AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031577


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031577.t1 MTR_4g080590 95.395 456 21 0 1 456 1 456 0.0 887
MS.gene031577.t1 MTR_4g080590 95.028 362 18 0 1 362 1 362 0.0 698
MS.gene031577.t1 MTR_3g048290 47.447 470 232 7 1 456 1 469 7.43e-125 372
MS.gene031577.t1 MTR_4g080787 46.008 476 229 8 1 456 1 468 6.09e-123 367
MS.gene031577.t1 MTR_4g130200 47.124 452 171 7 1 448 1 388 5.20e-116 346
MS.gene031577.t1 MTR_4g080773 44.350 469 236 8 1 449 1 464 4.40e-113 342
MS.gene031577.t1 MTR_4g080773 44.350 469 236 8 1 449 1 464 6.90e-113 342
MS.gene031577.t1 MTR_5g039950 44.662 459 208 6 1 452 1 420 1.85e-107 325
MS.gene031577.t1 MTR_7g023310 45.043 464 232 11 1 450 1 455 1.83e-103 316
MS.gene031577.t1 MTR_5g039970 54.630 324 137 4 5 319 1 323 1.93e-99 301
MS.gene031577.t1 MTR_7g023330 40.393 458 198 10 6 452 3 396 4.25e-89 277
MS.gene031577.t1 MTR_7g039630 43.784 370 166 6 1 360 1 338 1.01e-76 243
MS.gene031577.t1 MTR_4g080807 41.899 358 169 5 90 443 1 323 2.29e-70 229
MS.gene031577.t1 MTR_2g094750 44.355 372 171 14 21 358 88 457 2.80e-68 226
MS.gene031577.t1 MTR_4g081030 37.037 378 211 9 8 371 2 366 2.18e-53 184
MS.gene031577.t1 MTR_5g005690 27.766 461 271 12 9 419 3 451 1.98e-32 129
MS.gene031577.t1 MTR_2g072530 26.316 437 306 11 15 442 5 434 8.29e-28 115
MS.gene031577.t1 MTR_5g080710 27.896 423 280 13 6 420 16 421 6.33e-26 110
MS.gene031577.t1 MTR_8g467800 28.571 427 258 15 20 419 17 423 5.45e-25 107
MS.gene031577.t1 MTR_4g045900 23.313 489 303 16 23 446 26 507 2.58e-24 105
MS.gene031577.t1 MTR_3g107160 25.995 427 216 14 20 421 7 358 4.13e-24 103
MS.gene031577.t1 MTR_8g062270 28.188 447 273 17 20 435 13 442 9.64e-23 100
MS.gene031577.t1 MTR_1g082260 41.667 144 81 1 73 213 23 166 1.92e-22 94.7
MS.gene031577.t1 MTR_2g007450 25.850 441 221 14 23 420 16 393 2.57e-22 99.0
MS.gene031577.t1 MTR_5g084070 26.747 415 273 12 14 420 4 395 3.00e-22 99.0
MS.gene031577.t1 MTR_2g005990 25.843 445 237 18 18 433 1 381 1.48e-21 96.7
MS.gene031577.t1 MTR_4g080813 58.333 72 30 0 5 76 1 72 3.83e-21 88.2
MS.gene031577.t1 MTR_4g032845 26.077 441 290 17 21 439 1 427 6.52e-21 95.1
MS.gene031577.t1 MTR_7g094030 27.751 418 274 14 22 421 27 434 8.11e-21 95.1
MS.gene031577.t1 MTR_2g007500 28.792 389 200 19 19 396 10 332 8.55e-20 90.5
MS.gene031577.t1 MTR_7g098510 24.714 437 237 15 7 425 2 364 1.11e-19 90.9
MS.gene031577.t1 MTR_2g082850 26.857 350 234 14 22 356 21 363 1.97e-19 90.1
MS.gene031577.t1 MTR_7g056433 24.201 438 238 14 14 430 3 367 1.28e-18 87.8
MS.gene031577.t1 MTR_2g072720 24.681 470 312 16 1 445 16 468 3.50e-18 87.0
MS.gene031577.t1 MTR_7g075820 25.231 432 229 17 18 420 1 367 1.41e-17 84.7
MS.gene031577.t1 MTR_1g090883 27.733 375 233 11 5 360 1 356 1.61e-17 84.3
MS.gene031577.t1 MTR_4g032730 22.796 465 304 15 20 444 12 461 2.03e-17 84.7
MS.gene031577.t1 MTR_8g058965 27.483 433 266 16 19 420 9 424 2.03e-17 84.7
MS.gene031577.t1 MTR_5g073420 23.419 427 245 13 23 439 11 365 9.21e-17 82.0
MS.gene031577.t1 MTR_8g468840 26.651 424 271 17 21 419 12 420 1.10e-16 82.4
MS.gene031577.t1 MTR_5g083890 24.724 453 239 15 18 433 1 388 1.50e-16 82.4
MS.gene031577.t1 MTR_2g082800 26.077 418 256 19 11 406 14 400 1.90e-16 81.3
MS.gene031577.t1 MTR_7g088260 25.874 429 221 17 22 430 90 441 2.19e-16 81.6
MS.gene031577.t1 MTR_3g107120 24.344 419 232 12 23 419 9 364 2.23e-16 81.3
MS.gene031577.t1 MTR_3g107100 24.272 412 237 12 20 419 8 356 2.37e-16 81.3
MS.gene031577.t1 MTR_3g108150 25.532 423 232 17 22 430 12 365 5.81e-16 79.7
MS.gene031577.t1 MTR_2g082880 24.586 423 274 14 19 421 6 403 7.26e-16 79.7
MS.gene031577.t1 MTR_8g467800 30.370 270 164 12 20 275 17 276 1.85e-15 77.8
MS.gene031577.t1 MTR_3g448340 26.846 447 261 20 18 419 1 426 1.90e-15 78.6
MS.gene031577.t1 MTR_7g098480 25.355 422 239 16 7 419 2 356 4.31e-15 77.8
MS.gene031577.t1 MTR_3g108560 23.349 424 243 13 18 430 15 367 6.06e-15 76.6
MS.gene031577.t1 MTR_6g022360 27.163 416 213 16 20 422 40 378 7.64e-15 76.6
MS.gene031577.t1 MTR_1g038760 26.667 345 223 11 11 344 2 327 9.46e-15 75.9
MS.gene031577.t1 MTR_1g038760 26.667 345 223 11 11 344 2 327 1.16e-14 75.5
MS.gene031577.t1 MTR_8g066650 27.744 328 220 9 16 335 73 391 1.52e-14 75.9
MS.gene031577.t1 MTR_6g018660 24.474 380 228 13 12 356 9 364 2.18e-14 75.1
MS.gene031577.t1 MTR_2g072730 24.434 442 288 14 1 418 1 420 2.57e-14 75.1
MS.gene031577.t1 MTR_1g038710 25.995 427 270 18 23 420 19 428 4.10e-14 74.7
MS.gene031577.t1 MTR_0049s0110 25.829 422 255 17 23 424 8 391 6.06e-14 73.9
MS.gene031577.t1 MTR_8g445780 26.866 402 257 14 19 404 9 389 1.23e-13 72.8
MS.gene031577.t1 MTR_5g038430 29.412 221 144 8 14 226 87 303 2.40e-13 72.4
MS.gene031577.t1 MTR_8g014160 25.714 420 233 20 18 419 35 393 3.24e-13 71.6
MS.gene031577.t1 MTR_6g088700 27.964 329 213 12 22 338 13 329 4.47e-13 70.9
MS.gene031577.t1 MTR_2g091145 25.935 428 256 17 23 424 21 413 4.92e-13 71.2
MS.gene031577.t1 MTR_8g469020 25.858 437 261 17 23 420 7 419 6.03e-13 70.9
MS.gene031577.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 7.07e-13 69.3
MS.gene031577.t1 MTR_7g055943 23.624 436 256 14 6 427 24 396 8.20e-13 70.5
MS.gene031577.t1 MTR_3g023470 26.966 356 236 11 14 357 6 349 1.32e-12 69.3
MS.gene031577.t1 MTR_5g092960 25.751 466 280 18 20 444 16 456 2.04e-12 69.3
