AlfalfaGEDB | MS.gene035630

M. sativa cultivar XinJiangDaYe / MS.gene035630

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035630.t1	AES92452.1	60.1	348	20	2	1	264	1	313	8.30E-97	363.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035630.t1	Q6NKX3	29.0	162	106	5	11	167	3	160	3.1e-07	57.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035630.t1	G7JFG9	60.1	348	20	2	1	264	1	313	6.0e-97	363.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene035630	MS.gene053311	PPI
MS.gene75902	MS.gene035630	PPI
MS.gene63185	MS.gene035630	PPI
MS.gene035630	MS.gene63105	PPI
MS.gene22129	MS.gene035630	PPI
MS.gene63260	MS.gene035630	PPI
MS.gene038427	MS.gene035630	PPI
MS.gene035630	MS.gene022917	PPI
MS.gene032853	MS.gene035630	PPI
MS.gene25299	MS.gene035630	PPI
MS.gene035630	MS.gene63259	PPI
MS.gene03750	MS.gene035630	PPI
MS.gene059409	MS.gene035630	PPI
MS.gene36752	MS.gene035630	PPI
MS.gene39747	MS.gene035630	PPI
MS.gene91884	MS.gene035630	PPI
MS.gene32300	MS.gene035630	PPI
MS.gene03759	MS.gene035630	PPI
MS.gene67920	MS.gene035630	PPI
MS.gene035630	MS.gene90825	PPI
MS.gene003456	MS.gene035630	PPI
MS.gene64992	MS.gene035630	PPI
MS.gene040413	MS.gene035630	PPI
MS.gene98001	MS.gene035630	PPI
MS.gene63210	MS.gene035630	PPI
MS.gene035630	MS.gene007876	PPI
MS.gene72960	MS.gene035630	PPI
MS.gene89956	MS.gene035630	PPI
MS.gene045452	MS.gene035630	PPI
MS.gene035630	MS.gene045451	PPI
MS.gene035630	MS.gene34737	PPI
MS.gene47783	MS.gene035630	PPI
MS.gene035630	MS.gene91201	PPI
MS.gene035630	MS.gene005798	PPI
MS.gene045441	MS.gene035630	PPI
MS.gene050744	MS.gene035630	PPI
MS.gene30067	MS.gene035630	PPI
MS.gene91885	MS.gene035630	PPI
MS.gene035630	MS.gene25348	PPI
MS.gene035630	MS.gene36065	PPI
MS.gene035630	MS.gene031575	PPI
MS.gene006692	MS.gene035630	PPI
MS.gene035630	MS.gene47772	PPI
MS.gene035630	MS.gene53646	PPI
MS.gene01653	MS.gene035630	PPI
MS.gene002093	MS.gene035630	PPI
MS.gene34739	MS.gene035630	PPI
MS.gene035630	MS.gene09371	PPI
MS.gene022915	MS.gene035630	PPI
MS.gene36764	MS.gene035630	PPI
MS.gene36942	MS.gene035630	PPI
MS.gene035630	MS.gene21682	PPI
MS.gene29863	MS.gene035630	PPI
MS.gene053312	MS.gene035630	PPI
MS.gene035630	MS.gene017193	PPI
MS.gene25344	MS.gene035630	PPI
MS.gene035630	MS.gene95710	PPI
MS.gene010958	MS.gene035630	PPI
MS.gene035630	MS.gene25386	PPI
MS.gene035630	MS.gene63221	PPI
MS.gene035630	MS.gene25450	PPI
MS.gene061286	MS.gene035630	PPI
MS.gene065234	MS.gene035630	PPI
MS.gene79176	MS.gene035630	PPI
MS.gene47780	MS.gene035630	PPI
MS.gene035630	MS.gene29498	PPI
MS.gene34753	MS.gene035630	PPI
MS.gene67919	MS.gene035630	PPI
MS.gene035630	MS.gene49015	PPI
MS.gene09370	MS.gene035630	PPI
MS.gene61631	MS.gene035630	PPI
MS.gene035630	MS.gene045449	PPI
MS.gene34216	MS.gene035630	PPI
MS.gene72954	MS.gene035630	PPI
MS.gene021295	MS.gene035630	PPI
MS.gene39752	MS.gene035630	PPI
MS.gene035630	MS.gene50153	PPI
MS.gene035630	MS.gene64988	PPI
MS.gene049943	MS.gene035630	PPI
MS.gene022909	MS.gene035630	PPI
MS.gene36763	MS.gene035630	PPI
MS.gene006730	MS.gene035630	PPI
MS.gene035630	MS.gene056133	PPI
MS.gene035630	MS.gene07659	PPI
MS.gene27665	MS.gene035630	PPI
MS.gene035630	MS.gene022920	PPI
MS.gene072946	MS.gene035630	PPI
MS.gene035630	MS.gene055877	PPI
MS.gene36804	MS.gene035630	PPI
MS.gene69561	MS.gene035630	PPI
MS.gene47782	MS.gene035630	PPI
