AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene006723


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006723.t1 MTR_4g080590 94.737 456 24 0 1 456 1 456 0.0 877
MS.gene006723.t1 MTR_4g080590 94.751 362 19 0 1 362 1 362 0.0 696
MS.gene006723.t1 MTR_3g048290 47.660 470 231 7 1 456 1 469 4.44e-124 369
MS.gene006723.t1 MTR_4g080787 46.008 476 229 8 1 456 1 468 8.67e-121 362
MS.gene006723.t1 MTR_4g130200 47.124 452 171 7 1 448 1 388 1.42e-114 342
MS.gene006723.t1 MTR_4g080773 44.350 469 236 8 1 449 1 464 5.04e-111 337
MS.gene006723.t1 MTR_4g080773 44.350 469 236 8 1 449 1 464 9.39e-111 336
MS.gene006723.t1 MTR_5g039950 44.444 459 209 6 1 452 1 420 8.00e-106 321
MS.gene006723.t1 MTR_7g023310 44.516 465 233 12 1 450 1 455 7.02e-102 312
MS.gene006723.t1 MTR_5g039970 54.799 323 136 4 5 318 1 322 4.43e-99 300
MS.gene006723.t1 MTR_7g023330 39.956 458 200 10 6 452 3 396 6.19e-87 271
MS.gene006723.t1 MTR_7g039630 43.784 370 166 6 1 360 1 338 1.11e-76 243
MS.gene006723.t1 MTR_4g080807 41.899 358 169 5 90 443 1 323 3.24e-69 226
MS.gene006723.t1 MTR_2g094750 44.415 376 165 15 21 358 88 457 7.17e-68 224
MS.gene006723.t1 MTR_4g081030 37.037 378 211 9 8 371 2 366 3.58e-53 183
MS.gene006723.t1 MTR_5g005690 27.983 461 270 12 9 419 3 451 8.82e-33 130
MS.gene006723.t1 MTR_2g072530 26.316 437 306 11 15 442 5 434 3.89e-27 113
MS.gene006723.t1 MTR_5g080710 27.896 423 280 13 6 420 16 421 8.63e-27 112
MS.gene006723.t1 MTR_4g045900 23.918 485 297 16 23 443 26 502 2.46e-25 108
MS.gene006723.t1 MTR_3g107160 25.995 427 216 14 20 421 7 358 3.34e-24 104
MS.gene006723.t1 MTR_8g062270 28.635 447 271 17 20 435 13 442 5.32e-24 104
MS.gene006723.t1 MTR_8g467800 28.806 427 257 16 20 419 17 423 5.34e-24 104
MS.gene006723.t1 MTR_7g094030 28.230 418 272 14 22 421 27 434 1.32e-22 100
MS.gene006723.t1 MTR_2g007450 26.077 441 220 16 23 420 16 393 1.76e-22 99.8
MS.gene006723.t1 MTR_5g084070 26.747 415 273 12 14 420 4 395 2.04e-22 99.8
MS.gene006723.t1 MTR_1g082260 41.667 144 81 1 73 213 23 166 2.79e-22 94.4
MS.gene006723.t1 MTR_2g005990 25.727 447 235 16 18 433 1 381 3.76e-21 95.5
MS.gene006723.t1 MTR_4g080813 59.420 69 28 0 5 73 1 69 1.16e-20 87.0
MS.gene006723.t1 MTR_7g098510 24.612 451 242 17 7 439 2 372 1.24e-20 94.0
MS.gene006723.t1 MTR_7g056433 23.348 454 256 13 14 447 3 384 3.40e-20 92.4
MS.gene006723.t1 MTR_4g032845 25.167 449 284 16 21 439 1 427 6.69e-20 92.0
MS.gene006723.t1 MTR_2g082850 26.857 350 234 14 22 356 21 363 7.02e-20 91.3
MS.gene006723.t1 MTR_2g007500 28.792 389 200 19 19 396 10 332 1.67e-19 89.7
MS.gene006723.t1 MTR_6g022500 25.476 420 235 14 17 424 95 448 1.80e-18 88.2
MS.gene006723.t1 MTR_7g075820 25.463 432 228 18 18 420 1 367 3.82e-18 86.3
MS.gene006723.t1 MTR_2g072720 24.051 474 310 16 1 445 16 468 4.40e-18 87.0
MS.gene006723.t1 MTR_5g073420 23.558 416 237 12 23 429 11 354 1.00e-17 85.1
MS.gene006723.t1 MTR_2g082800 26.555 418 254 19 11 406 14 400 1.22e-17 85.1
MS.gene006723.t1 MTR_3g107120 24.762 420 229 13 23 419 9 364 1.25e-17 85.1
MS.gene006723.t1 MTR_3g107100 24.879 414 232 13 20 419 8 356 3.85e-17 83.6
MS.gene006723.t1 MTR_6g022360 26.747 415 216 14 20 422 40 378 4.34e-17 83.2
MS.gene006723.t1 MTR_1g090883 27.733 375 233 11 5 360 1 356 4.36e-17 83.2
MS.gene006723.t1 MTR_4g032730 23.864 440 280 15 20 419 12 436 7.65e-17 83.2
MS.gene006723.t1 MTR_7g098570 25.319 470 252 19 7 454 3 395 8.62e-17 82.8
MS.gene006723.t1 MTR_7g088260 25.641 429 222 16 22 430 90 441 9.40e-17 82.8
MS.gene006723.t1 MTR_8g468840 26.887 424 270 17 21 419 12 420 1.24e-16 82.4
MS.gene006723.t1 MTR_8g058965 27.126 435 265 16 19 420 9 424 1.68e-16 82.0
MS.gene006723.t1 MTR_3g087260 24.336 452 264 15 15 419 4 424 2.09e-16 81.6
MS.gene006723.t1 MTR_5g083890 24.503 453 240 15 18 433 1 388 2.32e-16 81.6
MS.gene006723.t1 MTR_7g007080 26.841 421 217 16 22 420 3 354 4.31e-16 80.1
MS.gene006723.t1 MTR_3g108560 23.294 425 242 13 18 430 15 367 7.14e-16 79.3
MS.gene006723.t1 MTR_7g098480 25.118 422 240 16 7 419 2 356 8.50e-16 79.7
MS.gene006723.t1 MTR_3g448340 27.455 448 257 22 18 419 1 426 2.49e-15 78.2
MS.gene006723.t1 MTR_2g082880 24.113 423 276 14 19 421 6 403 3.35e-15 77.8
MS.gene006723.t1 MTR_8g467800 29.180 305 192 12 20 312 17 309 5.17e-15 76.6
MS.gene006723.t1 MTR_1g038760 27.273 363 228 14 11 356 2 345 5.77e-15 76.6
MS.gene006723.t1 MTR_1g038760 27.273 363 228 14 11 356 2 345 7.82e-15 75.9
MS.gene006723.t1 MTR_8g445780 26.952 397 263 13 19 404 9 389 1.47e-14 75.5
MS.gene006723.t1 MTR_6g018660 24.403 377 226 13 12 353 9 361 1.95e-14 75.1
MS.gene006723.t1 MTR_8g066650 27.744 328 220 9 16 335 73 391 2.10e-14 75.5
MS.gene006723.t1 MTR_2g072730 24.208 442 289 14 1 418 1 420 3.70e-14 74.7
MS.gene006723.t1 MTR_5g038430 29.412 221 144 8 14 226 87 303 7.23e-14 73.9
MS.gene006723.t1 MTR_3g023470 27.247 356 235 11 14 357 6 349 1.52e-13 72.4
MS.gene006723.t1 MTR_1g038710 25.176 425 276 17 23 420 19 428 2.28e-13 72.4
MS.gene006723.t1 MTR_8g469020 25.216 464 284 17 23 447 7 446 2.68e-13 72.0
MS.gene006723.t1 MTR_7g055943 23.624 436 256 14 6 427 24 396 3.73e-13 71.6
MS.gene006723.t1 MTR_3g110010 30.939 181 122 3 22 202 12 189 3.76e-13 72.0
MS.gene006723.t1 MTR_0049s0110 25.708 424 253 18 23 424 8 391 5.03e-13 70.9
MS.gene006723.t1 MTR_3g109982 30.939 181 122 3 22 202 12 189 5.84e-13 71.6
MS.gene006723.t1 MTR_6g088700 27.964 329 213 12 22 338 13 329 1.29e-12 69.7
MS.gene006723.t1 MTR_2g082780 28.079 203 135 8 26 221 15 213 1.46e-12 67.0
