AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045451


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045451.t1 MTR_4g080590 94.737 456 23 1 1 455 1 456 0.0 873
MS.gene045451.t1 MTR_4g080590 94.199 362 20 1 1 361 1 362 0.0 686
MS.gene045451.t1 MTR_3g048290 47.021 470 233 6 1 455 1 469 3.02e-123 367
MS.gene045451.t1 MTR_4g080787 46.008 476 228 8 1 455 1 468 9.01e-122 364
MS.gene045451.t1 MTR_4g130200 46.903 452 171 7 1 447 1 388 2.02e-116 347
MS.gene045451.t1 MTR_4g080773 44.563 469 234 8 1 448 1 464 5.69e-112 339
MS.gene045451.t1 MTR_4g080773 44.563 469 234 8 1 448 1 464 8.45e-112 339
MS.gene045451.t1 MTR_5g039950 44.662 459 207 6 1 451 1 420 2.64e-109 330
MS.gene045451.t1 MTR_7g023310 45.161 465 231 12 1 450 1 456 4.03e-103 315
MS.gene045451.t1 MTR_5g039970 53.870 323 141 4 5 319 1 323 1.44e-98 299
MS.gene045451.t1 MTR_7g023330 41.048 458 194 12 6 451 3 396 1.22e-87 273
MS.gene045451.t1 MTR_7g039630 43.784 370 165 6 1 359 1 338 1.21e-78 248
MS.gene045451.t1 MTR_4g080807 42.458 358 166 7 90 442 1 323 2.72e-69 226
MS.gene045451.t1 MTR_2g094750 43.011 372 175 13 21 357 88 457 1.11e-62 211
MS.gene045451.t1 MTR_4g081030 36.997 373 207 9 13 370 7 366 6.09e-52 180
MS.gene045451.t1 MTR_5g005690 27.766 461 270 12 9 418 3 451 2.62e-32 129
MS.gene045451.t1 MTR_2g072530 25.917 436 308 11 15 441 5 434 3.22e-25 107
MS.gene045451.t1 MTR_5g080710 28.000 425 275 15 6 419 17 421 2.26e-23 102
MS.gene045451.t1 MTR_4g045900 24.646 495 288 18 23 445 26 507 3.10e-23 102
MS.gene045451.t1 MTR_4g080813 59.722 72 29 0 5 76 1 72 1.52e-22 92.0
MS.gene045451.t1 MTR_8g467800 27.083 432 269 15 14 418 11 423 1.49e-21 97.1
MS.gene045451.t1 MTR_1g082260 40.278 144 83 1 73 213 23 166 2.23e-21 91.7
MS.gene045451.t1 MTR_5g084070 26.055 403 272 10 23 419 13 395 4.82e-21 95.5
MS.gene045451.t1 MTR_7g094030 26.517 445 262 17 12 420 19 434 7.55e-19 89.0
MS.gene045451.t1 MTR_4g032845 24.829 439 297 15 21 438 1 427 7.29e-18 85.9
MS.gene045451.t1 MTR_8g062270 27.517 447 275 18 20 434 13 442 9.99e-18 85.5
MS.gene045451.t1 MTR_1g090883 27.913 369 219 13 15 359 11 356 1.12e-17 84.7
MS.gene045451.t1 MTR_2g007500 27.720 386 199 18 23 395 14 332 1.93e-17 83.6
MS.gene045451.t1 MTR_0049s0110 25.359 418 261 14 23 423 8 391 3.78e-17 83.6
MS.gene045451.t1 MTR_2g082800 26.253 419 256 18 9 406 15 401 1.11e-16 82.0
MS.gene045451.t1 MTR_7g026500 25.556 450 214 16 23 434 14 380 4.40e-16 80.1
MS.gene045451.t1 MTR_2g082850 26.211 351 234 12 22 355 21 363 4.95e-16 79.7
MS.gene045451.t1 MTR_7g088260 25.926 432 226 19 17 429 85 441 1.74e-15 79.0
MS.gene045451.t1 MTR_3g448340 25.806 434 271 17 23 418 6 426 2.00e-15 78.6
MS.gene045451.t1 MTR_5g083890 22.870 446 247 12 22 432 5 388 7.41e-15 77.0
MS.gene045451.t1 MTR_3g108150 24.941 425 231 16 22 429 12 365 1.04e-14 75.9
MS.gene045451.t1 MTR_0049s0110 30.918 207 132 7 23 224 8 208 1.13e-14 74.7
MS.gene045451.t1 MTR_7g075820 23.888 427 232 16 22 419 5 367 1.40e-14 75.5
MS.gene045451.t1 MTR_1g038710 26.056 426 270 18 23 419 19 428 1.74e-14 75.9
MS.gene045451.t1 MTR_5g073420 23.543 429 241 15 23 438 11 365 1.91e-14 75.1
MS.gene045451.t1 MTR_3g108560 23.944 426 239 16 17 429 14 367 2.03e-14 75.1
MS.gene045451.t1 MTR_7g098510 24.541 436 232 18 7 421 2 361 2.10e-14 75.1
MS.gene045451.t1 MTR_2g091145 25.754 431 252 17 23 423 21 413 2.55e-14 75.1
MS.gene045451.t1 MTR_0049s0110 30.918 207 132 7 23 224 8 208 3.25e-14 73.9
MS.gene045451.t1 MTR_0049s0110 30.918 207 132 7 23 224 8 208 3.82e-14 73.9
MS.gene045451.t1 MTR_8g467800 27.473 273 180 9 14 275 11 276 4.28e-14 73.6
MS.gene045451.t1 MTR_2g072720 23.956 455 308 14 11 444 31 468 4.52e-14 74.3
MS.gene045451.t1 MTR_3g107160 31.373 204 103 7 20 202 7 194 1.16e-13 72.8
MS.gene045451.t1 MTR_2g047848 26.014 419 253 16 23 416 7 393 1.35e-13 72.8
MS.gene045451.t1 MTR_7g056433 25.116 430 231 16 20 429 9 367 2.19e-13 72.0
MS.gene045451.t1 MTR_1g038760 26.171 363 232 11 14 359 6 349 2.20e-13 71.6
MS.gene045451.t1 MTR_1g013630 29.592 196 123 7 23 206 39 231 3.38e-13 71.2
MS.gene045451.t1 MTR_8g066650 28.049 328 219 9 16 335 73 391 3.40e-13 71.6
MS.gene045451.t1 MTR_6g018660 24.444 360 215 12 12 338 9 344 3.40e-13 71.2
MS.gene045451.t1 MTR_8g468840 25.059 427 273 18 21 418 12 420 4.59e-13 71.2
MS.gene045451.t1 MTR_1g038760 25.602 332 218 8 14 335 6 318 1.27e-12 69.3
MS.gene045451.t1 MTR_1g011410 28.054 221 115 6 18 226 2 190 1.30e-12 70.5
MS.gene045451.t1 MTR_8g058965 26.471 442 268 18 14 419 4 424 1.74e-12 69.3
MS.gene045451.t1 MTR_4g032730 22.796 465 303 17 20 443 12 461 2.19e-12 69.3
MS.gene045451.t1 MTR_3g023330 26.703 367 226 13 12 352 2 351 2.22e-12 68.6
MS.gene045451.t1 MTR_1g011430 27.876 226 151 6 23 239 7 229 4.05e-12 67.8
MS.gene045451.t1 MTR_1g021825 28.378 222 124 8 23 226 17 221 4.16e-12 68.2
