AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013991


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013991.t1 MTR_7g088260 84.735 321 39 3 1 316 1 316 0.0 532
MS.gene013991.t1 MTR_3g108150 61.925 239 81 4 82 316 8 240 8.80e-92 278
MS.gene013991.t1 MTR_3g108560 53.191 235 92 6 86 312 19 243 1.20e-70 222
MS.gene013991.t1 MTR_3g108560 53.191 235 92 6 86 312 19 243 9.06e-70 222
MS.gene013991.t1 MTR_0492s0020 54.274 234 94 5 82 312 81 304 8.72e-69 221
MS.gene013991.t1 MTR_0492s0020 65.385 52 18 0 83 134 8 59 9.71e-15 74.7
MS.gene013991.t1 MTR_0543s0010 54.274 234 94 5 82 312 81 304 1.69e-68 220
MS.gene013991.t1 MTR_0543s0010 65.385 52 18 0 83 134 8 59 1.02e-14 74.7
MS.gene013991.t1 MTR_3g109982 55.851 188 76 3 86 272 12 193 1.53e-54 190
MS.gene013991.t1 MTR_3g109982 52.500 120 53 2 197 312 209 328 1.62e-28 116
MS.gene013991.t1 MTR_3g110010 55.851 188 76 3 86 272 12 193 1.95e-54 189
MS.gene013991.t1 MTR_3g110010 52.500 120 53 2 197 312 209 328 1.93e-28 115
MS.gene013991.t1 MTR_3g087260 40.397 302 103 6 86 312 11 310 2.08e-50 173
MS.gene013991.t1 MTR_1g041245 43.590 234 124 5 87 315 11 241 3.11e-48 166
MS.gene013991.t1 MTR_3g040700 40.249 241 131 4 69 300 25 261 6.44e-44 155
MS.gene013991.t1 MTR_3g036250 43.049 223 114 4 87 300 5 223 6.79e-44 154
MS.gene013991.t1 MTR_7g098570 40.711 253 138 5 69 316 5 250 8.33e-44 156
MS.gene013991.t1 MTR_7g098510 39.676 247 140 4 75 316 6 248 3.89e-42 150
MS.gene013991.t1 MTR_7g032380 44.175 206 110 4 87 290 11 213 4.10e-42 149
MS.gene013991.t1 MTR_3g023630 41.395 215 123 3 84 297 5 217 1.08e-41 148
MS.gene013991.t1 MTR_7g056447 45.455 187 95 3 82 266 4 185 2.62e-41 145
MS.gene013991.t1 MTR_7g056420 42.857 217 88 4 86 295 8 195 4.26e-41 152
MS.gene013991.t1 MTR_7g056430 42.857 217 88 4 86 295 8 195 5.07e-41 152
MS.gene013991.t1 MTR_7g056020 43.644 236 107 5 86 316 15 229 1.90e-40 149
MS.gene013991.t1 MTR_7g115270 39.912 228 117 4 86 295 11 236 3.02e-40 145
MS.gene013991.t1 MTR_7g098480 40.693 231 127 4 75 300 6 231 2.03e-39 144
MS.gene013991.t1 MTR_7g056433 41.818 220 119 4 86 298 11 228 2.37e-39 142
MS.gene013991.t1 MTR_7g032370 42.584 209 111 5 102 307 5 207 1.66e-38 139
MS.gene013991.t1 MTR_4g134150 39.738 229 122 5 86 312 13 227 2.84e-38 135
MS.gene013991.t1 MTR_1g085120 35.548 301 155 10 34 315 135 415 7.88e-37 137
MS.gene013991.t1 MTR_1g085120 36.749 283 144 10 46 315 143 403 9.41e-37 138
MS.gene013991.t1 MTR_7g033915 38.723 235 114 5 87 312 11 224 1.00e-36 135
MS.gene013991.t1 MTR_1g085120 35.548 301 155 10 34 315 48 328 1.14e-36 137
MS.gene013991.t1 MTR_7g033945 44.512 164 84 2 87 245 11 172 2.74e-36 129
MS.gene013991.t1 MTR_8g085430 42.308 208 106 6 78 276 4 206 7.87e-36 132
MS.gene013991.t1 MTR_3g467400 36.735 245 134 7 87 312 3 245 3.00e-35 131
MS.gene013991.t1 MTR_7g033990 40.741 243 116 7 87 312 11 242 4.87e-35 132
MS.gene013991.t1 MTR_7g034115 41.485 229 127 5 87 311 11 236 2.81e-34 129
MS.gene013991.t1 MTR_4g080610 40.175 229 97 5 89 312 14 207 1.37e-33 127
MS.gene013991.t1 MTR_7g034110 40.000 235 123 6 87 308 11 240 6.37e-32 122
MS.gene013991.t1 MTR_5g073420 36.100 241 142 6 77 311 1 235 1.01e-31 122
MS.gene013991.t1 MTR_5g058100 37.860 243 133 7 81 312 3 238 1.88e-31 121
MS.gene013991.t1 MTR_1g066830 38.115 244 127 8 87 316 8 241 2.17e-31 121
MS.gene013991.t1 MTR_7g114710 42.246 187 101 4 87 270 13 195 7.37e-30 117
MS.gene013991.t1 MTR_7g026500 35.600 250 141 8 75 311 2 244 1.81e-29 116
MS.gene013991.t1 MTR_7g033940 47.656 128 65 1 89 216 96 221 2.41e-29 112
MS.gene013991.t1 MTR_3g105060 36.866 217 125 6 87 296 14 225 3.32e-29 115
MS.gene013991.t1 MTR_5g061680 42.105 190 99 6 87 270 11 195 6.04e-29 113
MS.gene013991.t1 MTR_6g011460 32.482 274 158 11 48 312 19 274 2.55e-28 113
MS.gene013991.t1 MTR_5g008920 38.117 223 124 7 84 297 6 223 3.64e-28 112
MS.gene013991.t1 MTR_3g082890 38.342 193 103 6 87 272 97 280 1.01e-26 109
MS.gene013991.t1 MTR_7g056287 33.054 239 144 6 86 313 2 235 1.09e-26 108
MS.gene013991.t1 MTR_3g107120 34.127 252 132 8 87 312 9 252 1.13e-26 108
MS.gene013991.t1 MTR_4g039440 34.454 238 136 5 87 312 34 263 1.49e-26 108
MS.gene013991.t1 MTR_3g082890 38.342 193 103 6 87 272 17 200 2.16e-26 108
MS.gene013991.t1 MTR_5g058000 36.364 242 137 7 80 311 1 235 7.85e-26 106
MS.gene013991.t1 MTR_5g012840 36.667 210 108 6 111 310 13 207 1.10e-25 104
MS.gene013991.t1 MTR_3g095600 35.983 239 113 9 87 313 4 214 1.28e-25 103
MS.gene013991.t1 MTR_7g007080 34.632 231 132 6 86 302 3 228 3.27e-25 104
MS.gene013991.t1 MTR_7g056277 32.218 239 146 6 86 313 258 491 4.18e-25 105
MS.gene013991.t1 MTR_6g022500 35.043 234 138 7 87 311 101 329 4.49e-25 105
MS.gene013991.t1 MTR_5g008950 33.475 236 137 7 89 315 1 225 1.24e-24 102
MS.gene013991.t1 MTR_3g107160 32.245 245 148 7 82 311 2 243 1.30e-24 102
MS.gene013991.t1 MTR_2g005990 35.968 253 135 11 87 316 6 254 1.69e-24 102
MS.gene013991.t1 MTR_6g044560 35.865 237 106 10 64 268 164 386 2.17e-24 103
MS.gene013991.t1 MTR_1089s0010 34.894 235 135 8 87 311 8 234 5.60e-24 100
MS.gene013991.t1 MTR_3g114200 41.096 146 77 4 87 229 19 158 1.68e-23 94.7
MS.gene013991.t1 MTR_6g044572 37.788 217 92 9 87 268 2 210 2.09e-23 99.8
MS.gene013991.t1 MTR_5g083890 35.686 255 135 8 86 312 5 258 3.01e-23 100
MS.gene013991.t1 MTR_3g071850 33.603 247 144 8 81 314 18 257 1.85e-22 98.2
MS.gene013991.t1 MTR_7g055943 34.426 244 144 7 83 315 36 274 1.89e-22 97.4