MS.gene006723.t1 MTR_3g108150 30.270 185 117 6 22 202 12 188 2.02e-12 68.9
MS.gene006723.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 2.37e-12 67.8
MS.gene006723.t1 MTR_6g025160 25.391 256 171 7 13 259 91 335 3.00e-12 68.2
MS.gene006723.t1 MTR_3g036250 28.342 187 123 5 23 202 5 187 3.12e-12 68.2
MS.gene006723.t1 MTR_8g468810 26.350 463 284 23 22 452 24 461 3.30e-12 68.6
MS.gene006723.t1 MTR_2g091145 25.059 427 261 15 23 424 21 413 3.72e-12 68.6
MS.gene006723.t1 MTR_5g092960 26.077 441 261 16 20 419 16 432 4.53e-12 68.2
MS.gene006723.t1 MTR_8g014160 25.238 420 235 20 18 419 35 393 5.08e-12 67.8
MS.gene006723.t1 MTR_1g011430 29.004 231 142 9 23 239 7 229 5.09e-12 67.4
MS.gene006723.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 7.32e-12 67.0
MS.gene006723.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 8.47e-12 66.6
MS.gene006723.t1 MTR_5g087940 24.556 338 204 12 19 336 22 328 8.97e-12 67.0
MS.gene006723.t1 MTR_2g047848 25.293 427 247 17 23 417 7 393 1.07e-11 67.0
MS.gene006723.t1 MTR_7g084080 28.916 249 161 9 19 257 13 255 1.94e-11 65.1
MS.gene006723.t1 MTR_4g056030 25.057 435 286 19 20 431 6 423 2.02e-11 66.2
MS.gene006723.t1 MTR_3g019220 33.333 138 83 3 22 156 25 156 2.20e-11 66.6
MS.gene006723.t1 MTR_7g026500 35.043 117 70 4 324 435 265 380 2.40e-11 65.9
MS.gene006723.t1 MTR_3g036320 27.410 332 208 11 22 335 19 335 2.99e-11 65.1
MS.gene006723.t1 MTR_1g021825 30.493 223 118 8 23 226 17 221 3.57e-11 65.5
MS.gene006723.t1 MTR_3g023330 26.974 304 203 9 22 314 14 309 3.73e-11 64.7
MS.gene006723.t1 MTR_1g021825 30.493 223 118 8 23 226 88 292 3.90e-11 65.5
MS.gene006723.t1 MTR_3g019200 24.038 312 215 9 17 317 2 302 4.39e-11 64.7
MS.gene006723.t1 MTR_5g054920 31.138 167 105 7 276 434 28 192 4.97e-11 62.4
MS.gene006723.t1 MTR_2g100590 26.570 207 137 7 14 207 33 237 5.04e-11 64.7
MS.gene006723.t1 MTR_3g108560 24.615 325 169 11 18 338 15 267 5.43e-11 63.9
MS.gene006723.t1 MTR_2g100590 26.570 207 137 7 14 207 33 237 6.28e-11 65.1
MS.gene006723.t1 MTR_8g465650 29.268 205 118 7 23 208 12 208 6.51e-11 64.3
MS.gene006723.t1 MTR_8g018340 24.719 356 230 15 18 341 1 350 6.54e-11 64.7
MS.gene006723.t1 MTR_2g100590 26.570 207 137 7 14 207 33 237 6.57e-11 64.3
MS.gene006723.t1 MTR_1g021820 29.515 227 135 9 23 232 28 246 6.60e-11 64.3
MS.gene006723.t1 MTR_1g025870 23.606 538 294 19 6 449 4 518 7.81e-11 64.3
MS.gene006723.t1 MTR_5g044860 25.074 339 228 11 14 338 21 347 9.87e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006723.t1 AT4G14096 28.571 462 287 16 18 451 3 449 2.82e-33 131
MS.gene006723.t1 AT4G14096 28.571 462 287 16 18 451 3 449 2.82e-33 131
MS.gene006723.t1 AT3G58880 29.425 435 255 17 21 420 1 418 8.84e-31 124
MS.gene006723.t1 AT3G59210 29.892 465 265 17 22 444 6 451 9.46e-31 124
MS.gene006723.t1 AT3G59210 29.892 465 265 17 22 444 6 451 9.46e-31 124
MS.gene006723.t1 AT3G59210 29.892 465 265 17 22 444 6 451 9.46e-31 124
MS.gene006723.t1 AT3G59210 29.892 465 265 17 22 444 6 451 9.46e-31 124
MS.gene006723.t1 AT3G59210 29.892 465 265 17 22 444 6 451 9.46e-31 124
MS.gene006723.t1 AT1G78840 29.833 419 254 15 22 419 4 403 7.58e-30 121
MS.gene006723.t1 AT1G78840 29.833 419 254 15 22 419 4 403 7.58e-30 121
MS.gene006723.t1 AT4G14103 29.640 361 231 11 18 362 3 356 1.57e-29 119
MS.gene006723.t1 AT4G14103 29.640 361 231 11 18 362 3 356 1.57e-29 119
MS.gene006723.t1 AT4G14103 27.533 454 277 16 18 451 3 424 2.26e-29 119
MS.gene006723.t1 AT5G53840 28.169 426 287 12 22 442 17 428 1.46e-28 117
MS.gene006723.t1 AT3G58900 29.571 443 247 18 23 420 2 424 2.98e-28 117
MS.gene006723.t1 AT3G58860 28.502 414 267 13 23 419 7 408 8.08e-28 115
MS.gene006723.t1 AT5G44950 26.241 423 267 13 22 419 3 405 2.54e-26 110
MS.gene006723.t1 AT3G59240 26.940 464 291 16 22 451 7 456 4.12e-26 111
MS.gene006723.t1 AT4G13965 26.241 423 275 15 23 434 10 406 9.22e-26 109
MS.gene006723.t1 AT3G03030 27.294 436 278 14 23 424 2 432 9.64e-26 109
MS.gene006723.t1 AT1G32375 26.829 410 266 11 23 419 2 390 1.23e-25 108
MS.gene006723.t1 AT1G32375 26.829 410 266 11 23 419 2 390 1.23e-25 108
MS.gene006723.t1 AT1G51370 28.162 419 268 16 22 430 18 413 1.38e-25 108
MS.gene006723.t1 AT1G66290 25.653 421 289 13 19 429 25 431 9.11e-25 106
MS.gene006723.t1 AT1G66300 25.113 442 303 14 23 451 29 455 2.50e-24 105
MS.gene006723.t1 AT4G22280 29.216 421 262 14 23 433 2 396 2.74e-24 104
MS.gene006723.t1 AT3G59170 29.132 484 266 20 22 451 6 466 3.34e-24 105
MS.gene006723.t1 AT5G38590 26.577 444 272 16 23 447 2 410 3.70e-24 104
MS.gene006723.t1 AT3G59200 26.395 466 274 17 22 435 6 454 7.86e-24 104
MS.gene006723.t1 AT1G58310 29.630 378 223 11 22 362 7 378 8.66e-24 104
MS.gene006723.t1 AT2G42730 27.483 433 265 16 20 419 2 418 9.48e-24 103
MS.gene006723.t1 AT5G22670 27.470 415 270 13 22 419 10 410 1.24e-23 103
MS.gene006723.t1 AT3G59230 28.632 468 271 19 22 442 11 462 1.42e-23 103
MS.gene006723.t1 AT4G22280 31.609 348 209 11 23 360 2 330 1.63e-23 101
MS.gene006723.t1 AT3G50710 26.813 455 269 19 23 447 2 422 3.48e-23 101
MS.gene006723.t1 AT1G13780 25.107 466 293 19 23 452 10 455 4.54e-23 101
MS.gene006723.t1 AT5G56420 25.285 439 297 13 18 447 1 417 6.38e-23 100
MS.gene006723.t1 AT5G56420 25.285 439 297 13 18 447 1 417 6.38e-23 100
MS.gene006723.t1 AT5G56420 25.285 439 297 13 18 447 1 417 6.38e-23 100
MS.gene006723.t1 AT1G06630 29.859 355 219 14 22 360 11 351 7.66e-23 99.8