MS.gene045451.t1 MTR_5g038430 30.180 222 141 9 14 226 87 303 4.37e-12 68.6
MS.gene045451.t1 MTR_1g021825 28.378 222 124 8 23 226 88 292 4.70e-12 68.2
MS.gene045451.t1 MTR_7g055943 24.490 441 250 16 4 426 21 396 8.82e-12 67.0
MS.gene045451.t1 MTR_1g021820 30.263 228 132 10 23 232 28 246 1.04e-11 67.0
MS.gene045451.t1 MTR_6g088700 27.660 329 214 12 22 338 13 329 1.08e-11 66.6
MS.gene045451.t1 MTR_8g017280 27.053 207 124 6 22 208 35 234 1.18e-11 65.9
MS.gene045451.t1 MTR_2g072730 23.991 446 284 16 1 417 1 420 1.25e-11 67.0
MS.gene045451.t1 MTR_0227s0010 30.049 203 125 8 14 205 6 202 1.28e-11 66.2
MS.gene045451.t1 MTR_2g094450 36.872 179 83 9 195 362 31 190 1.33e-11 63.9
MS.gene045451.t1 MTR_7g098480 23.488 430 236 15 7 418 2 356 1.53e-11 66.6
MS.gene045451.t1 MTR_3g036250 22.034 413 231 14 23 421 5 340 1.59e-11 65.9
MS.gene045451.t1 MTR_3g107100 23.961 409 241 14 20 418 8 356 1.85e-11 66.2
MS.gene045451.t1 MTR_8g017280 27.053 207 124 6 22 208 35 234 2.67e-11 65.5
MS.gene045451.t1 MTR_1g014450 27.876 226 145 9 23 234 16 237 3.68e-11 65.5
MS.gene045451.t1 MTR_2g082880 23.923 418 280 14 20 420 7 403 6.39e-11 64.3
MS.gene045451.t1 MTR_3g026920 23.990 421 241 15 21 418 17 381 8.35e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045451.t1 AT4G14096 28.105 459 284 16 22 450 7 449 1.90e-31 126
MS.gene045451.t1 AT4G14096 28.105 459 284 16 22 450 7 449 1.90e-31 126
MS.gene045451.t1 AT3G58880 29.398 432 258 16 21 419 1 418 9.71e-31 124
MS.gene045451.t1 AT3G58860 28.603 451 288 15 23 451 7 445 3.47e-30 122
MS.gene045451.t1 AT3G59210 29.806 463 263 17 22 441 6 449 4.19e-30 122
MS.gene045451.t1 AT3G59210 29.806 463 263 17 22 441 6 449 4.19e-30 122
MS.gene045451.t1 AT3G59210 29.806 463 263 17 22 441 6 449 4.19e-30 122
MS.gene045451.t1 AT3G59210 29.806 463 263 17 22 441 6 449 4.19e-30 122
MS.gene045451.t1 AT3G59210 29.806 463 263 17 22 441 6 449 4.19e-30 122
MS.gene045451.t1 AT5G53840 27.907 430 288 13 19 441 14 428 1.33e-27 114
MS.gene045451.t1 AT4G14103 26.667 450 277 16 22 450 7 424 5.88e-27 112
MS.gene045451.t1 AT1G78840 29.691 421 251 16 22 418 4 403 6.64e-27 112
MS.gene045451.t1 AT1G78840 29.691 421 251 16 22 418 4 403 6.64e-27 112
MS.gene045451.t1 AT4G14103 28.571 357 231 11 22 361 7 356 7.04e-27 111
MS.gene045451.t1 AT4G14103 28.571 357 231 11 22 361 7 356 7.04e-27 111
MS.gene045451.t1 AT3G58900 28.604 437 258 15 23 419 2 424 8.76e-27 112
MS.gene045451.t1 AT3G59230 26.834 477 293 20 14 446 4 468 1.82e-25 108
MS.gene045451.t1 AT4G13965 26.498 434 284 14 23 446 10 418 5.15e-25 107
MS.gene045451.t1 AT1G32375 26.859 417 256 15 23 418 2 390 2.80e-24 105
MS.gene045451.t1 AT1G32375 26.859 417 256 15 23 418 2 390 2.80e-24 105
MS.gene045451.t1 AT5G56420 25.057 435 294 13 22 446 5 417 6.59e-24 103
MS.gene045451.t1 AT5G56420 25.057 435 294 13 22 446 5 417 6.59e-24 103
MS.gene045451.t1 AT5G56420 25.057 435 294 13 22 446 5 417 6.59e-24 103
MS.gene045451.t1 AT5G44950 26.014 419 272 12 22 418 3 405 8.40e-24 103
MS.gene045451.t1 AT3G03030 26.897 435 280 13 23 423 2 432 9.69e-24 103
MS.gene045451.t1 AT3G59200 25.840 476 263 19 22 434 6 454 1.31e-23 103
MS.gene045451.t1 AT1G51370 27.689 437 256 18 17 429 13 413 2.47e-23 102
MS.gene045451.t1 AT2G42730 26.588 425 278 13 20 418 2 418 2.66e-23 102
MS.gene045451.t1 AT3G59240 26.577 444 285 15 22 433 7 441 6.80e-23 101
MS.gene045451.t1 AT1G55030 25.301 415 263 15 16 414 12 395 6.97e-23 100
MS.gene045451.t1 AT1G55030 25.180 417 261 15 16 414 2 385 7.70e-23 100
MS.gene045451.t1 AT4G22280 28.054 442 275 16 23 451 2 413 1.30e-22 100
MS.gene045451.t1 AT5G53635 28.810 420 257 15 24 418 1 403 1.56e-22 99.8
MS.gene045451.t1 AT1G66290 25.891 421 287 13 19 428 25 431 1.58e-22 100
MS.gene045451.t1 AT5G25860 26.824 425 264 13 22 418 11 416 1.77e-22 100
MS.gene045451.t1 AT3G59250 28.434 415 247 14 22 419 6 387 4.58e-22 98.6
MS.gene045451.t1 AT5G22720 27.483 433 252 16 22 416 22 430 4.79e-22 99.0
MS.gene045451.t1 AT1G66300 25.176 425 289 14 23 433 29 438 1.13e-21 97.4
MS.gene045451.t1 AT4G22280 30.571 350 209 12 23 359 2 330 1.35e-21 95.9
MS.gene045451.t1 AT1G13780 24.839 467 292 18 23 451 10 455 1.48e-21 97.4
MS.gene045451.t1 AT1G16930 24.941 421 279 13 23 418 15 423 1.67e-21 97.1
MS.gene045451.t1 AT1G16930 24.941 421 279 13 23 418 15 423 1.67e-21 97.1
MS.gene045451.t1 AT1G16930 24.941 421 279 13 23 418 15 423 1.67e-21 97.1
MS.gene045451.t1 AT3G59170 28.761 452 253 18 22 419 6 442 1.91e-21 97.1
MS.gene045451.t1 AT1G58310 27.649 387 228 13 17 361 2 378 2.62e-21 97.1
MS.gene045451.t1 AT3G50710 25.618 445 282 16 23 445 2 419 2.88e-21 96.3
MS.gene045451.t1 AT3G03040 26.437 435 269 15 23 419 2 423 4.51e-21 95.9
MS.gene045451.t1 AT3G28410 26.888 331 201 14 12 328 19 322 8.27e-21 95.1