MS.gene013991.t1 MTR_1g107385 33.712 264 139 9 80 309 25 286 3.73e-22 96.3
MS.gene013991.t1 MTR_7g075820 31.200 250 134 7 83 301 2 244 4.09e-22 95.9
MS.gene013991.t1 MTR_2g007450 36.538 208 111 8 81 268 10 216 1.60e-21 94.7
MS.gene013991.t1 MTR_2g007500 30.531 226 128 5 82 295 9 217 1.95e-21 93.2
MS.gene013991.t1 MTR_1g108820 33.600 250 131 9 87 315 8 243 3.00e-21 93.6
MS.gene013991.t1 MTR_5g073340 34.468 235 121 5 87 315 8 215 3.77e-21 92.0
MS.gene013991.t1 MTR_1g108820 35.060 251 126 10 87 315 8 243 7.65e-21 91.7
MS.gene013991.t1 MTR_6g045333 34.848 264 141 11 64 314 49 294 7.66e-21 92.8
MS.gene013991.t1 MTR_7g034120 36.723 177 99 5 150 315 1 175 7.93e-21 91.3
MS.gene013991.t1 MTR_6g040270 32.906 234 139 7 89 311 10 236 1.66e-20 91.3
MS.gene013991.t1 MTR_5g045510 32.759 232 141 6 87 311 12 235 1.73e-20 91.3
MS.gene013991.t1 MTR_2g007400 36.181 199 107 8 87 268 12 207 3.86e-20 90.5
MS.gene013991.t1 MTR_7g060470 28.807 243 134 7 86 298 2 235 4.13e-20 90.1
MS.gene013991.t1 MTR_3g107100 31.383 188 129 0 86 273 10 197 6.22e-20 89.7
MS.gene013991.t1 MTR_5g007410 34.034 238 132 9 89 311 28 255 1.06e-19 89.4
MS.gene013991.t1 MTR_5g013500 32.735 223 107 8 86 298 8 197 1.26e-19 88.6
MS.gene013991.t1 MTR_6g092430 34.503 171 103 2 87 250 10 178 1.56e-19 88.6
MS.gene013991.t1 MTR_4g098590 30.222 225 135 7 89 294 1 222 2.30e-19 87.8
MS.gene013991.t1 MTR_1g108800 34.568 243 104 7 87 315 8 209 3.83e-19 87.0
MS.gene013991.t1 MTR_7g098590 42.593 108 62 0 75 182 6 113 1.17e-18 81.3
MS.gene013991.t1 MTR_0009s0080 32.932 249 141 10 78 311 9 246 1.24e-18 86.3
MS.gene013991.t1 MTR_3g007830 33.690 187 102 6 77 250 1 178 4.02e-18 84.3
MS.gene013991.t1 MTR_3g007790 34.831 178 94 6 86 250 24 192 5.90e-18 84.0
MS.gene013991.t1 MTR_8g468910 32.164 171 106 4 87 250 48 215 7.13e-18 84.0
MS.gene013991.t1 MTR_1g095750 54.321 81 35 1 87 165 46 126 1.32e-17 78.6
MS.gene013991.t1 MTR_2g020170 43.363 113 58 3 87 196 22 131 2.57e-17 77.8
MS.gene013991.t1 MTR_1g053025 33.043 230 126 10 87 295 2 224 3.22e-17 82.0
MS.gene013991.t1 MTR_5g065100 33.333 213 126 6 89 294 10 213 4.04e-17 82.0
MS.gene013991.t1 MTR_3g008050 34.831 178 94 6 86 250 10 178 5.08e-17 81.3
MS.gene013991.t1 MTR_5g073370 31.950 241 148 6 87 316 5 240 6.46e-17 80.9
MS.gene013991.t1 MTR_5g045170 33.913 230 143 6 89 313 16 241 1.47e-16 80.1
MS.gene013991.t1 MTR_7g034090 38.889 126 69 3 85 202 2 127 2.16e-16 79.7
MS.gene013991.t1 MTR_3g026920 31.429 245 121 8 82 295 14 242 3.78e-16 79.0
MS.gene013991.t1 MTR_6g022360 33.058 242 129 9 87 315 43 264 3.85e-16 79.0
MS.gene013991.t1 MTR_5g087940 33.714 175 105 4 76 249 15 179 4.65e-16 78.6
MS.gene013991.t1 MTR_7g083740 27.500 240 129 5 73 298 3 211 4.90e-16 78.2
MS.gene013991.t1 MTR_3g099830 31.120 241 139 8 81 312 6 228 1.42e-15 77.0
MS.gene013991.t1 MTR_3g023470 33.696 184 105 7 74 249 2 176 1.58e-15 77.0
MS.gene013991.t1 MTR_8g465650 30.682 176 106 5 87 250 12 183 2.42e-15 76.3
MS.gene013991.t1 MTR_7g056280 40.000 145 76 5 86 223 5 145 3.02e-15 76.6
MS.gene013991.t1 MTR_8g062310 31.100 209 114 7 72 268 10 200 4.97e-15 75.5
MS.gene013991.t1 MTR_4g093690 32.461 191 111 5 87 267 18 200 5.31e-15 74.3
MS.gene013991.t1 MTR_5g058350 34.595 185 90 5 87 269 8 163 6.38e-15 72.0
MS.gene013991.t1 MTR_2g101950 31.579 171 104 5 85 249 78 241 1.44e-14 73.9
MS.gene013991.t1 MTR_3g113782 54.237 59 26 1 86 143 16 74 1.50e-14 68.6
MS.gene013991.t1 MTR_4g080590 30.660 212 121 7 70 269 6 203 1.88e-14 73.6
MS.gene013991.t1 MTR_8g058965 30.802 237 129 10 78 284 4 235 2.02e-14 73.9
MS.gene013991.t1 MTR_2g101950 31.579 171 104 5 85 249 78 241 2.22e-14 73.6
MS.gene013991.t1 MTR_4g080590 31.132 212 120 8 70 269 6 203 2.25e-14 73.6
MS.gene013991.t1 MTR_2g101950 31.579 171 104 5 85 249 36 199 2.33e-14 73.6
MS.gene013991.t1 MTR_2g101950 31.579 171 104 5 85 249 77 240 2.36e-14 73.6
MS.gene013991.t1 MTR_2g100590 28.571 196 121 5 87 268 42 232 3.96e-14 72.8
MS.gene013991.t1 MTR_5g039490 31.250 256 151 9 72 311 6 252 4.31e-14 72.4
MS.gene013991.t1 MTR_2g100590 28.571 196 121 5 87 268 42 232 5.49e-14 72.8
MS.gene013991.t1 MTR_2g100590 28.571 196 121 5 87 268 42 232 5.63e-14 72.4
MS.gene013991.t1 MTR_3g099900 30.688 189 114 5 68 249 2 180 7.03e-14 72.0
MS.gene013991.t1 MTR_5g061410 30.667 225 118 9 89 302 7 204 9.54e-14 70.5
MS.gene013991.t1 MTR_7g017280 27.119 236 149 6 81 302 138 364 9.66e-14 72.0
MS.gene013991.t1 MTR_6g018660 28.125 192 120 4 73 249 6 194 9.79e-14 71.6
MS.gene013991.t1 MTR_2g099980 28.272 191 128 5 66 251 18 204 1.11e-13 71.6
MS.gene013991.t1 MTR_8g465380 30.058 173 110 4 87 250 12 182 1.76e-13 70.9
MS.gene013991.t1 MTR_3g027130 30.769 117 81 0 66 182 82 198 1.96e-13 69.7
MS.gene013991.t1 MTR_8g014290 33.333 153 87 3 81 218 4 156 2.07e-13 67.4
MS.gene013991.t1 MTR_1g492880 46.341 82 42 1 86 165 5 86 2.15e-13 65.5
MS.gene013991.t1 MTR_5g031970 30.806 211 121 8 78 284 7 196 2.33e-13 70.1
MS.gene013991.t1 MTR_2g008320 29.435 248 153 7 82 312 47 289 3.83e-13 70.1
MS.gene013991.t1 MTR_1g038710 30.040 253 137 9 60 296 2 230 5.30e-13 69.7
MS.gene013991.t1 MTR_1g067190 31.694 183 106 6 81 255 9 180 1.19e-12 68.2
MS.gene013991.t1 MTR_1g492880 45.783 83 43 1 86 166 5 87 1.45e-12 63.5
MS.gene013991.t1 MTR_4g024780 28.270 237 147 8 72 300 136 357 1.60e-12 68.2
MS.gene013991.t1 MTR_3g023270 33.333 174 100 5 81 249 6 168 2.30e-12 67.4
MS.gene013991.t1 MTR_3g023330 31.319 182 112 7 73 249 2 175 2.69e-12 67.0
MS.gene013991.t1 MTR_3g005980 29.730 185 114 5 73 249 2 178 2.83e-12 67.0