MS.gene031577.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 2.22e-12 68.6
MS.gene031577.t1 MTR_3g110010 30.939 181 122 3 22 202 12 189 2.36e-12 69.7
MS.gene031577.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 2.51e-12 68.2
MS.gene031577.t1 MTR_4g056030 24.943 437 284 19 20 431 6 423 2.63e-12 68.9
MS.gene031577.t1 MTR_6g025160 25.391 256 171 7 13 259 91 335 2.65e-12 68.6
MS.gene031577.t1 MTR_8g014260 26.386 451 285 17 5 430 1 429 3.13e-12 68.6
MS.gene031577.t1 MTR_3g109982 30.939 181 122 3 22 202 12 189 3.73e-12 68.9
MS.gene031577.t1 MTR_3g036320 27.410 332 208 11 22 335 19 335 4.15e-12 67.8
MS.gene031577.t1 MTR_1g011410 24.925 333 214 11 23 347 7 311 6.19e-12 68.2
MS.gene031577.t1 MTR_5g087940 24.332 337 206 11 19 336 22 328 6.38e-12 67.4
MS.gene031577.t1 MTR_2g047848 25.472 424 250 17 23 417 7 393 1.24e-11 66.6
MS.gene031577.t1 MTR_3g036250 28.342 187 123 5 23 202 5 187 1.49e-11 66.2
MS.gene031577.t1 MTR_1g011430 29.437 231 141 9 23 239 7 229 1.53e-11 66.2
MS.gene031577.t1 MTR_1g013630 30.244 205 121 10 18 206 33 231 1.61e-11 66.2
MS.gene031577.t1 MTR_8g017280 27.488 211 118 8 22 208 35 234 1.74e-11 65.5
MS.gene031577.t1 MTR_7g026500 34.074 135 78 6 307 435 251 380 1.79e-11 66.2
MS.gene031577.t1 MTR_3g023330 26.974 304 203 9 22 314 14 309 1.95e-11 65.9
MS.gene031577.t1 MTR_7g084080 28.916 249 161 9 19 257 13 255 2.10e-11 65.1
MS.gene031577.t1 MTR_1g021825 32.569 218 120 10 23 226 88 292 2.49e-11 65.9
MS.gene031577.t1 MTR_1g021825 32.569 218 120 10 23 226 17 221 2.50e-11 65.9
MS.gene031577.t1 MTR_1g021820 29.515 227 135 9 23 232 28 246 2.66e-11 65.9
MS.gene031577.t1 MTR_4g056020 23.380 432 291 16 23 431 9 423 2.87e-11 65.9
MS.gene031577.t1 MTR_8g017280 28.000 175 101 6 22 182 35 198 3.36e-11 65.5
MS.gene031577.t1 MTR_7g025650 25.067 375 233 12 22 358 18 382 3.53e-11 65.5
MS.gene031577.t1 MTR_0227s0010 30.918 207 118 10 14 205 6 202 4.36e-11 64.3
MS.gene031577.t1 MTR_1g014450 28.390 236 142 12 18 234 10 237 4.46e-11 65.1
MS.gene031577.t1 MTR_3g108560 27.128 188 124 4 18 202 15 192 6.05e-11 63.9
MS.gene031577.t1 MTR_1g025870 25.049 507 263 21 6 418 4 487 6.97e-11 64.7
MS.gene031577.t1 MTR_8g018340 24.691 324 209 12 18 311 1 319 8.44e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031577.t1 AT4G14096 28.355 462 288 16 18 451 3 449 1.98e-33 131
MS.gene031577.t1 AT4G14096 28.355 462 288 16 18 451 3 449 1.98e-33 131
MS.gene031577.t1 AT3G59210 29.806 463 264 17 22 442 6 449 1.57e-30 123
MS.gene031577.t1 AT3G59210 29.806 463 264 17 22 442 6 449 1.57e-30 123
MS.gene031577.t1 AT3G59210 29.806 463 264 17 22 442 6 449 1.57e-30 123
MS.gene031577.t1 AT3G59210 29.806 463 264 17 22 442 6 449 1.57e-30 123
MS.gene031577.t1 AT3G59210 29.806 463 264 17 22 442 6 449 1.57e-30 123
MS.gene031577.t1 AT1G78840 29.762 420 253 14 22 419 4 403 2.01e-30 122
MS.gene031577.t1 AT1G78840 29.762 420 253 14 22 419 4 403 2.01e-30 122
MS.gene031577.t1 AT3G58880 29.195 435 256 17 21 420 1 418 3.33e-30 122
MS.gene031577.t1 AT4G14103 29.363 361 232 11 18 362 3 356 1.11e-29 119
MS.gene031577.t1 AT4G14103 29.363 361 232 11 18 362 3 356 1.11e-29 119
MS.gene031577.t1 AT4G14103 27.313 454 278 16 18 451 3 424 1.70e-29 120
MS.gene031577.t1 AT3G58860 28.603 451 289 15 23 452 7 445 5.37e-29 119
MS.gene031577.t1 AT5G53840 27.934 426 288 12 22 442 17 428 6.70e-28 115
MS.gene031577.t1 AT3G58900 29.120 443 249 18 23 420 2 424 9.54e-28 115
MS.gene031577.t1 AT5G44950 26.887 424 263 13 22 419 3 405 1.48e-27 114
MS.gene031577.t1 AT1G51370 28.571 420 265 17 22 430 18 413 1.85e-26 111
MS.gene031577.t1 AT3G03030 27.064 436 279 14 23 424 2 432 7.54e-26 110
MS.gene031577.t1 AT4G13965 26.606 436 282 15 23 447 10 418 8.87e-26 109
MS.gene031577.t1 AT3G59240 27.477 444 282 15 22 434 7 441 1.14e-25 109
MS.gene031577.t1 AT3G59230 28.051 467 286 18 22 447 11 468 1.44e-25 109
MS.gene031577.t1 AT1G66290 26.128 421 287 13 19 429 25 431 2.66e-25 108
MS.gene031577.t1 AT5G38590 26.577 444 272 16 23 447 2 410 3.49e-25 107
MS.gene031577.t1 AT1G32375 26.585 410 267 11 23 419 2 390 3.76e-25 107
MS.gene031577.t1 AT1G32375 26.585 410 267 11 23 419 2 390 3.76e-25 107
MS.gene031577.t1 AT1G66300 25.647 425 288 14 23 434 29 438 1.44e-24 106
MS.gene031577.t1 AT5G56420 25.432 405 275 11 18 415 1 385 3.70e-24 104
MS.gene031577.t1 AT5G56420 25.432 405 275 11 18 415 1 385 3.70e-24 104
MS.gene031577.t1 AT5G56420 25.432 405 275 11 18 415 1 385 3.70e-24 104
MS.gene031577.t1 AT4G22280 28.636 440 276 15 23 452 2 413 4.33e-24 104
MS.gene031577.t1 AT1G58310 29.630 378 223 11 22 362 7 378 4.86e-24 105
MS.gene031577.t1 AT1G13780 24.893 466 294 17 23 452 10 455 5.56e-24 104
MS.gene031577.t1 AT3G59170 29.139 453 251 19 22 420 6 442 6.68e-24 104
MS.gene031577.t1 AT3G50710 26.281 449 275 17 23 446 2 419 1.38e-23 102
MS.gene031577.t1 AT3G59200 26.180 466 275 17 22 435 6 454 1.86e-23 103
MS.gene031577.t1 AT4G22280 31.322 348 210 11 23 360 2 330 3.20e-23 100
MS.gene031577.t1 AT2G42730 26.637 443 291 14 20 437 2 435 3.30e-23 102
MS.gene031577.t1 AT5G22720 27.869 427 259 14 22 417 22 430 3.31e-23 102
MS.gene031577.t1 AT5G53635 28.058 417 265 11 24 419 1 403 4.21e-23 101
MS.gene031577.t1 AT3G58980 28.251 446 264 18 23 432 2 427 1.50e-22 100
MS.gene031577.t1 AT1G78750 26.000 450 303 14 23 451 18 458 1.75e-22 100
MS.gene031577.t1 AT1G78750 26.000 450 303 14 23 451 18 458 1.75e-22 100