MS.gene055882	MS.gene035630	PPI
MS.gene035630	MS.gene36809	PPI
MS.gene29498	MS.gene035630	PPI
MS.gene03752	MS.gene035630	PPI
MS.gene63224	MS.gene035630	PPI
MS.gene005794	MS.gene035630	PPI
MS.gene91886	MS.gene035630	PPI
MS.gene045448	MS.gene035630	PPI
MS.gene035630	MS.gene045448	PPI
MS.gene035630	MS.gene03758	PPI
MS.gene84247	MS.gene035630	PPI
MS.gene035630	MS.gene07658	PPI
MS.gene78146	MS.gene035630	PPI
MS.gene032852	MS.gene035630	PPI
MS.gene99983	MS.gene035630	PPI
MS.gene069762	MS.gene035630	PPI
MS.gene035630	MS.gene003456	PPI
MS.gene035630	MS.gene07666	PPI
MS.gene072000	MS.gene035630	PPI
MS.gene035630	MS.gene36943	PPI
MS.gene035630	MS.gene88183	PPI
MS.gene47775	MS.gene035630	PPI
MS.gene49513	MS.gene035630	PPI
MS.gene69850	MS.gene035630	PPI
MS.gene72957	MS.gene035630	PPI
MS.gene03749	MS.gene035630	PPI
MS.gene035630	MS.gene005799	PPI
MS.gene032379	MS.gene035630	PPI
MS.gene059408	MS.gene035630	PPI
MS.gene035630	MS.gene25298	PPI
MS.gene035630	MS.gene25448	PPI
MS.gene035630	MS.gene03759	PPI
MS.gene064211	MS.gene035630	PPI
MS.gene63257	MS.gene035630	PPI
MS.gene035630	MS.gene03748	PPI
MS.gene060769	MS.gene035630	PPI
MS.gene78164	MS.gene035630	PPI
MS.gene63214	MS.gene035630	PPI
MS.gene045440	MS.gene035630	PPI
MS.gene035630	MS.gene09996	PPI
MS.gene032862	MS.gene035630	PPI
MS.gene035630	MS.gene98324	PPI
MS.gene63217	MS.gene035630	PPI
MS.gene035630	MS.gene34740	PPI
MS.gene005795	MS.gene035630	PPI
MS.gene07668	MS.gene035630	PPI
MS.gene050239	MS.gene035630	PPI
MS.gene006736	MS.gene035630	PPI
MS.gene032296	MS.gene035630	PPI
MS.gene62747	MS.gene035630	PPI
MS.gene96357	MS.gene035630	PPI
MS.gene26058	MS.gene035630	PPI
MS.gene51793	MS.gene035630	PPI
MS.gene035630	MS.gene92095	PPI
MS.gene68082	MS.gene035630	PPI
MS.gene47777	MS.gene035630	PPI
MS.gene36067	MS.gene035630	PPI
MS.gene89957	MS.gene035630	PPI
MS.gene25297	MS.gene035630	PPI
MS.gene035630	MS.gene84248	PPI
MS.gene035630	MS.gene024262	PPI
MS.gene035630	MS.gene022912	PPI
MS.gene86337	MS.gene035630	PPI
MS.gene035630	MS.gene045452	PPI
MS.gene54960	MS.gene035630	PPI
MS.gene046839	MS.gene035630	PPI
MS.gene49013	MS.gene035630	PPI
MS.gene63177	MS.gene035630	PPI
MS.gene98598	MS.gene035630	PPI
MS.gene033694	MS.gene035630	PPI
MS.gene035630	MS.gene94460	PPI
MS.gene94458	MS.gene035630	PPI
MS.gene035630	MS.gene03760	PPI
MS.gene045437	MS.gene035630	PPI
MS.gene95902	MS.gene035630	PPI
MS.gene060771	MS.gene035630	PPI
MS.gene89076	MS.gene035630	PPI
MS.gene035630	MS.gene062526	PPI
MS.gene73780	MS.gene035630	PPI
MS.gene035630	MS.gene64992	PPI
MS.gene035630	MS.gene060770	PPI
MS.gene49015	MS.gene035630	PPI
MS.gene72955	MS.gene035630	PPI
MS.gene34706	MS.gene035630	PPI
MS.gene47781	MS.gene035630	PPI
MS.gene035630	MS.gene30074	PPI
MS.gene23197	MS.gene035630	PPI
MS.gene98324	MS.gene035630	PPI
MS.gene07669	MS.gene035630	PPI
MS.gene39749	MS.gene035630	PPI
MS.gene035630	MS.gene97346	PPI
MS.gene035630	MS.gene69407	PPI
MS.gene043700	MS.gene035630	PPI
MS.gene21278	MS.gene035630	PPI
MS.gene035630	MS.gene031603	PPI
MS.gene053313	MS.gene035630	PPI
MS.gene99982	MS.gene035630	PPI
MS.gene035630	MS.gene34736	PPI
MS.gene72962	MS.gene035630	PPI
MS.gene36807	MS.gene035630	PPI
MS.gene035630	MS.gene046838	PPI
MS.gene035630	MS.gene47781	PPI
MS.gene25396	MS.gene035630	PPI
MS.gene63111	MS.gene035630	PPI
MS.gene035630	MS.gene63222	PPI