MS.gene013991.t1 MTR_8g014160 34.146 205 108 9 84 268 38 235 3.22e-12 67.0
MS.gene013991.t1 MTR_8g066650 28.384 229 135 8 73 298 66 268 3.73e-12 67.0
MS.gene013991.t1 MTR_8g445780 32.353 204 99 8 86 268 12 197 3.86e-12 66.6
MS.gene013991.t1 MTR_2g007360 27.273 253 126 9 82 312 7 223 4.46e-12 66.6
MS.gene013991.t1 MTR_7g081290 46.341 82 41 2 87 165 18 99 5.06e-12 65.5
MS.gene013991.t1 MTR_7g021930 34.921 189 104 8 85 268 8 182 6.10e-12 65.9
MS.gene013991.t1 MTR_7g021970 34.921 189 104 8 85 268 8 182 6.10e-12 65.9
MS.gene013991.t1 MTR_7g068570 33.571 140 88 4 85 223 3 138 6.51e-12 63.5
MS.gene013991.t1 MTR_7g021990 28.182 220 114 5 86 263 4 221 6.99e-12 66.2
MS.gene013991.t1 MTR_7g022060 34.921 189 104 8 85 268 8 182 7.08e-12 65.9
MS.gene013991.t1 MTR_5g063950 31.720 186 100 7 87 270 8 168 8.00e-12 65.9
MS.gene013991.t1 MTR_4g024680 27.778 198 132 7 75 268 142 332 8.06e-12 66.6
MS.gene013991.t1 MTR_5g039970 29.048 210 129 7 70 268 2 202 8.15e-12 65.5
MS.gene013991.t1 MTR_7g021950 28.182 220 114 5 86 263 4 221 8.39e-12 66.2
MS.gene013991.t1 MTR_6g088700 32.258 186 107 7 73 249 3 178 9.49e-12 65.5
MS.gene013991.t1 MTR_4g014260 29.480 173 107 5 79 244 18 182 9.68e-12 65.9
MS.gene013991.t1 MTR_8g468810 30.097 206 131 5 74 268 12 215 9.86e-12 65.1
MS.gene013991.t1 MTR_4g081030 31.414 191 116 4 81 268 11 189 1.01e-11 65.5
MS.gene013991.t1 MTR_4g092430 36.170 94 60 0 72 165 28 121 1.02e-11 65.9
MS.gene013991.t1 MTR_4g092430 36.170 94 60 0 72 165 28 121 1.12e-11 65.9
MS.gene013991.t1 MTR_8g468810 30.097 206 131 5 74 268 12 215 1.15e-11 65.1
MS.gene013991.t1 MTR_4g014260 30.055 183 110 6 69 244 11 182 1.17e-11 65.5
MS.gene013991.t1 MTR_2g008310 28.061 196 121 4 87 273 2 186 1.21e-11 65.5
MS.gene013991.t1 MTR_5g060570 33.136 169 101 7 86 249 16 177 1.24e-11 64.3
MS.gene013991.t1 MTR_8g468810 30.097 206 131 5 74 268 12 215 1.31e-11 65.1
MS.gene013991.t1 MTR_5g039450 28.992 238 130 8 87 311 6 217 1.54e-11 64.7
MS.gene013991.t1 MTR_2g094750 28.889 225 132 8 74 271 73 296 1.65e-11 65.1
MS.gene013991.t1 MTR_0571s0010 45.946 74 38 1 79 150 24 97 1.70e-11 60.8
MS.gene013991.t1 MTR_8g468810 30.097 206 131 5 74 268 12 215 1.70e-11 64.7
MS.gene013991.t1 MTR_8g468810 30.097 206 131 5 74 268 12 215 1.74e-11 65.1
MS.gene013991.t1 MTR_5g084070 32.124 193 114 6 87 274 13 193 1.78e-11 65.1
MS.gene013991.t1 MTR_0438s0020 30.282 142 95 2 73 214 54 191 1.87e-11 64.7
MS.gene013991.t1 MTR_7g021630 29.545 176 91 7 86 249 16 170 2.18e-11 64.3
MS.gene013991.t1 MTR_5g066560 30.729 192 99 7 73 250 2 173 2.46e-11 64.3
MS.gene013991.t1 MTR_7g021630 29.545 176 91 7 86 249 16 170 2.56e-11 64.3
MS.gene013991.t1 MTR_6g009020 27.692 195 121 5 73 249 2 194 3.19e-11 63.9
MS.gene013991.t1 MTR_6g088705 29.101 189 115 6 73 251 8 187 3.39e-11 62.8
MS.gene013991.t1 MTR_5g039950 26.984 252 149 6 76 307 12 248 3.57e-11 63.9
MS.gene013991.t1 MTR_3g448340 30.303 198 119 5 87 269 6 199 3.59e-11 63.9
MS.gene013991.t1 MTR_3g036320 29.787 188 110 6 68 249 11 182 3.86e-11 63.5
MS.gene013991.t1 MTR_4g050930 30.921 152 98 3 72 223 14 158 4.00e-11 63.9
MS.gene013991.t1 MTR_5g073400 37.931 116 58 3 159 270 7 112 4.93e-11 60.1
MS.gene013991.t1 MTR_4g050930 32.026 153 95 4 72 223 14 158 5.00e-11 63.5
MS.gene013991.t1 MTR_7g056417 40.000 100 48 3 208 295 7 106 5.15e-11 60.5
MS.gene013991.t1 MTR_4g080787 27.982 218 141 7 70 272 2 218 5.77e-11 63.5
MS.gene013991.t1 MTR_6g018600 31.579 171 101 5 85 249 50 210 5.85e-11 63.2
MS.gene013991.t1 MTR_3g006580 32.955 176 95 6 85 249 31 194 6.28e-11 63.2
MS.gene013991.t1 MTR_3g052940 28.177 181 113 4 75 247 16 187 6.83e-11 63.2
MS.gene013991.t1 MTR_3g052940 28.177 181 113 4 75 247 16 187 6.93e-11 63.2
MS.gene013991.t1 MTR_4g023670 28.409 176 114 5 78 249 113 280 6.99e-11 63.2
MS.gene013991.t1 MTR_3g052940 28.177 181 113 4 75 247 16 187 7.33e-11 63.2
MS.gene013991.t1 MTR_3g052990 28.177 181 113 4 75 247 16 187 7.73e-11 63.2
MS.gene013991.t1 MTR_6g025160 27.962 211 117 7 86 294 100 277 8.02e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013991.t1 AT5G22660 36.842 190 105 5 84 268 10 189 3.12e-23 97.8
MS.gene013991.t1 AT5G22660 36.842 190 105 5 84 268 10 189 3.90e-23 99.4
MS.gene013991.t1 AT5G38590 41.146 192 94 10 87 270 2 182 6.14e-23 96.7
MS.gene013991.t1 AT5G38590 41.146 192 94 10 87 270 2 182 9.45e-23 97.8
MS.gene013991.t1 AT5G41840 34.951 206 109 6 83 268 10 210 1.65e-22 98.2
MS.gene013991.t1 AT4G14103 37.056 197 107 6 87 273 8 197 2.25e-22 96.7
MS.gene013991.t1 AT4G14103 37.056 197 107 6 87 273 8 197 2.25e-22 96.7
MS.gene013991.t1 AT4G14096 37.436 195 107 5 87 273 8 195 2.29e-22 97.4
MS.gene013991.t1 AT4G14096 37.436 195 107 5 87 273 8 195 2.29e-22 97.4
MS.gene013991.t1 AT5G56370 40.957 188 92 9 87 266 2 178 3.27e-22 95.1
MS.gene013991.t1 AT5G56370 40.957 188 92 9 87 266 2 178 3.78e-22 96.3
MS.gene013991.t1 AT5G56370 40.957 188 92 9 87 266 2 178 3.78e-22 96.3
MS.gene013991.t1 AT4G14103 37.056 197 107 6 87 273 8 197 3.81e-22 96.7
MS.gene013991.t1 AT2G04230 38.660 194 103 7 85 268 11 198 5.86e-21 93.2
MS.gene013991.t1 AT1G16930 35.897 195 100 6 85 268 13 193 1.91e-20 91.7
MS.gene013991.t1 AT1G16930 35.897 195 100 6 85 268 13 193 1.91e-20 91.7
MS.gene013991.t1 AT1G16930 35.897 195 100 6 85 268 13 193 1.91e-20 91.7
MS.gene013991.t1 AT3G59200 36.364 198 99 8 87 268 7 193 2.01e-20 90.9
MS.gene013991.t1 AT1G58310 35.981 214 103 7 83 269 4 210 2.45e-20 91.7
