+TGG - tig0016871:11992-12011 Msa1359970:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0016871:8900-8919 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0016871:8900-8919 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0016871:8900-8919 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0016871:8900-8919 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + tig0016871:8900-8919 None:intergenic 100.0%
!! AAAAAAGTGAAAAATAACAA+AGG - tig0016871:6443-6462 Msa1359970:CDS 15.0%
!! AATACATTATCATTAGAAAA+GGG + tig0016871:6612-6631 None:intergenic 15.0%
!! TAATACATTATCATTAGAAA+AGG + tig0016871:6613-6632 None:intergenic 15.0%
!!! GAAATATATTCATATTTTAG+TGG + tig0016871:8163-8182 None:intergenic 15.0%
!! TTAATAAATCTAGTAGAAAT+CGG + tig0016871:10142-10161 None:intergenic 15.0%
!! ACTATCAACTTAATAAATTT+GGG + tig0016871:11268-11287 None:intergenic 15.0%
!!! AGAAAGTATCTAAATAAAAA+GGG - tig0016871:11308-11327 Msa1359970:intron 15.0%
!!! TTATATTTTATGCTTATTTC+AGG - tig0016871:11791-11810 Msa1359970:intron 15.0%
!! TAAAATTCTATTAAAACACA+AGG + tig0016871:11899-11918 None:intergenic 15.0%
!!! TCATTAACTTTTATTCAATT+AGG - tig0016871:13413-13432 Msa1359970:exon 15.0%
!!! AAATACTTCTAAAGCTATTA+TGG - tig0016871:6514-6533 Msa1359970:CDS 20.0%
!! TCATTTATGAAAATTCCATA+CGG - tig0016871:7432-7451 Msa1359970:intron 20.0%
!! AAGATAATTTCAACTTATAC+AGG - tig0016871:7671-7690 Msa1359970:intron 20.0%
!!! GTTATTCTTTCTATTCTTTT+AGG - tig0016871:7813-7832 Msa1359970:intron 20.0%
!! GTTATTATATATGAATCTCT+TGG + tig0016871:8088-8107 None:intergenic 20.0%
!! ATTCATATATAATAACCTGA+AGG - tig0016871:8092-8111 Msa1359970:intron 20.0%
!! TGAGTTTATATTATCTTTCT+TGG + tig0016871:8356-8375 None:intergenic 20.0%
!!! AGATAATCTGAAACATTTTA+AGG - tig0016871:8392-8411 Msa1359970:intron 20.0%
!! TGTATGCAAATTCTTATAAT+TGG + tig0016871:9454-9473 None:intergenic 20.0%
!!! ACAAGTTTCTTTGTTTAATT+TGG - tig0016871:9471-9490 Msa1359970:intron 20.0%
!!! TCTTTGTTTAATTTGGAATT+TGG - tig0016871:9478-9497 Msa1359970:intron 20.0%
!!! CTTTGTTTAATTTGGAATTT+GGG - tig0016871:9479-9498 Msa1359970:intron 20.0%
!!! TGAAATACATCAGTAATTTT+TGG - tig0016871:9515-9534 Msa1359970:intron 20.0%
!! AAGACTATGATAAATTTAAG+TGG + tig0016871:9709-9728 None:intergenic 20.0%
!!! CTCTTATACTTATTTTCTTT+AGG + tig0016871:10214-10233 None:intergenic 20.0%
!! AAGTGAGTAAATATTAACAA+AGG - tig0016871:10235-10254 Msa1359970:CDS 20.0%
!! ATTAACAAAGGATACAATAT+CGG - tig0016871:10247-10266 Msa1359970:CDS 20.0%
!! AAAATTAGAATCTTCAGTAA+AGG - tig0016871:10349-10368 Msa1359970:intron 20.0%
!! CTTAAAGATTTGATCTAATA+AGG - tig0016871:10757-10776 Msa1359970:CDS 20.0%
!! CACAATAGTTCATTTAAATT+TGG + tig0016871:10877-10896 None:intergenic 20.0%
!!! TGTTGATTGAAAATCATTAA+AGG - tig0016871:10916-10935 Msa1359970:intron 20.0%
!! ATATAAAACTGCTAAGAAAA+AGG + tig0016871:11053-11072 None:intergenic 20.0%
!! CACTATCAACTTAATAAATT+TGG + tig0016871:11269-11288 None:intergenic 20.0%
!!! GAGAAAGTATCTAAATAAAA+AGG - tig0016871:11307-11326 Msa1359970:intron 20.0%
!! TGATTTAAATTATCAAGTAG+AGG + tig0016871:12201-12220 None:intergenic 20.0%
!!! AATTTTGATTAAAAGCTTCA+AGG - tig0016871:12252-12271 Msa1359970:intron 20.0%
!! GATGAACTTATCTTAAAAAA+TGG + tig0016871:12411-12430 None:intergenic 20.0%
!!! TCCTTGTTTTATTTTAATAG+TGG - tig0016871:12677-12696 Msa1359970:intron 20.0%
!! TCCACTATTAAAATAAAACA+AGG + tig0016871:12681-12700 None:intergenic 20.0%
!!! AAATTCTACCAAAACTTTTT+GGG + tig0016871:13231-13250 None:intergenic 20.0%
!!! AAAATTCTACCAAAACTTTT+TGG + tig0016871:13232-13251 None:intergenic 20.0%
!! ACAAACTAAAATCATAAGAA+TGG + tig0016871:13368-13387 None:intergenic 20.0%
! AAATCGTATCAATTCATTCA+TGG - tig0016871:6178-6197 Msa1359970:three_prime_UTR 25.0%
!!! CTTCTTCTTTTTCTTTTTTG+AGG + tig0016871:6372-6391 None:intergenic 25.0%
! AAAGAAGAAGAAGAATAAAG+AGG - tig0016871:6382-6401 Msa1359970:three_prime_UTR 25.0%
!!! TTCTAAAGCTATTATGGATA+TGG - tig0016871:6520-6539 Msa1359970:CDS 25.0%
!! TCTAAAGCTATTATGGATAT+GGG - tig0016871:6521-6540 Msa1359970:CDS 25.0%
!!! AGATAAATTAGACCTTGTTT+TGG - tig0016871:6669-6688 Msa1359970:intron 25.0%
!! GTTTATAGCTTGTATAAAAG+TGG + tig0016871:6806-6825 None:intergenic 25.0%
!!! CTCTTTTTCATAAGCTATTA+TGG - tig0016871:6825-6844 Msa1359970:intron 25.0%
!! ATATACCCATAAGATGTTTT+CGG + tig0016871:6869-6888 None:intergenic 25.0%
!!! TAAGTTTTAGATGTCCAATT+TGG - tig0016871:7361-7380 Msa1359970:intron 25.0%
! ATCTTGTTGAAAAAATTGTG+AGG + tig0016871:7570-7589 None:intergenic 25.0%
!! TTTCTGAAAATATTGCGATT+TGG - tig0016871:7648-7667 Msa1359970:intron 25.0%