MS.gene006723.t1 AT1G06630 29.859 355 219 14 22 360 11 351 7.66e-23 99.8
MS.gene006723.t1 AT5G22720 28.140 430 254 16 22 417 22 430 8.27e-23 101
MS.gene006723.t1 AT1G55030 25.248 404 264 12 23 415 19 395 8.89e-23 100
MS.gene006723.t1 AT1G55030 25.248 404 264 12 23 415 9 385 1.06e-22 100
MS.gene006723.t1 AT1G06630 29.859 355 219 14 22 360 11 351 1.65e-22 99.4
MS.gene006723.t1 AT1G06630 29.859 355 219 14 22 360 11 351 1.65e-22 99.4
MS.gene006723.t1 AT1G06630 29.859 355 219 14 22 360 11 351 1.65e-22 99.4
MS.gene006723.t1 AT1G06630 29.859 355 219 14 22 360 11 351 1.65e-22 99.4
MS.gene006723.t1 AT5G53635 27.644 416 268 11 24 419 1 403 1.91e-22 99.8
MS.gene006723.t1 AT1G16930 25.059 423 277 13 23 419 15 423 2.32e-22 99.8
MS.gene006723.t1 AT1G16930 25.059 423 277 13 23 419 15 423 2.32e-22 99.8
MS.gene006723.t1 AT1G16930 25.059 423 277 13 23 419 15 423 2.32e-22 99.8
MS.gene006723.t1 AT1G06630 29.859 355 219 14 22 360 20 360 2.39e-22 99.4
MS.gene006723.t1 AT3G59200 26.902 368 226 12 22 358 6 361 3.43e-22 98.2
MS.gene006723.t1 AT4G10400 26.196 439 280 15 23 450 2 407 3.58e-22 98.6
MS.gene006723.t1 AT4G10400 26.196 439 280 15 23 450 2 407 3.58e-22 98.6
MS.gene006723.t1 AT4G10400 26.196 439 280 15 23 450 2 407 3.58e-22 98.6
MS.gene006723.t1 AT1G06630 29.859 355 219 14 22 360 11 351 4.74e-22 99.0
MS.gene006723.t1 AT3G58980 28.027 446 265 18 23 432 2 427 6.09e-22 99.4
MS.gene006723.t1 AT3G59160 28.389 391 221 14 22 362 12 393 1.60e-21 97.4
MS.gene006723.t1 AT5G22730 24.228 421 296 9 16 420 22 435 1.85e-21 97.1
MS.gene006723.t1 AT5G22730 24.228 421 296 9 16 420 22 435 1.85e-21 97.1
MS.gene006723.t1 AT3G03040 26.437 435 270 15 23 420 2 423 1.88e-21 97.1
MS.gene006723.t1 AT5G56440 27.295 414 266 11 23 419 2 397 2.03e-21 96.7
MS.gene006723.t1 AT2G29930 26.829 451 273 21 22 438 11 438 2.94e-21 96.3
MS.gene006723.t1 AT2G29930 26.829 451 273 21 22 438 11 438 2.94e-21 96.3
MS.gene006723.t1 AT5G25860 27.529 425 262 15 22 419 11 416 3.26e-21 96.3
MS.gene006723.t1 AT5G44980 23.419 427 301 11 22 432 3 419 3.33e-21 95.9
MS.gene006723.t1 AT5G44980 23.419 427 301 11 22 432 3 419 3.33e-21 95.9
MS.gene006723.t1 AT3G59250 28.675 415 247 14 22 420 6 387 3.72e-21 95.9
MS.gene006723.t1 AT3G49030 26.329 414 262 18 19 416 17 403 4.32e-21 95.9
MS.gene006723.t1 AT1G51370 28.267 375 239 14 22 387 18 371 4.99e-21 95.1
MS.gene006723.t1 AT1G78750 25.362 414 287 13 23 419 18 426 5.38e-21 95.5
MS.gene006723.t1 AT1G78750 25.362 414 287 13 23 419 18 426 5.38e-21 95.5
MS.gene006723.t1 AT5G56380 25.917 436 278 15 23 432 2 418 1.07e-20 94.7
MS.gene006723.t1 AT5G56380 25.917 436 278 15 23 432 2 418 1.07e-20 94.7
MS.gene006723.t1 AT5G41840 29.396 381 220 16 23 362 14 386 1.09e-20 95.1
MS.gene006723.t1 AT1G69630 25.380 461 313 14 9 451 4 451 1.50e-20 94.4
MS.gene006723.t1 AT3G58960 26.281 449 267 18 23 420 2 437 2.03e-20 94.0
MS.gene006723.t1 AT3G59000 26.941 438 266 15 23 420 2 425 2.14e-20 94.0
MS.gene006723.t1 AT1G51370 28.530 347 224 12 22 365 18 343 2.34e-20 92.4
MS.gene006723.t1 AT3G44060 24.828 435 304 11 28 452 4 425 2.47e-20 93.2
MS.gene006723.t1 AT3G60040 25.330 454 281 12 22 444 231 657 5.00e-20 93.6
MS.gene006723.t1 AT3G60040 25.330 454 281 12 22 444 229 655 5.21e-20 93.6
MS.gene006723.t1 AT4G00315 31.381 239 146 7 23 253 2 230 5.33e-20 92.4
MS.gene006723.t1 AT1G66310 26.179 424 285 14 20 430 16 424 5.93e-20 92.4
MS.gene006723.t1 AT3G60040 26.265 415 248 12 22 405 12 399 6.24e-20 93.2
MS.gene006723.t1 AT3G60040 26.265 415 248 12 22 405 231 618 7.00e-20 93.2
MS.gene006723.t1 AT3G60040 26.265 415 248 12 22 405 232 619 8.16e-20 93.2
MS.gene006723.t1 AT5G38590 29.658 263 170 7 23 278 2 256 9.99e-20 89.7
MS.gene006723.t1 AT3G28410 25.205 365 231 15 12 361 19 356 1.10e-19 91.7
MS.gene006723.t1 AT3G26922 27.626 257 175 6 22 273 13 263 1.39e-19 89.4
MS.gene006723.t1 AT3G26922 27.626 257 175 6 22 273 13 263 1.39e-19 89.4
MS.gene006723.t1 AT2G26030 23.934 422 275 18 23 417 4 406 1.98e-19 90.9
MS.gene006723.t1 AT2G26030 23.934 422 275 18 23 417 4 406 1.98e-19 90.9
MS.gene006723.t1 AT5G22660 25.556 450 299 12 22 451 12 445 2.02e-19 90.9
MS.gene006723.t1 AT5G27750 22.603 438 290 14 23 424 5 429 2.82e-19 90.5
MS.gene006723.t1 AT5G50270 26.316 418 262 12 23 419 2 394 2.94e-19 90.1
MS.gene006723.t1 AT3G58900 30.275 327 179 14 23 314 2 314 3.11e-19 88.6
MS.gene006723.t1 AT5G56390 27.007 411 251 15 41 430 21 403 5.18e-19 89.4
MS.gene006723.t1 AT5G02930 26.761 355 227 14 23 361 28 365 5.56e-19 89.7
MS.gene006723.t1 AT3G58900 30.154 325 178 14 23 312 2 312 7.76e-19 87.8
MS.gene006723.t1 AT3G58900 30.154 325 178 14 23 312 2 312 7.76e-19 87.8
MS.gene006723.t1 AT4G26340 25.170 441 275 17 23 444 2 406 8.32e-19 88.6
MS.gene006723.t1 AT2G26030 23.641 423 280 18 23 417 4 411 9.51e-19 88.6
MS.gene006723.t1 AT5G56810 24.832 447 288 14 23 451 15 431 1.48e-18 88.2
MS.gene006723.t1 AT4G00160 25.400 437 288 12 15 436 8 421 1.49e-18 88.2
MS.gene006723.t1 AT1G55660 25.328 458 300 15 18 449 48 489 1.58e-18 88.2
MS.gene006723.t1 AT4G10420 27.517 298 175 11 135 419 22 291 1.61e-18 86.7
MS.gene006723.t1 AT3G59190 27.094 406 252 13 22 400 11 399 2.94e-18 87.8
MS.gene006723.t1 AT4G13960 26.340 429 271 14 23 420 2 416 4.29e-18 87.0
MS.gene006723.t1 AT4G13960 26.340 429 271 14 23 420 2 416 4.29e-18 87.0
MS.gene006723.t1 AT5G56400 25.336 446 292 14 23 452 33 453 4.80e-18 86.7
MS.gene006723.t1 AT5G18780 26.265 415 269 12 22 417 10 406 4.99e-18 86.7