MS.gene013991.t1 AT4G00315 33.937 221 138 6 87 301 2 220 2.66e-20 91.3
MS.gene013991.t1 AT3G59240 34.500 200 112 6 86 273 7 199 3.69e-20 91.3
MS.gene013991.t1 AT3G59210 38.191 199 100 7 85 269 5 194 4.52e-20 90.9
MS.gene013991.t1 AT3G59210 38.191 199 100 7 85 269 5 194 4.52e-20 90.9
MS.gene013991.t1 AT3G59210 38.191 199 100 7 85 269 5 194 4.52e-20 90.9
MS.gene013991.t1 AT3G59210 38.191 199 100 7 85 269 5 194 4.52e-20 90.9
MS.gene013991.t1 AT3G59210 38.191 199 100 7 85 269 5 194 4.52e-20 90.9
MS.gene013991.t1 AT4G10400 38.021 192 104 4 87 271 2 185 5.10e-20 90.1
MS.gene013991.t1 AT4G10400 38.021 192 104 4 87 271 2 185 5.10e-20 90.1
MS.gene013991.t1 AT4G10400 38.021 192 104 4 87 271 2 185 5.10e-20 90.1
MS.gene013991.t1 AT1G55660 38.421 190 104 7 87 268 53 237 5.87e-20 89.7
MS.gene013991.t1 AT3G59200 36.364 198 99 8 87 268 7 193 8.33e-20 90.1
MS.gene013991.t1 AT1G55660 38.421 190 104 7 87 268 53 237 8.49e-20 90.1
MS.gene013991.t1 AT1G60400 34.031 191 116 5 83 268 10 195 1.45e-19 89.0
MS.gene013991.t1 AT1G69630 34.000 200 121 5 74 268 5 198 1.48e-19 89.0
MS.gene013991.t1 AT3G59230 33.333 210 113 6 78 268 4 205 2.39e-19 88.6
MS.gene013991.t1 AT3G26922 34.555 191 116 7 81 268 8 192 2.80e-19 86.7
MS.gene013991.t1 AT3G26922 34.555 191 116 7 81 268 8 192 2.80e-19 86.7
MS.gene013991.t1 AT5G53840 33.498 203 114 6 71 268 7 193 3.64e-19 87.8
MS.gene013991.t1 AT1G51370 31.527 203 124 5 86 287 18 206 6.47e-19 86.3
MS.gene013991.t1 AT4G09920 37.436 195 107 4 87 274 2 188 7.85e-19 85.5
MS.gene013991.t1 AT4G09920 37.436 195 107 4 87 274 2 188 7.85e-19 85.5
MS.gene013991.t1 AT4G09920 37.436 195 107 4 87 274 2 188 7.85e-19 85.5
MS.gene013991.t1 AT4G09920 37.436 195 107 4 87 274 2 188 9.00e-19 85.5
MS.gene013991.t1 AT4G09920 37.436 195 107 4 87 274 2 188 9.00e-19 85.5
MS.gene013991.t1 AT1G51370 32.020 203 123 6 86 287 18 206 9.74e-19 86.7
MS.gene013991.t1 AT5G22730 32.804 189 117 3 84 268 25 207 1.04e-18 86.7
MS.gene013991.t1 AT5G22730 32.804 189 117 3 84 268 25 207 1.04e-18 86.7
MS.gene013991.t1 AT5G22720 31.959 194 121 4 81 269 17 204 1.09e-18 86.7
MS.gene013991.t1 AT1G51370 32.020 203 123 6 86 287 18 206 1.12e-18 86.7
MS.gene013991.t1 AT5G22700 33.663 202 122 5 71 270 30 221 1.45e-18 86.3
MS.gene013991.t1 AT5G22730 32.804 189 117 3 84 268 25 207 1.54e-18 85.9
MS.gene013991.t1 AT5G22700 34.000 200 120 5 71 268 30 219 1.58e-18 86.3
MS.gene013991.t1 AT5G62970 34.466 206 111 5 87 268 2 207 1.65e-18 85.9
MS.gene013991.t1 AT3G58880 33.486 218 123 6 87 290 3 212 1.65e-18 86.3
MS.gene013991.t1 AT5G22700 35.326 184 110 4 87 268 6 182 1.94e-18 85.9
MS.gene013991.t1 AT5G22700 35.326 184 110 4 87 268 6 182 1.94e-18 85.9
MS.gene013991.t1 AT5G22700 35.326 184 110 4 87 268 6 182 1.94e-18 85.9
MS.gene013991.t1 AT5G22700 35.326 184 110 4 87 268 6 182 1.94e-18 85.9
MS.gene013991.t1 AT4G26350 35.784 204 114 9 87 285 2 193 1.98e-18 85.9
MS.gene013991.t1 AT5G18780 31.053 190 118 4 83 268 7 187 2.96e-18 84.7
MS.gene013991.t1 AT5G18780 31.053 190 118 4 83 268 7 187 2.96e-18 84.7
MS.gene013991.t1 AT5G18780 31.053 190 118 4 83 268 7 187 5.04e-18 84.7
MS.gene013991.t1 AT5G18780 31.053 190 118 4 83 268 7 187 5.04e-18 84.7
MS.gene013991.t1 AT4G00160 36.316 190 109 7 85 268 14 197 7.27e-18 84.3
MS.gene013991.t1 AT4G26340 38.172 186 105 7 87 268 2 181 1.26e-17 83.2
MS.gene013991.t1 AT1G66290 32.474 194 116 8 78 266 18 201 1.28e-17 83.6
MS.gene013991.t1 AT5G60610 38.298 188 98 7 87 268 2 177 1.72e-17 82.8
MS.gene013991.t1 AT5G60610 38.298 188 98 7 87 268 2 177 1.72e-17 82.8
MS.gene013991.t1 AT3G26922 32.275 189 98 7 81 268 8 167 2.18e-17 81.3
MS.gene013991.t1 AT5G53640 28.846 208 107 5 78 268 13 196 2.25e-17 80.1
MS.gene013991.t1 AT4G15060 33.772 228 141 6 73 295 12 234 5.00e-17 81.6
MS.gene013991.t1 AT5G41830 32.843 204 107 7 87 268 13 208 5.39e-17 81.6
MS.gene013991.t1 AT5G27750 33.495 206 100 7 85 268 3 193 5.85e-17 80.9
MS.gene013991.t1 AT5G27750 33.495 206 100 7 85 268 3 193 6.84e-17 81.3
MS.gene013991.t1 AT1G78760 30.159 189 122 5 84 268 13 195 9.64e-17 80.9
MS.gene013991.t1 AT5G44950 28.319 226 141 8 85 304 2 212 1.22e-16 80.5
MS.gene013991.t1 AT4G15060 34.579 214 130 6 87 295 172 380 1.29e-16 80.9
MS.gene013991.t1 AT3G58930 33.168 202 108 8 87 268 2 196 1.29e-16 80.5
MS.gene013991.t1 AT3G58930 33.168 202 108 8 87 268 2 196 1.29e-16 80.5
MS.gene013991.t1 AT3G58930 33.168 202 108 8 87 268 2 196 1.29e-16 80.5
MS.gene013991.t1 AT5G56380 34.872 195 106 6 87 268 2 188 1.31e-16 80.5
MS.gene013991.t1 AT5G56380 34.872 195 106 6 87 268 2 188 1.31e-16 80.5
MS.gene013991.t1 AT5G53635 30.415 217 145 3 89 301 2 216 1.76e-16 80.1
MS.gene013991.t1 AT4G00320 31.863 204 109 7 87 268 13 208 1.76e-16 80.1
MS.gene013991.t1 AT3G50710 33.508 191 111 6 87 268 2 185 2.28e-16 79.7
MS.gene013991.t1 AT1G55030 33.333 198 122 5 73 268 5 194 2.41e-16 79.7
MS.gene013991.t1 AT3G42770 32.057 209 117 7 89 282 1 199 3.48e-16 79.3
MS.gene013991.t1 AT1G55030 33.684 190 116 5 81 268 3 184 3.96e-16 79.0
MS.gene013991.t1 AT1G78750 32.075 212 126 6 72 271 3 208 5.61e-16 78.6
MS.gene013991.t1 AT1G78750 32.075 212 126 6 72 271 3 208 5.61e-16 78.6
MS.gene013991.t1 AT3G52680 34.555 191 110 7 85 268 19 201 6.36e-16 78.6
MS.gene013991.t1 AT4G13965 33.178 214 126 9 87 295 10 211 1.03e-15 77.8
MS.gene013991.t1 AT5G56420 34.595 185 113 5 87 268 6 185 1.13e-15 77.4
MS.gene013991.t1 AT5G56420 34.595 185 113 5 87 268 6 185 1.13e-15 77.4
MS.gene013991.t1 AT5G56420 34.595 185 113 5 87 268 6 185 1.13e-15 77.4