MS.gene031577.t1 AT3G49030 25.676 444 287 18 19 446 17 433 2.65e-22 99.4
MS.gene031577.t1 AT4G10400 26.424 439 279 15 23 450 2 407 2.70e-22 99.0
MS.gene031577.t1 AT4G10400 26.424 439 279 15 23 450 2 407 2.70e-22 99.0
MS.gene031577.t1 AT4G10400 26.424 439 279 15 23 450 2 407 2.70e-22 99.0
MS.gene031577.t1 AT1G55030 25.547 411 254 15 23 415 9 385 2.85e-22 99.0
MS.gene031577.t1 AT1G55030 25.547 411 254 15 23 415 19 395 2.93e-22 99.0
MS.gene031577.t1 AT5G22670 27.229 415 271 13 22 419 10 410 5.43e-22 98.6
MS.gene031577.t1 AT5G44980 23.653 427 300 11 22 432 3 419 5.99e-22 98.2
MS.gene031577.t1 AT5G44980 23.653 427 300 11 22 432 3 419 5.99e-22 98.2
MS.gene031577.t1 AT1G51370 28.723 376 236 15 22 387 18 371 8.66e-22 97.4
MS.gene031577.t1 AT1G16930 25.059 423 277 13 23 419 15 423 1.02e-21 97.8
MS.gene031577.t1 AT1G16930 25.059 423 277 13 23 419 15 423 1.02e-21 97.8
MS.gene031577.t1 AT1G16930 25.059 423 277 13 23 419 15 423 1.02e-21 97.8
MS.gene031577.t1 AT3G59160 28.645 391 220 15 22 362 12 393 1.34e-21 97.4
MS.gene031577.t1 AT5G56440 27.536 414 265 11 23 419 2 397 1.55e-21 97.1
MS.gene031577.t1 AT3G59200 26.630 368 227 12 22 358 6 361 1.58e-21 96.3
MS.gene031577.t1 AT3G03040 26.207 435 271 15 23 420 2 423 1.70e-21 97.1
MS.gene031577.t1 AT1G51370 29.023 348 221 13 22 365 18 343 4.12e-21 94.7
MS.gene031577.t1 AT5G22730 24.408 422 294 10 16 420 22 435 5.10e-21 95.9
MS.gene031577.t1 AT5G22730 24.408 422 294 10 16 420 22 435 5.10e-21 95.9
MS.gene031577.t1 AT5G25860 27.059 425 264 14 22 419 11 416 6.02e-21 95.5
MS.gene031577.t1 AT5G41840 30.312 353 198 17 23 335 14 358 6.11e-21 95.9
MS.gene031577.t1 AT1G66310 27.119 413 273 14 20 419 16 413 8.29e-21 94.7
MS.gene031577.t1 AT3G59250 28.434 415 248 14 22 420 6 387 9.69e-21 94.7
MS.gene031577.t1 AT3G28410 25.753 365 229 15 12 361 19 356 1.98e-20 94.0
MS.gene031577.t1 AT1G06630 28.249 354 226 12 22 360 11 351 2.04e-20 92.8
MS.gene031577.t1 AT1G06630 28.249 354 226 12 22 360 11 351 2.04e-20 92.8
MS.gene031577.t1 AT3G59000 26.712 438 267 15 23 420 2 425 2.14e-20 94.0
MS.gene031577.t1 AT1G69630 26.340 429 285 14 9 419 4 419 2.21e-20 93.6
MS.gene031577.t1 AT2G29930 28.074 431 257 21 22 419 11 421 2.74e-20 93.6
MS.gene031577.t1 AT2G29930 28.074 431 257 21 22 419 11 421 2.74e-20 93.6
MS.gene031577.t1 AT5G27750 22.654 437 291 13 23 424 5 429 2.84e-20 93.6
MS.gene031577.t1 AT3G58960 26.281 449 267 18 23 420 2 437 3.04e-20 93.6
MS.gene031577.t1 AT5G56390 27.578 417 241 18 41 430 21 403 3.10e-20 93.2
MS.gene031577.t1 AT1G06630 28.249 354 226 12 22 360 11 351 3.88e-20 92.4
MS.gene031577.t1 AT1G06630 28.249 354 226 12 22 360 11 351 3.88e-20 92.4
MS.gene031577.t1 AT1G06630 28.249 354 226 12 22 360 11 351 3.88e-20 92.4
MS.gene031577.t1 AT1G06630 28.249 354 226 12 22 360 11 351 3.88e-20 92.4
MS.gene031577.t1 AT4G00315 31.381 239 146 7 23 253 2 230 4.47e-20 92.8
MS.gene031577.t1 AT5G38590 29.658 263 170 7 23 278 2 256 5.11e-20 90.5
MS.gene031577.t1 AT1G06630 28.249 354 226 12 22 360 20 360 5.83e-20 92.0
MS.gene031577.t1 AT3G26922 27.626 257 175 6 22 273 13 263 6.93e-20 90.5
MS.gene031577.t1 AT3G26922 27.626 257 175 6 22 273 13 263 6.93e-20 90.5
MS.gene031577.t1 AT1G06630 28.249 354 226 12 22 360 11 351 8.89e-20 92.0
MS.gene031577.t1 AT3G44060 24.368 435 306 11 28 452 4 425 9.17e-20 91.7
MS.gene031577.t1 AT5G56400 24.887 442 299 11 23 452 33 453 1.19e-19 91.7
MS.gene031577.t1 AT5G22660 26.316 418 273 11 22 419 12 414 1.42e-19 91.3
MS.gene031577.t1 AT3G60040 25.561 446 290 15 22 444 231 657 1.47e-19 92.0
MS.gene031577.t1 AT3G60040 25.561 446 290 15 22 444 229 655 1.58e-19 92.0
MS.gene031577.t1 AT3G60040 25.561 446 290 15 22 444 12 438 1.59e-19 92.0
MS.gene031577.t1 AT3G60040 25.561 446 290 15 22 444 231 657 1.88e-19 92.0
MS.gene031577.t1 AT3G60040 25.561 446 290 15 22 444 232 658 2.07e-19 91.7
MS.gene031577.t1 AT5G02930 27.042 355 226 14 23 361 28 365 2.17e-19 90.9
MS.gene031577.t1 AT5G50270 26.415 424 254 15 23 419 2 394 4.22e-19 89.4
MS.gene031577.t1 AT5G44960 23.294 425 254 12 23 419 5 385 4.31e-19 89.7
MS.gene031577.t1 AT3G58900 29.969 327 180 14 23 314 2 314 4.33e-19 88.2
MS.gene031577.t1 AT5G56810 25.056 447 287 14 23 451 15 431 5.98e-19 89.4
MS.gene031577.t1 AT1G55660 26.340 429 274 15 18 420 48 460 6.66e-19 89.4
MS.gene031577.t1 AT5G02700 26.667 360 227 15 11 358 17 351 1.04e-18 88.6
MS.gene031577.t1 AT3G58900 29.846 325 179 14 23 312 2 312 1.24e-18 87.0
MS.gene031577.t1 AT3G58900 29.846 325 179 14 23 312 2 312 1.24e-18 87.0
MS.gene031577.t1 AT3G62440 25.164 457 293 13 23 441 2 447 1.38e-18 88.2
MS.gene031577.t1 AT5G56380 25.446 448 285 16 23 444 2 426 1.41e-18 88.2
MS.gene031577.t1 AT5G56380 25.446 448 285 16 23 444 2 426 1.41e-18 88.2
MS.gene031577.t1 AT4G10420 27.517 298 175 11 135 419 22 291 1.98e-18 86.3
MS.gene031577.t1 AT4G13985 25.116 430 296 11 19 429 15 437 2.22e-18 87.8
MS.gene031577.t1 AT5G18780 27.098 417 263 13 22 417 10 406 2.29e-18 87.4
MS.gene031577.t1 AT5G18780 27.098 417 263 13 22 417 10 406 2.29e-18 87.4
MS.gene031577.t1 AT4G00160 25.167 449 297 13 15 446 8 434 2.42e-18 87.4
MS.gene031577.t1 AT1G78760 23.557 433 285 13 22 432 15 423 5.72e-18 86.3
MS.gene031577.t1 AT5G56410 26.366 421 255 17 32 419 12 410 6.19e-18 86.7
MS.gene031577.t1 AT3G59190 27.273 407 250 14 22 400 11 399 7.05e-18 86.7
MS.gene031577.t1 AT1G66320 24.648 426 287 14 27 435 34 442 9.23e-18 85.9