MS.gene006723.t1 AT5G18780 26.265 415 269 12 22 417 10 406 4.99e-18 86.7
MS.gene006723.t1 AT1G78760 23.131 428 293 12 22 432 15 423 5.18e-18 86.7
MS.gene006723.t1 AT5G02700 26.111 360 229 15 11 358 17 351 5.84e-18 86.3
MS.gene006723.t1 AT5G38570 26.714 423 230 18 23 436 2 353 6.53e-18 85.5
MS.gene006723.t1 AT3G62440 24.779 452 291 13 23 436 2 442 8.06e-18 85.9
MS.gene006723.t1 AT5G44960 23.239 426 253 13 23 419 5 385 9.29e-18 85.5
MS.gene006723.t1 AT1G78730 22.936 436 263 14 3 419 7 388 1.03e-17 85.5
MS.gene006723.t1 AT4G13985 24.884 430 297 11 19 429 15 437 1.29e-17 85.5
MS.gene006723.t1 AT3G52680 26.471 442 287 16 15 442 13 430 1.33e-17 85.5
MS.gene006723.t1 AT2G26860 25.118 422 264 12 23 419 2 396 1.43e-17 84.7
MS.gene006723.t1 AT2G26860 25.118 422 264 12 23 419 2 396 1.43e-17 84.7
MS.gene006723.t1 AT3G58920 26.164 451 263 18 23 419 2 436 2.46e-17 84.7
MS.gene006723.t1 AT3G62430 27.523 436 276 14 23 435 2 420 2.63e-17 84.3
MS.gene006723.t1 AT5G35995 27.602 442 256 19 22 419 4 425 2.84e-17 84.3
MS.gene006723.t1 AT5G35995 27.602 442 256 19 22 419 4 425 2.84e-17 84.3
MS.gene006723.t1 AT3G59190 28.022 364 228 12 22 358 11 367 3.15e-17 83.6
MS.gene006723.t1 AT3G58930 26.304 441 274 14 23 420 2 434 3.44e-17 84.3
MS.gene006723.t1 AT3G58930 26.304 441 274 14 23 420 2 434 3.44e-17 84.3
MS.gene006723.t1 AT3G58930 26.304 441 274 14 23 420 2 434 3.44e-17 84.3
MS.gene006723.t1 AT5G60610 25.666 413 263 14 23 419 2 386 3.62e-17 83.6
MS.gene006723.t1 AT5G60610 25.666 413 263 14 23 419 2 386 3.62e-17 83.6
MS.gene006723.t1 AT1G66320 24.178 426 289 14 27 435 34 442 4.05e-17 84.0
MS.gene006723.t1 AT5G56410 25.476 420 260 16 32 419 12 410 5.52e-17 83.6
MS.gene006723.t1 AT5G15620 27.523 436 279 16 23 435 2 423 6.11e-17 83.2
MS.gene006723.t1 AT4G15060 27.540 374 208 16 17 342 18 376 1.05e-16 82.4
MS.gene006723.t1 AT5G56370 25.373 402 254 13 23 410 2 371 1.17e-16 82.4
MS.gene006723.t1 AT5G56370 25.373 402 254 13 23 410 2 371 1.17e-16 82.4
MS.gene006723.t1 AT1G55660 30.415 217 141 6 18 226 48 262 1.17e-16 81.6
MS.gene006723.t1 AT3G26930 25.362 414 267 14 22 417 20 409 1.31e-16 82.4
MS.gene006723.t1 AT5G38396 25.169 445 269 16 23 423 2 426 1.37e-16 82.4
MS.gene006723.t1 AT5G56810 25.267 281 190 7 23 293 15 285 1.41e-16 80.9
MS.gene006723.t1 AT2G04230 25.108 462 291 18 14 449 3 435 1.91e-16 81.6
MS.gene006723.t1 AT3G49030 24.819 415 241 18 19 416 17 377 2.26e-16 81.3
MS.gene006723.t1 AT2G42720 25.109 458 273 17 23 440 2 429 2.74e-16 81.3
MS.gene006723.t1 AT1G06630 28.464 267 171 9 22 275 11 270 4.62e-16 79.3
MS.gene006723.t1 AT5G56820 22.779 439 289 13 23 446 15 418 5.15e-16 80.5
MS.gene006723.t1 AT5G56690 25.185 405 249 15 25 402 4 381 1.34e-15 79.0
MS.gene006723.t1 AT3G49480 26.147 436 273 17 22 431 11 423 1.39e-15 79.0
MS.gene006723.t1 AT4G09920 29.108 213 139 6 23 228 2 209 1.86e-15 77.0
MS.gene006723.t1 AT4G09920 29.108 213 139 6 23 228 2 209 1.86e-15 77.0
MS.gene006723.t1 AT4G09920 29.108 213 139 6 23 228 2 209 1.86e-15 77.0
MS.gene006723.t1 AT1G52650 24.942 429 278 13 23 420 2 417 2.01e-15 78.6
MS.gene006723.t1 AT3G03030 27.985 268 177 8 23 276 2 267 2.33e-15 77.4
MS.gene006723.t1 AT3G52680 27.119 354 226 12 15 360 13 342 2.47e-15 77.8
MS.gene006723.t1 AT5G41830 24.010 404 247 16 22 384 12 396 2.70e-15 78.6
MS.gene006723.t1 AT5G56370 25.723 346 217 10 23 360 2 315 2.71e-15 77.0
MS.gene006723.t1 AT3G59150 27.252 433 275 12 23 420 13 440 2.80e-15 78.2
MS.gene006723.t1 AT4G09920 29.108 213 139 6 23 228 2 209 3.87e-15 76.6
MS.gene006723.t1 AT4G09920 29.108 213 139 6 23 228 2 209 3.87e-15 76.6
MS.gene006723.t1 AT3G44810 27.619 315 210 8 28 330 12 320 5.87e-15 77.0
MS.gene006723.t1 AT4G27050 26.400 375 220 17 23 362 4 357 8.87e-15 76.6
MS.gene006723.t1 AT4G27050 26.400 375 220 17 23 362 4 357 8.87e-15 76.6
MS.gene006723.t1 AT4G27050 26.400 375 220 17 23 362 4 357 8.87e-15 76.6
MS.gene006723.t1 AT4G27050 26.400 375 220 17 23 362 4 357 8.87e-15 76.6
MS.gene006723.t1 AT4G27050 26.400 375 220 17 23 362 4 357 8.87e-15 76.6
MS.gene006723.t1 AT3G42770 25.714 420 275 17 28 430 4 403 9.29e-15 77.0
MS.gene006723.t1 AT1G13780 26.812 276 172 11 23 277 10 276 9.73e-15 75.5
MS.gene006723.t1 AT5G38390 24.307 469 285 16 23 443 2 448 1.19e-14 76.3
MS.gene006723.t1 AT5G02920 30.882 204 120 8 10 207 15 203 1.50e-14 73.9
MS.gene006723.t1 AT4G00320 25.258 388 234 16 22 370 12 382 1.70e-14 75.9
MS.gene006723.t1 AT3G58930 25.935 428 258 13 23 420 2 400 1.88e-14 75.5
MS.gene006723.t1 AT3G58930 25.935 428 258 13 23 420 2 400 1.88e-14 75.5
MS.gene006723.t1 AT3G51530 26.147 436 281 18 22 442 29 438 2.11e-14 75.5
MS.gene006723.t1 AT2G29910 28.731 268 162 11 22 275 4 256 3.53e-14 73.9
MS.gene006723.t1 AT2G29910 28.731 268 162 11 22 275 4 256 3.53e-14 73.9
MS.gene006723.t1 AT2G29910 28.358 268 163 10 22 275 4 256 3.68e-14 73.9
MS.gene006723.t1 AT2G29910 28.358 268 163 10 22 275 4 256 3.68e-14 73.9
MS.gene006723.t1 AT2G29910 28.358 268 163 10 22 275 4 256 3.68e-14 73.9
MS.gene006723.t1 AT2G29910 28.358 268 163 10 22 275 4 256 3.68e-14 73.9
MS.gene006723.t1 AT2G29910 28.261 276 169 11 14 275 20 280 4.53e-14 73.9
MS.gene006723.t1 AT1G16940 24.873 197 131 6 23 213 11 196 5.16e-14 74.3
MS.gene006723.t1 AT3G59180 25.698 358 212 14 109 420 66 415 1.05e-13 73.6
MS.gene006723.t1 AT5G27750 22.911 371 238 13 23 358 5 362 1.60e-13 72.4
MS.gene006723.t1 AT1G60400 26.061 330 207 12 23 334 14 324 1.72e-13 72.4