MS.gene013991.t1 AT1G66310 29.082 196 131 3 75 268 7 196 1.24e-15 77.4
MS.gene013991.t1 AT3G52680 34.555 191 110 7 85 268 19 201 1.45e-15 77.0
MS.gene013991.t1 AT3G44810 31.020 245 139 9 82 308 2 234 1.48e-15 77.4
MS.gene013991.t1 AT1G60410 31.053 190 122 5 84 268 7 192 1.91e-15 76.6
MS.gene013991.t1 AT3G58960 32.812 192 110 7 87 268 2 184 3.53e-15 76.3
MS.gene013991.t1 AT5G25860 31.081 222 112 8 82 274 7 216 4.46e-15 75.9
MS.gene013991.t1 AT3G49150 30.049 203 118 8 80 268 9 201 4.71e-15 75.9
MS.gene013991.t1 AT3G51530 31.925 213 129 9 59 268 5 204 5.83e-15 75.5
MS.gene013991.t1 AT2G26860 33.854 192 116 5 87 271 2 189 6.99e-15 75.1
MS.gene013991.t1 AT2G26860 33.854 192 116 5 87 271 2 189 6.99e-15 75.1
MS.gene013991.t1 AT3G60040 31.553 206 116 9 87 271 13 214 7.11e-15 75.5
MS.gene013991.t1 AT5G56440 33.862 189 110 8 87 268 2 182 7.20e-15 75.1
MS.gene013991.t1 AT5G38392 31.068 206 115 6 87 273 2 199 8.22e-15 72.8
MS.gene013991.t1 AT5G18770 31.937 191 118 6 85 268 22 207 9.36e-15 74.7
MS.gene013991.t1 AT5G18770 31.937 191 118 6 85 268 22 207 9.96e-15 75.1
MS.gene013991.t1 AT3G58900 31.897 232 121 11 87 299 2 215 1.04e-14 73.9
MS.gene013991.t1 AT3G58900 31.897 232 121 11 87 299 2 215 1.09e-14 74.7
MS.gene013991.t1 AT1G48400 32.653 196 116 6 87 272 10 199 1.11e-14 74.7
MS.gene013991.t1 AT3G58900 31.897 232 121 11 87 299 2 215 1.17e-14 73.9
MS.gene013991.t1 AT3G58900 31.897 232 121 11 87 299 2 215 1.17e-14 73.9
MS.gene013991.t1 AT5G56560 32.000 200 121 7 86 278 4 195 1.20e-14 74.7
MS.gene013991.t1 AT5G22670 30.374 214 137 5 84 293 8 213 1.21e-14 74.7
MS.gene013991.t1 AT3G60040 31.401 207 117 9 86 271 231 433 1.28e-14 75.1
MS.gene013991.t1 AT5G02920 32.105 190 108 8 85 269 26 199 1.28e-14 72.8
MS.gene013991.t1 AT5G56820 31.308 214 134 4 87 297 15 218 1.30e-14 74.3
MS.gene013991.t1 AT3G60040 31.401 207 117 9 86 271 232 434 1.32e-14 75.1
MS.gene013991.t1 AT2G29930 31.628 215 130 8 87 295 12 215 1.35e-14 74.3
MS.gene013991.t1 AT2G29930 31.628 215 130 8 87 295 12 215 1.35e-14 74.3
MS.gene013991.t1 AT1G48400 32.653 196 116 6 87 272 10 199 1.36e-14 74.7
MS.gene013991.t1 AT5G56410 32.683 205 110 7 87 268 2 201 1.58e-14 74.3
MS.gene013991.t1 AT4G22280 33.514 185 114 6 87 268 2 180 1.63e-14 73.9
MS.gene013991.t1 AT3G60040 31.401 207 117 9 86 271 229 431 1.85e-14 74.3
MS.gene013991.t1 AT4G22280 33.514 185 114 6 87 268 2 180 1.87e-14 73.2
MS.gene013991.t1 AT3G56780 34.555 191 98 9 89 268 9 183 1.90e-14 73.9
MS.gene013991.t1 AT3G60040 31.401 207 117 9 86 271 231 433 1.94e-14 74.3
MS.gene013991.t1 AT3G56780 34.555 191 98 9 89 268 9 183 1.98e-14 73.9
MS.gene013991.t1 AT2G26030 30.811 185 118 6 87 267 4 182 2.14e-14 73.9
MS.gene013991.t1 AT2G26030 30.811 185 118 6 87 267 4 182 2.14e-14 73.9
MS.gene013991.t1 AT2G26030 30.811 185 118 6 87 267 4 182 2.19e-14 73.9
MS.gene013991.t1 AT5G38590 38.462 156 78 9 87 235 2 146 2.23e-14 72.4
MS.gene013991.t1 AT5G44980 33.862 189 114 6 86 268 3 186 2.53e-14 72.8
MS.gene013991.t1 AT5G44980 33.862 189 114 6 86 268 3 186 2.53e-14 72.8
MS.gene013991.t1 AT3G58980 31.980 197 122 7 87 276 2 193 2.71e-14 73.9
MS.gene013991.t1 AT3G58940 31.250 208 105 9 87 268 2 197 2.90e-14 73.9
MS.gene013991.t1 AT3G58940 31.250 208 105 9 87 268 2 197 2.90e-14 73.9
MS.gene013991.t1 AT3G56780 34.555 191 98 9 89 268 9 183 3.53e-14 73.2
MS.gene013991.t1 AT1G66300 29.255 188 127 2 82 268 24 206 3.75e-14 73.2
MS.gene013991.t1 AT1G32375 35.450 189 109 8 87 268 2 184 3.95e-14 72.8
MS.gene013991.t1 AT1G32375 35.450 189 109 8 87 268 2 184 3.95e-14 72.8
MS.gene013991.t1 AT5G56560 30.622 209 133 6 86 290 4 204 4.96e-14 72.8
MS.gene013991.t1 AT5G56690 32.804 189 117 6 88 269 3 188 5.02e-14 72.4
MS.gene013991.t1 AT5G44980 34.043 188 113 6 87 268 4 186 7.89e-14 72.0
MS.gene013991.t1 AT5G44980 34.043 188 113 6 87 268 4 186 7.89e-14 72.0
MS.gene013991.t1 AT5G56810 32.843 204 119 8 72 268 3 195 8.03e-14 72.0
MS.gene013991.t1 AT5G56810 32.843 204 119 8 72 268 3 195 8.37e-14 71.2
MS.gene013991.t1 AT4G13985 31.132 212 131 6 73 273 5 212 1.15e-13 71.6
MS.gene013991.t1 AT5G22610 31.606 193 115 6 86 268 17 202 1.43e-13 71.2
MS.gene013991.t1 AT5G22610 31.606 193 115 6 86 268 17 202 1.56e-13 71.2
MS.gene013991.t1 AT1G66320 26.842 190 132 3 81 268 23 207 1.99e-13 70.9
MS.gene013991.t1 AT2G42730 29.902 204 124 6 85 274 3 201 3.36e-13 70.1
MS.gene013991.t1 AT5G25850 31.683 202 118 6 87 284 20 205 5.54e-13 69.7
MS.gene013991.t1 AT1G13780 31.527 203 110 8 85 268 8 200 6.31e-13 68.9
MS.gene013991.t1 AT3G49040 34.673 199 112 8 85 274 15 204 7.36e-13 68.6
MS.gene013991.t1 AT1G13780 31.527 203 110 8 85 268 8 200 7.87e-13 69.3
MS.gene013991.t1 AT5G44940 31.579 190 117 6 87 268 5 189 8.33e-13 68.9
MS.gene013991.t1 AT1G80470 31.383 188 122 4 84 268 12 195 9.25e-13 68.9
MS.gene013991.t1 AT5G38590 45.833 96 47 4 177 270 55 147 1.09e-12 67.4
MS.gene013991.t1 AT3G59190 32.524 206 116 8 78 268 4 201 1.16e-12 68.6
MS.gene013991.t1 AT3G58920 28.889 225 138 8 87 295 2 220 1.19e-12 68.6
MS.gene013991.t1 AT3G59190 32.524 206 116 8 78 268 4 201 1.75e-12 68.2
MS.gene013991.t1 AT4G13960 31.282 195 111 6 87 268 2 186 2.21e-12 67.8
MS.gene013991.t1 AT4G13960 31.282 195 111 6 87 268 2 186 2.21e-12 67.8
MS.gene013991.t1 AT5G02930 31.707 205 120 8 69 269 12 200 2.96e-12 67.4
MS.gene013991.t1 AT3G44060 32.447 188 108 6 92 268 4 183 2.96e-12 67.4
MS.gene013991.t1 AT3G59000 32.967 182 94 7 87 249 2 174 2.98e-12 67.4