MS.gene23706	MS.gene035630	PPI
MS.gene035630	MS.gene34730	PPI
MS.gene34215	MS.gene035630	PPI
MS.gene035630	MS.gene25418	PPI
MS.gene035630	MS.gene005795	PPI
MS.gene043664	MS.gene035630	PPI
MS.gene30260	MS.gene035630	PPI
MS.gene072003	MS.gene035630	PPI
MS.gene035630	MS.gene032860	PPI
MS.gene035630	MS.gene045772	PPI
MS.gene49018	MS.gene035630	PPI
MS.gene09362	MS.gene035630	PPI
MS.gene035630	MS.gene34733	PPI
MS.gene035630	MS.gene006723	PPI
MS.gene23226	MS.gene035630	PPI
MS.gene36743	MS.gene035630	PPI
MS.gene007794	MS.gene035630	PPI
MS.gene046838	MS.gene035630	PPI
MS.gene035630	MS.gene34825	PPI
MS.gene045451	MS.gene035630	PPI
MS.gene035630	MS.gene25296	PPI
MS.gene035630	MS.gene99980	PPI
MS.gene035630	MS.gene029093	PPI
MS.gene035630	MS.gene25297	PPI
MS.gene25347	MS.gene035630	PPI
MS.gene96923	MS.gene035630	PPI
MS.gene035630	MS.gene25451	PPI
MS.gene64989	MS.gene035630	PPI
MS.gene07678	MS.gene035630	PPI
MS.gene035630	MS.gene043122	PPI
MS.gene065373	MS.gene035630	PPI
MS.gene035630	MS.gene67957	PPI
MS.gene09367	MS.gene035630	PPI
MS.gene041323	MS.gene035630	PPI
MS.gene055883	MS.gene035630	PPI
MS.gene072244	MS.gene035630	PPI
MS.gene072547	MS.gene035630	PPI
MS.gene002112	MS.gene035630	PPI
MS.gene035630	MS.gene52136	PPI
MS.gene031570	MS.gene035630	PPI
MS.gene033897	MS.gene035630	PPI
MS.gene055877	MS.gene035630	PPI
MS.gene035630	MS.gene63256	PPI
MS.gene53647	MS.gene035630	PPI
MS.gene035630	MS.gene72956	PPI
MS.gene035630	MS.gene98323	PPI
MS.gene34738	MS.gene035630	PPI
MS.gene031603	MS.gene035630	PPI
MS.gene72963	MS.gene035630	PPI
MS.gene035630	MS.gene032295	PPI
MS.gene25353	MS.gene035630	PPI
MS.gene035630	MS.gene07664	PPI
MS.gene071257	MS.gene035630	PPI
MS.gene056517	MS.gene035630	PPI
MS.gene34735	MS.gene035630	PPI
MS.gene03755	MS.gene035630	PPI
MS.gene010934	MS.gene035630	PPI
MS.gene035630	MS.gene89955	PPI
MS.gene032861	MS.gene035630	PPI
MS.gene035630	MS.gene074346	PPI
MS.gene09368	MS.gene035630	PPI
MS.gene054411	MS.gene035630	PPI
MS.gene028696	MS.gene035630	PPI
MS.gene34703	MS.gene035630	PPI
MS.gene035630	MS.gene059409	PPI
MS.gene035630	MS.gene007875	PPI
MS.gene25449	MS.gene035630	PPI
MS.gene035630	MS.gene022919	PPI
MS.gene022916	MS.gene035630	PPI
MS.gene035630	MS.gene09363	PPI
MS.gene32305	MS.gene035630	PPI
MS.gene26444	MS.gene035630	PPI
MS.gene34801	MS.gene035630	PPI
MS.gene63095	MS.gene035630	PPI
MS.gene75904	MS.gene035630	PPI
MS.gene63104	MS.gene035630	PPI
MS.gene035630	MS.gene72961	PPI
MS.gene061531	MS.gene035630	PPI
MS.gene055880	MS.gene035630	PPI
MS.gene035630	MS.gene39753	PPI
MS.gene043123	MS.gene035630	PPI
MS.gene25412	MS.gene035630	PPI
MS.gene49011	MS.gene035630	PPI
MS.gene035630	MS.gene002112	PPI
MS.gene035630	MS.gene26444	PPI
MS.gene91201	MS.gene035630	PPI
MS.gene25410	MS.gene035630	PPI
MS.gene035630	MS.gene09997	PPI
MS.gene25348	MS.gene035630	PPI
MS.gene63113	MS.gene035630	PPI
MS.gene34707	MS.gene035630	PPI
MS.gene035630	MS.gene047153	PPI
MS.gene07674	MS.gene035630	PPI
MS.gene035630	MS.gene75903	PPI
MS.gene035630	MS.gene006728	PPI
MS.gene006727	MS.gene035630	PPI
MS.gene006728	MS.gene035630	PPI
MS.gene035630	MS.gene01651	PPI
MS.gene93027	MS.gene035630	PPI
MS.gene63094	MS.gene035630	PPI
MS.gene49017	MS.gene035630	PPI
MS.gene006725	MS.gene035630	PPI
MS.gene32587	MS.gene035630	PPI
MS.gene022905	MS.gene035630	PPI
MS.gene062537	MS.gene035630	PPI
