AlfalfaGEDB | MS.gene032853

M. sativa cultivar XinJiangDaYe / MS.gene032853

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF00646.36

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene032853.t1	RHN55343.1	61.4	368	36	1	5	266	1	368	1.50E-108	402.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene032853.t1	Q9LXR6	29.9	164	102	6	23	178	7	165	3.3e-11	70.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene032853.t1	A0A396HS78	61.4	368	36	1	5	266	1	368	1.1e-108	402.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene32305	MS.gene032853	PPI
MS.gene34801	MS.gene032853	PPI
MS.gene63095	MS.gene032853	PPI
MS.gene032853	MS.gene022921	PPI
MS.gene72955	MS.gene032853	PPI
MS.gene75904	MS.gene032853	PPI
MS.gene032853	MS.gene30431	PPI
MS.gene63104	MS.gene032853	PPI
MS.gene061531	MS.gene032853	PPI
MS.gene032853	MS.gene49012	PPI
MS.gene032853	MS.gene003455	PPI
MS.gene032853	MS.gene47771	PPI
MS.gene043123	MS.gene032853	PPI
MS.gene032853	MS.gene043687	PPI
MS.gene032853	MS.gene035630	PPI
MS.gene032853	MS.gene072231	PPI
MS.gene032853	MS.gene002093	PPI
MS.gene032853	MS.gene013991	PPI
MS.gene032853	MS.gene031577	PPI
MS.gene63113	MS.gene032853	PPI
MS.gene34707	MS.gene032853	PPI
MS.gene032853	MS.gene069763	PPI
MS.gene07674	MS.gene032853	PPI
MS.gene032853	MS.gene09992	PPI
MS.gene032853	MS.gene97999	PPI
MS.gene93027	MS.gene032853	PPI
MS.gene032853	MS.gene053311	PPI
MS.gene49017	MS.gene032853	PPI
MS.gene032853	MS.gene25299	PPI
MS.gene34215	MS.gene032853	PPI
MS.gene32587	MS.gene032853	PPI
MS.gene022905	MS.gene032853	PPI
MS.gene30260	MS.gene032853	PPI
MS.gene023817	MS.gene032853	PPI
MS.gene032853	MS.gene022917	PPI
MS.gene36810	MS.gene032853	PPI
MS.gene34804	MS.gene032853	PPI
MS.gene032853	MS.gene36807	PPI
MS.gene09362	MS.gene032853	PPI
MS.gene36743	MS.gene032853	PPI
MS.gene032853	MS.gene63259	PPI
MS.gene007794	MS.gene032853	PPI
MS.gene39744	MS.gene032853	PPI
MS.gene032853	MS.gene006736	PPI
MS.gene73831	MS.gene032853	PPI
MS.gene032853	MS.gene90825	PPI
MS.gene25347	MS.gene032853	PPI
MS.gene48656	MS.gene032853	PPI
MS.gene09364	MS.gene032853	PPI
MS.gene032853	MS.gene033899	PPI
MS.gene032853	MS.gene007876	PPI
MS.gene032853	MS.gene03755	PPI
MS.gene63213	MS.gene032853	PPI
MS.gene09360	MS.gene032853	PPI
MS.gene63223	MS.gene032853	PPI
MS.gene032853	MS.gene34737	PPI
MS.gene041325	MS.gene032853	PPI
MS.gene032853	MS.gene005798	PPI
MS.gene39754	MS.gene032853	PPI
MS.gene34824	MS.gene032853	PPI
MS.gene64993	MS.gene032853	PPI
MS.gene20329	MS.gene032853	PPI
MS.gene72959	MS.gene032853	PPI
MS.gene032853	MS.gene25348	PPI
MS.gene032853	MS.gene39754	PPI
MS.gene032853	MS.gene36065	PPI
MS.gene032853	MS.gene031575	PPI
MS.gene032853	MS.gene47772	PPI
MS.gene34731	MS.gene032853	PPI
MS.gene032853	MS.gene84247	PPI
MS.gene032853	MS.gene53646	PPI
MS.gene03757	MS.gene032853	PPI
MS.gene032853	MS.gene09371	PPI
MS.gene25353	MS.gene032853	PPI
MS.gene065516	MS.gene032853	PPI
MS.gene032853	MS.gene21682	PPI
MS.gene25352	MS.gene032853	PPI
MS.gene34704	MS.gene032853	PPI