MS.gene006723.t1 AT5G22610 24.658 438 267 19 21 417 16 431 2.04e-13 72.8
MS.gene006723.t1 AT3G49150 25.577 477 269 21 22 446 15 457 2.05e-13 72.4
MS.gene006723.t1 AT3G26922 25.105 239 168 6 40 273 2 234 2.08e-13 70.9
MS.gene006723.t1 AT3G26922 25.105 239 168 6 40 273 2 234 2.08e-13 70.9
MS.gene006723.t1 AT3G49040 25.095 263 175 8 22 273 16 267 2.11e-13 71.2
MS.gene006723.t1 AT3G49020 24.348 460 293 17 9 446 8 434 3.23e-13 71.6
MS.gene006723.t1 AT5G22700 23.798 416 296 10 14 416 34 441 3.34e-13 72.0
MS.gene006723.t1 AT5G62970 24.781 456 276 18 32 444 12 443 3.68e-13 71.6
MS.gene006723.t1 AT5G02910 26.479 355 225 14 20 361 8 339 3.82e-13 70.9
MS.gene006723.t1 AT5G22610 24.883 426 251 18 21 417 16 401 5.19e-13 71.2
MS.gene006723.t1 AT5G44490 23.598 428 295 12 22 429 16 431 5.20e-13 71.2
MS.gene006723.t1 AT5G44490 23.598 428 295 12 22 429 16 431 6.18e-13 70.9
MS.gene006723.t1 AT4G15060 29.148 223 142 7 23 234 172 389 7.34e-13 70.9
MS.gene006723.t1 AT5G02910 26.479 355 225 14 20 361 8 339 8.69e-13 70.1
MS.gene006723.t1 AT3G26930 23.773 387 253 14 49 417 2 364 8.92e-13 70.1
MS.gene006723.t1 AT5G02910 26.479 355 225 14 20 361 8 339 9.23e-13 70.5
MS.gene006723.t1 AT5G22700 24.611 386 271 9 18 391 1 378 1.09e-12 70.1
MS.gene006723.t1 AT5G22700 24.611 386 271 9 18 391 1 378 1.09e-12 70.1
MS.gene006723.t1 AT5G22700 24.611 386 271 9 18 391 1 378 1.09e-12 70.1
MS.gene006723.t1 AT5G22700 24.611 386 271 9 18 391 1 378 1.09e-12 70.1
MS.gene006723.t1 AT4G03220 24.324 481 293 17 23 446 24 490 1.43e-12 70.1
MS.gene006723.t1 AT3G26920 25.172 290 184 10 139 416 37 305 1.83e-12 68.9
MS.gene006723.t1 AT3G26920 25.172 290 184 10 139 416 37 305 1.83e-12 68.9
MS.gene006723.t1 AT2G29930 26.994 326 191 17 145 438 8 318 1.87e-12 68.6
MS.gene006723.t1 AT5G22730 23.398 359 252 9 16 358 22 373 2.51e-12 68.6
MS.gene006723.t1 AT5G41630 25.627 359 206 14 22 336 11 352 3.27e-12 68.6
MS.gene006723.t1 AT1G80470 25.907 386 241 16 23 387 15 376 5.22e-12 68.2
MS.gene006723.t1 AT1G13570 30.736 231 131 10 18 231 1 219 8.30e-12 66.2
MS.gene006723.t1 AT5G18780 24.438 356 234 10 22 360 10 347 1.32e-11 66.6
MS.gene006723.t1 AT5G18780 24.438 356 234 10 22 360 10 347 1.32e-11 66.6
MS.gene006723.t1 AT3G54910 26.117 291 176 9 140 419 80 342 2.52e-11 65.5
MS.gene006723.t1 AT3G54910 26.117 291 176 9 140 419 80 342 2.52e-11 65.5
MS.gene006723.t1 AT3G54910 26.117 291 176 9 140 419 80 342 2.52e-11 65.5
MS.gene006723.t1 AT5G50270 25.869 259 183 8 23 275 2 257 2.67e-11 65.1
MS.gene006723.t1 AT3G10750 32.278 158 92 6 50 202 2 149 3.57e-11 64.3
MS.gene006723.t1 AT1G13570 30.736 231 131 10 18 231 1 219 3.73e-11 65.1
MS.gene006723.t1 AT1G13570 30.736 231 131 10 18 231 1 219 3.73e-11 65.1
MS.gene006723.t1 AT5G44980 21.498 307 224 6 22 316 3 304 5.45e-11 63.9
MS.gene006723.t1 AT5G44980 21.498 307 224 6 22 316 3 304 5.45e-11 63.9
MS.gene006723.t1 AT1G22000 32.778 180 114 4 25 203 31 204 5.62e-11 64.7
MS.gene006723.t1 AT3G56780 24.431 483 278 19 25 446 9 465 6.32e-11 64.7

Find 81 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAATTTCTTGACATTTA+TGG 0.106011 4.1:+26009286 MS.gene006723:CDS
CAACATGCAGTTCGTTATTT+TGG 0.110661 4.1:-26008443 None:intergenic
ACTAAGTTGGATATAGTATT+TGG 0.170742 4.1:+26008057 MS.gene006723:CDS
GAAAATCAAAGACGGGTAAT+TGG 0.233443 4.1:-26007783 None:intergenic
TAGAATTTCTTGACATTTAT+GGG 0.257267 4.1:+26009287 MS.gene006723:CDS
ACCTACTATTTCTAGATTCT+AGG 0.280979 4.1:-26007996 None:intergenic
TATCGGCCATATGATATCTT+TGG 0.291452 4.1:-26007642 None:intergenic
AAACTTCACCAATCTGATTT+CGG 0.294077 4.1:-26009518 None:intergenic
GTTGATGCATATATTGATCT+TGG 0.309181 4.1:+26008408 MS.gene006723:CDS
TAGAAAATGTCACGTTCTTA+AGG 0.323129 4.1:+26009545 MS.gene006723:CDS
ATGTCAAGAAATTCTAGTTT+AGG 0.324682 4.1:-26009280 None:intergenic
GCTATCAGATGAAACTATTC+AGG 0.345809 4.1:+26008518 MS.gene006723:CDS
CCGGGATGCCGAGAAACTAT+TGG 0.361036 4.1:-26008028 None:intergenic
CCTGTATCAACAATAGTTGA+TGG 0.364163 4.1:-26007913 None:intergenic
CCATCAACTATTGTTGATAC+AGG 0.366559 4.1:+26007913 MS.gene006723:CDS
ATTCTAGTTTAGGACTCTTT+CGG 0.366674 4.1:-26009270 None:intergenic
TTAGGGATCTTACTTATCCT+TGG 0.372669 4.1:+26009405 MS.gene006723:intron
ATCAATATATGCATCAACTA+TGG 0.376573 4.1:-26008403 None:intergenic
ACAAGGAAACAATTTATAGT+TGG 0.386110 4.1:-26008369 None:intergenic
CAAGGAAACAATTTATAGTT+GGG 0.388932 4.1:-26008368 None:intergenic
AGGTACCAATTGCAAGCTTT+AGG 0.426723 4.1:+26009628 MS.gene006723:CDS
TTGATGCATATATTGATCTT+GGG 0.427037 4.1:+26008409 MS.gene006723:CDS
CGGGATGCCGAGAAACTATT+GGG 0.428862 4.1:-26008027 None:intergenic
AAAATCAAAGACGGGTAATT+GGG 0.435838 4.1:-26007782 None:intergenic
GGTGACTTATAATTTCGCTT+TGG 0.436977 4.1:-26007817 None:intergenic
TGTGTTACCCAATAGTTTCT+CGG 0.443039 4.1:+26008020 MS.gene006723:CDS
GCTAATCATATCTTTCATAT+CGG 0.446725 4.1:-26007659 None:intergenic
AAAGATAATATCTTCAAGCT+AGG 0.454542 4.1:-26008114 None:intergenic
ACCTAGAATCTAGAAATAGT+AGG 0.456966 4.1:+26007995 MS.gene006723:CDS
AGAAAATGTCACGTTCTTAA+GGG 0.467231 4.1:+26009546 MS.gene006723:CDS
TAAGCTCCAAAGATATCATA+TGG 0.473626 4.1:+26007636 MS.gene006723:CDS
AATTCCAACATTGAAGAAGT+TGG 0.478445 4.1:+26008254 MS.gene006723:CDS
TTGGTAGTGTCGAGTCTCTC+AGG 0.484028 4.1:+26008496 MS.gene006723:CDS
ACTAGATCTACGAGGCAATC+TGG 0.484619 4.1:-26007838 None:intergenic
TTCTCGTCTCTCTACGGAAG+AGG 0.486845 4.1:+26007714 MS.gene006723:CDS
ATGTCCAACTTCTTCAATGT+TGG 0.494500 4.1:-26008258 None:intergenic