MS.gene031577.t1 AT3G52680 26.682 446 281 18 15 442 13 430 1.05e-17 85.5
MS.gene031577.t1 AT2G26030 23.278 421 279 17 23 417 4 406 1.58e-17 85.1
MS.gene031577.t1 AT2G26030 23.278 421 279 17 23 417 4 406 1.58e-17 85.1
MS.gene031577.t1 AT3G62430 28.146 437 272 15 23 435 2 420 1.61e-17 85.1
MS.gene031577.t1 AT3G58920 26.386 451 262 18 23 419 2 436 1.93e-17 85.1
MS.gene031577.t1 AT4G26340 25.000 440 275 17 23 443 2 405 2.63e-17 84.3
MS.gene031577.t1 AT5G56370 25.926 405 248 15 23 410 2 371 3.91e-17 83.6
MS.gene031577.t1 AT5G56370 25.926 405 248 15 23 410 2 371 3.91e-17 83.6
MS.gene031577.t1 AT5G60610 25.243 412 266 14 23 419 2 386 4.00e-17 83.2
MS.gene031577.t1 AT5G60610 25.243 412 266 14 23 419 2 386 4.00e-17 83.2
MS.gene031577.t1 AT5G35995 26.526 475 280 20 22 452 4 453 4.28e-17 84.0
MS.gene031577.t1 AT5G35995 26.526 475 280 20 22 452 4 453 4.28e-17 84.0
MS.gene031577.t1 AT3G58930 26.077 441 275 14 23 420 2 434 4.35e-17 84.0
MS.gene031577.t1 AT3G58930 26.077 441 275 14 23 420 2 434 4.35e-17 84.0
MS.gene031577.t1 AT3G58930 26.077 441 275 14 23 420 2 434 4.35e-17 84.0
MS.gene031577.t1 AT4G13960 26.744 430 268 16 23 420 2 416 4.60e-17 83.6
MS.gene031577.t1 AT4G13960 26.744 430 268 16 23 420 2 416 4.60e-17 83.6
MS.gene031577.t1 AT5G56810 27.203 261 172 6 23 273 15 267 4.80e-17 82.0
MS.gene031577.t1 AT3G59190 28.219 365 226 13 22 358 11 367 5.13e-17 83.2
MS.gene031577.t1 AT2G26030 22.434 419 290 15 23 417 4 411 5.31e-17 83.6
MS.gene031577.t1 AT2G26860 25.180 417 270 12 23 419 2 396 6.03e-17 82.8
MS.gene031577.t1 AT2G26860 25.180 417 270 12 23 419 2 396 6.03e-17 82.8
MS.gene031577.t1 AT2G04230 24.945 453 296 15 14 444 3 433 6.46e-17 83.2
MS.gene031577.t1 AT5G38570 26.526 426 227 19 23 436 2 353 8.71e-17 82.4
MS.gene031577.t1 AT3G26930 25.362 414 267 14 22 417 20 409 9.52e-17 82.8
MS.gene031577.t1 AT1G55660 30.415 217 141 6 18 226 48 262 9.64e-17 82.0
MS.gene031577.t1 AT3G49030 24.270 445 266 18 19 446 17 407 1.00e-16 82.4
MS.gene031577.t1 AT4G26350 24.413 426 256 16 23 416 2 393 1.12e-16 82.4
MS.gene031577.t1 AT5G38396 24.944 445 270 16 23 423 2 426 1.35e-16 82.4
MS.gene031577.t1 AT3G49480 26.267 434 275 15 22 431 11 423 1.59e-16 82.0
MS.gene031577.t1 AT5G56690 25.185 405 249 15 25 402 4 381 2.55e-16 80.9
MS.gene031577.t1 AT4G15060 27.297 370 214 15 17 342 18 376 3.13e-16 80.9
MS.gene031577.t1 AT2G42720 25.225 444 266 16 23 426 2 419 6.17e-16 80.1
MS.gene031577.t1 AT5G41830 25.310 403 243 16 22 384 12 396 8.53e-16 80.1
MS.gene031577.t1 AT4G27050 26.667 375 219 17 23 362 4 357 1.13e-15 79.3
MS.gene031577.t1 AT4G27050 26.667 375 219 17 23 362 4 357 1.13e-15 79.3
MS.gene031577.t1 AT4G27050 26.667 375 219 17 23 362 4 357 1.13e-15 79.3
MS.gene031577.t1 AT4G27050 26.667 375 219 17 23 362 4 357 1.13e-15 79.3
MS.gene031577.t1 AT4G27050 26.667 375 219 17 23 362 4 357 1.13e-15 79.3
MS.gene031577.t1 AT3G03030 27.985 268 177 8 23 276 2 267 1.14e-15 78.6
MS.gene031577.t1 AT4G09920 29.577 213 138 6 23 228 2 209 1.17e-15 77.8
MS.gene031577.t1 AT4G09920 29.577 213 138 6 23 228 2 209 1.17e-15 77.8
MS.gene031577.t1 AT4G09920 29.577 213 138 6 23 228 2 209 1.17e-15 77.8
MS.gene031577.t1 AT5G56370 26.361 349 211 12 23 360 2 315 1.20e-15 78.2
MS.gene031577.t1 AT5G56820 22.273 440 290 13 23 446 15 418 1.84e-15 78.6
MS.gene031577.t1 AT4G09920 29.577 213 138 6 23 228 2 209 2.04e-15 77.4
MS.gene031577.t1 AT4G09920 29.577 213 138 6 23 228 2 209 2.04e-15 77.4
MS.gene031577.t1 AT3G44810 27.619 315 210 8 28 330 12 320 2.07e-15 78.6
MS.gene031577.t1 AT3G52680 27.374 358 220 14 15 360 13 342 3.08e-15 77.4
MS.gene031577.t1 AT1G06630 27.715 267 173 9 22 275 11 270 3.53e-15 76.6
MS.gene031577.t1 AT3G59150 27.021 433 276 12 23 420 13 440 4.66e-15 77.8
MS.gene031577.t1 AT1G13780 26.354 277 172 10 23 277 10 276 5.40e-15 76.3
MS.gene031577.t1 AT1G60400 26.667 330 205 12 23 334 14 324 5.48e-15 77.0
MS.gene031577.t1 AT4G00320 26.289 388 230 17 22 370 12 382 5.93e-15 77.4
MS.gene031577.t1 AT5G02920 30.882 204 120 8 10 207 15 203 1.51e-14 73.9
MS.gene031577.t1 AT5G27750 22.826 368 238 12 23 356 5 360 1.54e-14 75.5
MS.gene031577.t1 AT3G42770 25.728 412 271 16 28 423 4 396 2.51e-14 75.5
MS.gene031577.t1 AT3G58930 25.701 428 259 13 23 420 2 400 2.70e-14 75.1
MS.gene031577.t1 AT3G58930 25.701 428 259 13 23 420 2 400 2.70e-14 75.1
MS.gene031577.t1 AT4G03220 22.917 480 301 18 23 446 24 490 3.24e-14 75.1
MS.gene031577.t1 AT5G38390 24.130 431 273 14 23 420 2 411 3.76e-14 74.7
MS.gene031577.t1 AT3G58940 25.874 429 258 16 23 419 2 402 3.80e-14 75.1
MS.gene031577.t1 AT3G58940 25.874 429 258 16 23 419 2 402 3.80e-14 75.1
MS.gene031577.t1 AT3G54160 28.125 384 215 19 84 432 48 405 3.97e-14 74.7
MS.gene031577.t1 AT1G52650 24.709 429 279 14 23 420 2 417 4.19e-14 74.7
MS.gene031577.t1 AT3G49040 25.095 263 175 8 22 273 16 267 5.97e-14 72.8
MS.gene031577.t1 AT2G29910 28.731 268 162 11 22 275 4 256 6.06e-14 73.2
MS.gene031577.t1 AT2G29910 28.731 268 162 11 22 275 4 256 6.06e-14 73.2
MS.gene031577.t1 AT2G29910 28.731 268 162 11 22 275 4 256 6.14e-14 73.6
MS.gene031577.t1 AT2G29910 28.731 268 162 11 22 275 4 256 6.14e-14 73.6
MS.gene031577.t1 AT2G29910 28.731 268 162 11 22 275 4 256 6.14e-14 73.6
MS.gene031577.t1 AT2G29910 28.731 268 162 11 22 275 4 256 6.14e-14 73.6
MS.gene031577.t1 AT2G29910 28.261 276 169 11 14 275 20 280 6.22e-14 73.6