MS.gene045451.t1 AT5G38590 25.114 438 285 13 23 446 2 410 8.85e-21 94.4
MS.gene045451.t1 AT3G58930 25.850 441 275 14 23 419 2 434 2.09e-20 94.0
MS.gene045451.t1 AT3G58930 25.850 441 275 14 23 419 2 434 2.09e-20 94.0
MS.gene045451.t1 AT3G58930 25.850 441 275 14 23 419 2 434 2.09e-20 94.0
MS.gene045451.t1 AT4G10400 25.799 438 282 14 23 449 2 407 5.50e-20 92.0
MS.gene045451.t1 AT4G10400 25.799 438 282 14 23 449 2 407 5.50e-20 92.0
MS.gene045451.t1 AT4G10400 25.799 438 282 14 23 449 2 407 5.50e-20 92.0
MS.gene045451.t1 AT3G26922 27.652 264 180 6 15 273 6 263 7.09e-20 90.5
MS.gene045451.t1 AT3G26922 27.652 264 180 6 15 273 6 263 7.09e-20 90.5
MS.gene045451.t1 AT3G49030 25.056 443 284 19 22 445 20 433 7.26e-20 92.0
MS.gene045451.t1 AT3G59000 26.484 438 267 15 23 419 2 425 7.41e-20 92.4
MS.gene045451.t1 AT5G56440 26.392 413 270 10 23 418 2 397 8.63e-20 91.7
MS.gene045451.t1 AT1G66320 25.629 437 289 16 17 434 23 442 9.73e-20 91.7
MS.gene045451.t1 AT5G56400 24.887 442 298 10 23 451 33 453 1.26e-19 91.7
MS.gene045451.t1 AT4G00160 25.734 443 287 14 22 445 15 434 1.71e-19 90.9
MS.gene045451.t1 AT5G22730 24.163 418 282 11 22 416 27 432 2.55e-19 90.5
MS.gene045451.t1 AT5G22730 24.163 418 282 11 22 416 27 432 2.55e-19 90.5
MS.gene045451.t1 AT5G41840 29.275 386 223 15 18 361 9 386 2.71e-19 90.9
MS.gene045451.t1 AT2G29930 27.500 440 262 21 14 418 4 421 2.87e-19 90.5
MS.gene045451.t1 AT2G29930 27.500 440 262 21 14 418 4 421 2.87e-19 90.5
MS.gene045451.t1 AT1G78750 24.888 446 312 14 23 450 18 458 4.01e-19 90.1
MS.gene045451.t1 AT1G78750 24.888 446 312 14 23 450 18 458 4.01e-19 90.1
MS.gene045451.t1 AT5G02700 26.911 327 207 13 11 328 17 320 4.35e-19 89.7
MS.gene045451.t1 AT3G58980 26.862 443 273 17 23 431 2 427 4.36e-19 90.5
MS.gene045451.t1 AT3G59160 27.411 394 220 12 22 361 12 393 6.18e-19 89.4
MS.gene045451.t1 AT1G06630 27.966 354 226 12 22 359 11 351 6.21e-19 88.6
MS.gene045451.t1 AT1G06630 27.966 354 226 12 22 359 11 351 6.21e-19 88.6
MS.gene045451.t1 AT4G00315 31.250 240 145 8 23 252 2 231 7.88e-19 89.0
MS.gene045451.t1 AT3G58960 26.106 452 263 18 23 419 2 437 8.24e-19 89.0
MS.gene045451.t1 AT3G44060 24.194 434 307 11 28 451 4 425 8.70e-19 88.6
MS.gene045451.t1 AT5G56810 24.449 454 298 14 15 450 5 431 8.81e-19 88.6
MS.gene045451.t1 AT1G51370 27.735 393 227 16 17 386 13 371 9.98e-19 88.6
MS.gene045451.t1 AT1G51370 30.667 225 120 7 17 226 13 216 1.35e-18 87.4
MS.gene045451.t1 AT1G06630 27.966 354 226 12 22 359 20 360 1.49e-18 87.8
MS.gene045451.t1 AT1G06630 27.966 354 226 12 22 359 11 351 1.60e-18 87.8
MS.gene045451.t1 AT1G06630 27.966 354 226 12 22 359 11 351 1.60e-18 87.8
MS.gene045451.t1 AT1G06630 27.966 354 226 12 22 359 11 351 1.60e-18 87.8
MS.gene045451.t1 AT1G06630 27.966 354 226 12 22 359 11 351 1.60e-18 87.8
MS.gene045451.t1 AT5G56380 25.734 443 289 17 23 443 2 426 1.64e-18 87.8
MS.gene045451.t1 AT5G56380 25.734 443 289 17 23 443 2 426 1.64e-18 87.8
MS.gene045451.t1 AT5G22660 26.265 415 276 12 22 418 12 414 2.08e-18 87.8
MS.gene045451.t1 AT3G59190 26.781 407 251 15 22 399 11 399 2.31e-18 87.8
MS.gene045451.t1 AT5G56810 26.937 271 178 7 15 273 5 267 3.26e-18 85.5
MS.gene045451.t1 AT1G06630 27.966 354 226 12 22 359 11 351 3.28e-18 87.4
MS.gene045451.t1 AT5G38590 31.280 211 135 5 23 228 2 207 4.37e-18 84.7
MS.gene045451.t1 AT3G58900 28.972 321 191 11 23 314 2 314 5.22e-18 85.1
MS.gene045451.t1 AT1G66310 27.014 422 277 16 12 418 8 413 5.35e-18 86.3
MS.gene045451.t1 AT5G02930 26.197 355 228 14 23 360 28 365 8.59e-18 85.9
MS.gene045451.t1 AT4G13960 25.935 428 273 13 23 419 2 416 9.90e-18 85.9
MS.gene045451.t1 AT4G13960 25.935 428 273 13 23 419 2 416 9.90e-18 85.9
MS.gene045451.t1 AT1G69630 25.059 427 288 14 11 418 6 419 1.16e-17 85.5
MS.gene045451.t1 AT5G22670 25.728 412 280 12 22 418 10 410 1.24e-17 85.5
MS.gene045451.t1 AT4G10420 27.397 292 172 11 140 418 27 291 1.32e-17 84.0
MS.gene045451.t1 AT3G52680 26.147 436 281 15 22 441 20 430 1.46e-17 85.1
MS.gene045451.t1 AT3G58900 28.840 319 190 11 23 312 2 312 1.78e-17 83.6
MS.gene045451.t1 AT3G58900 28.840 319 190 11 23 312 2 312 1.78e-17 83.6
MS.gene045451.t1 AT3G59190 27.671 365 227 14 22 357 11 367 2.25e-17 84.0
MS.gene045451.t1 AT5G50270 26.777 422 254 16 23 418 2 394 2.66e-17 84.0
MS.gene045451.t1 AT5G44980 23.185 427 301 12 22 431 3 419 3.02e-17 84.0
MS.gene045451.t1 AT5G44980 23.185 427 301 12 22 431 3 419 3.02e-17 84.0
MS.gene045451.t1 AT5G41830 25.558 403 241 16 22 383 12 396 5.08e-17 84.0
MS.gene045451.t1 AT5G18780 26.037 434 263 14 13 416 1 406 5.27e-17 83.6
MS.gene045451.t1 AT5G18780 26.037 434 263 14 13 416 1 406 5.27e-17 83.6
MS.gene045451.t1 AT2G26030 23.697 422 280 18 23 416 4 411 6.62e-17 83.2