GGTTGGATTTGTGAAGTAGT+TGG 0.497013 4.1:-26007864 None:intergenic
GGATCTTACTTATCCTTGGA+TGG 0.498856 4.1:+26009409 MS.gene006723:CDS
CCGTGCCTAAAGCTTGCAAT+TGG 0.499847 4.1:-26009633 None:intergenic
AAGGACAACTCTTGTAAGAC+AGG 0.508600 4.1:-26008192 None:intergenic
TACCATCAGGTACAGAATCA+AGG 0.516438 4.1:-26008083 None:intergenic
TATCCAACTTAGTCAATGAC+CGG 0.522921 4.1:-26008047 None:intergenic
CTAGGTTAAGTGTAAGATCA+TGG 0.524663 4.1:-26007978 None:intergenic
TTCCTTGATTCTGTACCTGA+TGG 0.531110 4.1:+26008081 MS.gene006723:CDS
ATTGAGCTGTTCAGTCGTCT+TGG 0.533363 4.1:+26008477 MS.gene006723:CDS
ATCCCGGTCATTGACTAAGT+TGG 0.539690 4.1:+26008044 MS.gene006723:CDS
CCAATAGTTTCTCGGCATCC+CGG 0.540751 4.1:+26008028 MS.gene006723:CDS
CTATGGAGGTAGAGTTAACA+AGG 0.542514 4.1:-26008386 None:intergenic
AATATAATGAAGAATTCCCT+CGG 0.546133 4.1:-26007689 None:intergenic
ACTTAAAGATGAAAGATTCA+CGG 0.550056 4.1:-26008334 None:intergenic
AAGATAATATCTTCAAGCTA+GGG 0.550299 4.1:-26008113 None:intergenic
AGCCGACTTCTCATTTGTGA+AGG 0.550930 4.1:-26008148 None:intergenic
GGAGATGAACATTTACTGTA+CGG 0.552497 4.1:+26009567 MS.gene006723:CDS
AGATGAAGCCGAAATCAGAT+TGG 0.557556 4.1:+26009510 MS.gene006723:CDS
CTAGGGAAACAGATACCATC+AGG 0.559011 4.1:-26008096 None:intergenic
AGAGAAGATTTGAAACAGCA+AGG 0.559103 4.1:-26009457 None:intergenic
TATTCTTTCTCGTCTCTCTA+CGG 0.559151 4.1:+26007708 MS.gene006723:CDS
CAATTGCAAGCTTTAGGCAC+GGG 0.559747 4.1:+26009634 MS.gene006723:CDS
TGCGTCAAATTCTTGAACGA+AGG 0.559936 4.1:-26009196 None:intergenic
CTTCTATATTAGCAACAAAG+TGG 0.565241 4.1:+26007746 MS.gene006723:CDS
AAATCTCGAAAATCAAAGAC+GGG 0.570247 4.1:-26007790 None:intergenic
TATCCTTGGATGGTGAAGAC+TGG 0.573895 4.1:+26009419 MS.gene006723:CDS
TGTCCAGTCTTCACCATCCA+AGG 0.574526 4.1:-26009422 None:intergenic
AGATTGCCTCGTAGATCTAG+TGG 0.576199 4.1:+26007840 MS.gene006723:CDS
TCTGCTAATACTTCACAACT+AGG 0.576306 4.1:-26009241 None:intergenic
TACCTTCACAAATGAGAAGT+CGG 0.580484 4.1:+26008146 MS.gene006723:CDS
TAAATCTCGAAAATCAAAGA+CGG 0.582283 4.1:-26007791 None:intergenic
CATCAACTATTGTTGATACA+GGG 0.584309 4.1:+26007914 MS.gene006723:CDS
GAGATGAACATTTACTGTAC+GGG 0.586511 4.1:+26009568 MS.gene006723:CDS
CCAATTGCAAGCTTTAGGCA+CGG 0.594357 4.1:+26009633 MS.gene006723:CDS
ATATAATGAAGAATTCCCTC+GGG 0.598954 4.1:-26007688 None:intergenic
TCATTAACTTGCGACACTCG+TGG 0.605884 4.1:+26009665 MS.gene006723:CDS
AGAATTTCTTGACATTTATG+GGG 0.610502 4.1:+26009288 MS.gene006723:CDS
ATGATTAGCGATTTACCCGA+GGG 0.622620 4.1:+26007673 MS.gene006723:CDS
AATATATGCATCAACTATGG+AGG 0.633314 4.1:-26008400 None:intergenic
ATCCAACTTAGTCAATGACC+GGG 0.638859 4.1:-26008046 None:intergenic
CAACAAAGTGGAGATACTTG+TGG 0.640766 4.1:+26007758 MS.gene006723:CDS
CGAAGAAGCTGGCTGATGTG+AGG 0.641846 4.1:+26009608 MS.gene006723:CDS
TATGATTAGCGATTTACCCG+AGG 0.648778 4.1:+26007672 MS.gene006723:CDS
AGGACAACTCTTGTAAGACA+GGG 0.690229 4.1:-26008191 None:intergenic
GTTGGTCCACTAGATCTACG+AGG 0.818443 4.1:-26007846 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAGTTGAATTAAATG+AGG - chr4.1:26008667-26008686 None:intergenic 15.0%
!! ATTATTTGCATATTCTTTAA+AGG + chr4.1:26008902-26008921 MS.gene006723:intron 15.0%
!! TAAAAAGTTGAATTAAATGA+GGG - chr4.1:26008666-26008685 None:intergenic 15.0%
!! TTATTTGCATATTCTTTAAA+GGG + chr4.1:26008903-26008922 MS.gene006723:intron 15.0%
!!! AGACTTGATTTTTTTTTTAT+TGG + chr4.1:26008734-26008753 MS.gene006723:intron 15.0%
!! AAAAAGTTGAATTAAATGAG+GGG - chr4.1:26008665-26008684 None:intergenic 20.0%
!! AAATTATTGTTAGCCATTAA+AGG - chr4.1:26009350-26009369 None:intergenic 20.0%
!! AAGAATATGCAAATAATACA+AGG - chr4.1:26008899-26008918 None:intergenic 20.0%
!! TAGAATTTCTTGACATTTAT+GGG + chr4.1:26009287-26009306 MS.gene006723:CDS 20.0%
!! TTGCTTATATTTCATTACAA+AGG - chr4.1:26008597-26008616 None:intergenic 20.0%
! AAAGATAATATCTTCAAGCT+AGG - chr4.1:26008117-26008136 None:intergenic 25.0%
! AAGATAATATCTTCAAGCTA+GGG - chr4.1:26008116-26008135 None:intergenic 25.0%
! AATATAATGAAGAATTCCCT+CGG - chr4.1:26007692-26007711 None:intergenic 25.0%
! ACAAGGAAACAATTTATAGT+TGG - chr4.1:26008372-26008391 None:intergenic 25.0%
! ACACCTTCATAAAAATTAGT+TGG + chr4.1:26009015-26009034 MS.gene006723:intron 25.0%
! ACTTAAAGATGAAAGATTCA+CGG - chr4.1:26008337-26008356 None:intergenic 25.0%
! AGAATTTCTTGACATTTATG+GGG + chr4.1:26009288-26009307 MS.gene006723:CDS 25.0%
! ATCAATATATGCATCAACTA+TGG - chr4.1:26008406-26008425 None:intergenic 25.0%
! ATTGTTAAATAAGATCGAAG+TGG - chr4.1:26008627-26008646 None:intergenic 25.0%
! CAAGGAAACAATTTATAGTT+GGG - chr4.1:26008371-26008390 None:intergenic 25.0%
! CTAGAATTTCTTGACATTTA+TGG + chr4.1:26009286-26009305 MS.gene006723:CDS 25.0%
! GCTAATCATATCTTTCATAT+CGG - chr4.1:26007662-26007681 None:intergenic 25.0%
! TAAATCTCGAAAATCAAAGA+CGG - chr4.1:26007794-26007813 None:intergenic 25.0%
! TGTCTATTGTAAATGTTGAT+TGG + chr4.1:26008867-26008886 MS.gene006723:intron 25.0%
! TTGATGCATATATTGATCTT+GGG + chr4.1:26008409-26008428 MS.gene006723:CDS 25.0%
!! ACACCAACTAATTTTTATGA+AGG - chr4.1:26009021-26009040 None:intergenic 25.0%
!! ACTAAGTTGGATATAGTATT+TGG + chr4.1:26008057-26008076 MS.gene006723:CDS 25.0%
!!! ATGTCAAGAAATTCTAGTTT+AGG - chr4.1:26009283-26009302 None:intergenic 25.0%
!!! TGTGTATTGATTCTTGTTTA+GGG + chr4.1:26009388-26009407 MS.gene006723:intron 25.0%
!!! TTGTGTATTGATTCTTGTTT+AGG + chr4.1:26009387-26009406 MS.gene006723:intron 25.0%
AAAATCAAAGACGGGTAATT+GGG - chr4.1:26007785-26007804 None:intergenic 30.0%