MS.gene013991.t1 AT5G44490 25.258 194 134 4 82 269 12 200 3.82e-12 67.0
MS.gene013991.t1 AT1G21990 30.729 192 118 6 84 268 6 189 3.86e-12 67.0
MS.gene013991.t1 AT1G56610 30.392 204 124 7 81 274 4 199 3.94e-12 67.0
MS.gene013991.t1 AT5G44960 32.105 190 114 7 87 268 5 187 3.97e-12 67.0
MS.gene013991.t1 AT1G32020 29.927 137 93 1 87 223 4 137 4.15e-12 63.9
MS.gene013991.t1 AT5G44490 25.258 194 134 4 82 269 12 200 5.78e-12 66.6
MS.gene013991.t1 AT1G56610 30.392 204 124 7 81 274 67 262 7.69e-12 66.2
MS.gene013991.t1 AT3G49020 33.628 226 134 9 75 295 10 224 9.94e-12 65.9
MS.gene013991.t1 AT5G38390 34.536 194 105 10 87 273 2 180 1.42e-11 65.5
MS.gene013991.t1 AT1G06630 29.167 240 147 10 77 304 3 231 1.44e-11 65.5
MS.gene013991.t1 AT1G06630 29.167 240 147 10 77 304 3 231 1.69e-11 64.3
MS.gene013991.t1 AT1G06630 29.167 240 147 10 77 304 3 231 2.21e-11 64.3
MS.gene013991.t1 AT1G06630 29.167 240 147 10 77 304 3 231 2.21e-11 64.3
MS.gene013991.t1 AT4G27050 30.583 206 111 6 87 268 4 201 2.22e-11 64.7
MS.gene013991.t1 AT4G27050 30.583 206 111 6 87 268 4 201 2.22e-11 64.7
MS.gene013991.t1 AT4G27050 30.583 206 111 6 87 268 4 201 2.22e-11 64.7
MS.gene013991.t1 AT4G27050 30.583 206 111 6 87 268 4 201 2.22e-11 64.7
MS.gene013991.t1 AT4G27050 30.583 206 111 6 87 268 4 201 2.22e-11 64.7
MS.gene013991.t1 AT3G26930 31.527 203 119 5 67 268 9 192 2.58e-11 64.7
MS.gene013991.t1 AT1G06630 29.167 240 147 10 77 304 3 231 3.10e-11 64.3
MS.gene013991.t1 AT1G06630 29.167 240 147 10 77 304 3 231 3.10e-11 64.3
MS.gene013991.t1 AT1G06630 29.167 240 147 10 77 304 3 231 3.10e-11 64.3
MS.gene013991.t1 AT1G06630 29.167 240 147 10 77 304 3 231 3.10e-11 64.3
MS.gene013991.t1 AT2G42720 33.333 198 119 9 87 274 2 196 3.14e-11 64.3
MS.gene013991.t1 AT3G03030 29.245 212 99 8 87 268 2 192 3.50e-11 64.3
MS.gene013991.t1 AT1G06630 29.167 240 147 10 77 304 12 240 3.63e-11 63.9
MS.gene013991.t1 AT3G03030 29.245 212 99 8 87 268 2 192 3.72e-11 63.5
MS.gene013991.t1 AT1G78840 32.275 189 111 7 85 268 3 179 6.07e-11 63.5
MS.gene013991.t1 AT1G78840 32.275 189 111 7 85 268 3 179 6.07e-11 63.5
MS.gene013991.t1 AT3G28410 28.788 198 117 8 85 275 26 206 6.46e-11 63.5
MS.gene013991.t1 AT5G41630 29.327 208 115 7 83 268 8 205 6.78e-11 63.2

Find 59 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTGTATCGTTTGCTTTAA+TGG 0.117202 7.2:-18941458 MS.gene013991:CDS
AGGTTACCCATTTCAATTTA+AGG 0.168343 7.2:+18940402 None:intergenic
AACGCATGGAACTTCATTTA+AGG 0.189952 7.2:+18940382 None:intergenic
TATATTTGCTCTGATCAAAT+TGG 0.267912 7.2:+18940199 None:intergenic
ATGTCCCATTCTACAAGATT+TGG 0.280455 7.2:-18940279 MS.gene013991:CDS
TGTCAGTCCTTAAATTGAAA+TGG 0.295237 7.2:-18940409 MS.gene013991:CDS
CATGATGGGTGGTAAGGATT+TGG 0.300084 7.2:+18941148 None:intergenic
ATAACTCGTCCCTCTGAATA+AGG 0.311183 7.2:+18940230 None:intergenic
ACATTCATATTGAGTTTGAT+TGG 0.360351 7.2:-18940172 MS.gene013991:CDS
AAAGTCGAAAACTTGAATTC+TGG 0.393751 7.2:-18941112 MS.gene013991:CDS
ATCGCTCAAAGCCCTTTACT+TGG 0.396202 7.2:-18940351 MS.gene013991:CDS
ATATAATAAAGAAGTGAATC+AGG 0.396925 7.2:+18940785 None:intergenic
TGTCCCATTCTACAAGATTT+GGG 0.397229 7.2:-18940278 MS.gene013991:CDS
ATGATGGGTGGTAAGGATTT+GGG 0.405132 7.2:+18941149 None:intergenic
GTTCCCAAATCTTGTAGAAT+GGG 0.415848 7.2:+18940275 None:intergenic
TGTTCCCAAATCTTGTAGAA+TGG 0.419222 7.2:+18940274 None:intergenic
GTCAGTCCTTAAATTGAAAT+GGG 0.423251 7.2:-18940408 MS.gene013991:CDS
CTCACAACTCTTCCTCAACT+TGG 0.429545 7.2:-18940690 MS.gene013991:CDS
CAAAGAGGTGGAGACCACTT+TGG 0.439052 7.2:-18940715 MS.gene013991:CDS
TGAGTTTACAAAATTGCAAA+AGG 0.464897 7.2:+18940640 None:intergenic
CTTTGTCGATCCGAAGGAAA+AGG 0.466633 7.2:+18941494 None:intergenic
AGTGACAACGTCCAAGTAAA+GGG 0.467135 7.2:+18940340 None:intergenic
TCTCATTCCATCTTGAATGT+TGG 0.467225 7.2:-18940583 MS.gene013991:CDS
AAGGTCGATGAGTCTTGAAA+TGG 0.499045 7.2:+18940659 None:intergenic
TTCTCACGTTTACCACATGA+TGG 0.504563 7.2:+18941133 None:intergenic
GTGTCTCTTCTTCCACGAAA+AGG 0.506376 7.2:-18941529 MS.gene013991:CDS
TTCAAGATGGAATGAGAGGA+TGG 0.514981 7.2:+18940589 None:intergenic
AAGTGACAACGTCCAAGTAA+AGG 0.514984 7.2:+18940339 None:intergenic
TTACCACATGATGGGTGGTA+AGG 0.525331 7.2:+18941142 None:intergenic
GCGTCGGAGTGGGATGGAGA+TGG 0.526919 7.2:-18941588 MS.gene013991:CDS
TGAAAGGATACTTGTGGTGG+CGG 0.534826 7.2:+18940736 None:intergenic
AAGTAAAGGGCTTTGAGCGA+TGG 0.539381 7.2:+18940353 None:intergenic
AGTAGTTCCAACATTCAAGA+TGG 0.564202 7.2:+18940576 None:intergenic
GTGGTCTCCACCTCTTTGAA+AGG 0.564630 7.2:+18940720 None:intergenic
CACTCCCTTTGTCGATCCGA+AGG 0.569271 7.2:+18941488 None:intergenic
AAGGATGCGTCGGAGTGGGA+TGG 0.573949 7.2:-18941594 None:intergenic
GTTGATATAGCAATTCAAAG+AGG 0.575630 7.2:-18940515 MS.gene013991:CDS
CAAGTATCCTTTCAAAGAGG+TGG 0.576187 7.2:-18940727 MS.gene013991:CDS
AGTAGAGTTACCTTATTCAG+AGG 0.577422 7.2:-18940240 MS.gene013991:CDS
AACATTCAAGATGGAATGAG+AGG 0.581599 7.2:+18940585 None:intergenic
TCTCACGTTTACCACATGAT+GGG 0.582496 7.2:+18941134 None:intergenic
GAAAACTTGAATTCTGGTAC+CGG 0.585555 7.2:-18941106 MS.gene013991:intron
GGCATCTTTAATCGAAACAA+AGG 0.586461 7.2:+18940757 None:intergenic
AAGAGTTGTGAGAGCCAAAG+TGG 0.590522 7.2:+18940701 None:intergenic
CACGTTTACCACATGATGGG+TGG 0.602180 7.2:+18941137 None:intergenic
AGTGAGAGAAGTCGATGTTG+AGG 0.604827 7.2:+18940483 None:intergenic
GAAAGATGGCAACATCATTG+TGG 0.616120 7.2:+18940451 None:intergenic