!!! GAGTTTTAGTGTTTTAGATA+AGG - tig0016871:8205-8224 Msa1359970:intron 25.0%
!!! TTTAGTGTTTTAGATAAGGA+AGG - tig0016871:8209-8228 Msa1359970:intron 25.0%
! TAGAACTACTACTATAAATG+TGG + tig0016871:8304-8323 None:intergenic 25.0%
! ACATTTATAGTAGTAGTTCT+AGG - tig0016871:8303-8322 Msa1359970:intron 25.0%
! AATGTTTCAGATTATCTCTT+AGG + tig0016871:8389-8408 None:intergenic 25.0%
! TGCATATATTAGTGTAGATT+TGG - tig0016871:8739-8758 Msa1359970:intron 25.0%
! GCATATATTAGTGTAGATTT+GGG - tig0016871:8740-8759 Msa1359970:intron 25.0%
! ATATAGTTGTACTAACTCTA+TGG + tig0016871:9091-9110 None:intergenic 25.0%
!!! GAGCTCGTATTTTTAAATTA+CGG - tig0016871:9183-9202 Msa1359970:intron 25.0%
! TTATTGAAGCAAAATCAAAC+AGG + tig0016871:9244-9263 None:intergenic 25.0%
! TCATCTACATCAATATAGAT+AGG + tig0016871:9664-9683 None:intergenic 25.0%
! ATCTATATTGATGTAGATGA+TGG - tig0016871:9664-9683 Msa1359970:CDS 25.0%
! TCTATATTGATGTAGATGAT+GGG - tig0016871:9665-9684 Msa1359970:CDS 25.0%
! TTGCATTGTTCAAGTATTTA+CGG - tig0016871:9949-9968 Msa1359970:CDS 25.0%
! TTAACAAAGGATACAATATC+GGG - tig0016871:10248-10267 Msa1359970:CDS 25.0%
! CAGGAAAAATTTATCTTCTT+AGG + tig0016871:10438-10457 None:intergenic 25.0%
!! TGTAATGCTTTTGTGAATAA+TGG + tig0016871:10599-10618 None:intergenic 25.0%
! TATCTAGATTTGTATATCCA+TGG - tig0016871:10839-10858 Msa1359970:intron 25.0%
! TTTGGTTAAATGTTAAACCA+TGG + tig0016871:10859-10878 None:intergenic 25.0%
!! TTCTCTCTTATTTATGTTGT+AGG - tig0016871:10956-10975 Msa1359970:intron 25.0%
! ATACATAAGTCACAATACTT+AGG + tig0016871:11435-11454 None:intergenic 25.0%
!! TTTCACATTTTAGACAATAG+TGG + tig0016871:11478-11497 None:intergenic 25.0%
! ATATGCTTATGATGAAAAGA+AGG - tig0016871:11836-11855 Msa1359970:intron 25.0%
! ATTATCAAGTAGAGGAATAA+GGG + tig0016871:12193-12212 None:intergenic 25.0%
! AATTATCAAGTAGAGGAATA+AGG + tig0016871:12194-12213 None:intergenic 25.0%
! TAATTTAAATCACCTGTTAC+TGG - tig0016871:12209-12228 Msa1359970:intron 25.0%
! AATTTAAATCACCTGTTACT+GGG - tig0016871:12210-12229 Msa1359970:intron 25.0%
!!! CATGATGTTATCTTTTAACT+AGG + tig0016871:12380-12399 None:intergenic 25.0%
! TGAGTTAGATCTGAAAAAAT+TGG - tig0016871:12469-12488 Msa1359970:CDS 25.0%
! GAGTTAGATCTGAAAAAATT+GGG - tig0016871:12470-12489 Msa1359970:CDS 25.0%
! AGTTAGATCTGAAAAAATTG+GGG - tig0016871:12471-12490 Msa1359970:CDS 25.0%
!! CTGAATGAAATCAATTTTCT+GGG + tig0016871:12639-12658 None:intergenic 25.0%
!! TCTGAATGAAATCAATTTTC+TGG + tig0016871:12640-12659 None:intergenic 25.0%
!!! TTTTAATAGTGGAAGAAACA+CGG - tig0016871:12688-12707 Msa1359970:intron 25.0%
! GGAAAAGAATGAATTATTTC+AGG - tig0016871:12709-12728 Msa1359970:intron 25.0%
! TCAGGATATTCATTTATTTC+AGG - tig0016871:12727-12746 Msa1359970:intron 25.0%
! AAATGAAAAGATGATTTCTC+CGG + tig0016871:12804-12823 None:intergenic 25.0%
! TTGGAATATAGCATATTTGA+AGG + tig0016871:12865-12884 None:intergenic 25.0%
! TTTATGTTTAGACTCACATT+TGG + tig0016871:13065-13084 None:intergenic 25.0%
!! ATATGTTGACTAATTTGACT+AGG + tig0016871:13274-13293 None:intergenic 25.0%
!! AGATCAAAATTTTGTACCAT+TGG - tig0016871:13305-13324 Msa1359970:CDS 25.0%
! ACTAAAATCATAAGAATGGA+GGG + tig0016871:13364-13383 None:intergenic 25.0%
! AACTAAAATCATAAGAATGG+AGG + tig0016871:13365-13384 None:intergenic 25.0%
!! ATGTCATTGGTTTCATTCAT+TGG + tig0016871:6236-6255 None:intergenic 30.0%
AGTATCATTCACAATCTCTT+CGG + tig0016871:6333-6352 None:intergenic 30.0%
TGTTGAAGTAGAAACTGAAT+TGG - tig0016871:6415-6434 Msa1359970:CDS 30.0%
GTGAAAAATAACAAAGGTTC+TGG - tig0016871:6449-6468 Msa1359970:CDS 30.0%
TTAAGCTGTATACCAAAACA+AGG + tig0016871:6684-6703 None:intergenic 30.0%
!! GTTTTCGGCTTGTTTATATA+AGG + tig0016871:6854-6873 None:intergenic 30.0%
TTCTTAAGTAGAGTAGACTA+TGG - tig0016871:6951-6970 Msa1359970:intron 30.0%
TCTTAAGTAGAGTAGACTAT+GGG - tig0016871:6952-6971 Msa1359970:intron 30.0%
ATAACAAATCAAGCACAAAC+TGG + tig0016871:7010-7029 None:intergenic 30.0%
! ACATCTTTTCCACTTAAAAG+TGG + tig0016871:7062-7081 None:intergenic 30.0%
TTAAGTGGAAAAGATGTTCT+TGG - tig0016871:7065-7084 Msa1359970:intron 30.0%
CACGAAATATAATACCTGAA+TGG + tig0016871:7219-7238 None:intergenic 30.0%
!! TCCAATTTGGACTAGTTTAT+AGG - tig0016871:7374-7393 Msa1359970:intron 30.0%
AGCAAAGAAAAGAAACAGTT+TGG + tig0016871:7775-7794 None:intergenic 30.0%
AGAAAGAATAACGAAATCTG+AGG + tig0016871:7805-7824 None:intergenic 30.0%
CAGCAAATAATCAGCAAATA+AGG + tig0016871:7884-7903 None:intergenic 30.0%
CTATATTTATCCCTTTAGCA+AGG + tig0016871:8023-8042 None:intergenic 30.0%
TGCTAAAGGGATAAATATAG+TGG - tig0016871:8023-8042 Msa1359970:intron 30.0%