AAACTTCACCAATCTGATTT+CGG - chr4.1:26009521-26009540 None:intergenic 30.0%
AAATCTCGAAAATCAAAGAC+GGG - chr4.1:26007793-26007812 None:intergenic 30.0%
AATATATGCATCAACTATGG+AGG - chr4.1:26008403-26008422 None:intergenic 30.0%
AATTCCAACATTGAAGAAGT+TGG + chr4.1:26008254-26008273 MS.gene006723:CDS 30.0%
ACCTAGAATCTAGAAATAGT+AGG + chr4.1:26007995-26008014 MS.gene006723:CDS 30.0%
AGAAAATGTCACGTTCTTAA+GGG + chr4.1:26009546-26009565 MS.gene006723:CDS 30.0%
ATATAATGAAGAATTCCCTC+GGG - chr4.1:26007691-26007710 None:intergenic 30.0%
ATCAAAAAAATCGAAGAAGC+TGG + chr4.1:26009597-26009616 MS.gene006723:CDS 30.0%
ATCGTTGTGACATTTAAAGA+AGG - chr4.1:26009112-26009131 None:intergenic 30.0%
CACACTACGTAATACTTAAA+GGG - chr4.1:26008818-26008837 None:intergenic 30.0%
CATCAACTATTGTTGATACA+GGG + chr4.1:26007914-26007933 MS.gene006723:CDS 30.0%
CTAAAAGACACCTTCATAAA+AGG + chr4.1:26009008-26009027 MS.gene006723:intron 30.0%
CTTCTATATTAGCAACAAAG+TGG + chr4.1:26007746-26007765 MS.gene006723:CDS 30.0%
GTTGATGCATATATTGATCT+TGG + chr4.1:26008408-26008427 MS.gene006723:CDS 30.0%
TAAGCTCCAAAGATATCATA+TGG + chr4.1:26007636-26007655 MS.gene006723:CDS 30.0%
TAGAAAATGTCACGTTCTTA+AGG + chr4.1:26009545-26009564 MS.gene006723:CDS 30.0%
TCACACTACGTAATACTTAA+AGG - chr4.1:26008819-26008838 None:intergenic 30.0%
TCGTTGTGACATTTAAAGAA+GGG - chr4.1:26009111-26009130 None:intergenic 30.0%
TTATTGTTAGCCATTAAAGG+TGG - chr4.1:26009347-26009366 None:intergenic 30.0%
! CAATGAAGAGCTCTTTTATA+CGG - chr4.1:26007888-26007907 None:intergenic 30.0%
! TGTGATATTTCAGATTTTCG+TGG + chr4.1:26009487-26009506 MS.gene006723:CDS 30.0%
!! ACCTACTATTTCTAGATTCT+AGG - chr4.1:26007999-26008018 None:intergenic 30.0%
!! ATGACCCAATTTGTTAATCA+TGG + chr4.1:26008694-26008713 MS.gene006723:intron 30.0%
!! ATTCTAGTTTAGGACTCTTT+CGG - chr4.1:26009273-26009292 None:intergenic 30.0%
AAAGTGAAAATCACACCTTG+AGG - chr4.1:26008973-26008992 None:intergenic 35.0%
ACCCTCCATGATTAACAAAT+TGG - chr4.1:26008702-26008721 None:intergenic 35.0%
ATGTCCAACTTCTTCAATGT+TGG - chr4.1:26008261-26008280 None:intergenic 35.0%
ATTGCTAAAAGACACCTTCA+TGG - chr4.1:26008945-26008964 None:intergenic 35.0%
CCATCAACTATTGTTGATAC+AGG + chr4.1:26007913-26007932 MS.gene006723:CDS 35.0%
CCCTCCATGATTAACAAATT+GGG - chr4.1:26008701-26008720 None:intergenic 35.0%
CCTGTATCAACAATAGTTGA+TGG - chr4.1:26007916-26007935 None:intergenic 35.0%
CTAGGTTAAGTGTAAGATCA+TGG - chr4.1:26007981-26008000 None:intergenic 35.0%
GAAAATCAAAGACGGGTAAT+TGG - chr4.1:26007786-26007805 None:intergenic 35.0%
GAGATGAACATTTACTGTAC+GGG + chr4.1:26009568-26009587 MS.gene006723:CDS 35.0%
GCTATCAGATGAAACTATTC+AGG + chr4.1:26008518-26008537 MS.gene006723:CDS 35.0%
GGAGATGAACATTTACTGTA+CGG + chr4.1:26009567-26009586 MS.gene006723:CDS 35.0%
GGTGACTTATAATTTCGCTT+TGG - chr4.1:26007820-26007839 None:intergenic 35.0%
GTCCTTCGAAAAATGTTACT+GGG + chr4.1:26008209-26008228 MS.gene006723:CDS 35.0%
TACCTTCACAAATGAGAAGT+CGG + chr4.1:26008146-26008165 MS.gene006723:CDS 35.0%
TATCCAACTTAGTCAATGAC+CGG - chr4.1:26008050-26008069 None:intergenic 35.0%
TATCGGCCATATGATATCTT+TGG - chr4.1:26007645-26007664 None:intergenic 35.0%
TATTCTTTCTCGTCTCTCTA+CGG + chr4.1:26007708-26007727 MS.gene006723:CDS 35.0%
TCTGCTAATACTTCACAACT+AGG - chr4.1:26009244-26009263 None:intergenic 35.0%
TGTCCTTCGAAAAATGTTAC+TGG + chr4.1:26008208-26008227 MS.gene006723:CDS 35.0%
TGTGTTACCCAATAGTTTCT+CGG + chr4.1:26008020-26008039 MS.gene006723:CDS 35.0%
TTAGGGATCTTACTTATCCT+TGG + chr4.1:26009405-26009424 MS.gene006723:intron 35.0%
TTGCTAAAAGACACCTTCAT+GGG - chr4.1:26009024-26009005 None:intergenic 35.0%
! AGAGAAGATTTGAAACAGCA+AGG - chr4.1:26009460-26009479 None:intergenic 35.0%
! CAACATGCAGTTCGTTATTT+TGG - chr4.1:26008446-26008465 None:intergenic 35.0%
! CTAGAAGACACCTTTTATGA+AGG - chr4.1:26009083-26009102 None:intergenic 35.0%
! TTTTCTTCTGCCACCTTTAA+TGG + chr4.1:26009334-26009353 MS.gene006723:intron 35.0%
!! ACCCAATTTGTTAATCATGG+AGG + chr4.1:26008697-26008716 MS.gene006723:intron 35.0%
!! CCCAATTTGTTAATCATGGA+GGG + chr4.1:26008698-26008717 MS.gene006723:intron 35.0%
AAAGGTGGCAGAAGAAAATC+TGG - chr4.1:26009332-26009351 None:intergenic 40.0%
AAGGACAACTCTTGTAAGAC+AGG - chr4.1:26008195-26008214 None:intergenic 40.0%
AGATGAAGCCGAAATCAGAT+TGG + chr4.1:26009510-26009529 MS.gene006723:CDS 40.0%
AGGACAACTCTTGTAAGACA+GGG - chr4.1:26008194-26008213 None:intergenic 40.0%
AGGTACCAATTGCAAGCTTT+AGG + chr4.1:26009628-26009647 MS.gene006723:CDS 40.0%
ATCCAACTTAGTCAATGACC+GGG - chr4.1:26008049-26008068 None:intergenic 40.0%
ATGATTAGCGATTTACCCGA+GGG + chr4.1:26007673-26007692 MS.gene006723:CDS 40.0%
CAACAAAGTGGAGATACTTG+TGG + chr4.1:26007758-26007777 MS.gene006723:CDS 40.0%
CGTAGTTAAGACACTAGCAA+GGG - chr4.1:26009153-26009172 None:intergenic 40.0%
CTATGGAGGTAGAGTTAACA+AGG - chr4.1:26008389-26008408 None:intergenic 40.0%
GGATCTTACTTATCCTTGGA+TGG + chr4.1:26009409-26009428 MS.gene006723:CDS 40.0%
GGTTGGATTTGTGAAGTAGT+TGG - chr4.1:26007867-26007886 None:intergenic 40.0%
TACCATCAGGTACAGAATCA+AGG - chr4.1:26008086-26008105 None:intergenic 40.0%
TATGATTAGCGATTTACCCG+AGG + chr4.1:26007672-26007691 MS.gene006723:CDS 40.0%
TGCGTCAAATTCTTGAACGA+AGG - chr4.1:26009199-26009218 None:intergenic 40.0%
TTCCTTGATTCTGTACCTGA+TGG + chr4.1:26008081-26008100 MS.gene006723:CDS 40.0%
! GAAGAGCTCTTTTATACGGT+TGG - chr4.1:26007884-26007903 None:intergenic 40.0%
! TTTTAGCAATCCACACCTCA+AGG + chr4.1:26008955-26008974 MS.gene006723:intron 40.0%