MS.gene031577.t1 AT3G51530 25.917 436 282 18 22 442 29 438 7.73e-14 73.6
MS.gene031577.t1 AT3G26922 25.105 239 168 6 40 273 2 234 1.16e-13 71.6
MS.gene031577.t1 AT3G26922 25.105 239 168 6 40 273 2 234 1.16e-13 71.6
MS.gene031577.t1 AT5G22700 24.279 416 294 10 14 416 34 441 1.17e-13 73.2
MS.gene031577.t1 AT1G16940 24.873 197 131 5 23 213 11 196 1.37e-13 72.8
MS.gene031577.t1 AT3G59180 25.419 358 213 14 109 420 66 415 2.54e-13 72.4
MS.gene031577.t1 AT3G49020 24.289 457 291 17 9 443 8 431 2.85e-13 72.0
MS.gene031577.t1 AT5G22610 24.318 440 266 19 21 417 16 431 3.16e-13 72.0
MS.gene031577.t1 AT5G44490 24.065 428 293 12 22 429 16 431 3.88e-13 71.6
MS.gene031577.t1 AT5G41630 25.627 359 206 14 22 336 11 352 4.14e-13 71.6
MS.gene031577.t1 AT5G44490 24.065 428 293 12 22 429 16 431 4.25e-13 71.6
MS.gene031577.t1 AT5G44970 24.752 303 205 9 130 418 58 351 4.62e-13 70.9
MS.gene031577.t1 AT5G22700 25.130 386 269 9 18 391 1 378 5.02e-13 71.2
MS.gene031577.t1 AT5G22700 25.130 386 269 9 18 391 1 378 5.02e-13 71.2
MS.gene031577.t1 AT5G22700 25.130 386 269 9 18 391 1 378 5.02e-13 71.2
MS.gene031577.t1 AT5G22700 25.130 386 269 9 18 391 1 378 5.02e-13 71.2
MS.gene031577.t1 AT3G26930 23.773 387 253 14 49 417 2 364 5.60e-13 70.9
MS.gene031577.t1 AT3G49150 25.105 474 275 21 22 446 15 457 6.81e-13 70.9
MS.gene031577.t1 AT5G22610 24.533 428 250 18 21 417 16 401 7.67e-13 70.9
MS.gene031577.t1 AT5G02910 26.761 355 224 15 20 361 8 339 9.48e-13 69.7
MS.gene031577.t1 AT1G80470 26.031 388 238 16 23 387 15 376 1.29e-12 70.1
MS.gene031577.t1 AT5G62970 25.055 451 267 17 36 441 16 440 1.33e-12 69.7
MS.gene031577.t1 AT4G15060 28.767 219 148 6 23 234 172 389 1.53e-12 70.1
MS.gene031577.t1 AT3G26920 24.601 313 202 11 116 416 15 305 1.88e-12 68.6
MS.gene031577.t1 AT3G26920 24.601 313 202 11 116 416 15 305 1.88e-12 68.6
MS.gene031577.t1 AT5G02910 26.761 355 224 15 20 361 8 339 2.14e-12 68.9
MS.gene031577.t1 AT5G02910 26.761 355 224 15 20 361 8 339 2.19e-12 69.3
MS.gene031577.t1 AT5G18780 25.419 358 228 11 22 360 10 347 5.86e-12 67.4
MS.gene031577.t1 AT5G18780 25.419 358 228 11 22 360 10 347 5.86e-12 67.4
MS.gene031577.t1 AT5G22730 23.611 360 250 10 16 358 22 373 5.89e-12 67.8
MS.gene031577.t1 AT2G29930 27.362 307 178 16 145 419 8 301 6.92e-12 67.0
MS.gene031577.t1 AT1G13570 30.736 231 131 10 18 231 1 219 7.50e-12 66.2
MS.gene031577.t1 AT1G22000 33.333 180 113 4 25 203 31 204 1.03e-11 67.0
MS.gene031577.t1 AT3G10750 32.278 158 92 6 50 202 2 149 1.52e-11 65.5
MS.gene031577.t1 AT1G13570 30.736 231 131 10 18 231 1 219 2.64e-11 65.9
MS.gene031577.t1 AT1G13570 30.736 231 131 10 18 231 1 219 2.64e-11 65.9
MS.gene031577.t1 AT5G22660 25.564 266 181 5 22 277 12 270 3.95e-11 64.3
MS.gene031577.t1 AT5G44980 21.498 307 224 6 22 316 3 304 5.16e-11 63.9
MS.gene031577.t1 AT5G44980 21.498 307 224 6 22 316 3 304 5.16e-11 63.9
MS.gene031577.t1 AT5G22700 24.510 408 262 15 14 416 34 400 9.07e-11 63.9

Find 76 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAAATTTCTTGACATTTA+TGG 0.077508 4.4:+31192101 MS.gene031577:CDS
CAACATGCAGTTCGTTATTT+TGG 0.110661 4.4:-31191255 None:intergenic
ACTAAGTTGGATATAGTATT+TGG 0.170742 4.4:+31190869 MS.gene031577:CDS
TAAAATTTCTTGACATTTAT+GGG 0.232152 4.4:+31192102 MS.gene031577:CDS
GAAAATCAAAGACGGGTAAT+TGG 0.233443 4.4:-31190595 None:intergenic
TATCAGCCATATGATATCTT+TGG 0.279426 4.4:-31190454 None:intergenic
AAACTTCACCAATCTGATTT+CGG 0.294077 4.4:-31192333 None:intergenic
GTTGATGCATATATTGATCT+TGG 0.309181 4.4:+31191220 MS.gene031577:CDS
TAGAAAATGTCACGTTCTTA+AGG 0.323129 4.4:+31192360 MS.gene031577:CDS
GCTATCAGATGAAACTATTC+AGG 0.345809 4.4:+31191330 MS.gene031577:CDS
CCGGGATGCCGAGAAACTAT+TGG 0.361036 4.4:-31190840 None:intergenic
CCTGTATCAACAATAGTTGA+TGG 0.364163 4.4:-31190725 None:intergenic
CCATCAACTATTGTTGATAC+AGG 0.366559 4.4:+31190725 MS.gene031577:CDS
TTAGGGATCTTACTTATCCT+TGG 0.372669 4.4:+31192220 MS.gene031577:intron
ATCAATATATGCATCAACTA+TGG 0.376573 4.4:-31191215 None:intergenic
ACAAGGAAACAATTTATAGT+TGG 0.386110 4.4:-31191181 None:intergenic
CAAGGAAACAATTTATAGTT+GGG 0.388932 4.4:-31191180 None:intergenic
CGTGTTACCCAATAGTTTCT+CGG 0.406753 4.4:+31190832 MS.gene031577:CDS
AGGAACCAATTGCAAGCTTT+AGG 0.419691 4.4:+31192443 MS.gene031577:CDS
TTGATGCATATATTGATCTT+GGG 0.427037 4.4:+31191221 MS.gene031577:CDS
CGGGATGCCGAGAAACTATT+GGG 0.428862 4.4:-31190839 None:intergenic
AAAATCAAAGACGGGTAATT+GGG 0.435838 4.4:-31190594 None:intergenic
CCATGCCTAAAGCTTGCAAT+TGG 0.438162 4.4:-31192448 None:intergenic
AAAGATAATATCTTCAAGCT+AGG 0.454542 4.4:-31190926 None:intergenic
AGAAAATGTCACGTTCTTAA+GGG 0.467231 4.4:+31192361 MS.gene031577:CDS
GGTGACTTAGAATTTCGCTT+TGG 0.469597 4.4:-31190629 None:intergenic
TAAGCTCCAAAGATATCATA+TGG 0.474879 4.4:+31190448 MS.gene031577:CDS
AATTCCAACATTGAAGAAGT+TGG 0.478445 4.4:+31191066 MS.gene031577:CDS
TTGGTAGTGTCGAGTCTCTC+AGG 0.484028 4.4:+31191308 MS.gene031577:CDS
ACTAGATCTACGAGGCAATC+TGG 0.484619 4.4:-31190650 None:intergenic
TTCTCGTCTCTCTACGGAAG+AGG 0.486845 4.4:+31190526 MS.gene031577:CDS
ATGTCCAACTTCTTCAATGT+TGG 0.494500 4.4:-31191070 None:intergenic
GGTTGGATTTGTGAAGTAGT+TGG 0.497013 4.4:-31190676 None:intergenic
GGATCTTACTTATCCTTGGA+TGG 0.498856 4.4:+31192224 MS.gene031577:CDS
AAGGACAACTCTTGTAAGAC+AGG 0.508600 4.4:-31191004 None:intergenic