AGAGCGTCTGCGTGCAACTG+TGG 0.624551 7.2:-18940138 MS.gene013991:CDS
AGCGATGGAAGATTAACGCA+TGG 0.624931 7.2:+18940368 None:intergenic
GTAGAGTTACCTTATTCAGA+GGG 0.628380 7.2:-18940239 MS.gene013991:CDS
GGGTAGAGTGATATCTCGCA+TGG 0.629364 7.2:+18940610 None:intergenic
TCAAGATGGAATGAGAGGAT+GGG 0.639375 7.2:+18940590 None:intergenic
TTGGAACTACTACGATTGCA+AGG 0.643314 7.2:-18940564 MS.gene013991:CDS
CTTTGAAAGGATACTTGTGG+TGG 0.646263 7.2:+18940733 None:intergenic
CCTCTTTGAAAGGATACTTG+TGG 0.651836 7.2:+18940730 None:intergenic
AATCCTTACCACCCATCATG+TGG 0.655990 7.2:-18941145 MS.gene013991:CDS
CCACAAGTATCCTTTCAAAG+AGG 0.661710 7.2:-18940730 MS.gene013991:CDS
ATGGTTCGTCATCCAAGTTG+AGG 0.666740 7.2:+18940678 None:intergenic
CGATTGCAAGGATATCTACG+AGG 0.737687 7.2:-18940552 MS.gene013991:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTAGTTTTTAATTTTAAAAA+GGG - chr7.2:18940687-18940706 MS.gene013991:CDS 10.0%
!!! TAGTTTTTAATTTTAAAAAG+GGG - chr7.2:18940688-18940707 MS.gene013991:CDS 10.0%
!! AAAATTTACAAATCTAATGT+TGG + chr7.2:18940344-18940363 None:intergenic 15.0%
!! GATAAAATTTACATAAGATT+TGG - chr7.2:18940861-18940880 MS.gene013991:intron 15.0%
!! TATAAAATTATAGACTTTCT+AGG + chr7.2:18940479-18940498 None:intergenic 15.0%
!!! ATCTTATGTAAATTTTATCA+TGG + chr7.2:18940860-18940879 None:intergenic 15.0%
!!! CCTAGTTTTTAATTTTAAAA+AGG - chr7.2:18940686-18940705 MS.gene013991:CDS 15.0%
!!! CCTTTTTAAAATTAAAAACT+AGG + chr7.2:18940689-18940708 None:intergenic 15.0%
!!! CTTTTAATTTATCTTTTGAA+TGG - chr7.2:18940819-18940838 MS.gene013991:intron 15.0%
!!! TCATTGTTAATTTTAAATTG+TGG - chr7.2:18940732-18940751 MS.gene013991:CDS 15.0%
!! AGATAAATTAAAAGAGTTCA+AGG + chr7.2:18940813-18940832 None:intergenic 20.0%
!! ATATAATAAAGAAGTGAATC+AGG + chr7.2:18940941-18940960 None:intergenic 20.0%
!! GATAAATTAAAAGAGTTCAA+GGG + chr7.2:18940812-18940831 None:intergenic 20.0%
!! TTTAACTACAATGTAGTATT+TGG - chr7.2:18940421-18940440 MS.gene013991:CDS 20.0%
!!! AATTTTATAAACTGTTCGTA+TGG - chr7.2:18940490-18940509 MS.gene013991:CDS 20.0%
!!! TATATTTTGAAGCTTTTATC+AGG - chr7.2:18941421-18941440 MS.gene013991:intron 20.0%
!!! TGTAAATTTTATCATGGTAA+TGG + chr7.2:18940854-18940873 None:intergenic 20.0%
!!! TGTTTTTTCTGTGTTTTTTA+GGG - chr7.2:18940547-18940566 MS.gene013991:CDS 20.0%
!!! TTGTTTTTTCTGTGTTTTTT+AGG - chr7.2:18940546-18940565 MS.gene013991:CDS 20.0%
! ACATTCATATTGAGTTTGAT+TGG - chr7.2:18941551-18941570 MS.gene013991:CDS 25.0%
! ATTCTCGTTATTCAATTCTA+GGG - chr7.2:18940894-18940913 MS.gene013991:intron 25.0%
! TATATTTGCTCTGATCAAAT+TGG + chr7.2:18941527-18941546 None:intergenic 25.0%
! TGAGTTTACAAAATTGCAAA+AGG + chr7.2:18941086-18941105 None:intergenic 25.0%
!!! GTTTTTTCTGTGTTTTTTAG+GGG - chr7.2:18940548-18940567 MS.gene013991:CDS 25.0%
AAAGTCGAAAACTTGAATTC+TGG - chr7.2:18940611-18940630 MS.gene013991:CDS 30.0%
ACTTTCTAGGTCAGTAAATT+AGG + chr7.2:18940466-18940485 None:intergenic 30.0%
AGGTTACCCATTTCAATTTA+AGG + chr7.2:18941324-18941343 None:intergenic 30.0%
CTTTCTAGGTCAGTAAATTA+GGG + chr7.2:18940465-18940484 None:intergenic 30.0%
GATTCTCGTTATTCAATTCT+AGG - chr7.2:18940893-18940912 MS.gene013991:intron 30.0%
GTCAGTCCTTAAATTGAAAT+GGG - chr7.2:18941315-18941334 MS.gene013991:intron 30.0%
GTTGATATAGCAATTCAAAG+AGG - chr7.2:18941208-18941227 MS.gene013991:intron 30.0%
TGAAGAAAATTGTAGAGAGT+TGG + chr7.2:18940657-18940676 None:intergenic 30.0%
TGTCAGTCCTTAAATTGAAA+TGG - chr7.2:18941314-18941333 MS.gene013991:intron 30.0%
TTCTCGTTATTCAATTCTAG+GGG - chr7.2:18940895-18940914 MS.gene013991:intron 30.0%
TTGCTACTAAAAACGAAAGA+TGG + chr7.2:18941289-18941308 None:intergenic 30.0%
! AAATTTTCTCTTCCTTTTCG+TGG + chr7.2:18940209-18940228 None:intergenic 30.0%
! CAATTTTGTAAACTCACTCA+TGG - chr7.2:18941090-18941109 MS.gene013991:intron 30.0%
! GAGAAAATTTCCTTTTCCTT+CGG - chr7.2:18940219-18940238 MS.gene013991:CDS 30.0%
!! GGATGAATTTTAAGTACAGT+GGG - chr7.2:18940170-18940189 MS.gene013991:CDS 30.0%
AACATTCAAGATGGAATGAG+AGG + chr7.2:18941141-18941160 None:intergenic 35.0%
AACGCATGGAACTTCATTTA+AGG + chr7.2:18941344-18941363 None:intergenic 35.0%
AGTAGAGTTACCTTATTCAG+AGG - chr7.2:18941483-18941502 MS.gene013991:CDS 35.0%
AGTAGTTCCAACATTCAAGA+TGG + chr7.2:18941150-18941169 None:intergenic 35.0%
ATGTCCCATTCTACAAGATT+TGG - chr7.2:18941444-18941463 MS.gene013991:CDS 35.0%
GAAAACTTGAATTCTGGTAC+CGG - chr7.2:18940617-18940636 MS.gene013991:CDS 35.0%
GACTGTATCGTTTGCTTTAA+TGG - chr7.2:18940265-18940284 MS.gene013991:CDS 35.0%
GGCATCTTTAATCGAAACAA+AGG + chr7.2:18940969-18940988 None:intergenic 35.0%
GTAGAGTTACCTTATTCAGA+GGG - chr7.2:18941484-18941503 MS.gene013991:CDS 35.0%
GTTCCCAAATCTTGTAGAAT+GGG + chr7.2:18941451-18941470 None:intergenic 35.0%
GTTGGAAAGAGAAAACTTAC+CGG + chr7.2:18940639-18940658 None:intergenic 35.0%
TCTCATTCCATCTTGAATGT+TGG - chr7.2:18941140-18941159 MS.gene013991:CDS 35.0%
TGTCCCATTCTACAAGATTT+GGG - chr7.2:18941445-18941464 MS.gene013991:CDS 35.0%
TGTTCCCAAATCTTGTAGAA+TGG + chr7.2:18941452-18941471 None:intergenic 35.0%
! CTCTACAATTTTCTTCATCG+TGG - chr7.2:18940660-18940679 MS.gene013991:CDS 35.0%
!! GGGATGAATTTTAAGTACAG+TGG - chr7.2:18940169-18940188 MS.gene013991:CDS 35.0%
!!! ATGGAGATGGACTCTTTTTT+TGG - chr7.2:18940148-18940167 MS.gene013991:CDS 35.0%
!!! TGGAGATGGACTCTTTTTTT+GGG - chr7.2:18940149-18940168 MS.gene013991:CDS 35.0%
AAGGTCGATGAGTCTTGAAA+TGG + chr7.2:18941067-18941086 None:intergenic 40.0%
AAGTGACAACGTCCAAGTAA+AGG + chr7.2:18941387-18941406 None:intergenic 40.0%