MS.gene045451.t1 AT3G60040 25.112 446 291 15 22 443 229 655 8.21e-17 83.6
MS.gene045451.t1 AT5G56390 26.442 416 246 18 41 429 21 403 9.00e-17 82.8
MS.gene045451.t1 AT3G60040 25.112 446 291 15 22 443 231 657 9.15e-17 83.6
MS.gene045451.t1 AT3G60040 25.112 446 291 15 22 443 231 657 9.62e-17 83.6
MS.gene045451.t1 AT3G60040 25.112 446 291 15 22 443 232 658 9.98e-17 83.6
MS.gene045451.t1 AT3G60040 25.112 446 291 15 22 443 12 438 1.04e-16 83.2
MS.gene045451.t1 AT2G26030 23.866 419 278 17 23 416 4 406 1.11e-16 82.4
MS.gene045451.t1 AT2G26030 23.866 419 278 17 23 416 4 406 1.11e-16 82.4
MS.gene045451.t1 AT2G42720 25.408 429 269 13 23 418 2 412 2.69e-16 81.3
MS.gene045451.t1 AT1G55660 26.107 429 274 15 18 419 48 460 2.98e-16 81.3
MS.gene045451.t1 AT1G55660 29.954 217 142 6 18 226 48 262 5.07e-16 79.7
MS.gene045451.t1 AT3G26922 26.336 262 161 5 15 273 6 238 5.91e-16 78.6
MS.gene045451.t1 AT4G13985 24.419 430 296 11 19 427 15 436 1.20e-15 79.3
MS.gene045451.t1 AT5G38396 24.318 440 278 16 23 422 2 426 1.23e-15 79.3
MS.gene045451.t1 AT3G58930 25.346 434 252 14 23 419 2 400 1.64e-15 79.0
MS.gene045451.t1 AT3G58930 25.346 434 252 14 23 419 2 400 1.64e-15 79.0
MS.gene045451.t1 AT1G78760 23.131 428 292 13 22 431 15 423 2.01e-15 78.6
MS.gene045451.t1 AT5G56820 22.374 438 291 12 23 445 15 418 2.23e-15 78.6
MS.gene045451.t1 AT3G49480 25.393 445 286 13 10 430 1 423 2.70e-15 78.2
MS.gene045451.t1 AT3G26930 24.879 414 268 14 22 416 20 409 3.84e-15 77.8
MS.gene045451.t1 AT5G27750 21.366 454 309 15 23 441 5 445 4.28e-15 77.8
MS.gene045451.t1 AT3G52680 26.724 348 220 11 22 359 20 342 4.58e-15 77.0
MS.gene045451.t1 AT1G52650 24.419 430 278 12 23 419 2 417 4.78e-15 77.4
MS.gene045451.t1 AT3G49030 23.690 439 269 18 22 445 20 407 5.21e-15 77.0
MS.gene045451.t1 AT2G04230 25.223 448 283 15 22 443 12 433 6.74e-15 77.0
MS.gene045451.t1 AT5G02920 30.348 201 123 6 11 207 16 203 1.45e-14 73.9
MS.gene045451.t1 AT5G56370 25.185 405 250 16 23 409 2 371 1.61e-14 75.5
MS.gene045451.t1 AT5G56370 25.185 405 250 16 23 409 2 371 1.61e-14 75.5
MS.gene045451.t1 AT4G27050 26.400 375 219 16 23 361 4 357 1.76e-14 75.9
MS.gene045451.t1 AT4G27050 26.400 375 219 16 23 361 4 357 1.76e-14 75.9
MS.gene045451.t1 AT4G27050 26.400 375 219 16 23 361 4 357 1.76e-14 75.9
MS.gene045451.t1 AT4G27050 26.400 375 219 16 23 361 4 357 1.76e-14 75.9
MS.gene045451.t1 AT4G27050 26.400 375 219 16 23 361 4 357 1.76e-14 75.9
MS.gene045451.t1 AT5G60610 24.038 416 265 15 23 418 2 386 2.34e-14 75.1
MS.gene045451.t1 AT5G60610 24.038 416 265 15 23 418 2 386 2.34e-14 75.1
MS.gene045451.t1 AT5G56690 24.688 401 255 16 25 401 4 381 3.08e-14 74.7
MS.gene045451.t1 AT5G56410 27.619 210 132 4 32 221 12 221 3.56e-14 75.1
MS.gene045451.t1 AT4G00320 26.357 387 230 17 22 369 12 382 3.66e-14 75.1
MS.gene045451.t1 AT3G59150 26.389 432 279 11 23 419 13 440 3.82e-14 74.7
MS.gene045451.t1 AT4G03220 23.173 479 300 18 23 445 24 490 3.85e-14 74.7
MS.gene045451.t1 AT5G15620 27.397 438 276 17 23 434 2 423 5.53e-14 73.9
MS.gene045451.t1 AT4G26340 24.429 438 279 18 23 442 2 405 8.97e-14 73.2
MS.gene045451.t1 AT4G09920 28.302 212 142 5 23 228 2 209 1.05e-13 72.0
MS.gene045451.t1 AT4G09920 28.302 212 142 5 23 228 2 209 1.05e-13 72.0
MS.gene045451.t1 AT4G09920 28.302 212 142 5 23 228 2 209 1.05e-13 72.0
MS.gene045451.t1 AT3G03030 25.868 317 218 8 23 323 2 317 1.50e-13 72.0
MS.gene045451.t1 AT1G13780 26.259 278 171 10 23 277 10 276 1.73e-13 71.6
MS.gene045451.t1 AT1G60400 25.893 336 212 12 17 334 8 324 1.86e-13 72.4
MS.gene045451.t1 AT4G09920 28.302 212 142 5 23 228 2 209 2.20e-13 71.2
MS.gene045451.t1 AT4G09920 28.302 212 142 5 23 228 2 209 2.20e-13 71.2
MS.gene045451.t1 AT2G26860 23.515 421 271 13 23 418 2 396 2.87e-13 71.6
MS.gene045451.t1 AT2G26860 23.515 421 271 13 23 418 2 396 2.87e-13 71.6
MS.gene045451.t1 AT5G44960 21.853 421 264 13 23 418 5 385 3.29e-13 71.6
MS.gene045451.t1 AT1G06630 26.966 267 175 9 22 275 11 270 3.72e-13 70.5
MS.gene045451.t1 AT5G56370 25.501 349 213 13 23 359 2 315 4.26e-13 70.5
MS.gene045451.t1 AT3G44810 26.899 316 211 8 28 330 12 320 6.95e-13 70.9
MS.gene045451.t1 AT3G26922 25.105 239 168 6 40 273 2 234 7.00e-13 69.3
MS.gene045451.t1 AT3G26922 25.105 239 168 6 40 273 2 234 7.00e-13 69.3
MS.gene045451.t1 AT1G13570 29.630 216 132 8 18 224 1 205 7.04e-13 69.3
MS.gene045451.t1 AT5G41630 27.684 354 215 16 17 336 6 352 7.55e-13 70.5
MS.gene045451.t1 AT4G15060 26.829 369 215 15 17 341 18 375 9.65e-13 70.1
MS.gene045451.t1 AT3G62430 27.002 437 276 15 23 434 2 420 1.17e-12 70.1
MS.gene045451.t1 AT5G22610 24.083 436 271 17 21 416 16 431 1.18e-12 70.1
MS.gene045451.t1 AT3G49040 25.379 264 173 10 22 273 16 267 1.55e-12 68.6
MS.gene045451.t1 AT5G02910 27.374 358 217 16 20 360 8 339 1.58e-12 68.9