MS.gene032853	MS.gene03760	PPI
MS.gene032853	MS.gene017193	PPI
MS.gene032861	MS.gene032853	PPI
MS.gene09368	MS.gene032853	PPI
MS.gene032853	MS.gene95710	PPI
MS.gene054411	MS.gene032853	PPI
MS.gene053514	MS.gene032853	PPI
MS.gene028696	MS.gene032853	PPI
MS.gene032853	MS.gene25386	PPI
MS.gene032853	MS.gene63221	PPI
MS.gene032853	MS.gene25450	PPI
MS.gene045439	MS.gene032853	PPI
MS.gene25415	MS.gene032853	PPI
MS.gene032853	MS.gene29498	PPI
MS.gene032853	MS.gene49015	PPI
MS.gene48654	MS.gene032853	PPI
MS.gene067702	MS.gene032853	PPI
MS.gene032853	MS.gene045449	PPI
MS.gene63212	MS.gene032853	PPI
MS.gene36066	MS.gene032853	PPI
MS.gene032853	MS.gene50153	PPI
MS.gene032853	MS.gene64988	PPI
MS.gene032853	MS.gene056133	PPI
MS.gene032853	MS.gene07659	PPI
MS.gene041326	MS.gene032853	PPI
MS.gene055880	MS.gene032853	PPI
MS.gene032853	MS.gene022920	PPI
MS.gene032853	MS.gene061767	PPI
MS.gene032853	MS.gene60523	PPI
MS.gene032853	MS.gene055877	PPI
MS.gene25412	MS.gene032853	PPI
MS.gene032853	MS.gene25352	PPI
MS.gene010865	MS.gene032853	PPI
MS.gene39745	MS.gene032853	PPI
MS.gene045446	MS.gene032853	PPI
MS.gene25410	MS.gene032853	PPI
MS.gene032853	MS.gene36809	PPI
MS.gene75902	MS.gene032853	PPI
MS.gene63185	MS.gene032853	PPI
MS.gene22129	MS.gene032853	PPI
MS.gene006727	MS.gene032853	PPI
MS.gene63094	MS.gene032853	PPI
MS.gene006725	MS.gene032853	PPI
MS.gene032853	MS.gene64984	PPI
MS.gene032853	MS.gene045448	PPI
MS.gene032853	MS.gene03758	PPI
MS.gene032853	MS.gene07658	PPI
MS.gene038427	MS.gene032853	PPI
MS.gene032853	MS.gene07674	PPI
MS.gene29873	MS.gene032853	PPI
MS.gene63112	MS.gene032853	PPI
MS.gene032853	MS.gene003456	PPI
MS.gene032853	MS.gene07666	PPI
MS.gene032853	MS.gene062537	PPI
MS.gene032853	MS.gene36943	PPI
MS.gene032853	MS.gene029093	PPI
MS.gene032853	MS.gene88183	PPI
MS.gene91884	MS.gene032853	PPI
MS.gene032853	MS.gene005799	PPI
MS.gene032853	MS.gene25298	PPI
MS.gene032853	MS.gene25448	PPI
MS.gene32300	MS.gene032853	PPI
MS.gene032853	MS.gene03759	PPI
MS.gene031572	MS.gene032853	PPI
MS.gene67920	MS.gene032853	PPI
MS.gene032853	MS.gene03748	PPI
MS.gene98001	MS.gene032853	PPI
MS.gene032853	MS.gene67920	PPI
MS.gene032853	MS.gene52136	PPI
MS.gene72960	MS.gene032853	PPI
MS.gene032853	MS.gene09996	PPI
MS.gene47783	MS.gene032853	PPI
MS.gene045441	MS.gene032853	PPI
MS.gene032853	MS.gene98324	PPI
MS.gene032853	MS.gene34740	PPI
MS.gene91885	MS.gene032853	PPI
MS.gene25411	MS.gene032853	PPI
MS.gene032853	MS.gene061286	PPI
MS.gene032853	MS.gene92095	PPI
MS.gene006692	MS.gene032853	PPI
MS.gene01653	MS.gene032853	PPI
MS.gene96120	MS.gene032853	PPI
MS.gene002093	MS.gene032853	PPI
MS.gene032853	MS.gene84248	PPI
MS.gene25414	MS.gene032853	PPI
MS.gene34739	MS.gene032853	PPI
MS.gene032853	MS.gene024262	PPI
MS.gene022915	MS.gene032853	PPI
MS.gene032853	MS.gene022912	PPI
MS.gene032853	MS.gene045452	PPI
MS.gene032853	MS.gene98001	PPI
MS.gene36764	MS.gene032853	PPI
MS.gene36942	MS.gene032853	PPI
MS.gene29863	MS.gene032853	PPI
MS.gene053312	MS.gene032853	PPI