MS.gene60523	MS.gene035630	PPI
MS.gene29873	MS.gene035630	PPI
MS.gene63112	MS.gene035630	PPI
MS.gene023817	MS.gene035630	PPI
MS.gene035630	MS.gene89963	PPI
MS.gene36810	MS.gene035630	PPI
MS.gene34804	MS.gene035630	PPI
MS.gene035630	MS.gene031573	PPI
MS.gene035630	MS.gene60525	PPI
MS.gene035630	MS.gene60521	PPI
MS.gene035630	MS.gene002111	PPI
MS.gene031572	MS.gene035630	PPI
MS.gene39744	MS.gene035630	PPI
MS.gene035630	MS.gene81090	PPI
MS.gene035630	MS.gene050947	PPI
MS.gene73831	MS.gene035630	PPI
MS.gene035630	MS.gene07669	PPI
MS.gene035630	MS.gene89961	PPI
MS.gene48656	MS.gene035630	PPI
MS.gene035630	MS.gene033695	PPI
MS.gene09364	MS.gene035630	PPI
MS.gene035630	MS.gene63218	PPI
MS.gene013991	MS.gene035630	PPI
MS.gene035630	MS.gene07660	PPI
MS.gene035630	MS.gene03749	PPI
MS.gene035630	MS.gene34802	PPI
MS.gene63213	MS.gene035630	PPI
MS.gene066439	MS.gene035630	PPI
MS.gene09360	MS.gene035630	PPI
MS.gene63223	MS.gene035630	PPI
MS.gene041325	MS.gene035630	PPI
MS.gene39754	MS.gene035630	PPI
MS.gene34824	MS.gene035630	PPI
MS.gene64993	MS.gene035630	PPI
MS.gene25411	MS.gene035630	PPI
MS.gene20329	MS.gene035630	PPI
MS.gene033899	MS.gene035630	PPI
MS.gene035630	MS.gene54959	PPI
MS.gene035630	MS.gene047839	PPI
MS.gene035630	MS.gene43257	PPI
MS.gene72959	MS.gene035630	PPI
MS.gene96120	MS.gene035630	PPI
MS.gene035630	MS.gene073176	PPI
MS.gene035630	MS.gene72952	PPI
MS.gene035630	MS.gene51795	PPI
MS.gene25414	MS.gene035630	PPI
MS.gene34731	MS.gene035630	PPI
MS.gene03757	MS.gene035630	PPI
MS.gene062282	MS.gene035630	PPI
MS.gene035630	MS.gene07665	PPI
MS.gene035630	MS.gene050744	PPI
MS.gene047137	MS.gene035630	PPI
MS.gene035630	MS.gene34766	PPI
MS.gene010060	MS.gene035630	PPI
MS.gene54959	MS.gene035630	PPI
MS.gene065516	MS.gene035630	PPI
MS.gene25352	MS.gene035630	PPI
MS.gene34704	MS.gene035630	PPI
MS.gene09992	MS.gene035630	PPI
MS.gene053514	MS.gene035630	PPI
MS.gene94457	MS.gene035630	PPI
MS.gene045439	MS.gene035630	PPI
MS.gene20330	MS.gene035630	PPI
MS.gene25415	MS.gene035630	PPI
MS.gene03756	MS.gene035630	PPI
MS.gene035630	MS.gene09367	PPI
MS.gene035630	MS.gene39747	PPI
MS.gene48654	MS.gene035630	PPI
MS.gene067702	MS.gene035630	PPI
MS.gene035630	MS.gene022921	PPI
MS.gene63212	MS.gene035630	PPI
MS.gene035630	MS.gene30431	PPI
MS.gene36066	MS.gene035630	PPI
MS.gene66626	MS.gene035630	PPI
MS.gene035630	MS.gene03753	PPI
MS.gene035630	MS.gene49012	PPI
MS.gene035630	MS.gene003455	PPI
MS.gene035630	MS.gene47771	PPI
MS.gene07667	MS.gene035630	PPI
MS.gene041326	MS.gene035630	PPI
MS.gene035630	MS.gene072231	PPI
MS.gene043687	MS.gene035630	PPI
MS.gene64984	MS.gene035630	PPI
MS.gene035630	MS.gene031577	PPI
MS.gene72958	MS.gene035630	PPI
MS.gene035630	MS.gene069763	PPI
MS.gene047136	MS.gene035630	PPI
MS.gene010865	MS.gene035630	PPI
MS.gene39745	MS.gene035630	PPI
MS.gene035630	MS.gene09992	PPI
MS.gene061767	MS.gene035630	PPI
MS.gene035630	MS.gene040413	PPI
MS.gene055754	MS.gene035630	PPI
MS.gene045446	MS.gene035630	PPI
MS.gene035630	MS.gene97999	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035630.t1	MTR_4g130200	88.976	127	14	0	138	264	187	313	3.09e-71	224
MS.gene035630.t1	MTR_4g130200	69.286	140	8	1	1	140	1	105	6.82e-53	177
MS.gene035630.t1	MTR_3g048290	56.115	139	56	3	1	135	1	138	1.62e-34	130
MS.gene035630.t1	MTR_3g048290	41.406	128	71	1	142	265	260	387	3.31e-13	69.7