MS.gene045451.t1 AT1G13570 29.130 230 136 9 18 231 1 219 2.42e-12 68.9
MS.gene045451.t1 AT1G13570 29.130 230 136 9 18 231 1 219 2.42e-12 68.9
MS.gene045451.t1 AT5G02910 27.374 358 217 16 20 360 8 339 2.44e-12 68.6
MS.gene045451.t1 AT5G38390 24.419 430 272 16 23 419 2 411 2.61e-12 68.9
MS.gene045451.t1 AT3G51530 24.719 445 275 20 22 441 29 438 2.90e-12 68.9
MS.gene045451.t1 AT5G02910 27.374 358 217 16 20 360 8 339 3.13e-12 68.9
MS.gene045451.t1 AT3G49020 23.503 451 293 15 13 442 12 431 4.70e-12 68.2
MS.gene045451.t1 AT5G22610 24.178 426 253 16 21 416 16 401 4.80e-12 68.2
MS.gene045451.t1 AT5G56430 25.614 285 183 7 145 418 58 324 4.98e-12 67.8
MS.gene045451.t1 AT3G49150 25.821 457 292 17 22 445 15 457 7.80e-12 67.4
MS.gene045451.t1 AT1G16940 24.873 197 131 5 23 213 11 196 1.32e-11 66.6
MS.gene045451.t1 AT5G44490 23.598 428 294 13 22 428 16 431 1.61e-11 66.6
MS.gene045451.t1 AT5G44490 23.598 428 294 13 22 428 16 431 1.79e-11 66.6
MS.gene045451.t1 AT2G29930 26.948 308 177 15 145 418 8 301 2.41e-11 65.5
MS.gene045451.t1 AT3G26930 23.256 387 254 14 49 416 2 364 2.56e-11 65.9
MS.gene045451.t1 AT1G80470 26.098 387 238 16 23 386 15 376 3.31e-11 65.5
MS.gene045451.t1 AT1G22000 31.285 179 118 2 25 203 31 204 3.56e-11 65.5
MS.gene045451.t1 AT5G22660 25.191 262 187 4 22 277 12 270 6.43e-11 63.9
MS.gene045451.t1 AT5G03100 22.884 319 217 12 19 329 5 302 7.40e-11 63.5
MS.gene045451.t1 AT5G03100 22.884 319 217 12 19 329 5 302 7.40e-11 63.5
MS.gene045451.t1 AT4G15060 27.854 219 150 6 23 234 172 389 7.71e-11 64.7

Find 79 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAATTTCTTCACATTTA+TGG 0.090305 4.2:+29433323 MS.gene045451:CDS
CAACATGCAGTTCGTTATTT+TGG 0.131415 4.2:-29432681 None:intergenic
ACTAAGTTGGATATAGTATT+TGG 0.170742 4.2:+29432295 MS.gene045451:CDS
GAAAATCAAAGACGGGTAAT+TGG 0.233443 4.2:-29432021 None:intergenic
TAGAATTTCTTCACATTTAT+GGG 0.250696 4.2:+29433324 MS.gene045451:CDS
TATCACCCACATTATGTCTT+TGG 0.262830 4.2:-29431880 None:intergenic
ACCTACTATTTCTAGATTCT+AGG 0.280979 4.2:-29432234 None:intergenic
AAACTTCACCAATCTGATTT+CGG 0.294077 4.2:-29433555 None:intergenic
CCTGCATTAACAATAGTTAC+TGG 0.304860 4.2:-29432151 None:intergenic
GTTGATGCAAATATTGATCT+TGG 0.309181 4.2:+29432646 MS.gene045451:CDS
TAGAAAATGTCACGTTCTTA+AGG 0.323129 4.2:+29433582 MS.gene045451:CDS
ATGTGAAGAAATTCTAGTTT+AGG 0.324682 4.2:-29433317 None:intergenic
ATCAATATTTGCATCAACTA+TGG 0.332138 4.2:-29432641 None:intergenic
GCTATCAGATGAAACTATTC+AGG 0.345809 4.2:+29432756 MS.gene045451:CDS
CCGGGATGCCGAGAAACTAT+TGG 0.361036 4.2:-29432266 None:intergenic
ATTCTAGTTTAGGACTCTTT+CGG 0.366674 4.2:-29433307 None:intergenic
TTAGGGATCTTACTTATCCT+TGG 0.372669 4.2:+29433442 MS.gene045451:intron
ACAAGGAAACAATTTATAGT+TGG 0.386110 4.2:-29432607 None:intergenic
CAAGGAAACAATTTATAGTT+GGG 0.388932 4.2:-29432606 None:intergenic
AGGAACCAATTGCAAGCTTT+AGG 0.419691 4.2:+29433665 MS.gene045451:CDS
CGGGATGCCGAGAAACTATT+GGG 0.428862 4.2:-29432265 None:intergenic
TTGATGCAAATATTGATCTT+GGG 0.429706 4.2:+29432647 MS.gene045451:CDS
AAAATCAAAGACGGGTAATT+GGG 0.435838 4.2:-29432020 None:intergenic
CCATGCCTAAAGCTTGCAAT+TGG 0.438162 4.2:-29433670 None:intergenic
TGTGTTACCCAATAGTTTCT+CGG 0.443039 4.2:+29432258 MS.gene045451:CDS
CCAGTAACTATTGTTAATGC+AGG 0.451607 4.2:+29432151 MS.gene045451:CDS
ACCTAGAATCTAGAAATAGT+AGG 0.456966 4.2:+29432233 MS.gene045451:CDS
AGAAAATGTCACGTTCTTAA+GGG 0.467231 4.2:+29433583 MS.gene045451:CDS
GGTGACTTAGAATTTCGCTT+TGG 0.469597 4.2:-29432055 None:intergenic
AATTCCAACATTGAAGAAGT+TGG 0.478445 4.2:+29432492 MS.gene045451:CDS
TTGGTAGTGTCGAGTCTCTC+AGG 0.484028 4.2:+29432734 MS.gene045451:CDS
ACTAGATCTACGAGGCAATC+TGG 0.484619 4.2:-29432076 None:intergenic
TTCTCGTCTCTCTACGGAAG+AGG 0.486845 4.2:+29431952 MS.gene045451:CDS
AAGATAATATCTTCAAGCTA+TGG 0.487718 4.2:-29432351 None:intergenic
ATGTCCAACTTCTTCAATGT+TGG 0.494500 4.2:-29432496 None:intergenic
GGTTGGATTTGTGAAGTAGT+TGG 0.497013 4.2:-29432102 None:intergenic
GGATCTTACTTATCCTTGGA+TGG 0.498856 4.2:+29433446 MS.gene045451:CDS
ATTTAAAGATAAAAGATTCA+CGG 0.506708 4.2:-29432572 None:intergenic
AAGGACAACTCTTGTAAGAC+AGG 0.508600 4.2:-29432430 None:intergenic
TAAACTCCAAAGACATAATG+TGG 0.514913 4.2:+29431874 MS.gene045451:CDS
TATCCAACTTAGTCAATGAC+CGG 0.522921 4.2:-29432285 None:intergenic
CTAGGTTAAGTGTAAGATCA+TGG 0.524663 4.2:-29432216 None:intergenic
TTCCTTGATTCTGTAGCTGA+TGG 0.526783 4.2:+29432319 MS.gene045451:CDS
ATTGAGCTGTTCAGTCGTCT+TGG 0.533363 4.2:+29432715 MS.gene045451:CDS
TACCATCAGCTACAGAATCA+AGG 0.536111 4.2:-29432321 None:intergenic
ATCCCGGTCATTGACTAAGT+TGG 0.539690 4.2:+29432282 MS.gene045451:CDS
CCAATAGTTTCTCGGCATCC+CGG 0.540751 4.2:+29432266 MS.gene045451:CDS
AATATAATGAAGAATTCCCT+CGG 0.546133 4.2:-29431927 None:intergenic