AGTGACAACGTCCAAGTAAA+GGG + chr7.2:18941386-18941405 None:intergenic 40.0%
ATAACTCGTCCCTCTGAATA+AGG + chr7.2:18941496-18941515 None:intergenic 40.0%
CAAGTATCCTTTCAAAGAGG+TGG - chr7.2:18940996-18941015 MS.gene013991:intron 40.0%
CCACAAGTATCCTTTCAAAG+AGG - chr7.2:18940993-18941012 MS.gene013991:intron 40.0%
GAAAGATGGCAACATCATTG+TGG + chr7.2:18941275-18941294 None:intergenic 40.0%
TCAAGATGGAATGAGAGGAT+GGG + chr7.2:18941136-18941155 None:intergenic 40.0%
TCTCACGTTTACCACATGAT+GGG + chr7.2:18940592-18940611 None:intergenic 40.0%
TTCAAGATGGAATGAGAGGA+TGG + chr7.2:18941137-18941156 None:intergenic 40.0%
TTCTCACGTTTACCACATGA+TGG + chr7.2:18940593-18940612 None:intergenic 40.0%
TTGGAACTACTACGATTGCA+AGG - chr7.2:18941159-18941178 MS.gene013991:intron 40.0%
! CCTCTTTGAAAGGATACTTG+TGG + chr7.2:18940996-18941015 None:intergenic 40.0%
! CTGTTCGTATGGACTACAAT+TGG - chr7.2:18940501-18940520 MS.gene013991:CDS 40.0%
! CTTTGAAAGGATACTTGTGG+TGG + chr7.2:18940993-18941012 None:intergenic 40.0%
! TTTTCCTTCGGATCGACAAA+GGG - chr7.2:18940231-18940250 MS.gene013991:CDS 40.0%
!! ATGATGGGTGGTAAGGATTT+GGG + chr7.2:18940577-18940596 None:intergenic 40.0%
AAGAGTTGTGAGAGCCAAAG+TGG + chr7.2:18941025-18941044 None:intergenic 45.0%
AATCCTTACCACCCATCATG+TGG - chr7.2:18940578-18940597 MS.gene013991:CDS 45.0%
AGCGATGGAAGATTAACGCA+TGG + chr7.2:18941358-18941377 None:intergenic 45.0%
AGTGAGAGAAGTCGATGTTG+AGG + chr7.2:18941243-18941262 None:intergenic 45.0%
ATCGCTCAAAGCCCTTTACT+TGG - chr7.2:18941372-18941391 MS.gene013991:intron 45.0%
ATGGTTCGTCATCCAAGTTG+AGG + chr7.2:18941048-18941067 None:intergenic 45.0%
CGATTGCAAGGATATCTACG+AGG - chr7.2:18941171-18941190 MS.gene013991:intron 45.0%
CTCACAACTCTTCCTCAACT+TGG - chr7.2:18941033-18941052 MS.gene013991:intron 45.0%
CTTTGTCGATCCGAAGGAAA+AGG + chr7.2:18940232-18940251 None:intergenic 45.0%
GTGTCTCTTCTTCCACGAAA+AGG - chr7.2:18940194-18940213 MS.gene013991:CDS 45.0%
TGAAAGGATACTTGTGGTGG+CGG + chr7.2:18940990-18941009 None:intergenic 45.0%
! CTTTTCCTTCGGATCGACAA+AGG - chr7.2:18940230-18940249 MS.gene013991:CDS 45.0%
!! AAGTAAAGGGCTTTGAGCGA+TGG + chr7.2:18941373-18941392 None:intergenic 45.0%
!! CATGATGGGTGGTAAGGATT+TGG + chr7.2:18940578-18940597 None:intergenic 45.0%
!! TTACCACATGATGGGTGGTA+AGG + chr7.2:18940584-18940603 None:intergenic 45.0%
CAAAGAGGTGGAGACCACTT+TGG - chr7.2:18941008-18941027 MS.gene013991:intron 50.0%
GGGTAGAGTGATATCTCGCA+TGG + chr7.2:18941116-18941135 None:intergenic 50.0%
GTGGTCTCCACCTCTTTGAA+AGG + chr7.2:18941006-18941025 None:intergenic 50.0%
! CACGTTTACCACATGATGGG+TGG + chr7.2:18940589-18940608 None:intergenic 50.0%
CACTCCCTTTGTCGATCCGA+AGG + chr7.2:18940238-18940257 None:intergenic 55.0%
! AGAGCGTCTGCGTGCAACTG+TGG - chr7.2:18941585-18941604 MS.gene013991:CDS 60.0%
GCGTCGGAGTGGGATGGAGA+TGG - chr7.2:18940135-18940154 MS.gene013991:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 18940133 18941612 18940133 ID=MS.gene013991
chr7.2 mRNA 18940133 18941612 18940133 ID=MS.gene013991.t1;Parent=MS.gene013991
chr7.2 exon 18941431 18941612 18941431 ID=MS.gene013991.t1.exon1;Parent=MS.gene013991.t1
chr7.2 CDS 18941431 18941612 18941431 ID=cds.MS.gene013991.t1;Parent=MS.gene013991.t1
chr7.2 exon 18941107 18941177 18941107 ID=MS.gene013991.t1.exon2;Parent=MS.gene013991.t1
chr7.2 CDS 18941107 18941177 18941107 ID=cds.MS.gene013991.t1;Parent=MS.gene013991.t1
chr7.2 exon 18940133 18940830 18940133 ID=MS.gene013991.t1.exon3;Parent=MS.gene013991.t1
chr7.2 CDS 18940133 18940830 18940133 ID=cds.MS.gene013991.t1;Parent=MS.gene013991.t1
Gene Sequence

>MS.gene013991

ATGCGTCGGAGTGGGATGGAGATGGACTCTTTTTTTGGGATGAATTTTAAGTACAGTGGGAGTGTCTCTTCTTCCACGAAAAGGAAGAGAAAATTTCCTTTTCCTTCGGATCGACAAAGGGAGTGTTATGAAGACTGTATCGTTTGCTTTAATGGAGACGACTTTGAGCTGTGTGATCGCATGTGAGAATTGATACTGACTGCTATTGCCAACATTAGATTTGTAAATTTTTGTTGATGTGTTAATGCTTTTTTAAGAGATTGTATTTATGTTTATGAAGTTCTTTTTTTTAACTACAATGTAGTATTTGGAATTAAAGACTCTTTAAACCCTAATTTACTGACCTAGAAAGTCTATAATTTTATAAACTGTTCGTATGGACTACAATTGGCATTTACTATTTTGAAAATTCATTGTTTTTTCTGTGTTTTTTAGGGGATGCCCAAATCCTTACCACCCATCATGTGGTAAACGTGAGAAAGTCGAAAACTTGAATTCTGGTACCGGTAAGTTTTCTCTTTCCAACTCTCTACAATTTTCTTCATCGTGGATTCCTAGTTTTTAATTTTAAAAAGGGGTGCACTCGTTCAATGAGAATTTCATTGTTAATTTTAAATTGTGGTTATAAATGAGACTTGCATTACGTCACAATATCAGAGTTCTTGTTAGTGAAACTCCCTTGAACTCTTTTAATTTATCTTTTGAATGGTTACATTCTCCATTACCATGATAAAATTTACATAAGATTTGGTTTTGATGTGATTCTCGTTATTCAATTCTAGGGGAAGACAAAATAAGTGCGCTACCTGATTCACTTCTTTATTATATTCTTTCCTTTGTTTCGATTAAAGATGCCGCCACCACAAGTATCCTTTCAAAGAGGTGGAGACCACTTTGGCTCTCACAACTCTTCCTCAACTTGGATGACGAACCATTTCAAGACTCATCGACCTTTTGCAATTTTGTAAACTCACTCATGGCCATGCGAGATATCACTCTACCCATCCTCTCATTCCATCTTGAATGTTGGAACTACTACGATTGCAAGGATATCTACGAGGATATCTACAAATTTGTTGATATAGCAATTCAAAGAGGAGTTGAGAACCTCAACATCGACTTCTCTCACTCACTTTTTTCCACAATGATGTTGCCATCTTTCGTTTTTAGTAGCAAAACATTGTCAGTCCTTAAATTGAAATGGGTAACCTTAAATGAAGTTCCATGCGTTAATCTTCCATCGCTCAAAGCCCTTTACTTGGACGTTGTCACTTTCACATATTATGAATATATTTTGAAGCTTTTATCAGGATGTCCCATTCTACAAGATTTGGGAACAAATGATTTACGAGTAGAGTTACCTTATTCAGAGGGACGAGTTATAAGTTTGTCCAATTTGATCAGAGCAAATATATGTAACATTCATATTGAGTTTGATTGGCTTCAAAACGTAGAGCGTCTGCGTGCAACTGTGGTATGA

Protein sequence

>MS.gene013991.t1

MRRSGMEMDSFFGMNFKYSGSVSSSTKRKRKFPFPSDRQRECYEDCIVCFNGDDFELCDRMGCPNPYHPSCGKREKVENLNSGTGEDKISALPDSLLYYILSFVSIKDAATTSILSKRWRPLWLSQLFLNLDDEPFQDSSTFCNFVNSLMAMRDITLPILSFHLECWNYYDCKDIYEDIYKFVDIAIQRGVENLNIDFSHSLFSTMMLPSFVFSSKTLSVLKLKWVTLNEVPCVNLPSLKALYLDVVTFTYYEYILKLLSGCPILQDLGTNDLRVELPYSEGRVISLSNLIRANICNIHIEFDWLQNVERLRATVV