TACCATCAGGTACAGAATCA+AGG 0.516438 4.4:-31190895 None:intergenic
TATCCAACTTAGTCAATGAC+CGG 0.522921 4.4:-31190859 None:intergenic
CTAGGTTAAGTGTAAGATCA+TGG 0.524663 4.4:-31190790 None:intergenic
TTCCTTGATTCTGTACCTGA+TGG 0.531110 4.4:+31190893 MS.gene031577:CDS
ATTGAGCTGTTCAGTCGTCT+TGG 0.533363 4.4:+31191289 MS.gene031577:CDS
ATCCCGGTCATTGACTAAGT+TGG 0.539690 4.4:+31190856 MS.gene031577:CDS
CCAATAGTTTCTCGGCATCC+CGG 0.540751 4.4:+31190840 MS.gene031577:CDS
CTATGGAGGTAGAGTTAACA+AGG 0.542514 4.4:-31191198 None:intergenic
AATATAATGAAGAATTCCCT+CGG 0.546133 4.4:-31190501 None:intergenic
CAATTGCAAGCTTTAGGCAT+GGG 0.547449 4.4:+31192449 MS.gene031577:CDS
ACTTAAAGATGAAAGATTCA+CGG 0.550056 4.4:-31191146 None:intergenic
AAGATAATATCTTCAAGCTA+GGG 0.550299 4.4:-31190925 None:intergenic
AGCCGACTTCTCATTTGTGA+AGG 0.550930 4.4:-31190960 None:intergenic
GGAGATGAACATTTACTGTA+CGG 0.552497 4.4:+31192382 MS.gene031577:CDS
AGATGAAGCCGAAATCAGAT+TGG 0.557556 4.4:+31192325 MS.gene031577:CDS
CTAGGGAAACAGATACCATC+AGG 0.559011 4.4:-31190908 None:intergenic
AGAGAAGATTTGAAACAGCA+AGG 0.559103 4.4:-31192272 None:intergenic
TATTCTTTCTCGTCTCTCTA+CGG 0.559151 4.4:+31190520 MS.gene031577:CDS
TGCGTCAAATTCTTGAACGA+AGG 0.559936 4.4:-31192011 None:intergenic
CTTCTATATTAGCAACAAAG+TGG 0.565241 4.4:+31190558 MS.gene031577:CDS
AAATCTCGAAAATCAAAGAC+GGG 0.570247 4.4:-31190602 None:intergenic
TATCCTTGGATGGTGAAGAC+TGG 0.573895 4.4:+31192234 MS.gene031577:CDS
TGTCCAGTCTTCACCATCCA+AGG 0.574526 4.4:-31192237 None:intergenic
CCAATTGCAAGCTTTAGGCA+TGG 0.576197 4.4:+31192448 MS.gene031577:CDS
AGATTGCCTCGTAGATCTAG+TGG 0.576199 4.4:+31190652 MS.gene031577:CDS
TCTGCTAATACTTCACAACT+AGG 0.576306 4.4:-31192056 None:intergenic
TACCTTCACAAATGAGAAGT+CGG 0.580484 4.4:+31190958 MS.gene031577:CDS
AAAATTTCTTGACATTTATG+GGG 0.581406 4.4:+31192103 MS.gene031577:CDS
TAAATCTCGAAAATCAAAGA+CGG 0.582283 4.4:-31190603 None:intergenic
CATCAACTATTGTTGATACA+GGG 0.584309 4.4:+31190726 MS.gene031577:CDS
TCATTAACTTGCGTCACTCG+TGG 0.584904 4.4:+31192480 MS.gene031577:CDS
GAGATGAACATTTACTGTAC+GGG 0.586511 4.4:+31192383 MS.gene031577:CDS
ATATAATGAAGAATTCCCTC+GGG 0.598954 4.4:-31190500 None:intergenic
CGAAGAAGCTGGCTGATGTG+AGG 0.621819 4.4:+31192423 MS.gene031577:CDS
ATGATTAGCGATTTACCCGA+GGG 0.622620 4.4:+31190485 MS.gene031577:CDS
AATATATGCATCAACTATGG+AGG 0.633314 4.4:-31191212 None:intergenic
ATCCAACTTAGTCAATGACC+GGG 0.638859 4.4:-31190858 None:intergenic
CAACAAAGTGGAGATACTTG+TGG 0.640766 4.4:+31190570 MS.gene031577:CDS
TATGATTAGCGATTTACCCG+AGG 0.648778 4.4:+31190484 MS.gene031577:CDS
AGGACAACTCTTGTAAGACA+GGG 0.690229 4.4:-31191003 None:intergenic
GTTGGTCCACTAGATCTACG+AGG 0.818443 4.4:-31190658 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAGTTAAATTAAATG+AGG - chr4.4:31191479-31191498 None:intergenic 10.0%
!! TAAAAAGTTAAATTAAATGA+GGG - chr4.4:31191478-31191497 None:intergenic 10.0%
!!! CTTGATTTTTTTTTTTTTAT+TGG + chr4.4:31191549-31191568 MS.gene031577:intron 10.0%
!! AAAAAGTTAAATTAAATGAG+GGG - chr4.4:31191477-31191496 None:intergenic 15.0%
!! AAGAATATGCAAATAATATA+AGG - chr4.4:31191714-31191733 None:intergenic 15.0%
!! ATTATTTGCATATTCTTTAA+AGG + chr4.4:31191717-31191736 MS.gene031577:intron 15.0%
!! TAAAATTTCTTGACATTTAT+GGG + chr4.4:31192102-31192121 MS.gene031577:CDS 15.0%
!! TTATTTGCATATTCTTTAAA+GGG + chr4.4:31191718-31191737 MS.gene031577:intron 15.0%
!! AAAATTTCTTGACATTTATG+GGG + chr4.4:31192103-31192122 MS.gene031577:CDS 20.0%
!! CTAAAATTTCTTGACATTTA+TGG + chr4.4:31192101-31192120 MS.gene031577:CDS 20.0%
!! GATCAATTACATTTCTTAAT+AGG + chr4.4:31191590-31191609 MS.gene031577:intron 20.0%
!! TTGCTTATATTTCATTACAA+AGG - chr4.4:31191409-31191428 None:intergenic 20.0%
!!! ATGTCAAGAAATTTTAGTTT+AGG - chr4.4:31192098-31192117 None:intergenic 20.0%
! AAAGATAATATCTTCAAGCT+AGG - chr4.4:31190929-31190948 None:intergenic 25.0%
! AAATTATTGTTAGCCGTTAA+AGG - chr4.4:31192165-31192184 None:intergenic 25.0%
! AAGATAATATCTTCAAGCTA+GGG - chr4.4:31190928-31190947 None:intergenic 25.0%
! AATATAATGAAGAATTCCCT+CGG - chr4.4:31190504-31190523 None:intergenic 25.0%
! ACAAGGAAACAATTTATAGT+TGG - chr4.4:31191184-31191203 None:intergenic 25.0%
! ACACCTTCATAAAAATTAGT+TGG + chr4.4:31191830-31191849 MS.gene031577:intron 25.0%
! ACCTAGAATCTAAAAATAGT+AGG + chr4.4:31190807-31190826 MS.gene031577:CDS 25.0%
! ACTTAAAGATGAAAGATTCA+CGG - chr4.4:31191149-31191168 None:intergenic 25.0%
! ATCAATATATGCATCAACTA+TGG - chr4.4:31191218-31191237 None:intergenic 25.0%
! ATGACCCAATTTATTAATCA+TGG + chr4.4:31191506-31191525 MS.gene031577:intron 25.0%
! ATTGTTAAATAAGATCGAAG+TGG - chr4.4:31191439-31191458 None:intergenic 25.0%
! CAAGGAAACAATTTATAGTT+GGG - chr4.4:31191183-31191202 None:intergenic 25.0%
! TAAATCTCGAAAATCAAAGA+CGG - chr4.4:31190606-31190625 None:intergenic 25.0%
! TTGATGCATATATTGATCTT+GGG + chr4.4:31191221-31191240 MS.gene031577:CDS 25.0%
!! ACACCAACTAATTTTTATGA+AGG - chr4.4:31191836-31191855 None:intergenic 25.0%
!! ACTAAGTTGGATATAGTATT+TGG + chr4.4:31190869-31190888 MS.gene031577:CDS 25.0%
!!! ACCTACTATTTTTAGATTCT+AGG - chr4.4:31190811-31190830 None:intergenic 25.0%
!!! ATTTTAGTTTAGGACTCTTT+CGG - chr4.4:31192088-31192107 None:intergenic 25.0%
!!! TGTGTATTGATTCTTGTTTA+GGG + chr4.4:31192203-31192222 MS.gene031577:intron 25.0%
!!! TTGTGTATTGATTCTTGTTT+AGG + chr4.4:31192202-31192221 MS.gene031577:intron 25.0%