CAATTGCAAGCTTTAGGCAT+GGG 0.547449 4.2:+29433671 MS.gene045451:CDS
AGCCGACTTCTCATTTGTGA+AGG 0.550930 4.2:-29432386 None:intergenic
GGAGATGAACATTTACTGTA+CGG 0.552497 4.2:+29433604 MS.gene045451:CDS
AGATGAAGCCGAAATCAGAT+TGG 0.557556 4.2:+29433547 MS.gene045451:CDS
AGAGAAGATTTGAAACAGCA+AGG 0.559103 4.2:-29433494 None:intergenic
TATTCTTTCTCGTCTCTCTA+CGG 0.559151 4.2:+29431946 MS.gene045451:CDS
CGCGTCAAATTCTTGAACGA+AGG 0.560621 4.2:-29433236 None:intergenic
CTTCTATATTAGCAACAAAG+TGG 0.565241 4.2:+29431984 MS.gene045451:CDS
CTATGGAGGAAGAGTTAACA+AGG 0.568754 4.2:-29432624 None:intergenic
AATTCTCGAAAATCAAAGAC+GGG 0.570247 4.2:-29432028 None:intergenic
TATCCTTGGATGGTGAAGAC+TGG 0.573895 4.2:+29433456 MS.gene045451:CDS
TGTCCAGTCTTCACCATCCA+AGG 0.574526 4.2:-29433459 None:intergenic
CCAATTGCAAGCTTTAGGCA+TGG 0.576197 4.2:+29433670 MS.gene045451:CDS
AGATTGCCTCGTAGATCTAG+TGG 0.576199 4.2:+29432078 MS.gene045451:CDS
TACCTTCACAAATGAGAAGT+CGG 0.580484 4.2:+29432384 MS.gene045451:CDS
TCATTAACTTGCGTCACTCG+TGG 0.584904 4.2:+29433702 MS.gene045451:CDS
GAGATGAACATTTACTGTAC+GGG 0.586511 4.2:+29433605 MS.gene045451:CDS
CAGTAACTATTGTTAATGCA+GGG 0.596957 4.2:+29432152 MS.gene045451:CDS
ATATAATGAAGAATTCCCTC+GGG 0.598954 4.2:-29431926 None:intergenic
AGAATTTCTTCACATTTATG+GGG 0.604749 4.2:+29433325 MS.gene045451:CDS
CGAAGAAGCTGGCTGATGTG+AGG 0.621819 4.2:+29433645 MS.gene045451:CDS
ATGATTAGCGATTTACCCGA+GGG 0.622620 4.2:+29431911 MS.gene045451:CDS
ATGTCTGCTAATACTTCACA+AGG 0.623262 4.2:-29433281 None:intergenic
TAATTCTCGAAAATCAAAGA+CGG 0.624079 4.2:-29432029 None:intergenic
AATATTTGCATCAACTATGG+AGG 0.624435 4.2:-29432638 None:intergenic
ATCCAACTTAGTCAATGACC+GGG 0.638859 4.2:-29432284 None:intergenic
CAACAAAGTGGAGATACTTG+TGG 0.640766 4.2:+29431996 MS.gene045451:CDS
TATGATTAGCGATTTACCCG+AGG 0.648778 4.2:+29431910 MS.gene045451:CDS
AAACTCCAAAGACATAATGT+GGG 0.676914 4.2:+29431875 MS.gene045451:CDS
AGGACAACTCTTGTAAGACA+GGG 0.690229 4.2:-29432429 None:intergenic
GTTGGTCCACTAGATCTACG+AGG 0.818443 4.2:-29432084 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAGTTTAATTAAATG+AGG - chr4.2:29432905-29432924 None:intergenic 10.0%
!! TAAAAAGTTTAATTAAATGA+GGG - chr4.2:29432904-29432923 None:intergenic 10.0%
!! AAAAAGTTTAATTAAATGAG+GGG - chr4.2:29432903-29432922 None:intergenic 15.0%
!! ATGTAATTGATCAAATTTAA+TGG - chr4.2:29433004-29433023 None:intergenic 15.0%
!! ATTTAAAGATAAAAGATTCA+CGG - chr4.2:29432575-29432594 None:intergenic 15.0%
!! AAGAATATGCAAATAATACA+AGG - chr4.2:29433136-29433155 None:intergenic 20.0%
!! GATCAATTACATTTCTTAAT+AGG + chr4.2:29433012-29433031 MS.gene045451:intron 20.0%
!! TAGAATTTCTTCACATTTAT+GGG + chr4.2:29433324-29433343 MS.gene045451:CDS 20.0%
!! TTGCTTATATTTCATTACAA+AGG - chr4.2:29432835-29432854 None:intergenic 20.0%
!! TTTCTATTGTAAATGTTGAT+TGG + chr4.2:29433104-29433123 MS.gene045451:intron 20.0%
!!! CAGACTTGATTTTTTTTTAT+TGG + chr4.2:29432971-29432990 MS.gene045451:intron 20.0%
! AAACAAAAACAAGTCAAGAT+CGG - chr4.2:29433170-29433189 None:intergenic 25.0%
! AAATTATTGTTAGCCGTTAA+AGG - chr4.2:29433387-29433406 None:intergenic 25.0%
! AAGATAATATCTTCAAGCTA+TGG - chr4.2:29432354-29432373 None:intergenic 25.0%
! AATATAATGAAGAATTCCCT+CGG - chr4.2:29431930-29431949 None:intergenic 25.0%
! ACAAGGAAACAATTTATAGT+TGG - chr4.2:29432610-29432629 None:intergenic 25.0%
! AGAATTTCTTCACATTTATG+GGG + chr4.2:29433325-29433344 MS.gene045451:CDS 25.0%
! ATCAATATTTGCATCAACTA+TGG - chr4.2:29432644-29432663 None:intergenic 25.0%
! ATGACCCAATTTATTAATCA+TGG + chr4.2:29432932-29432951 MS.gene045451:intron 25.0%
! ATTGTTAAATAAGATCGAAG+TGG - chr4.2:29432865-29432884 None:intergenic 25.0%
! CAAGGAAACAATTTATAGTT+GGG - chr4.2:29432609-29432628 None:intergenic 25.0%
! CTAGAATTTCTTCACATTTA+TGG + chr4.2:29433323-29433342 MS.gene045451:CDS 25.0%
! TAATTCTCGAAAATCAAAGA+CGG - chr4.2:29432032-29432051 None:intergenic 25.0%
! TTGATGCAAATATTGATCTT+GGG + chr4.2:29432647-29432666 MS.gene045451:CDS 25.0%
!! ACTAAGTTGGATATAGTATT+TGG + chr4.2:29432295-29432314 MS.gene045451:CDS 25.0%
!!! ATGTGAAGAAATTCTAGTTT+AGG - chr4.2:29433320-29433339 None:intergenic 25.0%
!!! CAATGAAGAGCTTTTTTATA+CGG - chr4.2:29432126-29432145 None:intergenic 25.0%
!!! TGTGTATTGATTCTTGTTTA+GGG + chr4.2:29433425-29433444 MS.gene045451:intron 25.0%
!!! TTGTGTATTGATTCTTGTTT+AGG + chr4.2:29433424-29433443 MS.gene045451:intron 25.0%
AAAATCAAAGACGGGTAATT+GGG - chr4.2:29432023-29432042 None:intergenic 30.0%
AAACTCCAAAGACATAATGT+GGG + chr4.2:29431875-29431894 MS.gene045451:CDS 30.0%
AAACTTCACCAATCTGATTT+CGG - chr4.2:29433558-29433577 None:intergenic 30.0%
AATATTTGCATCAACTATGG+AGG - chr4.2:29432641-29432660 None:intergenic 30.0%
AATTCCAACATTGAAGAAGT+TGG + chr4.2:29432492-29432511 MS.gene045451:CDS 30.0%