MS.gene032853	MS.gene031570	PPI
MS.gene047137	MS.gene032853	PPI
MS.gene032853	MS.gene34703	PPI
MS.gene25344	MS.gene032853	PPI
MS.gene032853	MS.gene94460	PPI
MS.gene010958	MS.gene032853	PPI
MS.gene065234	MS.gene032853	PPI
MS.gene032853	MS.gene041323	PPI
MS.gene47780	MS.gene032853	PPI
MS.gene032853	MS.gene062282	PPI
MS.gene34753	MS.gene032853	PPI
MS.gene032853	MS.gene062526	PPI
MS.gene94457	MS.gene032853	PPI
MS.gene032853	MS.gene64992	PPI
MS.gene20330	MS.gene032853	PPI
MS.gene032853	MS.gene060770	PPI
MS.gene03756	MS.gene032853	PPI
MS.gene61631	MS.gene032853	PPI
MS.gene032853	MS.gene30074	PPI
MS.gene34216	MS.gene032853	PPI
MS.gene032853	MS.gene97346	PPI
MS.gene032853	MS.gene69407	PPI
MS.gene39752	MS.gene032853	PPI
MS.gene049943	MS.gene032853	PPI
MS.gene022909	MS.gene032853	PPI
MS.gene36763	MS.gene032853	PPI
MS.gene006730	MS.gene032853	PPI
MS.gene27665	MS.gene032853	PPI
MS.gene032853	MS.gene63224	PPI
MS.gene072946	MS.gene032853	PPI
MS.gene032853	MS.gene031603	PPI
MS.gene07667	MS.gene032853	PPI
MS.gene032853	MS.gene34736	PPI
MS.gene032853	MS.gene51793	PPI
MS.gene36804	MS.gene032853	PPI
MS.gene032853	MS.gene046838	PPI
MS.gene69561	MS.gene032853	PPI
MS.gene032853	MS.gene47781	PPI
MS.gene47782	MS.gene032853	PPI
MS.gene72958	MS.gene032853	PPI
MS.gene032853	MS.gene63222	PPI
MS.gene032853	MS.gene34730	PPI
MS.gene055882	MS.gene032853	PPI
MS.gene047136	MS.gene032853	PPI
MS.gene032853	MS.gene25418	PPI
MS.gene03752	MS.gene032853	PPI
MS.gene032853	MS.gene005795	PPI
MS.gene055754	MS.gene032853	PPI
MS.gene032853	MS.gene63260	PPI
MS.gene005794	MS.gene032853	PPI
MS.gene91886	MS.gene032853	PPI
MS.gene032853	MS.gene032860	PPI
MS.gene032853	MS.gene045772	PPI
MS.gene78146	MS.gene032853	PPI
MS.gene032852	MS.gene032853	PPI
MS.gene99983	MS.gene032853	PPI
MS.gene032853	MS.gene69561	PPI
MS.gene032853	MS.gene34733	PPI
MS.gene032853	MS.gene006723	PPI
MS.gene63260	MS.gene032853	PPI
MS.gene069762	MS.gene032853	PPI
MS.gene032853	MS.gene34825	PPI
MS.gene47775	MS.gene032853	PPI
MS.gene032853	MS.gene25296	PPI
MS.gene72957	MS.gene032853	PPI
MS.gene032853	MS.gene99980	PPI
MS.gene03750	MS.gene032853	PPI
MS.gene36752	MS.gene032853	PPI
MS.gene032379	MS.gene032853	PPI
MS.gene059408	MS.gene032853	PPI
MS.gene032853	MS.gene25297	PPI
MS.gene064211	MS.gene032853	PPI
MS.gene63257	MS.gene032853	PPI
MS.gene060769	MS.gene032853	PPI
MS.gene032853	MS.gene25451	PPI
MS.gene78164	MS.gene032853	PPI
MS.gene032853	MS.gene09370	PPI
MS.gene63214	MS.gene032853	PPI
MS.gene032853	MS.gene043122	PPI
MS.gene032853	MS.gene67957	PPI
MS.gene045440	MS.gene032853	PPI
MS.gene032853	MS.gene29863	PPI
MS.gene63210	MS.gene032853	PPI
MS.gene032862	MS.gene032853	PPI
MS.gene63217	MS.gene032853	PPI
MS.gene07668	MS.gene032853	PPI
MS.gene89956	MS.gene032853	PPI
MS.gene050239	MS.gene032853	PPI
MS.gene006736	MS.gene032853	PPI
MS.gene032296	MS.gene032853	PPI
MS.gene62747	MS.gene032853	PPI
MS.gene96357	MS.gene032853	PPI
MS.gene26058	MS.gene032853	PPI
MS.gene032853	MS.gene63256	PPI
MS.gene30067	MS.gene032853	PPI