AAAATCAAAGACGGGTAATT+GGG - chr4.4:31190597-31190616 None:intergenic 30.0%
AAACTTCACCAATCTGATTT+CGG - chr4.4:31192336-31192355 None:intergenic 30.0%
AAATCTCGAAAATCAAAGAC+GGG - chr4.4:31190605-31190624 None:intergenic 30.0%
AATATATGCATCAACTATGG+AGG - chr4.4:31191215-31191234 None:intergenic 30.0%
AATTCCAACATTGAAGAAGT+TGG + chr4.4:31191066-31191085 MS.gene031577:CDS 30.0%
ACCCAATTTATTAATCATGG+AGG + chr4.4:31191509-31191528 MS.gene031577:intron 30.0%
ACCCTCCATGATTAATAAAT+TGG - chr4.4:31191514-31191533 None:intergenic 30.0%
AGAAAATGTCACGTTCTTAA+GGG + chr4.4:31192361-31192380 MS.gene031577:CDS 30.0%
ATATAATGAAGAATTCCCTC+GGG - chr4.4:31190503-31190522 None:intergenic 30.0%
ATCAAAAAAATCGAAGAAGC+TGG + chr4.4:31192412-31192431 MS.gene031577:CDS 30.0%
ATCACACTACGTAATACTTA+AGG - chr4.4:31191635-31191654 None:intergenic 30.0%
ATCGCTGTGATATTTAAAGA+AGG - chr4.4:31191927-31191946 None:intergenic 30.0%
CATCAACTATTGTTGATACA+GGG + chr4.4:31190726-31190745 MS.gene031577:CDS 30.0%
CCCAATTTATTAATCATGGA+GGG + chr4.4:31191510-31191529 MS.gene031577:intron 30.0%
CCCTCCATGATTAATAAATT+GGG - chr4.4:31191513-31191532 None:intergenic 30.0%
CTAAAAGACACCTTCATAAA+AGG + chr4.4:31191823-31191842 MS.gene031577:intron 30.0%
CTTCTATATTAGCAACAAAG+TGG + chr4.4:31190558-31190577 MS.gene031577:CDS 30.0%
GTTGATGCATATATTGATCT+TGG + chr4.4:31191220-31191239 MS.gene031577:CDS 30.0%
TAAGCTCCAAAGATATCATA+TGG + chr4.4:31190448-31190467 MS.gene031577:CDS 30.0%
TAGAAAATGTCACGTTCTTA+AGG + chr4.4:31192360-31192379 MS.gene031577:CDS 30.0%
TATCAGCCATATGATATCTT+TGG - chr4.4:31190457-31190476 None:intergenic 30.0%
TCACACTACGTAATACTTAA+GGG - chr4.4:31191634-31191653 None:intergenic 30.0%
TCGCTGTGATATTTAAAGAA+GGG - chr4.4:31191926-31191945 None:intergenic 30.0%
! CAATGAAGAGCTCTTTTATA+CGG - chr4.4:31190700-31190719 None:intergenic 30.0%
! TGTGATATTTCAGATTTTCG+TGG + chr4.4:31192302-31192321 MS.gene031577:CDS 30.0%
AAAGTGAAAATCACACCTTG+AGG - chr4.4:31191788-31191807 None:intergenic 35.0%
ATGTCCAACTTCTTCAATGT+TGG - chr4.4:31191073-31191092 None:intergenic 35.0%
ATTGCTAAAAGACACCTTCA+TGG - chr4.4:31191760-31191779 None:intergenic 35.0%
CACACTACGTAATACTTAAG+GGG - chr4.4:31191633-31191652 None:intergenic 35.0%
CCATCAACTATTGTTGATAC+AGG + chr4.4:31190725-31190744 MS.gene031577:CDS 35.0%
CCTGTATCAACAATAGTTGA+TGG - chr4.4:31190728-31190747 None:intergenic 35.0%
CTAGGTTAAGTGTAAGATCA+TGG - chr4.4:31190793-31190812 None:intergenic 35.0%
GAAAATCAAAGACGGGTAAT+TGG - chr4.4:31190598-31190617 None:intergenic 35.0%
GAGATGAACATTTACTGTAC+GGG + chr4.4:31192383-31192402 MS.gene031577:CDS 35.0%
GCTATCAGATGAAACTATTC+AGG + chr4.4:31191330-31191349 MS.gene031577:CDS 35.0%
GGAGATGAACATTTACTGTA+CGG + chr4.4:31192382-31192401 MS.gene031577:CDS 35.0%
GTCCTTCGAAAAATGTTACT+GGG + chr4.4:31191021-31191040 MS.gene031577:CDS 35.0%
TACCTTCACAAATGAGAAGT+CGG + chr4.4:31190958-31190977 MS.gene031577:CDS 35.0%
TATCCAACTTAGTCAATGAC+CGG - chr4.4:31190862-31190881 None:intergenic 35.0%
TATTCTTTCTCGTCTCTCTA+CGG + chr4.4:31190520-31190539 MS.gene031577:CDS 35.0%
TCTGCTAATACTTCACAACT+AGG - chr4.4:31192059-31192078 None:intergenic 35.0%
TGTCCTTCGAAAAATGTTAC+TGG + chr4.4:31191020-31191039 MS.gene031577:CDS 35.0%
TTAGGGATCTTACTTATCCT+TGG + chr4.4:31192220-31192239 MS.gene031577:intron 35.0%
TTATTGTTAGCCGTTAAAGG+TGG - chr4.4:31192162-31192181 None:intergenic 35.0%
TTGCTAAAAGACACCTTCAT+GGG - chr4.4:31191839-31191820 None:intergenic 35.0%
! AGAGAAGATTTGAAACAGCA+AGG - chr4.4:31192275-31192294 None:intergenic 35.0%
! CAACATGCAGTTCGTTATTT+TGG - chr4.4:31191258-31191277 None:intergenic 35.0%
! CTAGAAGACACCTTTTATGA+AGG - chr4.4:31191898-31191917 None:intergenic 35.0%
! TTTTCTTCTGCCACCTTTAA+CGG + chr4.4:31192149-31192168 MS.gene031577:intron 35.0%
AAAGGTGGCAGAAGAAAATC+TGG - chr4.4:31192147-31192166 None:intergenic 40.0%
AAGGACAACTCTTGTAAGAC+AGG - chr4.4:31191007-31191026 None:intergenic 40.0%
AGATGAAGCCGAAATCAGAT+TGG + chr4.4:31192325-31192344 MS.gene031577:CDS 40.0%
AGGAACCAATTGCAAGCTTT+AGG + chr4.4:31192443-31192462 MS.gene031577:CDS 40.0%
AGGACAACTCTTGTAAGACA+GGG - chr4.4:31191006-31191025 None:intergenic 40.0%
ATCCAACTTAGTCAATGACC+GGG - chr4.4:31190861-31190880 None:intergenic 40.0%
ATGATTAGCGATTTACCCGA+GGG + chr4.4:31190485-31190504 MS.gene031577:CDS 40.0%
CAACAAAGTGGAGATACTTG+TGG + chr4.4:31190570-31190589 MS.gene031577:CDS 40.0%
CGTAGTTAAGACACTAGCAA+GGG - chr4.4:31191968-31191987 None:intergenic 40.0%
CGTGTTACCCAATAGTTTCT+CGG + chr4.4:31190832-31190851 MS.gene031577:CDS 40.0%
CTATGGAGGTAGAGTTAACA+AGG - chr4.4:31191201-31191220 None:intergenic 40.0%
GGATCTTACTTATCCTTGGA+TGG + chr4.4:31192224-31192243 MS.gene031577:CDS 40.0%
GGTGACTTAGAATTTCGCTT+TGG - chr4.4:31190632-31190651 None:intergenic 40.0%
GGTTGGATTTGTGAAGTAGT+TGG - chr4.4:31190679-31190698 None:intergenic 40.0%
TACCATCAGGTACAGAATCA+AGG - chr4.4:31190898-31190917 None:intergenic 40.0%
TATGATTAGCGATTTACCCG+AGG + chr4.4:31190484-31190503 MS.gene031577:CDS 40.0%
TGCGTCAAATTCTTGAACGA+AGG - chr4.4:31192014-31192033 None:intergenic 40.0%
TTCCTTGATTCTGTACCTGA+TGG + chr4.4:31190893-31190912 MS.gene031577:CDS 40.0%
! GAAGAGCTCTTTTATACGGT+TGG - chr4.4:31190696-31190715 None:intergenic 40.0%
! TTTTAGCAATCCACACCTCA+AGG + chr4.4:31191770-31191789 MS.gene031577:intron 40.0%
!! CAATTGCAAGCTTTAGGCAT+GGG + chr4.4:31192449-31192468 MS.gene031577:CDS 40.0%