AATTCTCGAAAATCAAAGAC+GGG - chr4.2:29432031-29432050 None:intergenic 30.0%
ACCCAATTTATTAATCATGG+AGG + chr4.2:29432935-29432954 MS.gene045451:intron 30.0%
ACCCTCCATGATTAATAAAT+TGG - chr4.2:29432940-29432959 None:intergenic 30.0%
ACCTAGAATCTAGAAATAGT+AGG + chr4.2:29432233-29432252 MS.gene045451:CDS 30.0%
AGAAAATGTCACGTTCTTAA+GGG + chr4.2:29433583-29433602 MS.gene045451:CDS 30.0%
ATATAATGAAGAATTCCCTC+GGG - chr4.2:29431929-29431948 None:intergenic 30.0%
ATCAAAAAAATCGAAGAAGC+TGG + chr4.2:29433634-29433653 MS.gene045451:CDS 30.0%
ATCACACTTCGTAATACTTA+AGG - chr4.2:29433057-29433076 None:intergenic 30.0%
CAGTAACTATTGTTAATGCA+GGG + chr4.2:29432152-29432171 MS.gene045451:CDS 30.0%
CCCAATTTATTAATCATGGA+GGG + chr4.2:29432936-29432955 MS.gene045451:intron 30.0%
CCCTCCATGATTAATAAATT+GGG - chr4.2:29432939-29432958 None:intergenic 30.0%
CTTCTATATTAGCAACAAAG+TGG + chr4.2:29431984-29432003 MS.gene045451:CDS 30.0%
GTTGATGCAAATATTGATCT+TGG + chr4.2:29432646-29432665 MS.gene045451:CDS 30.0%
TAAACTCCAAAGACATAATG+TGG + chr4.2:29431874-29431893 MS.gene045451:CDS 30.0%
TAGAAAATGTCACGTTCTTA+AGG + chr4.2:29433582-29433601 MS.gene045451:CDS 30.0%
TCACACTTCGTAATACTTAA+GGG - chr4.2:29433056-29433075 None:intergenic 30.0%
! TGTGATATTTCAGATTTTCG+TGG + chr4.2:29433524-29433543 MS.gene045451:CDS 30.0%
!! ACCTACTATTTCTAGATTCT+AGG - chr4.2:29432237-29432256 None:intergenic 30.0%
!! ATTCTAGTTTAGGACTCTTT+CGG - chr4.2:29433310-29433329 None:intergenic 30.0%
ATGTCCAACTTCTTCAATGT+TGG - chr4.2:29432499-29432518 None:intergenic 35.0%
ATGTCTGCTAATACTTCACA+AGG - chr4.2:29433284-29433303 None:intergenic 35.0%
CACACTTCGTAATACTTAAG+GGG - chr4.2:29433055-29433074 None:intergenic 35.0%
CATAGTTAAGACACTAGCAA+GGG - chr4.2:29433193-29433212 None:intergenic 35.0%
CCAGTAACTATTGTTAATGC+AGG + chr4.2:29432151-29432170 MS.gene045451:CDS 35.0%
CCTGCATTAACAATAGTTAC+TGG - chr4.2:29432154-29432173 None:intergenic 35.0%
CTAGGTTAAGTGTAAGATCA+TGG - chr4.2:29432219-29432238 None:intergenic 35.0%
GAAAATCAAAGACGGGTAAT+TGG - chr4.2:29432024-29432043 None:intergenic 35.0%
GAGATGAACATTTACTGTAC+GGG + chr4.2:29433605-29433624 MS.gene045451:CDS 35.0%
GCTATCAGATGAAACTATTC+AGG + chr4.2:29432756-29432775 MS.gene045451:CDS 35.0%
GGAGATGAACATTTACTGTA+CGG + chr4.2:29433604-29433623 MS.gene045451:CDS 35.0%
GTCCTTCGAAAAATGTTACT+GGG + chr4.2:29432447-29432466 MS.gene045451:CDS 35.0%
TACCTTCACAAATGAGAAGT+CGG + chr4.2:29432384-29432403 MS.gene045451:CDS 35.0%
TATCACCCACATTATGTCTT+TGG - chr4.2:29431883-29431902 None:intergenic 35.0%
TATCCAACTTAGTCAATGAC+CGG - chr4.2:29432288-29432307 None:intergenic 35.0%
TATTCTTTCTCGTCTCTCTA+CGG + chr4.2:29431946-29431965 MS.gene045451:CDS 35.0%
TGTCCTTCGAAAAATGTTAC+TGG + chr4.2:29432446-29432465 MS.gene045451:CDS 35.0%
TGTGTTACCCAATAGTTTCT+CGG + chr4.2:29432258-29432277 MS.gene045451:CDS 35.0%
TTAGGGATCTTACTTATCCT+TGG + chr4.2:29433442-29433461 MS.gene045451:intron 35.0%
TTATTGTTAGCCGTTAAAGG+TGG - chr4.2:29433384-29433403 None:intergenic 35.0%
! AGAGAAGATTTGAAACAGCA+AGG - chr4.2:29433497-29433516 None:intergenic 35.0%
! ATCTTGCTCCAGATTTTCTT+CGG + chr4.2:29433358-29433377 MS.gene045451:intron 35.0%
! CAACATGCAGTTCGTTATTT+TGG - chr4.2:29432684-29432703 None:intergenic 35.0%
!!! GAAGAGCTTTTTTATACGGT+TGG - chr4.2:29432122-29432141 None:intergenic 35.0%
AAGGACAACTCTTGTAAGAC+AGG - chr4.2:29432433-29432452 None:intergenic 40.0%
AGATGAAGCCGAAATCAGAT+TGG + chr4.2:29433547-29433566 MS.gene045451:CDS 40.0%
AGGAACCAATTGCAAGCTTT+AGG + chr4.2:29433665-29433684 MS.gene045451:CDS 40.0%
AGGACAACTCTTGTAAGACA+GGG - chr4.2:29432432-29432451 None:intergenic 40.0%
ATCCAACTTAGTCAATGACC+GGG - chr4.2:29432287-29432306 None:intergenic 40.0%
ATGATTAGCGATTTACCCGA+GGG + chr4.2:29431911-29431930 MS.gene045451:CDS 40.0%
CAACAAAGTGGAGATACTTG+TGG + chr4.2:29431996-29432015 MS.gene045451:CDS 40.0%
CTATGGAGGAAGAGTTAACA+AGG - chr4.2:29432627-29432646 None:intergenic 40.0%
GCATAGTTAAGACACTAGCA+AGG - chr4.2:29433194-29433213 None:intergenic 40.0%
GGATCTTACTTATCCTTGGA+TGG + chr4.2:29433446-29433465 MS.gene045451:CDS 40.0%
GGTGACTTAGAATTTCGCTT+TGG - chr4.2:29432058-29432077 None:intergenic 40.0%
GGTTGGATTTGTGAAGTAGT+TGG - chr4.2:29432105-29432124 None:intergenic 40.0%
TACCATCAGCTACAGAATCA+AGG - chr4.2:29432324-29432343 None:intergenic 40.0%
TATGATTAGCGATTTACCCG+AGG + chr4.2:29431910-29431929 MS.gene045451:CDS 40.0%
TTCCTTGATTCTGTAGCTGA+TGG + chr4.2:29432319-29432338 MS.gene045451:CDS 40.0%
! TTTTCTTCGGCCACCTTTAA+CGG + chr4.2:29433371-29433390 MS.gene045451:intron 40.0%
!! CAATTGCAAGCTTTAGGCAT+GGG + chr4.2:29433671-29433690 MS.gene045451:CDS 40.0%
!! CTCCCAGTAACATTTTTCGA+AGG - chr4.2:29432452-29432471 None:intergenic 40.0%
!!! CGGCTCAAAGACTTTTTTCT+GGG + chr4.2:29432404-29432423 MS.gene045451:CDS 40.0%