MS.gene68082	MS.gene032853	PPI
MS.gene47777	MS.gene032853	PPI
MS.gene032853	MS.gene98323	PPI
MS.gene36067	MS.gene032853	PPI
MS.gene89957	MS.gene032853	PPI
MS.gene032853	MS.gene032295	PPI
MS.gene032853	MS.gene07664	PPI
MS.gene86337	MS.gene032853	PPI
MS.gene032853	MS.gene89076	PPI
MS.gene032853	MS.gene89955	PPI
MS.gene032853	MS.gene074346	PPI
MS.gene94458	MS.gene032853	PPI
MS.gene032853	MS.gene059409	PPI
MS.gene032853	MS.gene007875	PPI
MS.gene045437	MS.gene032853	PPI
MS.gene060771	MS.gene032853	PPI
MS.gene89076	MS.gene032853	PPI
MS.gene032853	MS.gene022919	PPI
MS.gene73780	MS.gene032853	PPI
MS.gene061286	MS.gene032853	PPI
MS.gene032853	MS.gene72956	PPI
MS.gene34706	MS.gene032853	PPI
MS.gene032853	MS.gene09363	PPI
MS.gene032853	MS.gene03753	PPI
MS.gene79176	MS.gene032853	PPI
MS.gene23197	MS.gene032853	PPI
MS.gene67919	MS.gene032853	PPI
MS.gene39749	MS.gene032853	PPI
MS.gene09370	MS.gene032853	PPI
MS.gene032853	MS.gene72961	PPI
MS.gene043700	MS.gene032853	PPI
MS.gene21278	MS.gene032853	PPI
MS.gene032853	MS.gene39753	PPI
MS.gene72954	MS.gene032853	PPI
MS.gene021295	MS.gene032853	PPI
MS.gene032853	MS.gene010060	PPI
MS.gene053313	MS.gene032853	PPI
MS.gene99982	MS.gene032853	PPI
MS.gene72962	MS.gene032853	PPI
MS.gene032853	MS.gene002112	PPI
MS.gene032853	MS.gene26444	PPI
MS.gene032853	MS.gene040413	PPI
MS.gene032853	MS.gene09997	PPI
MS.gene25396	MS.gene032853	PPI
MS.gene63111	MS.gene032853	PPI
MS.gene032853	MS.gene047153	PPI
MS.gene23706	MS.gene032853	PPI
MS.gene032853	MS.gene75903	PPI
MS.gene032853	MS.gene63105	PPI
MS.gene032853	MS.gene006728	PPI
MS.gene032853	MS.gene49013	PPI
MS.gene032853	MS.gene01651	PPI
MS.gene043664	MS.gene032853	PPI
MS.gene072003	MS.gene032853	PPI
MS.gene032853	MS.gene066439	PPI
MS.gene49018	MS.gene032853	PPI
MS.gene23226	MS.gene032853	PPI
MS.gene032853	MS.gene045440	PPI
MS.gene032853	MS.gene89963	PPI
MS.gene032853	MS.gene98598	PPI
MS.gene032853	MS.gene031573	PPI
MS.gene032853	MS.gene60525	PPI
MS.gene072000	MS.gene032853	PPI
MS.gene032853	MS.gene60521	PPI
MS.gene032853	MS.gene002111	PPI
MS.gene032853	MS.gene49011	PPI
MS.gene032853	MS.gene028696	PPI
MS.gene49513	MS.gene032853	PPI
MS.gene96923	MS.gene032853	PPI
MS.gene69850	MS.gene032853	PPI
MS.gene032853	MS.gene81090	PPI
MS.gene032853	MS.gene050947	PPI
MS.gene032853	MS.gene07669	PPI
MS.gene64989	MS.gene032853	PPI
MS.gene032853	MS.gene89961	PPI
MS.gene07678	MS.gene032853	PPI
MS.gene065373	MS.gene032853	PPI
MS.gene032853	MS.gene033695	PPI
MS.gene032853	MS.gene045451	PPI
MS.gene032853	MS.gene63218	PPI
MS.gene055883	MS.gene032853	PPI
MS.gene032853	MS.gene91201	PPI
MS.gene072244	MS.gene032853	PPI
MS.gene072547	MS.gene032853	PPI
MS.gene032853	MS.gene07660	PPI
MS.gene032853	MS.gene03749	PPI
MS.gene032853	MS.gene34802	PPI
MS.gene032853	MS.gene056517	PPI
MS.gene033897	MS.gene032853	PPI
MS.gene032853	MS.gene95902	PPI
MS.gene032853	MS.gene54959	PPI
MS.gene032853	MS.gene047839	PPI
MS.gene032853	MS.gene43257	PPI
MS.gene032853	MS.gene34706	PPI