!! CACCCAGTAACATTTTTCGA+AGG - chr4.4:31191026-31191045 None:intergenic 40.0%
!!! CGGCTCAAAGACTTTTTTCT+GGG + chr4.4:31190978-31190997 MS.gene031577:CDS 40.0%
!!! TCGGCTCAAAGACTTTTTTC+TGG + chr4.4:31190977-31190996 MS.gene031577:CDS 40.0%
ACTAGATCTACGAGGCAATC+TGG - chr4.4:31190653-31190672 None:intergenic 45.0%
AGATTGCCTCGTAGATCTAG+TGG + chr4.4:31190652-31190671 MS.gene031577:CDS 45.0%
ATTGAGCTGTTCAGTCGTCT+TGG + chr4.4:31191289-31191308 MS.gene031577:CDS 45.0%
CCATGCCTAAAGCTTGCAAT+TGG - chr4.4:31192451-31192470 None:intergenic 45.0%
CTAAAAGACACCTTCATGGG+TGG - chr4.4:31191756-31191775 None:intergenic 45.0%
CTAGGGAAACAGATACCATC+AGG - chr4.4:31190911-31190930 None:intergenic 45.0%
GAAAATCACACCTTGAGGTG+TGG - chr4.4:31191783-31191802 None:intergenic 45.0%
GCGTAGTTAAGACACTAGCA+AGG - chr4.4:31191969-31191988 None:intergenic 45.0%
TATCCTTGGATGGTGAAGAC+TGG + chr4.4:31192234-31192253 MS.gene031577:CDS 45.0%
! AGCCGACTTCTCATTTGTGA+AGG - chr4.4:31190963-31190982 None:intergenic 45.0%
! ATCCCGGTCATTGACTAAGT+TGG + chr4.4:31190856-31190875 MS.gene031577:CDS 45.0%
!! CCAATTGCAAGCTTTAGGCA+TGG + chr4.4:31192448-31192467 MS.gene031577:CDS 45.0%
!! TCATTAACTTGCGTCACTCG+TGG + chr4.4:31192480-31192499 MS.gene031577:CDS 45.0%
CCAATAGTTTCTCGGCATCC+CGG + chr4.4:31190840-31190859 MS.gene031577:CDS 50.0%
CGGGATGCCGAGAAACTATT+GGG - chr4.4:31190842-31190861 None:intergenic 50.0%
GTTGGTCCACTAGATCTACG+AGG - chr4.4:31190661-31190680 None:intergenic 50.0%
TGTCCAGTCTTCACCATCCA+AGG - chr4.4:31192240-31192259 None:intergenic 50.0%
TTCTCGTCTCTCTACGGAAG+AGG + chr4.4:31190526-31190545 MS.gene031577:CDS 50.0%
TTGCTAGAAGCCACCCATGA+AGG + chr4.4:31191743-31191762 MS.gene031577:intron 50.0%
!! TTGGTAGTGTCGAGTCTCTC+AGG + chr4.4:31191308-31191327 MS.gene031577:CDS 50.0%
CCGGGATGCCGAGAAACTAT+TGG - chr4.4:31190843-31190862 None:intergenic 55.0%
CGAAGAAGCTGGCTGATGTG+AGG + chr4.4:31192423-31192442 MS.gene031577:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 31190416 31192508 31190416 ID=MS.gene031577
chr4.4 mRNA 31190416 31192508 31190416 ID=MS.gene031577.t1;Parent=MS.gene031577
chr4.4 exon 31190416 31191351 31190416 ID=MS.gene031577.t1.exon1;Parent=MS.gene031577.t1
chr4.4 CDS 31190416 31191351 31190416 ID=cds.MS.gene031577.t1;Parent=MS.gene031577.t1
chr4.4 exon 31191975 31192124 31191975 ID=MS.gene031577.t1.exon2;Parent=MS.gene031577.t1
chr4.4 CDS 31191975 31192124 31191975 ID=cds.MS.gene031577.t1;Parent=MS.gene031577.t1
chr4.4 exon 31192224 31192508 31192224 ID=MS.gene031577.t1.exon3;Parent=MS.gene031577.t1
chr4.4 CDS 31192224 31192508 31192224 ID=cds.MS.gene031577.t1;Parent=MS.gene031577.t1
Gene Sequence

>MS.gene031577

ATGGCTTCTACAATCTCATCATCAAATTCACATAAGCTCCAAAGATATCATATGGCTGATATGAAAGATATGATTAGCGATTTACCCGAGGGAATTCTTCATTATATTCTTTCTCGTCTCTCTACGGAAGAGGCTGTAAGAACTTCTATATTAGCAACAAAGTGGAGATACTTGTGGACCCAATTACCCGTCTTTGATTTTCGAGATTTATCTCCAAAGCGAAATTCTAAGTCACCAGATTGCCTCGTAGATCTAGTGGACCAACTACTTCACAAATCCAACCGTATAAAAGAGCTCTTCATTGAATTACCATCAACTATTGTTGATACAGGGAAAGTTACTTCAATGTTATCTTCTGCATTGATGCATGATGTCCATGATCTTACACTTAACCTAGAATCTAAAAATAGTAGGTTCGTGTTACCCAATAGTTTCTCGGCATCCCGGTCATTGACTAAGTTGGATATAGTATTTGGCTTCCTTGATTCTGTACCTGATGGTATCTGTTTCCCTAGCTTGAAGATATTATCTTTTGCACATCTTACCTTCACAAATGAGAAGTCGGCTCAAAGACTTTTTTCTGGGTGCCCTGTCTTACAAGAGTTGTCCTTCGAAAAATGTTACTGGGTGAACATAAACATTAGTGTTGCAATTCCAACATTGAAGAAGTTGGACATCTTTTTCAGATCTTCTAGTCTAGATCGTAACAGTTGTATGTTCGAAATTGATGCCGTGAATCTTTCATCTTTAAGTTACAAAAGTAACCCAACTATAAATTGTTTCCTTGTTAACTCTACCTCCATAGTTGATGCATATATTGATCTTGGGTTTTTCTGTGTCCAAAATAACGAACTGCATGTTGCTATATTTGCAATTGAGCTGTTCAGTCGTCTTGGTAGTGTCGAGTCTCTCAGGCTATCAGATGAAACTATTCAGGTATGTTTGAATGTTTACTTATTGTCTTCATTAATATAATATAAATATTGTACTCCTTTGTAATGAAATATAAGCAAATCTTAACCACTTCGATCTTATTTAACAATAGTATCTCTATATTACCCCTCATTTAATTTAACTTTTTATATTTTCAATGACCCAATTTATTAATCATGGAGGGTAGTTTAGACAACAGACTTGATTTTTTTTTTTTTATTGGATTGCATCACTTAAATTTGATCAATTACATTTCTTAATAGGCTTAATAACAGTTTTGACCCCTTAAGTATTACGTAGTGTGATCAATTTATGTTTATAATTTATAGATAATGTCTATTGTAAATGTTGATTAGTCATGTCCTTATATTATTTGCATATTCTTTAAAGGGTTTTGCTAGAAGCCACCCATGAAGGTGTCTTTTAGCAATCCACACCTCAAGGTGTGATTTTCACTTTTTAGTTATAACTTTGCTAAAAGACACCTTCATAAAAATTAGTTGGTGTCTTTTAGCAAATGCTCATAGAATAACTTGCTAAAAGACACCTTCATAAAAGGTGTCTTCTAGCAAAACCCTTCTTTAAATATCACAGCGATCTTGACTTGTTTTTGTTTCCCTTGCTAGTGTCTTAACTACGCAAAATCTGCTCTTCATCTTTTACCTTCGTTCAAGAATTTGACGCATCTTGAAGTGCATTTCGACGATCCTAGTTGTGAAGTATTAGCAGACATTCTCCGAAAGAGTCCTAAACTAAAATTTCTTGACATTTATGGGGTACATCTTGTATCTTGCTCCAGATTTTCTTCTGCCACCTTTAACGGCTAACAATAATTTTATCTCAGTCTATTGACTTGTGTATTGATTCTTGTTTAGGGATCTTACTTATCCTTGGATGGTGAAGACTGGACATCAGATTCATTGCCTTGCTGTTTCAAATCTTCTCTCAAATCATGTGATATTTCAGATTTTCGTGGAGATGAAGCCGAAATCAGATTGGTGAAGTTTTTGTTAGAAAATGTCACGTTCTTAAGGGAGATGAACATTTACTGTACGGGATATCTATCAAAAAAATCGAAGAAGCTGGCTGATGTGAGGAACCAATTGCAAGCTTTAGGCATGGGAAGTTGTGTCATTAACTTGCGTCACTCGTGGTTTTGA

Protein sequence

>MS.gene031577.t1

MASTISSSNSHKLQRYHMADMKDMISDLPEGILHYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDLSPKRNSKSPDCLVDLVDQLLHKSNRIKELFIELPSTIVDTGKVTSMLSSALMHDVHDLTLNLESKNSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHLTFTNEKSAQRLFSGCPVLQELSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSCMFEIDAVNLSSLSYKSNPTINCFLVNSTSIVDAYIDLGFFCVQNNELHVAIFAIELFSRLGSVESLRLSDETIQCLNYAKSALHLLPSFKNLTHLEVHFDDPSCEVLADILRKSPKLKFLDIYGGSYLSLDGEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTFLREMNIYCTGYLSKKSKKLADVRNQLQALGMGSCVINLRHSWF