ATATATTTCATTGCTGATGC+TGG - tig0016871:8174-8193 Msa1359970:intron 30.0%
!! AAAACTTTGACTTGTAATCG+TGG - tig0016871:8249-8268 Msa1359970:intron 30.0%
ATGAGCATCAAACATTAATG+TGG + tig0016871:8553-8572 None:intergenic 30.0%
TCTTGAAAATAGTAGATGCA+TGG - tig0016871:8715-8734 Msa1359970:intron 30.0%
CAAAGAAATCAGGAATGTAA+GGG + tig0016871:8777-8796 None:intergenic 30.0%
TCAAAGAAATCAGGAATGTA+AGG + tig0016871:8778-8797 None:intergenic 30.0%
GCATCATTATAGATACCTTT+GGG + tig0016871:8881-8900 None:intergenic 30.0%
! TTATTGAAGTCCTTTTTGCT+AGG + tig0016871:9037-9056 None:intergenic 30.0%
TATTCTACCTAAAAGTCTGT+TGG - tig0016871:9110-9129 Msa1359970:intron 30.0%
! AAATTACGGCCAACAATTTT+AGG - tig0016871:9197-9216 Msa1359970:intron 30.0%
TGTTCTTAACTGATGTATGT+GGG - tig0016871:9292-9311 Msa1359970:intron 30.0%
! CATATTTTCCCTCAAATTCT+AGG - tig0016871:9603-9622 Msa1359970:CDS 30.0%
ATCTTCAACCTAGAATTTGA+GGG + tig0016871:9614-9633 None:intergenic 30.0%
TAAATGCAGGTTACAAATGA+AGG - tig0016871:9775-9794 Msa1359970:CDS 30.0%
AAATGCAGGTTACAAATGAA+GGG - tig0016871:9776-9795 Msa1359970:CDS 30.0%
TGTGATTAAAAATGTCTGCA+TGG + tig0016871:9924-9943 None:intergenic 30.0%
AAAGATGAATATACCACAGA+AGG + tig0016871:10078-10097 None:intergenic 30.0%
TGACTTTATACTCGATACTA+GGG + tig0016871:10170-10189 None:intergenic 30.0%
TAACAAAGGATACAATATCG+GGG - tig0016871:10249-10268 Msa1359970:CDS 30.0%
GCACATTGTATTGTGAAATT+TGG + tig0016871:10528-10547 None:intergenic 30.0%
TCTAGATAAATACACACACA+TGG + tig0016871:10827-10846 None:intergenic 30.0%
! TCTTATTTATGTTGTAGGAC+TGG - tig0016871:10961-10980 Msa1359970:intron 30.0%
ACTGCTAAGAAAAAGGATTA+CGG + tig0016871:11046-11065 None:intergenic 30.0%
GCAATTTCTTCGATATTTGA+AGG - tig0016871:11194-11213 Msa1359970:intron 30.0%
TCAGTTTCTCTCATTAAAGT+AGG - tig0016871:11217-11236 Msa1359970:intron 30.0%
CAGTTTCTCTCATTAAAGTA+GGG - tig0016871:11218-11237 Msa1359970:intron 30.0%
AGTTTCTCTCATTAAAGTAG+GGG - tig0016871:11219-11238 Msa1359970:intron 30.0%
AAAAGAGTCTAATCTGTTGT+TGG - tig0016871:11365-11384 Msa1359970:intron 30.0%
ACTTAATGTTCTGTAAGGTA+AGG + tig0016871:11412-11431 None:intergenic 30.0%
TTAGGACTTAATGTTCTGTA+AGG + tig0016871:11417-11436 None:intergenic 30.0%
TGTGACTTATGTATGAAACA+TGG - tig0016871:11441-11460 Msa1359970:intron 30.0%
CATAAGCATATTCTTTCACA+GGG + tig0016871:11827-11846 None:intergenic 30.0%
TCATAAGCATATTCTTTCAC+AGG + tig0016871:11828-11847 None:intergenic 30.0%
TGATTAAAAGCTTCAAGGAT+AGG - tig0016871:12257-12276 Msa1359970:intron 30.0%
GATTAAAAGCTTCAAGGATA+GGG - tig0016871:12258-12277 Msa1359970:intron 30.0%
ATTAAAAGCTTCAAGGATAG+GGG - tig0016871:12259-12278 Msa1359970:intron 30.0%
GATTCTCTACCTTTACTATT+TGG - tig0016871:12498-12517 Msa1359970:CDS 30.0%
CTAAAGTCACCAAATAGTAA+AGG + tig0016871:12510-12529 None:intergenic 30.0%
! GTATTTTGTAGATAGATCGA+TGG - tig0016871:12531-12550 Msa1359970:CDS 30.0%
AGTGAGAAAGTTAAGTTAAG+CGG - tig0016871:12575-12594 Msa1359970:intron 30.0%
! TGAAATCAATTTTCTGGGTT+GGG + tig0016871:12634-12653 None:intergenic 30.0%
! ATGAAATCAATTTTCTGGGT+TGG + tig0016871:12635-12654 None:intergenic 30.0%
ACAAATATGATACTTCTCTC+TGG + tig0016871:12935-12954 None:intergenic 30.0%
CTCAAAGTATAGAAACAAAC+TGG + tig0016871:13006-13025 None:intergenic 30.0%
!! TTTGTTTCTATACTTTGAGC+AGG - tig0016871:13007-13026 Msa1359970:intron 30.0%
TTCAATCCTAACAATCCTTA+TGG - tig0016871:13137-13156 Msa1359970:CDS 30.0%
!!! CCAAAACTTTTTGGGTATAA+TGG + tig0016871:13223-13242 None:intergenic 30.0%
! CCATTATACCCAAAAAGTTT+TGG - tig0016871:13220-13239 Msa1359970:CDS 30.0%
! TGGTAGAATTTTATACAACC+AGG - tig0016871:13240-13259 Msa1359970:CDS 30.0%
ATTATTCAGGTACAAGAATG+TGG + tig0016871:13339-13358 None:intergenic 30.0%
! GAAGCTTGAAGATTGATTTC+TGG + tig0016871:6209-6228 None:intergenic 35.0%
!! CTTGCTTTTGTTCATGTCAT+TGG + tig0016871:6249-6268 None:intergenic 35.0%
AACAAGCCGAAAACATCTTA+TGG - tig0016871:6860-6879 Msa1359970:intron 35.0%
ACAAGCCGAAAACATCTTAT+GGG - tig0016871:6861-6880 Msa1359970:intron 35.0%
TATGCGTGGTACATTAGAAA+TGG - tig0016871:6978-6997 Msa1359970:intron 35.0%
! TCTTTTCCACTTAAAAGTGG+TGG + tig0016871:7059-7078 None:intergenic 35.0%
CTTAAGTTTAATCAGCGAAG+TGG - tig0016871:7155-7174 Msa1359970:intron 35.0%
GCCTATAAACTAGTCCAAAT+TGG + tig0016871:7378-7397 None:intergenic 35.0%
!! ATTTGGACTAGTTTATAGGC+TGG - tig0016871:7378-7397 Msa1359970:intron 35.0%
AAACTGTAAACTTCTCCGTA+TGG + tig0016871:7450-7469 None:intergenic 35.0%
TCATTACTTCACAACAAGAC+TGG + tig0016871:7615-7634 None:intergenic 35.0%
!! CTATTTCTTTAAGACACACG+AGG - tig0016871:7909-7928 Msa1359970:intron 35.0%