MS.gene53647	MS.gene032853	PPI
MS.gene032853	MS.gene073176	PPI
MS.gene34738	MS.gene032853	PPI
MS.gene032853	MS.gene72952	PPI
MS.gene032853	MS.gene66626	PPI
MS.gene72963	MS.gene032853	PPI
MS.gene032853	MS.gene51795	PPI
MS.gene51793	MS.gene032853	PPI
MS.gene071257	MS.gene032853	PPI
MS.gene34735	MS.gene032853	PPI
MS.gene032853	MS.gene07665	PPI
MS.gene010934	MS.gene032853	PPI
MS.gene032853	MS.gene050744	PPI
MS.gene032853	MS.gene34766	PPI
MS.gene54960	MS.gene032853	PPI
MS.gene046839	MS.gene032853	PPI
MS.gene63177	MS.gene032853	PPI
MS.gene25449	MS.gene032853	PPI
MS.gene033694	MS.gene032853	PPI
MS.gene032853	MS.gene09367	PPI
MS.gene022916	MS.gene032853	PPI
MS.gene032853	MS.gene39747	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene032853.t1	MTR_5g039970	89.759	166	17	0	5	170	1	166	4.99e-94	280
MS.gene032853.t1	MTR_7g023330	41.424	309	126	8	6	264	3	306	2.25e-53	178
MS.gene032853.t1	MTR_4g080590	51.765	170	78	1	1	170	1	166	9.10e-50	168
MS.gene032853.t1	MTR_4g080590	57.447	94	38	1	171	264	269	360	1.86e-22	95.5
MS.gene032853.t1	MTR_4g080590	51.765	170	78	1	1	170	1	166	6.72e-49	167
MS.gene032853.t1	MTR_4g080590	57.447	94	38	1	171	264	269	360	3.54e-22	95.5
MS.gene032853.t1	MTR_3g048290	50.877	171	82	1	1	169	1	171	1.14e-47	165
MS.gene032853.t1	MTR_4g080787	51.648	182	72	4	1	170	1	178	1.39e-45	159
MS.gene032853.t1	MTR_4g080787	61.039	77	30	0	190	266	298	374	1.08e-18	85.5
MS.gene032853.t1	MTR_4g080773	51.934	181	71	4	1	169	1	177	5.48e-45	158
MS.gene032853.t1	MTR_4g080773	56.383	94	40	1	171	264	283	375	2.83e-19	87.4
MS.gene032853.t1	MTR_4g080773	51.934	181	71	4	1	169	1	177	6.96e-45	158
MS.gene032853.t1	MTR_4g080773	56.383	94	40	1	171	264	283	375	3.57e-19	87.0
MS.gene032853.t1	MTR_5g039950	49.133	173	68	3	1	170	1	156	7.38e-43	151
MS.gene032853.t1	MTR_5g039950	49.057	106	52	2	160	264	224	328	2.55e-16	78.6
MS.gene032853.t1	MTR_4g130200	52.201	159	41	2	13	170	10	134	9.29e-40	142
MS.gene032853.t1	MTR_4g130200	57.292	96	40	1	171	266	208	302	1.50e-25	104
MS.gene032853.t1	MTR_7g023310	46.512	172	85	4	1	169	1	168	8.00e-39	141
MS.gene032853.t1	MTR_7g023310	54.717	106	43	3	161	264	265	367	4.82e-11	62.8
MS.gene032853.t1	MTR_7g039630	41.040	173	64	2	1	170	1	138	8.82e-31	117
MS.gene032853.t1	MTR_7g039630	51.579	95	44	2	171	264	245	338	3.56e-16	77.4
MS.gene032853.t1	MTR_2g094750	42.857	168	77	4	21	169	88	255	7.87e-25	103
MS.gene032853.t1	MTR_4g081030	39.375	160	81	3	13	169	7	153	1.51e-23	98.6
MS.gene032853.t1	MTR_4g080813	68.966	58	18	0	12	69	8	65	1.55e-23	92.0
MS.gene032853.t1	MTR_4g080807	52.632	95	42	2	171	264	148	240	1.07e-15	76.6
MS.gene032853.t1	MTR_4g080807	38.318	107	61	1	94	200	1	102	4.01e-15	74.7
MS.gene032853.t1	MTR_2g082800	31.410	156	93	6	10	161	16	161	1.79e-13	70.1
MS.gene032853.t1	MTR_6g018660	46.988	83	36	1	12	94	9	83	8.18e-13	67.8
MS.gene032853.t1	MTR_5g021550	32.836	134	82	3	22	147	18	151	1.08e-12	64.7
MS.gene032853.t1	MTR_8g467800	35.870	92	56	2	14	105	11	99	5.07e-12	65.5
MS.gene032853.t1	MTR_8g467800	35.870	92	56	2	14	105	11	99	6.83e-12	65.5