!!! TCGGCTCAAAGACTTTTTTC+TGG + chr4.2:29432403-29432422 MS.gene045451:CDS 40.0%
AAAGGTGGCCGAAGAAAATC+TGG - chr4.2:29433369-29433388 None:intergenic 45.0%
ACTAGATCTACGAGGCAATC+TGG - chr4.2:29432079-29432098 None:intergenic 45.0%
AGATTGCCTCGTAGATCTAG+TGG + chr4.2:29432078-29432097 MS.gene045451:CDS 45.0%
ATTGAGCTGTTCAGTCGTCT+TGG + chr4.2:29432715-29432734 MS.gene045451:CDS 45.0%
CCATGCCTAAAGCTTGCAAT+TGG - chr4.2:29433673-29433692 None:intergenic 45.0%
CGCGTCAAATTCTTGAACGA+AGG - chr4.2:29433239-29433258 None:intergenic 45.0%
TATCCTTGGATGGTGAAGAC+TGG + chr4.2:29433456-29433475 MS.gene045451:CDS 45.0%
! AGCCGACTTCTCATTTGTGA+AGG - chr4.2:29432389-29432408 None:intergenic 45.0%
! ATCCCGGTCATTGACTAAGT+TGG + chr4.2:29432282-29432301 MS.gene045451:CDS 45.0%
!! CCAATTGCAAGCTTTAGGCA+TGG + chr4.2:29433670-29433689 MS.gene045451:CDS 45.0%
!! TCATTAACTTGCGTCACTCG+TGG + chr4.2:29433702-29433721 MS.gene045451:CDS 45.0%
CCAATAGTTTCTCGGCATCC+CGG + chr4.2:29432266-29432285 MS.gene045451:CDS 50.0%
CGGGATGCCGAGAAACTATT+GGG - chr4.2:29432268-29432287 None:intergenic 50.0%
GTTGGTCCACTAGATCTACG+AGG - chr4.2:29432087-29432106 None:intergenic 50.0%
TGTCCAGTCTTCACCATCCA+AGG - chr4.2:29433462-29433481 None:intergenic 50.0%
TTCTCGTCTCTCTACGGAAG+AGG + chr4.2:29431952-29431971 MS.gene045451:CDS 50.0%
!! TTGGTAGTGTCGAGTCTCTC+AGG + chr4.2:29432734-29432753 MS.gene045451:CDS 50.0%
CCGGGATGCCGAGAAACTAT+TGG - chr4.2:29432269-29432288 None:intergenic 55.0%
CGAAGAAGCTGGCTGATGTG+AGG + chr4.2:29433645-29433664 MS.gene045451:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 29431842 29433730 29431842 ID=MS.gene045451
chr4.2 mRNA 29431842 29433730 29431842 ID=MS.gene045451.t1;Parent=MS.gene045451
chr4.2 exon 29431842 29432777 29431842 ID=MS.gene045451.t1.exon1;Parent=MS.gene045451.t1
chr4.2 CDS 29431842 29432777 29431842 ID=cds.MS.gene045451.t1;Parent=MS.gene045451.t1
chr4.2 exon 29433200 29433346 29433200 ID=MS.gene045451.t1.exon2;Parent=MS.gene045451.t1
chr4.2 CDS 29433200 29433346 29433200 ID=cds.MS.gene045451.t1;Parent=MS.gene045451.t1
chr4.2 exon 29433446 29433730 29433446 ID=MS.gene045451.t1.exon3;Parent=MS.gene045451.t1
chr4.2 CDS 29433446 29433730 29433446 ID=cds.MS.gene045451.t1;Parent=MS.gene045451.t1
Gene Sequence

>MS.gene045451

ATGGCTTCTACAATCTCATCATCAAATTTACATAAACTCCAAAGACATAATGTGGGTGATATGAAAGATATGATTAGCGATTTACCCGAGGGAATTCTTCATTATATTCTTTCTCGTCTCTCTACGGAAGAGGCTGTAAGAACTTCTATATTAGCAACAAAGTGGAGATACTTGTGGACCCAATTACCCGTCTTTGATTTTCGAGAATTATCTCCAAAGCGAAATTCTAAGTCACCAGATTGCCTCGTAGATCTAGTGGACCAACTACTTCACAAATCCAACCGTATAAAAAAGCTCTTCATTGAATTACCAGTAACTATTGTTAATGCAGGGAAAGTTAGTTCTATGTTAACTTCTGCATTGATGCATGATGTCCATGATCTTACACTTAACCTAGAATCTAGAAATAGTAGGTTTGTGTTACCCAATAGTTTCTCGGCATCCCGGTCATTGACTAAGTTGGATATAGTATTTGGCTTCCTTGATTCTGTAGCTGATGGTATCTGTTTCCATAGCTTGAAGATATTATCTTTTGCACATCTTACCTTCACAAATGAGAAGTCGGCTCAAAGACTTTTTTCTGGGTGCCCTGTCTTACAAGAGTTGTCCTTCGAAAAATGTTACTGGGAGAACATAAACATTAGTGTTGCAATTCCAACATTGAAGAAGTTGGACATCTTTTTCAGATCTTCTAGTCTAGATCGTAACAGTTGTATGTTCGAAATTGATGCCGTGAATCTTTTATCTTTAAATTACAAAAGTAACCCAACTATAAATTGTTTCCTTGTTAACTCTTCCTCCATAGTTGATGCAAATATTGATCTTGGGTTTTTCTGTGTCCAAAATAACGAACTGCATGTTGCTGTATTTGCAATTGAGCTGTTCAGTCGTCTTGGTAGTGTCGAGTCTCTCAGGCTATCAGATGAAACTATTCAGGTATGTTTGAATGTTTACTTATTGTCTTCATTAATATAATATAATTATTGTACTCCTTTGTAATGAAATATAAGCAAATCTTAACCACTTCGATCTTATTTAACAATAGTATCTCTATATTACCCCTCATTTAATTAAACTTTTTATATTTTCAATGACCCAATTTATTAATCATGGAGGGTAGTTTAGACAACAGACTTGATTTTTTTTTATTGGATTGCATCCATTAAATTTGATCAATTACATTTCTTAATAGGTTTAATAACAGTTTTGACCCCTTAAGTATTACGAAGTGTGATCAATTTATGTTTCTAATTTATAGATAATTTCTATTGTAAATGTTGATTGGTCATGTCCTTGTATTATTTGCATATTCTTTCAATATCACACCGATCTTGACTTGTTTTTGTTTCCCTTGCTAGTGTCTTAACTATGCAAAATCTGCTCTTCATCTTTTACCTTCGTTCAAGAATTTGACGCGTCTTGAAGTGCATTTCGATGATCCTTGTGAAGTATTAGCAGACATTCTCCGAAAGAGTCCTAAACTAGAATTTCTTCACATTTATGGGGTACATCTTGTATCTTGCTCCAGATTTTCTTCGGCCACCTTTAACGGCTAACAATAATTTTATCTCAGTCTGTTGACTTGTGTATTGATTCTTGTTTAGGGATCTTACTTATCCTTGGATGGTGAAGACTGGACATCAGATTCATTGCCTTGCTGTTTCAAATCTTCTCTCAAATCATGTGATATTTCAGATTTTCGTGGAGATGAAGCCGAAATCAGATTGGTGAAGTTTTTGTTAGAAAATGTCACGTTCTTAAGGGAGATGAACATTTACTGTACGGGATATCTATCAAAAAAATCGAAGAAGCTGGCTGATGTGAGGAACCAATTGCAAGCTTTAGGCATGGGAAGTTGTGTCATTAACTTGCGTCACTCGTGGTTTTGA

Protein sequence

>MS.gene045451.t1

MASTISSSNLHKLQRHNVGDMKDMISDLPEGILHYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRELSPKRNSKSPDCLVDLVDQLLHKSNRIKKLFIELPVTIVNAGKVSSMLTSALMHDVHDLTLNLESRNSRFVLPNSFSASRSLTKLDIVFGFLDSVADGICFHSLKILSFAHLTFTNEKSAQRLFSGCPVLQELSFEKCYWENINISVAIPTLKKLDIFFRSSSLDRNSCMFEIDAVNLLSLNYKSNPTINCFLVNSSSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVESLRLSDETIQCLNYAKSALHLLPSFKNLTRLEVHFDDPCEVLADILRKSPKLEFLHIYGGSYLSLDGEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTFLREMNIYCTGYLSKKSKKLADVRNQLQALGMGSCVINLRHSWF