!! CAAACTCTTGGATTGGTTAT+AGG - tig0016871:7967-7986 Msa1359970:intron 35.0%
! TATCCCTTTAGCAAGGTTTT+CGG + tig0016871:8016-8035 None:intergenic 35.0%
ACAACTCATAATCTACCTTC+AGG + tig0016871:8110-8129 None:intergenic 35.0%
GATCGCAGGAAAATAATGTA+TGG + tig0016871:8426-8445 None:intergenic 35.0%
TTAATGTTTGATGCTCATCG+AGG - tig0016871:8555-8574 Msa1359970:intron 35.0%
ATTCTTCATTTGTCCTTCAG+TGG - tig0016871:8691-8710 Msa1359970:intron 35.0%
TGTCAGCTTCATCAATAATG+AGG + tig0016871:8806-8825 None:intergenic 35.0%
TCATTATTGATGAAGCTGAC+AGG - tig0016871:8805-8824 Msa1359970:intron 35.0%
GATATTGGAAGCAAACTTTG+AGG - tig0016871:8827-8846 Msa1359970:intron 35.0%
TCATTATAGATACCTTTGGG+AGG + tig0016871:8878-8897 None:intergenic 35.0%
GGCATCATTATAGATACCTT+TGG + tig0016871:8882-8901 None:intergenic 35.0%
! TTCAAAGCCAACAGACTTTT+AGG + tig0016871:9120-9139 None:intergenic 35.0%
ACATCTCAGCCTAAAATTGT+TGG + tig0016871:9209-9228 None:intergenic 35.0%
GTGTTCTTAACTGATGTATG+TGG - tig0016871:9291-9310 Msa1359970:intron 35.0%
TTCAGCTACACAAACAAAGA+AGG - tig0016871:9367-9386 Msa1359970:intron 35.0%
GATCTTCAACCTAGAATTTG+AGG + tig0016871:9615-9634 None:intergenic 35.0%
GCATTTATGAGTTTCTTCTC+AGG + tig0016871:9762-9781 None:intergenic 35.0%
GAGAAGAAACTCATAAATGC+AGG - tig0016871:9762-9781 Msa1359970:CDS 35.0%
ATAGAGAACCATAAATCGCT+TGG + tig0016871:9833-9852 None:intergenic 35.0%
TTCTCTATTCCTTCTTGAAG+AGG - tig0016871:9845-9864 Msa1359970:intron 35.0%
GCATCAATCGAAAAAAGTGA+TGG - tig0016871:9867-9886 Msa1359970:intron 35.0%
GACTTTATACTCGATACTAG+GGG + tig0016871:10169-10188 None:intergenic 35.0%
CTGACTTTATACTCGATACT+AGG + tig0016871:10171-10190 None:intergenic 35.0%
ACCTCCAGAAAAAGAAACAT+TGG - tig0016871:10288-10307 Msa1359970:intron 35.0%
! TCCAATGTTTCTTTTTCTGG+AGG + tig0016871:10292-10311 None:intergenic 35.0%
! TGCTCCAATGTTTCTTTTTC+TGG + tig0016871:10295-10314 None:intergenic 35.0%
TCATTTAACTGCGCAGTTAA+TGG + tig0016871:10414-10433 None:intergenic 35.0%
AGAAGAACAGGTAATACCTT+TGG + tig0016871:11014-11033 None:intergenic 35.0%
! ATGCATTTTATTCTGCTACC+AGG - tig0016871:11089-11108 Msa1359970:intron 35.0%
ATTGCAATTCTTCAGGAATC+AGG + tig0016871:11179-11198 None:intergenic 35.0%
CGAAGAAATTGCAATTCTTC+AGG + tig0016871:11186-11205 None:intergenic 35.0%
! CAACAGATTAGACTCTTTTC+TGG + tig0016871:11364-11383 None:intergenic 35.0%
GGTTTAATGTTAAGACTAGC+CGG - tig0016871:11386-11405 Msa1359970:intron 35.0%
! GACATGAGGAAGGTATAATT+TGG - tig0016871:11596-11615 Msa1359970:CDS 35.0%
! AATGCTACACCTCTGATTTT+AGG + tig0016871:11629-11648 None:intergenic 35.0%
TGCCTAGAGTACATGATAAA+TGG - tig0016871:11674-11693 Msa1359970:CDS 35.0%
GCCTAGAGTACATGATAAAT+GGG - tig0016871:11675-11694 Msa1359970:CDS 35.0%
TCCCATTTATCATGTACTCT+AGG + tig0016871:11679-11698 None:intergenic 35.0%
ATGCTTATTTCAGGAAGCTA+AGG - tig0016871:11800-11819 Msa1359970:intron 35.0%
TGCTTATGATGAAAAGAAGG+TGG - tig0016871:11839-11858 Msa1359970:intron 35.0%
CAAGGAAGAAAGAATATACC+AGG + tig0016871:11881-11900 None:intergenic 35.0%
TTTGTAACATAAGCTGCAGT+TGG + tig0016871:11935-11954 None:intergenic 35.0%
AACTGCAGCTTATGTTACAA+AGG - tig0016871:11934-11953 Msa1359970:intron 35.0%
GTACAATTCACATTCTTCGA+AGG - tig0016871:12046-12065 Msa1359970:intron 35.0%
ATATAAGAGTTCCCAGTAAC+AGG + tig0016871:12224-12243 None:intergenic 35.0%
AAGGATAGGGGTAAAATGAA+TGG - tig0016871:12271-12290 Msa1359970:intron 35.0%
GGGTAAAATGAATGGTTGAT+TGG - tig0016871:12279-12298 Msa1359970:intron 35.0%
CTGAACACAATTAATCAGAG+CGG - tig0016871:12315-12334 Msa1359970:intron 35.0%
TTGTAGATCTAGATAGAGAC+TGG - tig0016871:12433-12452 Msa1359970:CDS 35.0%
ATCTAGATAGAGACTGGAAA+GGG - tig0016871:12439-12458 Msa1359970:CDS 35.0%
GATCTGAAAAAATTGGGGAA+AGG - tig0016871:12476-12495 Msa1359970:CDS 35.0%
GTGAGAAAGTTAAGTTAAGC+GGG - tig0016871:12576-12595 Msa1359970:intron 35.0%
CAGCTTTCACTGAGAATTTA+TGG + tig0016871:12828-12847 None:intergenic 35.0%
CATAGTACTTGATGCATGTT+TGG + tig0016871:12884-12903 None:intergenic 35.0%
CAAACATGCATCAAGTACTA+TGG - tig0016871:12882-12901 Msa1359970:intron 35.0%
TGTTTAGACTCACATTTGGA+GGG + tig0016871:13061-13080 None:intergenic 35.0%
ATGTTTAGACTCACATTTGG+AGG + tig0016871:13062-13081 None:intergenic 35.0%
ACATAAACGTCAACAAGCAA+AGG - tig0016871:13078-13097 Msa1359970:CDS 35.0%
AAGAAAACTCGTAGAGTTGA+TGG - tig0016871:13101-13120 Msa1359970:CDS 35.0%
TTTGACTAGGTTACAAAACC+TGG + tig0016871:13261-13280 None:intergenic 35.0%
CTCTTCTTCAACGATATCAC+GGG + tig0016871:6303-6322 None:intergenic 40.0%
CCTCTTCTTCAACGATATCA+CGG + tig0016871:6304-6323 None:intergenic 40.0%