MS.gene032853.t1	MTR_8g014290	35.000	100	57	2	22	113	9	108	7.96e-11	59.7
MS.gene032853.t1	MTR_5g080710	32.215	149	91	4	23	169	33	173	8.04e-11	62.4
MS.gene032853.t1	MTR_8g014160	47.619	63	29	2	22	83	40	99	9.55e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene032853.t1	AT3G58860	29.747	158	98	5	23	172	7	159	4.08e-14	72.0
MS.gene032853.t1	AT4G14096	29.143	175	99	9	17	174	2	168	5.96e-12	65.9
MS.gene032853.t1	AT4G14096	29.143	175	99	9	17	174	2	168	5.96e-12	65.9
MS.gene032853.t1	AT3G59200	29.861	144	88	4	23	160	7	143	8.19e-12	65.1
MS.gene032853.t1	AT3G59200	29.861	144	88	4	23	160	7	143	1.34e-11	64.7
MS.gene032853.t1	AT4G14103	31.288	163	96	8	17	173	2	154	1.89e-11	64.3
MS.gene032853.t1	AT4G14103	31.288	163	96	8	17	173	2	154	1.94e-11	63.9
MS.gene032853.t1	AT4G14103	31.288	163	96	8	17	173	2	154	1.94e-11	63.9
MS.gene032853.t1	AT4G09920	31.333	150	97	4	21	169	1	145	4.75e-11	62.4
MS.gene032853.t1	AT4G09920	31.333	150	97	4	21	169	1	145	4.75e-11	62.4
MS.gene032853.t1	AT4G09920	31.333	150	97	4	21	169	1	145	4.75e-11	62.4
MS.gene032853.t1	AT4G09920	31.333	150	97	4	21	169	1	145	5.59e-11	62.4
MS.gene032853.t1	AT4G09920	31.333	150	97	4	21	169	1	145	5.59e-11	62.4
MS.gene032853.t1	AT3G59000	27.397	146	98	5	23	163	2	144	8.01e-11	62.0
MS.gene032853.t1	AT3G59230	30.323	155	96	7	14	161	4	153	8.74e-11	62.4

Find 49 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAATATTCTGGTGTTGATTT+TGG	0.148987	5.4:-29628644	None:intergenic
AATAAGTTGTGTTTAGAATT+TGG	0.196720	5.4:+29628251	MS.gene032853:CDS
TTTCCACTTTGTAGCTAATA+TGG	0.218479	5.4:-29627931	None:intergenic
CTTTGGAGCTTCGGTAAAAT+TGG	0.258230	5.4:-29627807	None:intergenic
TTGCACATTGAGTAATATTC+TGG	0.284355	5.4:-29628656	None:intergenic
TATTGCCTATATCATGTCTT+TGG	0.286603	5.4:-29627824	None:intergenic
GGAAGTTCTTCACATTTCTA+AGG	0.299285	5.4:+29629024	MS.gene032853:CDS
TTGGGATGCTGAGAAATTAT+TGG	0.306887	5.4:-29628222	None:intergenic
AGCTAATTCTTTGTTATCTT+CGG	0.308106	5.4:+29628133	MS.gene032853:CDS
GACGCATCTTGACGTGCTCT+TGG	0.332611	5.4:+29628943	MS.gene032853:CDS
AACACAACTTATTCAATGAT+TGG	0.333763	5.4:-29628241	None:intergenic
AAGACATGATATAGGCAATA+TGG	0.336639	5.4:+29627827	MS.gene032853:CDS
ACGCATCTTGACGTGCTCTT+GGG	0.340451	5.4:+29628944	MS.gene032853:CDS
GTACAACAAGCTGATATTGA+TGG	0.395299	5.4:+29628104	MS.gene032853:CDS
GTTCTTACAGCATCTTTAGT+AGG	0.397467	5.4:-29627906	None:intergenic
GAGTTATTGAGTCGACTTGC+TGG	0.405823	5.4:+29628681	MS.gene032853:CDS
TCTCCACAAGACTCCTAATC+TGG	0.414930	5.4:+29629003	MS.gene032853:CDS
ACACAACTTATTCAATGATT+GGG	0.417424	5.4:-29628240	None:intergenic
ACTTGGCAAATGTATGGTCT+AGG	0.422387	5.4:-29628190	None:intergenic
TGGGATGCTGAGAAATTATT+GGG	0.429808	5.4:-29628221	None:intergenic
ATATCATGTCTTTGGAGCTT+CGG	0.433182	5.4:-29627816	None:intergenic
GAAAATCAAAGACGGATAAG+TGG	0.437767	5.4:-29627965	None:intergenic
ATGTGAAGAACTTCCAGATT+AGG	0.448255	5.4:-29629016	None:intergenic
ACACAAACTTGGCAAATGTA+TGG	0.460308	5.4:-29628196	None:intergenic
GGCAATATGGAAGATATGAT+TGG	0.472912	5.4:+29627840	MS.gene032853:CDS