MS.gene035630.t1	MTR_5g039970	55.652	115	49	2	10	124	9	121	5.64e-32	121
MS.gene035630.t1	MTR_7g023330	45.714	140	73	2	1	140	1	137	3.50e-30	117
MS.gene035630.t1	MTR_7g023330	46.903	113	58	1	142	254	199	309	5.03e-19	86.7
MS.gene035630.t1	MTR_4g080590	49.640	139	61	3	1	136	1	133	4.87e-30	116
MS.gene035630.t1	MTR_4g080590	53.571	112	49	2	141	251	251	360	9.95e-23	96.7
MS.gene035630.t1	MTR_4g080590	49.640	139	61	3	1	136	1	133	2.23e-29	116
MS.gene035630.t1	MTR_4g080590	52.419	124	56	2	141	263	251	372	1.24e-25	105
MS.gene035630.t1	MTR_4g080773	49.306	144	61	3	7	139	6	148	2.50e-29	116
MS.gene035630.t1	MTR_4g080773	49.194	124	63	0	142	265	266	389	2.20e-26	108
MS.gene035630.t1	MTR_4g080773	50.000	140	58	3	7	135	6	144	2.69e-29	116
MS.gene035630.t1	MTR_4g080773	49.194	124	63	0	142	265	266	389	2.34e-26	108
MS.gene035630.t1	MTR_4g080787	49.286	140	59	3	7	135	6	144	2.23e-28	114
MS.gene035630.t1	MTR_4g080787	34.081	223	111	8	68	265	175	386	9.97e-21	92.0
MS.gene035630.t1	MTR_5g039950	45.324	139	54	3	1	136	1	120	4.51e-27	109
MS.gene035630.t1	MTR_5g039950	45.600	125	67	1	141	264	217	341	1.21e-23	99.8
MS.gene035630.t1	MTR_7g023310	41.497	147	74	4	1	141	1	141	5.56e-26	106
MS.gene035630.t1	MTR_7g023310	47.273	110	56	1	142	251	260	367	2.72e-13	70.1
MS.gene035630.t1	MTR_7g039630	48.214	112	57	1	141	251	227	338	2.09e-23	98.2
MS.gene035630.t1	MTR_4g080813	65.672	67	20	1	5	68	1	67	6.79e-22	88.2
MS.gene035630.t1	MTR_4g080807	47.619	126	61	3	130	251	116	240	1.17e-21	94.4
MS.gene035630.t1	MTR_4g081030	36.196	163	84	4	6	166	3	147	2.88e-17	81.3
MS.gene035630.t1	MTR_4g081030	40.517	116	64	1	141	251	240	355	1.98e-12	67.0
MS.gene035630.t1	MTR_2g094750	43.810	105	57	2	10	113	80	183	1.87e-16	79.3
MS.gene035630.t1	MTR_2g094750	40.833	120	66	3	134	249	339	457	6.42e-12	65.9
MS.gene035630.t1	MTR_2g082800	31.206	141	88	4	11	149	18	151	2.78e-13	69.7
MS.gene035630.t1	MTR_8g014290	49.153	59	25	1	19	72	9	67	1.58e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 32 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATCTGCTAACTTCAAATTT+TGG	0.166111	8.1:-3165152	None:intergenic
CCCTAGAATTTATAGATTCT+AGG	0.250715	8.1:+3165328	MS.gene035630:CDS
ACCTAGAATCTATAAATTCT+AGG	0.302328	8.1:-3165329	None:intergenic
ACTAACACATAATACTATTC+AGG	0.356633	8.1:+3165860	MS.gene035630:CDS
ATCAATACATGCATCAACTA+TGG	0.366463	8.1:-3165748	None:intergenic
GATAGAAAGGCTCTGCATTA+AGG	0.370933	8.1:+3165218	MS.gene035630:CDS
ATGTGAAGAACTTCCAGTTT+AGG	0.378415	8.1:-3166169	None:intergenic
TCTATGTAAGACTCCTAAAC+TGG	0.395837	8.1:+3166156	MS.gene035630:CDS
CTAGGGAAAGTTTAAGATCA+AGG	0.407527	8.1:-3165311	None:intergenic
TTCGTCAAATTGTTGAATGA+AGG	0.451486	8.1:-3166079	None:intergenic
GATTGCCTCTTCGATCTAGT+TGG	0.468138	8.1:+3165171	MS.gene035630:CDS
CCTAGAATCTATAAATTCTA+GGG	0.498270	8.1:-3165328	None:intergenic
TTAGGGAGATTGCATAGACT+TGG	0.519489	8.1:+3166292	MS.gene035630:intron
GCACAATGAGAAACATATAG+TGG	0.526428	8.1:-3165795	None:intergenic
AAAAGATGACCACAGTTCCT+TGG	0.528129	8.1:-3166055	None:intergenic
ACAAATCTGATCGGATAGAA+AGG	0.542475	8.1:+3165205	MS.gene035630:CDS
CATGCATCAACTATGGAGGT+TGG	0.544111	8.1:-3165741	None:intergenic
AGGCTAGCATAGATCATGGT+TGG	0.551000	8.1:+3164913	None:intergenic
ATATCAAGAAGAACGTCCTC+AGG	0.564920	8.1:-3165003	None:intergenic
GGAAGTTCTTCACATTTCCA+AGG	0.565872	8.1:+3166177	MS.gene035630:CDS