GGGATTTCAACACTTAACTC+AGG - tig0016871:6541-6560 Msa1359970:CDS 40.0%
! TAGACTATGGGTTATATGCG+TGG - tig0016871:6964-6983 Msa1359970:intron 40.0%
!! TGCCTTTTTAATTCCTGCTG+TGG - tig0016871:7118-7137 Msa1359970:intron 40.0%
CTCCACAGCAGGAATTAAAA+AGG + tig0016871:7123-7142 None:intergenic 40.0%
TTTAATCAGCGAAGTGGAAC+CGG - tig0016871:7161-7180 Msa1359970:intron 40.0%
! CTTATCGTGAACTTTGCTGT+TGG - tig0016871:7246-7265 Msa1359970:intron 40.0%
TCGTTCACAAACTCTTGGAT+TGG - tig0016871:7960-7979 Msa1359970:intron 40.0%
!! ACTCTTGGATTGGTTATAGG+AGG - tig0016871:7970-7989 Msa1359970:intron 40.0%
! TTTAGCAAGGTTTTCGGCTT+CGG + tig0016871:8010-8029 None:intergenic 40.0%
AAGCCGAAAACCTTGCTAAA+GGG - tig0016871:8010-8029 Msa1359970:intron 40.0%
AATATAGTGGTAGCTACTCC+TGG - tig0016871:8036-8055 Msa1359970:intron 40.0%
TAGATAAGGAAGGAGAGAAG+AGG - tig0016871:8219-8238 Msa1359970:intron 40.0%
AGTACTAGATGTAAGATCGC+AGG + tig0016871:8440-8459 None:intergenic 40.0%
!! CTATTTTCAAGAGCCACTGA+AGG + tig0016871:8707-8726 None:intergenic 40.0%
TGATGAAGCTGACAGGATAT+TGG - tig0016871:8812-8831 Msa1359970:intron 40.0%
ACGAGCCTGTGAAATTATAG+CGG - tig0016871:8943-8962 Msa1359970:intron 40.0%
! TCCAACCCATTTTCCTTACA+AGG - tig0016871:8987-9006 Msa1359970:intron 40.0%
! CCAACCCATTTTCCTTACAA+GGG - tig0016871:8988-9007 Msa1359970:intron 40.0%
CCAACCCTTGTAAGGAAAAT+GGG + tig0016871:8995-9014 None:intergenic 40.0%
TCCAACCCTTGTAAGGAAAA+TGG + tig0016871:8996-9015 None:intergenic 40.0%
! CCTTTTTGCTAGGTGTTTTC+CGG + tig0016871:9027-9046 None:intergenic 40.0%
TGTAAGATGCTTCTTGCAGT+TGG - tig0016871:9140-9159 Msa1359970:intron 40.0%
TTAACTGATGTATGTGGGCT+TGG - tig0016871:9297-9316 Msa1359970:intron 40.0%
CATTCAACAGAACAGACAGA+CGG - tig0016871:9337-9356 Msa1359970:intron 40.0%
CGAAAGAACTAGACAGAAGA+TGG + tig0016871:9408-9427 None:intergenic 40.0%
TTGATACTCGATTGTGAGAG+CGG - tig0016871:9554-9573 Msa1359970:CDS 40.0%
!! TGTAGATGATGGGAGAAAGA+AGG - tig0016871:9675-9694 Msa1359970:CDS 40.0%
TACAAATGAAGGGTTGCTTC+AGG - tig0016871:9786-9805 Msa1359970:CDS 40.0%
ACAAATGAAGGGTTGCTTCA+GGG - tig0016871:9787-9806 Msa1359970:CDS 40.0%
AGTCAACGAAAGTAGTTGTC+CGG + tig0016871:9993-10012 None:intergenic 40.0%
!!! TGACACTGCATCTTTTTTGC+AGG + tig0016871:10457-10476 None:intergenic 40.0%
ATGCAGTGTCAAAGCTATAG+TGG - tig0016871:10466-10485 Msa1359970:intron 40.0%
TTTGATCTAATAAGGCGACC+AGG - tig0016871:10765-10784 Msa1359970:CDS 40.0%
! AATCCCAACTTTGGAAATCC+TGG + tig0016871:10786-10805 None:intergenic 40.0%
! AATACCTTTGGTTCATCAGG+CGG + tig0016871:11002-11021 None:intergenic 40.0%
! GGTAATACCTTTGGTTCATC+AGG + tig0016871:11005-11024 None:intergenic 40.0%
CGGCTCATTAATAGAAGAAC+AGG + tig0016871:11026-11045 None:intergenic 40.0%
AATGCTATGAAGACCTGTCA+TGG - tig0016871:11332-11351 Msa1359970:intron 40.0%
AATGTTCTGTAAGGTAAGGC+CGG + tig0016871:11408-11427 None:intergenic 40.0%
CACGAGGTATAAGTGATGTA+CGG - tig0016871:11550-11569 Msa1359970:CDS 40.0%
ACGAGGTATAAGTGATGTAC+GGG - tig0016871:11551-11570 Msa1359970:CDS 40.0%
TATAAGTGATGTACGGGTGT+TGG - tig0016871:11557-11576 Msa1359970:CDS 40.0%
CTCTAGGCATGAAACTCTTA+CGG + tig0016871:11663-11682 None:intergenic 40.0%
AAAAATAGGGACAGAGTCCT+GGG + tig0016871:11730-11749 None:intergenic 40.0%
AAGGAACTTCTGCATTGTGT+AGG - tig0016871:11953-11972 Msa1359970:intron 40.0%
CTGCATTGTGTAGGAGAATT+TGG - tig0016871:11962-11981 Msa1359970:intron 40.0%
AGAGTTGTACCTGCATATCA+AGG + tig0016871:12091-12110 None:intergenic 40.0%
AGCGGCAACACATAGATTAA+AGG - tig0016871:12333-12352 Msa1359970:intron 40.0%
GATCTAGATAGAGACTGGAA+AGG - tig0016871:12438-12457 Msa1359970:CDS 40.0%
AGTTAAGTTAAGCGGGAGAT+AGG - tig0016871:12583-12602 Msa1359970:intron 40.0%
GTTAAGTTAAGCGGGAGATA+GGG - tig0016871:12584-12603 Msa1359970:intron 40.0%
CGCTTTCCATAAGGATTGTT+AGG + tig0016871:13146-13165 None:intergenic 40.0%
GAATGTGGAAACATGTCCAA+TGG + tig0016871:13324-13343 None:intergenic 40.0%
AGAATGGAGGGCTATTATTC+AGG + tig0016871:13352-13371 None:intergenic 40.0%
CCGTGATATCGTTGAAGAAG+AGG - tig0016871:6301-6320 Msa1359970:three_prime_UTR 45.0%
!! GCGATTCCACCACTTTTAAG+TGG - tig0016871:7050-7069 Msa1359970:intron 45.0%
!! AAGATGTTCTTGGTGCTGCA+AGG - tig0016871:7075-7094 Msa1359970:intron 45.0%
AGGGCATATGACAACAACAC+CGG + tig0016871:7183-7202 None:intergenic 45.0%
GAATGGCAAGCTCTCTAGTA+GGG + tig0016871:7202-7221 None:intergenic 45.0%
TGAATGGCAAGCTCTCTAGT+AGG + tig0016871:7203-7222 None:intergenic 45.0%
TACTAGAGAGCTTGCCATTC+AGG - tig0016871:7202-7221 Msa1359970:intron 45.0%
AATATGTTTGTGGGTGTGCG+TGG - tig0016871:7332-7351 Msa1359970:intron 45.0%