!! CACCCAGTAACATTTTTCGA+AGG - chr4.1:26008214-26008233 None:intergenic 40.0%
!!! CGGCTCAAAGACTTTTTTCT+GGG + chr4.1:26008166-26008185 MS.gene006723:CDS 40.0%
!!! TCGGCTCAAAGACTTTTTTC+TGG + chr4.1:26008165-26008184 MS.gene006723:CDS 40.0%
ACTAGATCTACGAGGCAATC+TGG - chr4.1:26007841-26007860 None:intergenic 45.0%
AGATTGCCTCGTAGATCTAG+TGG + chr4.1:26007840-26007859 MS.gene006723:CDS 45.0%
ATTGAGCTGTTCAGTCGTCT+TGG + chr4.1:26008477-26008496 MS.gene006723:CDS 45.0%
CTAAAAGACACCTTCATGGG+TGG - chr4.1:26008941-26008960 None:intergenic 45.0%
CTAGGGAAACAGATACCATC+AGG - chr4.1:26008099-26008118 None:intergenic 45.0%
GAAAATCACACCTTGAGGTG+TGG - chr4.1:26008968-26008987 None:intergenic 45.0%
GCGTAGTTAAGACACTAGCA+AGG - chr4.1:26009154-26009173 None:intergenic 45.0%
TATCCTTGGATGGTGAAGAC+TGG + chr4.1:26009419-26009438 MS.gene006723:CDS 45.0%
! AGCCGACTTCTCATTTGTGA+AGG - chr4.1:26008151-26008170 None:intergenic 45.0%
! ATCCCGGTCATTGACTAAGT+TGG + chr4.1:26008044-26008063 MS.gene006723:CDS 45.0%
!! CAATTGCAAGCTTTAGGCAC+GGG + chr4.1:26009634-26009653 MS.gene006723:CDS 45.0%
!! CCAATTGCAAGCTTTAGGCA+CGG + chr4.1:26009633-26009652 MS.gene006723:CDS 45.0%
!! TCATTAACTTGCGACACTCG+TGG + chr4.1:26009665-26009684 MS.gene006723:CDS 45.0%
CCAATAGTTTCTCGGCATCC+CGG + chr4.1:26008028-26008047 MS.gene006723:CDS 50.0%
CCGTGCCTAAAGCTTGCAAT+TGG - chr4.1:26009636-26009655 None:intergenic 50.0%
CGGGATGCCGAGAAACTATT+GGG - chr4.1:26008030-26008049 None:intergenic 50.0%
GTTGGTCCACTAGATCTACG+AGG - chr4.1:26007849-26007868 None:intergenic 50.0%
TGTCCAGTCTTCACCATCCA+AGG - chr4.1:26009425-26009444 None:intergenic 50.0%
TTCTCGTCTCTCTACGGAAG+AGG + chr4.1:26007714-26007733 MS.gene006723:CDS 50.0%
TTGCTAGAAGCCACCCATGA+AGG + chr4.1:26008928-26008947 MS.gene006723:intron 50.0%
!! TTGGTAGTGTCGAGTCTCTC+AGG + chr4.1:26008496-26008515 MS.gene006723:CDS 50.0%
CCGGGATGCCGAGAAACTAT+TGG - chr4.1:26008031-26008050 None:intergenic 55.0%
CGAAGAAGCTGGCTGATGTG+AGG + chr4.1:26009608-26009627 MS.gene006723:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 26007604 26009693 26007604 ID=MS.gene006723
chr4.1 mRNA 26007604 26009693 26007604 ID=MS.gene006723.t1;Parent=MS.gene006723
chr4.1 exon 26007604 26008539 26007604 ID=MS.gene006723.t1.exon1;Parent=MS.gene006723.t1
chr4.1 CDS 26007604 26008539 26007604 ID=cds.MS.gene006723.t1;Parent=MS.gene006723.t1
chr4.1 exon 26009160 26009309 26009160 ID=MS.gene006723.t1.exon2;Parent=MS.gene006723.t1
chr4.1 CDS 26009160 26009309 26009160 ID=cds.MS.gene006723.t1;Parent=MS.gene006723.t1
chr4.1 exon 26009409 26009693 26009409 ID=MS.gene006723.t1.exon3;Parent=MS.gene006723.t1
chr4.1 CDS 26009409 26009693 26009409 ID=cds.MS.gene006723.t1;Parent=MS.gene006723.t1
Gene Sequence

>MS.gene006723

ATGGCTTCTACAATCTCATCATCAAATTCACATAAGCTCCAAAGATATCATATGGCCGATATGAAAGATATGATTAGCGATTTACCCGAGGGAATTCTTCATTATATTCTTTCTCGTCTCTCTACGGAAGAGGCTGTAAGAACTTCTATATTAGCAACAAAGTGGAGATACTTGTGGACCCAATTACCCGTCTTTGATTTTCGAGATTTATCTCCAAAGCGAAATTATAAGTCACCAGATTGCCTCGTAGATCTAGTGGACCAACTACTTCACAAATCCAACCGTATAAAAGAGCTCTTCATTGAATTACCATCAACTATTGTTGATACAGGGAAAGTTACTTCAATGTTATCTTCTGCATTGATGCATGATGTCCATGATCTTACACTTAACCTAGAATCTAGAAATAGTAGGTTTGTGTTACCCAATAGTTTCTCGGCATCCCGGTCATTGACTAAGTTGGATATAGTATTTGGCTTCCTTGATTCTGTACCTGATGGTATCTGTTTCCCTAGCTTGAAGATATTATCTTTTGCACATCTTACCTTCACAAATGAGAAGTCGGCTCAAAGACTTTTTTCTGGGTGCCCTGTCTTACAAGAGTTGTCCTTCGAAAAATGTTACTGGGTGAACATAAACATTAGTGTTGCAATTCCAACATTGAAGAAGTTGGACATCTTTTTCAGATCTTCTAGTCTAGATCGTAACAGTTGTATGTTCGAAATTGATGCCGTGAATCTTTCATCTTTAAGTTACAAAAGTAACCCAACTATAAATTGTTTCCTTGTTAACTCTACCTCCATAGTTGATGCATATATTGATCTTGGGTTTTTCTGTGTCCAAAATAACGAACTGCATGTTGCTATATTTGCAATTGAGCTGTTCAGTCGTCTTGGTAGTGTCGAGTCTCTCAGGCTATCAGATGAAACTATTCAGGTATGTTTGAATGTTTACTTATTGTCTTCATTAATATAATATAAATATTGTACTCCTTTGTAATGAAATATAAGCAAATCTTAACCACTTCGATCTTATTTAACAATAGTATCTCTATATTACCCCTCATTTAATTCAACTTTTTATATTTTCAATGACCCAATTTGTTAATCATGGAGGGTAGATTAGACAACAGACTTGATTTTTTTTTTATTGGATTGCATCACTTAAATTTGATCAATTACATTTCTTAATATGCTTAATAACAGTTTTGACCCTTTAAGTATTACGTAGTGTGATCAATTTATGTTTATAATTTATAGATAATGTCTATTGTAAATGTTGATTGGTCATGTCCTTGTATTATTTGCATATTCTTTAAAGGGTTTTGCTAGAAGCCACCCATGAAGGTGTCTTTTAGCAATCCACACCTCAAGGTGTGATTTTCACTTTTTAGTTATAACTTTGCTAAAAGACACCTTCATAAAAATTAGTTGGTGTCTTTTAGCAAATGCTCATAGAATAACTTTCTAAAAGACACCTTCATAAAAGGTGTCTTCTAGCAAAACCCTTCTTTAAATGTCACAACGATCTTGACTTGTTTTTGTTTCCCTTGCTAGTGTCTTAACTACGCAAAATATGCTCTTCATCTTTTACCTTCGTTCAAGAATTTGACGCATCTTGAAGTGCATTTCGACGATCCTAGTTGTGAAGTATTAGCAGACATTCTCCGAAAGAGTCCTAAACTAGAATTTCTTGACATTTATGGGGTACATCTTGTATCTTGCTCCAGATTTTCTTCTGCCACCTTTAATGGCTAACAATAATTTTATCTCAGTCTATTGACTTGTGTATTGATTCTTGTTTAGGGATCTTACTTATCCTTGGATGGTGAAGACTGGACATCAGATTCATTGCCTTGCTGTTTCAAATCTTCTCTCAAATCATGTGATATTTCAGATTTTCGTGGAGATGAAGCCGAAATCAGATTGGTGAAGTTTTTGTTAGAAAATGTCACGTTCTTAAGGGAGATGAACATTTACTGTACGGGATATCTATCAAAAAAATCGAAGAAGCTGGCTGATGTGAGGTACCAATTGCAAGCTTTAGGCACGGGAAGTTGTGTCATTAACTTGCGACACTCGTGGTTTTGA

Protein sequence

>MS.gene006723.t1

MASTISSSNSHKLQRYHMADMKDMISDLPEGILHYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDLSPKRNYKSPDCLVDLVDQLLHKSNRIKELFIELPSTIVDTGKVTSMLSSALMHDVHDLTLNLESRNSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHLTFTNEKSAQRLFSGCPVLQELSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSCMFEIDAVNLSSLSYKSNPTINCFLVNSTSIVDAYIDLGFFCVQNNELHVAIFAIELFSRLGSVESLRLSDETIQCLNYAKYALHLLPSFKNLTHLEVHFDDPSCEVLADILRKSPKLEFLDIYGGSYLSLDGEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTFLREMNIYCTGYLSKKSKKLADVRYQLQALGTGSCVINLRHSWF