AAGCTCCAAAGACATGATAT+AGG	0.484886	5.4:+29627819	MS.gene032853:CDS
ATTATCAAATCATACTCGTC+AGG	0.486709	5.4:+29628719	MS.gene032853:CDS
GGAAAATTGCCTCATAGATC+AGG	0.490060	5.4:+29628031	MS.gene032853:CDS
CTAGGGAAAGTTTAAGATCA+AGG	0.498420	5.4:-29628172	None:intergenic
CGCATCTTGACGTGCTCTTG+GGG	0.507553	5.4:+29628945	MS.gene032853:CDS
GAATGCAAAGTCTTTCTACA+TGG	0.517105	5.4:-29628079	None:intergenic
CTTGGCAAATGTATGGTCTA+GGG	0.521734	5.4:-29628189	None:intergenic
ATTATTGGGTAACACAAACT+TGG	0.528159	5.4:-29628207	None:intergenic
ATATGAAGAAGAACGGCCTC+AGG	0.530569	5.4:-29627870	None:intergenic
AATGCCTGCTAATACTTCAC+TGG	0.534698	5.4:-29628981	None:intergenic
CTTCCAGATTAGGAGTCTTG+TGG	0.537229	5.4:-29629006	None:intergenic
CTTCCATATTAGCTACAAAG+TGG	0.559991	5.4:+29627928	MS.gene032853:CDS
GTCACCAGTGAAGTATTAGC+AGG	0.567638	5.4:+29628977	MS.gene032853:CDS
TTCAGTCTATATATACCTGA+TGG	0.576600	5.4:+29628275	MS.gene032853:CDS
GTTTGTCCACCTGATCTATG+AGG	0.579288	5.4:-29628040	None:intergenic
CTACAAAGTGGAAATACTTG+TGG	0.581650	5.4:+29627940	MS.gene032853:CDS
AGAAAGAATATGAAGAAGAA+CGG	0.583530	5.4:-29627877	None:intergenic
AAAATCAAAGACGGATAAGT+GGG	0.605687	5.4:-29627964	None:intergenic
GTCAAAGCCAGAACAGAAGT+CGG	0.624555	5.4:+29628010	MS.gene032853:CDS
AAATTGCCTCATAGATCAGG+TGG	0.634665	5.4:+29628034	MS.gene032853:CDS
TGCGTCAAATTGCAGAACGA+AGG	0.636297	5.4:-29628926	None:intergenic
TGTCTTAACTATGCAAAAGA+CGG	0.637851	5.4:+29628890	MS.gene032853:CDS
ATAAACTTGAAAATCAAAGA+CGG	0.648132	5.4:-29627973	None:intergenic
TATGATTGGTGAATTACCTG+AGG	0.712908	5.4:+29627854	MS.gene032853:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTCAAGTTTATTGTAATT+CGG	+	chr5.4:29627983-29628002	MS.gene032853:CDS	15.0%
!!	AATACATAAAGAATATGCAA+TGG	-	chr5.4:29628836-29628855	None:intergenic	20.0%
!!	ACAAGGAAAAAATTTATAGT+TGG	-	chr5.4:29628573-29628592	None:intergenic	20.0%
!!	ATAAACTTGAAAATCAAAGA+CGG	-	chr5.4:29627976-29627995	None:intergenic	20.0%
!!!	AATAAGTTGTGTTTAGAATT+TGG	+	chr5.4:29628251-29628270	MS.gene032853:CDS	20.0%
!!!	AGATATAATGTTTTCAAGTT+AGG	-	chr5.4:29628311-29628330	None:intergenic	20.0%
!!!	GATATAATGTTTTCAAGTTA+GGG	-	chr5.4:29628310-29628329	None:intergenic	20.0%
!	AACACAACTTATTCAATGAT+TGG	-	chr5.4:29628244-29628263	None:intergenic	25.0%
!	AATTTATTGACAATGTTGCT+TGG	+	chr5.4:29628792-29628811	MS.gene032853:intron	25.0%
!	ACACAACTTATTCAATGATT+GGG	-	chr5.4:29628243-29628262	None:intergenic	25.0%
!	AGAAAGAATATGAAGAAGAA+CGG	-	chr5.4:29627880-29627899	None:intergenic	25.0%
!	ATGTTTCAATTTCCACATTA+AGG	+	chr5.4:29628445-29628464	MS.gene032853:intron	25.0%
!	GAAAAAATTTATAGTTGGAC+TGG	-	chr5.4:29628568-29628587	None:intergenic	25.0%
!	GTCCAAACAAAATTTATACA+AGG	-	chr5.4:29628408-29628427	None:intergenic	25.0%
!!	AGCTAATTCTTTGTTATCTT+CGG	+	chr5.4:29628133-29628152	MS.gene032853:CDS	25.0%
!!	ATTTATTGACAATGTTGCTT+GGG	+	chr5.4:29628793-29628812	MS.gene032853:intron	25.0%
!!	GACCTTGTATAAATTTTGTT+TGG	+	chr5.4:29628403-29628422	MS.gene032853:intron	25.0%