CATCGTCGTTCACAAACTCT+TGG - tig0016871:7955-7974 Msa1359970:intron 45.0%
GAAGCCGAAAACCTTGCTAA+AGG - tig0016871:8009-8028 Msa1359970:intron 45.0%
GGACAATCTACGAGAAATGC+TGG + tig0016871:8532-8551 None:intergenic 45.0%
TCCTCTCACATGGACATCTT+TGG - tig0016871:8578-8597 Msa1359970:intron 45.0%
!! GAGGCACTGTCAAAGAAATC+AGG + tig0016871:8787-8806 None:intergenic 45.0%
GATTATCAAGCTCCTCCCAA+AGG - tig0016871:8863-8882 Msa1359970:intron 45.0%
AGCCTGTGAAATTATAGCGG+TGG - tig0016871:8946-8965 Msa1359970:intron 45.0%
CACCACCGCTATAATTTCAC+AGG + tig0016871:8951-8970 None:intergenic 45.0%
CCCTTGTAAGGAAAATGGGT+TGG + tig0016871:8991-9010 None:intergenic 45.0%
! CCCATTTTCCTTACAAGGGT+TGG - tig0016871:8992-9011 Msa1359970:intron 45.0%
TCAGTCATCCAACCCTTGTA+AGG + tig0016871:9003-9022 None:intergenic 45.0%
CCGGAAAACACCTAGCAAAA+AGG - tig0016871:9024-9043 Msa1359970:intron 45.0%
! GCAGTTGGCTTAAAAATGCC+TGG - tig0016871:9155-9174 Msa1359970:intron 45.0%
GGCTTAAAAATGCCTGGTCT+TGG - tig0016871:9161-9180 Msa1359970:intron 45.0%
AAAATACGAGCTCCAAGACC+AGG + tig0016871:9176-9195 None:intergenic 45.0%
ACCATAAATCGCTTGGCACA+CGG + tig0016871:9826-9845 None:intergenic 45.0%
CGATTGATGCCTCTTCAAGA+AGG + tig0016871:9857-9876 None:intergenic 45.0%
GAAAACAAAAGCAGCAGACC+CGG - tig0016871:9971-9990 Msa1359970:CDS 45.0%
GTCAACGAAAGTAGTTGTCC+GGG + tig0016871:9992-10011 None:intergenic 45.0%
TGACTTCTGCCAAGCAGAAA+AGG - tig0016871:10008-10027 Msa1359970:intron 45.0%
GACTTCTGCCAAGCAGAAAA+GGG - tig0016871:10009-10028 Msa1359970:intron 45.0%
ACTTCTGCCAAGCAGAAAAG+GGG - tig0016871:10010-10029 Msa1359970:intron 45.0%
!!! TCTTTTTCTGGAGGTGTCGT+AGG + tig0016871:10283-10302 None:intergenic 45.0%
ACCAGAAATACCTAGCTGCT+GGG - tig0016871:10618-10637 Msa1359970:intron 45.0%
CGACCAGGATTTCCAAAGTT+GGG - tig0016871:10780-10799 Msa1359970:CDS 45.0%
CTACGCAAGAATCCCAACTT+TGG + tig0016871:10795-10814 None:intergenic 45.0%
! ATACCTTTGGTTCATCAGGC+GGG + tig0016871:11001-11020 None:intergenic 45.0%
CTATGAAGACCTGTCATGGT+CGG - tig0016871:11336-11355 Msa1359970:intron 45.0%
TATGAAGACCTGTCATGGTC+GGG - tig0016871:11337-11356 Msa1359970:intron 45.0%
! TGTTGGTGTCCAATGTGTGT+CGG - tig0016871:11574-11593 Msa1359970:CDS 45.0%
!! GGTGTCACTCCTAAAATCAG+AGG - tig0016871:11617-11636 Msa1359970:CDS 45.0%
AAAATAGGGACAGAGTCCTG+GGG + tig0016871:11729-11748 None:intergenic 45.0%
CAAAAATAGGGACAGAGTCC+TGG + tig0016871:11731-11750 None:intergenic 45.0%
TGTTCAACGCCTTGATATGC+AGG - tig0016871:12079-12098 Msa1359970:intron 45.0%
!! AGAGTTGATGGAAGCAGACA+TGG - tig0016871:13113-13132 Msa1359970:CDS 45.0%
TCGGCATTTCGCTTTCCATA+AGG + tig0016871:13155-13174 None:intergenic 45.0%
AGCGAAATGCCGATGATAAG+CGG - tig0016871:13162-13181 Msa1359970:CDS 45.0%
! CACAAACTGCCGCTTATCAT+CGG + tig0016871:13174-13193 None:intergenic 45.0%
!!! AATAATTTTTTACAAAAATA+GGG + tig0016871:11743-11762 None:intergenic 5.0%
!! TATAAAAAAAATTAAGATTT+GGG + tig0016871:11776-11795 None:intergenic 5.0%
!! ATATAAAAAAAATTAAGATT+TGG + tig0016871:11777-11796 None:intergenic 5.0%
!!! AATAGAATTTTATTTATTAT+AGG - tig0016871:11907-11926 Msa1359970:intron 5.0%
TTGTGCAAAAGCTCCACAGC+AGG + tig0016871:7134-7153 None:intergenic 50.0%
AGATGATCCAGAAGACGACC+AGG + tig0016871:8057-8076 None:intergenic 50.0%
GCCAAAGATGTCCATGTGAG+AGG + tig0016871:8582-8601 None:intergenic 50.0%
TCGTGCATGACAGAAAGGGA+GGG + tig0016871:8927-8946 None:intergenic 50.0%
AGGCTCGTGCATGACAGAAA+GGG + tig0016871:8931-8950 None:intergenic 50.0%
CAAGGGTTGGATGACTGAAC+CGG - tig0016871:9005-9024 Msa1359970:intron 50.0%
! TAGGCGTCGTCTGAAATGAC+AGG + tig0016871:9645-9664 None:intergenic 50.0%
TCCGTGTGCCAAGCGATTTA+TGG - tig0016871:9822-9841 Msa1359970:intron 50.0%
! GCAAGATCCCCTTTTCTGCT+TGG + tig0016871:10020-10039 None:intergenic 50.0%
! TGGACTGGACATACCTTCTG+TGG - tig0016871:10062-10081 Msa1359970:intron 50.0%
!! TTCTGGAGGTGTCGTAGGTT+AGG + tig0016871:10278-10297 None:intergenic 50.0%
ACTGCGCAGTTAATGGTTGC+AGG + tig0016871:10407-10426 None:intergenic 50.0%
CACCAGAAATACCTAGCTGC+TGG - tig0016871:10617-10636 Msa1359970:intron 50.0%
TCCCAGCAGCTAGGTATTTC+TGG + tig0016871:10622-10641 None:intergenic 50.0%
AATACCTAGCTGCTGGGAGA+TGG - tig0016871:10624-10643 Msa1359970:intron 50.0%
AGGTAAGTGGCTACCAGTCT+CGG - tig0016871:10648-10667 Msa1359970:intron 50.0%
GCGACCAGGATTTCCAAAGT+TGG - tig0016871:10779-10798 Msa1359970:CDS 50.0%
GTGTGTGTGTGTGTGTGTGT+GGG + tig0016871:11517-11536 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG + tig0016871:11516-11535 None:intergenic 50.0%
TCCAATGTGTGTCGGACATG+AGG - tig0016871:11582-11601 Msa1359970:CDS 50.0%