ATATGTTTCTCATTGTGCAA+TGG	0.567231	8.1:+3165800	MS.gene035630:CDS
GACTATTGCACAAATCTGAT+CGG	0.579697	8.1:+3165196	MS.gene035630:CDS
ATGGAGCTATTGAGTGAACT+TGG	0.599700	8.1:+3165819	MS.gene035630:CDS
AGGCTCTGCATTAAGGTGCA+AGG	0.612492	8.1:+3165225	MS.gene035630:CDS
GAATTGATATGTATGATGCA+TGG	0.626104	8.1:+3165247	MS.gene035630:CDS
AGAGAAGATTTGATACAACA+AGG	0.632975	8.1:-3166348	None:intergenic
AATACCCTAAAATCATGTCA+AGG	0.637389	8.1:-3166102	None:intergenic
AATACATGCATCAACTATGG+AGG	0.653836	8.1:-3165745	None:intergenic
GTCTTCCAACTAGATCGAAG+AGG	0.665222	8.1:-3165176	None:intergenic
AGATGTGCAAAGACATAACG+CGG	0.677348	8.1:+3164951	MS.gene035630:CDS
TATGATCAGTGACTTACCTG+AGG	0.732408	8.1:+3164987	MS.gene035630:CDS
GATGTGCAAAGACATAACGC+GGG	0.756677	8.1:+3164952	MS.gene035630:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ACAAGAATATATTTTATAGC+TGG	-	chr8.1:3165717-3165736	None:intergenic	20.0%
!!!	GTATATTGATTCTTGTTTTA+GGG	+	chr8.1:3166275-3166294	MS.gene035630:intron	20.0%
!!!	TGTATATTGATTCTTGTTTT+AGG	+	chr8.1:3166274-3166293	MS.gene035630:intron	20.0%
!	AAATGATGTAAGATATACCT+TGG	-	chr8.1:3166197-3166216	None:intergenic	25.0%
!	AACCCATATGCATTTATATA+AGG	-	chr8.1:3165547-3165566	None:intergenic	25.0%
!	AATAATATTAGTTGTGAGAC+AGG	-	chr8.1:3166237-3166256	None:intergenic	25.0%
!	ACCTAGAATCTATAAATTCT+AGG	-	chr8.1:3165332-3165351	None:intergenic	25.0%
!	ACTAACACATAATACTATTC+AGG	+	chr8.1:3165860-3165879	MS.gene035630:CDS	25.0%
!	AGAATCAATATACAAGTCAA+TGG	-	chr8.1:3166268-3166287	None:intergenic	25.0%
!	AGATATAATGTCTTCAGATT+TGG	-	chr8.1:3165450-3165469	None:intergenic	25.0%
!	CCTAGAATCTATAAATTCTA+GGG	-	chr8.1:3165331-3165350	None:intergenic	25.0%
!	CTAGAAAAGACGATTTAAAA+TGG	-	chr8.1:3165620-3165639	None:intergenic	25.0%
!	GACCTTATATAAATGCATAT+GGG	+	chr8.1:3165542-3165561	MS.gene035630:intron	25.0%
!	GATATAATGTCTTCAGATTT+GGG	-	chr8.1:3165449-3165468	None:intergenic	25.0%
!	TCAATTATGACTATACAACT+TGG	-	chr8.1:3165657-3165676	None:intergenic	25.0%
!	TGACCTTATATAAATGCATA+TGG	+	chr8.1:3165541-3165560	MS.gene035630:intron	25.0%
!!	AAAAGACGATTTAAAATGGA+GGG	-	chr8.1:3165616-3165635	None:intergenic	25.0%
!!	AAATCGTCTTTTCTAGATTA+TGG	+	chr8.1:3165624-3165643	MS.gene035630:intron	25.0%
!!	AATAAGTTGTGTTTAGAATC+TGG	+	chr8.1:3165390-3165409	MS.gene035630:intron	25.0%
!!	AATCTGCTAACTTCAAATTT+TGG	-	chr8.1:3165155-3165174	None:intergenic	25.0%
!!!	AAATTCCTCATTTTTGTGAT+GGG	+	chr8.1:3165121-3165140	MS.gene035630:CDS	25.0%
	AATACCCTAAAATCATGTCA+AGG	-	chr8.1:3166105-3166124	None:intergenic	30.0%
	AGAGAAGATTTGATACAACA+AGG	-	chr8.1:3166351-3166370	None:intergenic	30.0%
	AGTGAGAAGATGAGAAATTA+TGG	-	chr8.1:3165365-3165384	None:intergenic	30.0%
	ATATGTTTCTCATTGTGCAA+TGG	+	chr8.1:3165800-3165819	MS.gene035630:CDS	30.0%
	ATCAATACATGCATCAACTA+TGG	-	chr8.1:3165751-3165770	None:intergenic	30.0%
	CCCTAGAATTTATAGATTCT+AGG	+	chr8.1:3165328-3165347	MS.gene035630:CDS	30.0%
	GAATTGATATGTATGATGCA+TGG	+	chr8.1:3165247-3165266	MS.gene035630:CDS	30.0%
	GTGAGAAGATGAGAAATTAT+GGG	-	chr8.1:3165364-3165383	None:intergenic	30.0%
	GTTCATATGTTTATACCTGA+TGG	+	chr8.1:3165414-3165433	MS.gene035630:intron	30.0%
	TATATAAGGTCAACTCTTCA+AGG	-	chr8.1:3165533-3165552	None:intergenic	30.0%
	TGACTATACAACTTGGAAAA+TGG	-	chr8.1:3165650-3165669	None:intergenic	30.0%
	TGAGAAGATGAGAAATTATG+GGG	-	chr8.1:3165363-3165382	None:intergenic	30.0%