TCCTCATGTCCGACACACAT+TGG + tig0016871:11586-11605 None:intergenic 50.0%
ATGTGTGTCGGACATGAGGA+AGG - tig0016871:11586-11605 Msa1359970:CDS 50.0%
GGCAAACATACAGTCTCACC+TGG - tig0016871:11860-11879 Msa1359970:intron 50.0%
AAACGCCCCTGTGTATTGAG+TGG - tig0016871:12774-12793 Msa1359970:intron 50.0%
GCCTACCACTCAATACACAG+GGG + tig0016871:12782-12801 None:intergenic 50.0%
GGCCTACCACTCAATACACA+GGG + tig0016871:12783-12802 None:intergenic 50.0%
CTGTGTATTGAGTGGTAGGC+CGG - tig0016871:12782-12801 Msa1359970:intron 50.0%
!! GTTCTTGGTGCTGCAAGGAC+AGG - tig0016871:7080-7099 Msa1359970:intron 55.0%
AGCTACTCCTGGTCGTCTTC+TGG - tig0016871:8047-8066 Msa1359970:intron 55.0%
CTCATCGAGGTCCTCTCACA+TGG - tig0016871:8568-8587 Msa1359970:intron 55.0%
TGCATGACAGAAAGGGAGGG+GGG + tig0016871:8924-8943 None:intergenic 55.0%
GTGCATGACAGAAAGGGAGG+GGG + tig0016871:8925-8944 None:intergenic 55.0%
CGTGCATGACAGAAAGGGAG+GGG + tig0016871:8926-8945 None:intergenic 55.0%
CTCGTGCATGACAGAAAGGG+AGG + tig0016871:8928-8947 None:intergenic 55.0%
CAGGCTCGTGCATGACAGAA+AGG + tig0016871:8932-8951 None:intergenic 55.0%
AGCGGTGTGCTTGCAGTTTC+TGG - tig0016871:9572-9591 Msa1359970:CDS 55.0%
! TGTACTGACGTTGCTGCTCG+TGG - tig0016871:10042-10061 Msa1359970:intron 55.0%
GCTGGGAGATGGAAGGTAAG+TGG - tig0016871:10635-10654 Msa1359970:intron 55.0%
TGGCTACCAGTCTCGGAATG+TGG - tig0016871:10655-10674 Msa1359970:intron 55.0%
GGCTACCAGTCTCGGAATGT+GGG - tig0016871:10656-10675 Msa1359970:intron 55.0%
GTGTTCCCACATTCCGAGAC+TGG + tig0016871:10664-10683 None:intergenic 55.0%
AGAACAGCTCGTGGGGAAGA+TGG - tig0016871:11132-11151 Msa1359970:intron 55.0%
GCTCGTGGGGAAGATGGAAA+AGG - tig0016871:11138-11157 Msa1359970:intron 55.0%
TTTCTGGACCCGACCATGAC+AGG + tig0016871:11348-11367 None:intergenic 55.0%
CACACACTCACACACACACG+AGG - tig0016871:11534-11553 Msa1359970:CDS 55.0%
!! TGCTATTTCCCCTAAGCCCC+AGG - tig0016871:11710-11729 Msa1359970:intron 55.0%
GATAGGGACGAAGTCACCAG+AGG - tig0016871:12600-12619 Msa1359970:intron 55.0%
GGGTTGGGATTGTGTACCTC+TGG + tig0016871:12619-12638 None:intergenic 55.0%
GCCCCTGTGTATTGAGTGGT+AGG - tig0016871:12778-12797 Msa1359970:intron 55.0%
CGGCCTACCACTCAATACAC+AGG + tig0016871:12784-12803 None:intergenic 55.0%
! GGTGCTGCAAGGACAGGTTC+TGG - tig0016871:7086-7105 Msa1359970:intron 60.0%
ATGACAGAAAGGGAGGGGGG+GGG + tig0016871:8921-8940 None:intergenic 60.0%
CATGACAGAAAGGGAGGGGG+GGG + tig0016871:8922-8941 None:intergenic 60.0%
GCATGACAGAAAGGGAGGGG+GGG + tig0016871:8923-8942 None:intergenic 60.0%
TGACGTTGCTGCTCGTGGAC+TGG - tig0016871:10047-10066 Msa1359970:intron 60.0%
CCTTCCATCTCCCAGCAGCT+AGG + tig0016871:10631-10650 None:intergenic 60.0%
CCTAGCTGCTGGGAGATGGA+AGG - tig0016871:10628-10647 Msa1359970:intron 60.0%
CGACCCGCCTGATGAACCAA+AGG - tig0016871:10995-11014 Msa1359970:intron 60.0%
AGGGTCGGTAGAACAGCTCG+TGG - tig0016871:11123-11142 Msa1359970:intron 60.0%
GGGTCGGTAGAACAGCTCGT+GGG - tig0016871:11124-11143 Msa1359970:intron 60.0%
GGTCGGTAGAACAGCTCGTG+GGG - tig0016871:11125-11144 Msa1359970:intron 60.0%
GACAGAGTCCTGGGGCTTAG+GGG + tig0016871:11721-11740 None:intergenic 60.0%
GGACAGAGTCCTGGGGCTTA+GGG + tig0016871:11722-11741 None:intergenic 60.0%
TGACAGAAAGGGAGGGGGGG+GGG + tig0016871:8920-8939 None:intergenic 65.0%
GGGACAGAGTCCTGGGGCTT+AGG + tig0016871:11723-11742 None:intergenic 65.0%
ACAGAAAGGGAGGGGGGGGG+GGG + tig0016871:8918-8937 None:intergenic 70.0%
GACAGAAAGGGAGGGGGGGG+GGG + tig0016871:8919-8938 None:intergenic 70.0%
AGAAAGGGAGGGGGGGGGGG+GGG + tig0016871:8916-8935 None:intergenic 75.0%
CAGAAAGGGAGGGGGGGGGG+GGG + tig0016871:8917-8936 None:intergenic 75.0%
! AAAGGGAGGGGGGGGGGGGG+GGG + tig0016871:8914-8933 None:intergenic 80.0%
! GAAAGGGAGGGGGGGGGGGG+GGG + tig0016871:8915-8934 None:intergenic 80.0%
! AAGGGAGGGGGGGGGGGGGG+GGG + tig0016871:8913-8932 None:intergenic 85.0%
! AGGGAGGGGGGGGGGGGGGG+GGG + tig0016871:8912-8931 None:intergenic 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + tig0016871:8908-8927 None:intergenic 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG + tig0016871:8909-8928 None:intergenic 95.0%
! GGAGGGGGGGGGGGGGGGGG+GGG + tig0016871:8910-8929 None:intergenic 95.0%
! GGGAGGGGGGGGGGGGGGGG+GGG + tig0016871:8911-8930 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
tig0016871 gene 6120 13497 6120 ID=Msa1359970;Name=Msa1359970
tig0016871 mRNA 6120 13497 6120 ID=Msa1359970-mRNA-1;Parent=Msa1359970;Name=Msa1359970-mRNA-1;_AED=0.08;_eAED=0.08;_QI=77|1|1|1|1|1|12|295|584
tig0016871 exon 6120 6588 6120 ID=Msa1359970-mRNA-1:exon:11685;Parent=Msa1359970-mRNA-1
tig0016871 exon 7517 7642 7517 ID=Msa1359970-mRNA-1:exon:11684;Parent=Msa1359970-mRNA-1
tig0016871 exon 7736 7804 7736 ID=Msa1359970-mRNA-1:exon:11683;Parent=Msa1359970-mRNA-1
tig0016871 exon 8402 8506 8402 ID=Msa1359970-mRNA-1:exon:11682;Parent=Msa1359970-mRNA-1
tig0016871 exon 8601 8639 8601 ID=Msa1359970-mRNA-1:exon:11681;Parent=Msa1359970-mRNA-1
tig0016871 exon 9534 9833 9534 ID=Msa1359970-mRNA-1:exon:11680;Parent=Msa1359970-mRNA-1
tig0016871 exon 9921 9992 9921 ID=Msa1359970-mRNA-1:exon:11679;Parent=Msa1359970-mRNA-1
tig0016871 exon 10229 10270 10229 ID=Msa1359970-mRNA-1:exon:11678;Parent=Msa1359970-mRNA-1
tig0016871 exon 10733 10816 10733 ID=Msa1359970-mRNA-1:exon:11677;Parent=Msa1359970-mRNA-1
tig0016871 exon 11504 11695 11504 ID=Msa1359970-mRNA-1:exon:11676;Parent=Msa1359970-mRNA-1
tig0016871 exon 12394 12579 12394 ID=Msa1359970-mRNA-1:exon:11675;Parent=Msa1359970-mRNA-1
tig0016871 exon 13055 13497 13055 ID=Msa1359970-mRNA-1:exon:11674;Parent=Msa1359970-mRNA-1
tig0016871 five_prime_UTR 13421 13497 13421 ID=Msa1359970-mRNA-1:five_prime_utr;Parent=Msa1359970-mRNA-1
tig0016871 CDS 13055 13420 13055 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 12394 12579 12394 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 11504 11695 11504 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 10733 10816 10733 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 10229 10270 10229 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 9921 9992 9921 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 9534 9833 9534 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 8601 8639 8601 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 8402 8506 8402 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 7736 7804 7736 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 7517 7642 7517 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 CDS 6415 6588 6415 ID=Msa1359970-mRNA-1:cds;Parent=Msa1359970-mRNA-1
tig0016871 three_prime_UTR 6120 6414 6120 ID=Msa1359970-mRNA-1:three_prime_utr;Parent=Msa1359970-mRNA-1
Gene Sequence

>Msa1359970

ATGGCAGAACCAGAAATCAATCTTCAAGCTTCTTCACCAATGAATGAAACCAATGACATGAACAAAAGCAAGAAGAAGAAGAAGAAGCACGATAAGAAGCGAACCCGTGATATCGTTGAAGAAGAGGAACACGCCGAAGAGATTGTGAATGATACTCATAGCAACGAAGAATCCTCAAAAAAGAAAAAGAAGAAGAAGAATAAAGAGGAAGAAGATGTTGTTGAAGTAGAAACTGAATTGGAAGAGAAAAAAGTGAAAAATAACAAAGGTTCTGGAATTATGAGTTCTGAATCATTTTCTTCTCTTGAATTATCTGAAAATACTTCTAAAGCTATTATGGATATGGGATTTCAACACTTAACTCAGATTCAAGCAAGAGCGATTCCACCACTTTTAAGTGGAAAAGATGTTCTTGGTGCTGCAAGGACAGGTTCTGGAAAAACTCTTGCCTTTTTAATTCCTGCTGTGGAGCTTTTGCACAAGCTTAAGTTTAATCAGCGAAGTGGAACCGGTGTTGTTGTCATATGCCCTACTAGAGAGCTTGCCATTCAGACACACGAGGTTGCTCAGAAGCTTCTAAAGCATCATCGTCGTTCACAAACTCTTGGATTGGTTATAGGAGGTTCAGCTAGAAGAACCGAAGCCGAAAACCTTGCTAAAGGGATAAATATAGTGGTAGCTACTCCTGGTCGTCTTCTGGATCATCTACAAAATACCAAGAGATTCATATATAATAACCTGAAGTGCCTCATTATTGATGAAGCTGACAGGATATTGGAAGCAAACTTTGAGGATGAATTGAAGCAGATTATCAAGCTCCTCCCAAAGAACAGACAGACGGCTTTGTTTTCAGCTACACAAACAAAGAAGGTTGAAGATCTTGCTCGCCTGTCATTTCAGACGACGCCTATCTATATTGATGTAGATGATGGGAGAAAGAAGGTTACAAATGAAGGGTTGCTTCAGGGTTATGTTGTTGTTCCGTGTGCCAAGCGATTTATGGTTCTCTATTCCTTCTTGAAGAGGCATCAATCGAAAAAAGTGATGGTCTTTTTCTCTTCATGCAACAGTGTCAAATTCCATGCAGACATTTTTAATCACATTCATTTGCATTGTTCAAGTATTTACGGAAAACAAAAGCAGCAGACCCGGACAACTACTTTCGTTGACTTCTGCCAAGCAGAAAAGGGGATCTTGCTCTGTACTGACGTTGCTGCTCGTGGACTGGACATACCTTCTGTGGACTGGATTTTGCAGTACGACCCGCCTGATGAACCAAAGGAATATATCCACAGGGTCGGTAGAACAGCTCGTGGGGAAGATGGAAAAGGCAATGCTTTACTTTTCCTGATTCCTGAAGAATTGCAATTTCTTCGATATTTGAAGGAAGCTAAGGTCCCTGTGAAAGAATATGCTTATGATGAAAAGAAGGTGGCAAACATACAGTCTCACCTGGAGAATTTGGTTGCTGAAAATTATTTTTTGAACAAAATGGCTAAAGAAGCTTATAGATCATACATATTAGCGTACAATTCACATTCTTCGAAGGATATATTCAGTGTTCAACGCCTTGATATGCAGGCTGTTGCTGCTTCATTCTGTTTTTCGAACCCTCCAAATGTGAGTCTAAACATAAACGTCAACAAGCAAAGGAAGAAAACTCGTAGAGTTGATGGAAGCAGACATGGTTTCAATCCTAACAATCCTTATGGAAAGCGAAATGCCGATGATAAGCGGCAGTTTGTGAGACATTAA
Protein sequence

>Msa1359970

MAEPEINLQASSPMNETNDMNKSKKKKKKHDKKRTRDIVEEEEHAEEIVNDTHSNEESSKKKKKKKNKEEEDVVEVETELEEKKVKNNKGSGIMSSESFSSLELSENTSKAIMDMGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKLKFNQRSGTGVVVICPTRELAIQTHEVAQKLLKHHRRSQTLGLVIGGSARRTEAENLAKGINIVVATPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSATQTKKVEDLARLSFQTTPIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHQSKKVMVFFSSCNSVKFHADIFNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFLIPEELQFLRYLKEAKVPVKEYAYDEKKVANIQSHLENLVAENYFLNKMAKEAYRSYILAYNSHSSKDIFSVQRLDMQAVAASFCFSNPPNVSLNINVNKQRKKTRRVDGSRHGFNPNNPYGKRNADDKRQFVRH*