	TTCCTTCAATAATGAGATGT+CGG	+	chr8.1:3165479-3165498	MS.gene035630:intron	30.0%
	TTCGTCAAATTGTTGAATGA+AGG	-	chr8.1:3166082-3166101	None:intergenic	30.0%
!	AGAAAAACGCTGGTTAATTA+AGG	-	chr8.1:3166032-3166051	None:intergenic	30.0%
!	GAAAAGACGATTTAAAATGG+AGG	-	chr8.1:3165617-3165636	None:intergenic	30.0%
!!	CAAATTCCTCATTTTTGTGA+TGG	+	chr8.1:3165120-3165139	MS.gene035630:CDS	30.0%
!!	TGCCAATATGGATGTTTTTA+CGG	-	chr8.1:3165055-3165074	None:intergenic	30.0%
!!!	ATATAGTGGATTTTCAGGAT+AGG	-	chr8.1:3165784-3165803	None:intergenic	30.0%
!!!	GAAACATATAGTGGATTTTC+AGG	-	chr8.1:3165789-3165808	None:intergenic	30.0%
	AATACATGCATCAACTATGG+AGG	-	chr8.1:3165748-3165767	None:intergenic	35.0%
	ACAAATCTGATCGGATAGAA+AGG	+	chr8.1:3165205-3165224	MS.gene035630:CDS	35.0%
	ATGTGAAGAACTTCCAGTTT+AGG	-	chr8.1:3166172-3166191	None:intergenic	35.0%
	CATCCATATTGGCAAAAAAG+TGG	+	chr8.1:3165061-3165080	MS.gene035630:CDS	35.0%
	GACTATTGCACAAATCTGAT+CGG	+	chr8.1:3165196-3165215	MS.gene035630:CDS	35.0%
	GCACAATGAGAAACATATAG+TGG	-	chr8.1:3165798-3165817	None:intergenic	35.0%
	GTGTTGCAATTTCCACATTA+AGG	+	chr8.1:3165583-3165602	MS.gene035630:intron	35.0%
	TCTATGTAAGACTCCTAAAC+TGG	+	chr8.1:3166156-3166175	MS.gene035630:CDS	35.0%
	TGCCGTAAAAACATCCATAT+TGG	+	chr8.1:3165050-3165069	MS.gene035630:CDS	35.0%
	TGTAACCCATCACAAAAATG+AGG	-	chr8.1:3165129-3165148	None:intergenic	35.0%
!	ACGAACCTTGACATGATTTT+AGG	+	chr8.1:3166097-3166116	MS.gene035630:CDS	35.0%
!	CGAACCTTGACATGATTTTA+GGG	+	chr8.1:3166098-3166117	MS.gene035630:CDS	35.0%
!	CTAGGGAAAGTTTAAGATCA+AGG	-	chr8.1:3165314-3165333	None:intergenic	35.0%
!	TTTTCTTATCCAAGGAACTG+TGG	+	chr8.1:3166046-3166065	MS.gene035630:CDS	35.0%
!	TTTTTACGGCATCTTTGGTA+GGG	-	chr8.1:3165041-3165060	None:intergenic	35.0%
	AAAAGATGACCACAGTTCCT+TGG	-	chr8.1:3166058-3166077	None:intergenic	40.0%
	AAGGTCAACTCTTCAAGGAT+AGG	-	chr8.1:3165528-3165547	None:intergenic	40.0%
	AGATGTGCAAAGACATAACG+CGG	+	chr8.1:3164951-3164970	MS.gene035630:CDS	40.0%
	AGGTCAACTCTTCAAGGATA+GGG	-	chr8.1:3165527-3165546	None:intergenic	40.0%
	ATATCAAGAAGAACGTCCTC+AGG	-	chr8.1:3165006-3165025	None:intergenic	40.0%
	ATGGAGCTATTGAGTGAACT+TGG	+	chr8.1:3165819-3165838	MS.gene035630:CDS	40.0%
	CCATATTGGCAAAAAAGTGG+AGG	+	chr8.1:3165064-3165083	MS.gene035630:CDS	40.0%
	GAGGGTTAACTTCCTTAATG+TGG	-	chr8.1:3165598-3165617	None:intergenic	40.0%
	GATAGAAAGGCTCTGCATTA+AGG	+	chr8.1:3165218-3165237	MS.gene035630:CDS	40.0%
	GGAAGTTCTTCACATTTCCA+AGG	+	chr8.1:3166177-3166196	MS.gene035630:CDS	40.0%
	TATGATCAGTGACTTACCTG+AGG	+	chr8.1:3164987-3165006	MS.gene035630:CDS	40.0%
	TCCTTGGATAAGAAAAACGC+TGG	-	chr8.1:3166042-3166061	None:intergenic	40.0%
	TTAGGGAGATTGCATAGACT+TGG	+	chr8.1:3166292-3166311	MS.gene035630:intron	40.0%
	TTTGGGAAGCAAATACCATC+AGG	-	chr8.1:3165432-3165451	None:intergenic	40.0%
!	ACCAGCGTTTTTCTTATCCA+AGG	+	chr8.1:3166038-3166057	MS.gene035630:intron	40.0%
!	GTTTTTACGGCATCTTTGGT+AGG	-	chr8.1:3165042-3165061	None:intergenic	40.0%
!!	GGATGTTTTTACGGCATCTT+TGG	-	chr8.1:3165046-3165065	None:intergenic	40.0%
!!!	CCTCCACTTTTTTGCCAATA+TGG	-	chr8.1:3165067-3165086	None:intergenic	40.0%
	CATGCATCAACTATGGAGGT+TGG	-	chr8.1:3165744-3165763	None:intergenic	45.0%
	GATGTGCAAAGACATAACGC+GGG	+	chr8.1:3164952-3164971	MS.gene035630:CDS	45.0%
	GATTGCCTCTTCGATCTAGT+TGG	+	chr8.1:3165171-3165190	MS.gene035630:CDS	45.0%
	GGCCGACATCTCATTATTGA+AGG	-	chr8.1:3165484-3165503	None:intergenic	45.0%
	GTCTTCCAACTAGATCGAAG+AGG	-	chr8.1:3165179-3165198	None:intergenic	45.0%
!!	CAAAAAAGTGGAGGCACTTG+TGG	+	chr8.1:3165073-3165092	MS.gene035630:CDS	45.0%
	AGGCTCTGCATTAAGGTGCA+AGG	+	chr8.1:3165225-3165244	MS.gene035630:CDS	50.0%
	GCACCCAGAGAGAAGTCGTT+GGG	-	chr8.1:3165505-3165524	None:intergenic	55.0%
	CGGCCCAACGACTTCTCTCT+GGG	+	chr8.1:3165499-3165518	MS.gene035630:intron	60.0%
	GGCACCCAGAGAGAAGTCGT+TGG	-	chr8.1:3165506-3165525	None:intergenic	60.0%
	TCGGCCCAACGACTTCTCTC+TGG	+	chr8.1:3165498-3165517	MS.gene035630:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	3164928	3166397	3164928	ID=MS.gene035630
chr8.1	mRNA	3164928	3166397	3164928	ID=MS.gene035630.t1;Parent=MS.gene035630
chr8.1	exon	3164928	3165349	3164928	ID=MS.gene035630.t1.exon1;Parent=MS.gene035630.t1
chr8.1	CDS	3164928	3165349	3164928	ID=cds.MS.gene035630.t1;Parent=MS.gene035630.t1
chr8.1	exon	3165701	3165881	3165701	ID=MS.gene035630.t1.exon2;Parent=MS.gene035630.t1
chr8.1	CDS	3165701	3165881	3165701	ID=cds.MS.gene035630.t1;Parent=MS.gene035630.t1
chr8.1	exon	3166043	3166198	3166043	ID=MS.gene035630.t1.exon3;Parent=MS.gene035630.t1
chr8.1	CDS	3166043	3166198	3166043	ID=cds.MS.gene035630.t1;Parent=MS.gene035630.t1
chr8.1	exon	3166296	3166397	3166296	ID=MS.gene035630.t1.exon4;Parent=MS.gene035630.t1
chr8.1	CDS	3166296	3166397	3166296	ID=cds.MS.gene035630.t1;Parent=MS.gene035630.t1

Gene Sequence

>MS.gene035630

ATGGTTGGTGCAATCTCATCAACAGATGTGCAAAGACATAACGCGGGTAACATGAATGATATGATCAGTGACTTACCTGAGGACGTTCTTCTTGATATTCATTCTTTAGTCCCTACCAAAGATGCCGTAAAAACATCCATATTGGCAAAAAAGTGGAGGCACTTGTGGACTCATCTACGCTTCTTTGATTTTCAAATTCCTCATTTTTGTGATGGGTTACATCACCAAAATTTGAAGTTAGCAGATTGCCTCTTCGATCTAGTTGGAAGACTATTGCACAAATCTGATCGGATAGAAAGGCTCTGCATTAAGGTGCAAGGAATTGATATGTATGATGCATGGAAAGTTAATCTTTTGTTATCTTATGCACTGAAGCACAAAGTCCTTGATCTTAAACTTTCCCTAGAATTTATAGATTCTAGGTTTGAGTTACCCCATAATTTCTCATCTTCTCACTCATTGAATAAGTTGTGTTTAGAATCTGGCGTTCATATGTTTATACCTGATGGTATTTGCTTCCCAAATCTGAAGACATTATATCTTTCACGTCTTTCCTTCAATAATGAGATGTCGGCCCAACGACTTCTCTCTGGGTGCCCTATCCTTGAAGAGTTGACCTTATATAAATGCATATGGGTTAACATAAATCAAATATGTGTTGCAATTTCCACATTAAGGAAGTTAACCCTCCATTTTAAATCGTCTTTTCTAGATTATGGCCATTTTCCAAGTTGTATAGTCATAATTGATGCTGTGAATCTTTTGTCTTTAAGTTGCACGAGCAATCCAGCTATAAAATATATTCTTGTTAAACCAACCTCCATAGTTGATGCATGTATTGATCTTAAGTTTTCCTATCCTGAAAATCCACTATATGTTTCTCATTGTGCAATGGAGCTATTGAGTGAACTTGGTAGTGTCAAGTCTCTCAAACTAACACATAATACTATTCAGGTATGTTTGAATATTTACTTATCATCTTCTTTTTTTTTTTTTTAAATATGTATAAGAAAATGACTATTCACAATGTTGTCTCAGTTATGTGCTTCTTTATTCGTTGCATGTTTTTTATATGTCACAATAATGAATCTATTTTTGTTTCCTTAATTAACCAGCGTTTTTCTTATCCAAGGAACTGTGGTCATCTTTTGCCTTCATTCAACAATTTGACGAACCTTGACATGATTTTAGGGTATTGTTATGTTAGCTGTGAACTATTAGTAGACATTCTATGTAAGACTCCTAAACTGGAAGTTCTTCACATTTCCAAGGTATATCTTACATCATTTCTTCTATTTTGTTATGTCCTGTCTCACAACTAATATTATTATTTCTTTCCATTGACTTGTATATTGATTCTTGTTTTAGGGAGATTGCATAGACTTGGACAATGAAGACGTACTTGACATCAGATTCTTTGCCTTGTTGTATCAAATCTTCTCTCAAATTATGTTCTTTTTCAGATTTTGA

Protein sequence

>MS.gene035630.t1

MVGAISSTDVQRHNAGNMNDMISDLPEDVLLDIHSLVPTKDAVKTSILAKKWRHLWTHLRFFDFQIPHFCDGLHHQNLKLADCLFDLVGRLLHKSDRIERLCIKVQGIDMYDAWKVNLLLSYALKHKVLDLKLSLEFIDSSCTSNPAIKYILVKPTSIVDACIDLKFSYPENPLYVSHCAMELLSELGSVKSLKLTHNTIQRFSYPRNCGHLLPSFNNLTNLDMILGYCYVSCELLVDILCKTPKLEVLHISKGDCIDLDNEDVLDIRFFALLYQIFSQIMFFFRF