!!!	AATATTCTGGTGTTGATTTT+GGG	-	chr5.4:29628646-29628665	None:intergenic	25.0%
!!!	TAATATTCTGGTGTTGATTT+TGG	-	chr5.4:29628647-29628666	None:intergenic	25.0%
	AAAATCAAAGACGGATAAGT+GGG	-	chr5.4:29627967-29627986	None:intergenic	30.0%
	AAGACATGATATAGGCAATA+TGG	+	chr5.4:29627827-29627846	MS.gene032853:CDS	30.0%
	ACTTATACCAACTAACTCAA+TGG	-	chr5.4:29628478-29628497	None:intergenic	30.0%
	ATCAATACATGCATCAACTA+AGG	-	chr5.4:29628607-29628626	None:intergenic	30.0%
	ATTATCAAATCATACTCGTC+AGG	+	chr5.4:29628719-29628738	MS.gene032853:CDS	30.0%
	ATTATTGGGTAACACAAACT+TGG	-	chr5.4:29628210-29628229	None:intergenic	30.0%
	CAACATCAAATTTGATTGCA+CGG	-	chr5.4:29628518-29628537	None:intergenic	30.0%
	CATAGTTAAGACACTAGTAA+GGG	-	chr5.4:29628883-29628902	None:intergenic	30.0%
	TATTGCCTATATCATGTCTT+TGG	-	chr5.4:29627827-29627846	None:intergenic	30.0%
	TGTCTTAACTATGCAAAAGA+CGG	+	chr5.4:29628890-29628909	MS.gene032853:CDS	30.0%
	TTCAGTCTATATATACCTGA+TGG	+	chr5.4:29628275-29628294	MS.gene032853:CDS	30.0%
	TTGCACATTGAGTAATATTC+TGG	-	chr5.4:29628659-29628678	None:intergenic	30.0%
	TTTCCACTTTGTAGCTAATA+TGG	-	chr5.4:29627934-29627953	None:intergenic	30.0%
!	GAGTTAGTTGGTATAAGTTA+TGG	+	chr5.4:29628480-29628499	MS.gene032853:intron	30.0%
!!!	ATATTCTGGTGTTGATTTTG+GGG	-	chr5.4:29628645-29628664	None:intergenic	30.0%
	AAGCTCCAAAGACATGATAT+AGG	+	chr5.4:29627819-29627838	MS.gene032853:CDS	35.0%
	AAGTTGACCATTGAGTTAGT+TGG	+	chr5.4:29628468-29628487	MS.gene032853:intron	35.0%
	AATGGTCAACTTCCTTAATG+TGG	-	chr5.4:29628460-29628479	None:intergenic	35.0%
	ACACAAACTTGGCAAATGTA+TGG	-	chr5.4:29628199-29628218	None:intergenic	35.0%
	ATGCATCAACTAAGGAGATA+GGG	-	chr5.4:29628599-29628618	None:intergenic	35.0%
	ATGTGAAGAACTTCCAGATT+AGG	-	chr5.4:29629019-29629038	None:intergenic	35.0%
	CTACAAAGTGGAAATACTTG+TGG	+	chr5.4:29627940-29627959	MS.gene032853:CDS	35.0%
	CTTCCATATTAGCTACAAAG+TGG	+	chr5.4:29627928-29627947	MS.gene032853:CDS	35.0%
	GAAAATCAAAGACGGATAAG+TGG	-	chr5.4:29627968-29627987	None:intergenic	35.0%
	GAATGCAAAGTCTTTCTACA+TGG	-	chr5.4:29628082-29628101	None:intergenic	35.0%
	GCATAGTTAAGACACTAGTA+AGG	-	chr5.4:29628884-29628903	None:intergenic	35.0%
	GGAAGTTCTTCACATTTCTA+AGG	+	chr5.4:29629024-29629043	MS.gene032853:CDS	35.0%
	GGCAATATGGAAGATATGAT+TGG	+	chr5.4:29627840-29627859	MS.gene032853:CDS	35.0%
	GTACAACAAGCTGATATTGA+TGG	+	chr5.4:29628104-29628123	MS.gene032853:CDS	35.0%
	GTTCTTACAGCATCTTTAGT+AGG	-	chr5.4:29627909-29627928	None:intergenic	35.0%
	TATACAAGGTCAACTCTTGT+AGG	-	chr5.4:29628394-29628413	None:intergenic	35.0%
	TATGATTGGTGAATTACCTG+AGG	+	chr5.4:29627854-29627873	MS.gene032853:CDS	35.0%
	TGGGATGCTGAGAAATTATT+GGG	-	chr5.4:29628224-29628243	None:intergenic	35.0%
	TTACTATTAGCCGTGAAACA+TGG	-	chr5.4:29629075-29629094	None:intergenic	35.0%
	TTCCTTCACAAATGAGAAGT+CGG	+	chr5.4:29628340-29628359	MS.gene032853:intron	35.0%
	TTGGGATGCTGAGAAATTAT+TGG	-	chr5.4:29628225-29628244	None:intergenic	35.0%
!	CTAGGGAAAGTTTAAGATCA+AGG	-	chr5.4:29628175-29628194	None:intergenic	35.0%
!!	ATATCATGTCTTTGGAGCTT+CGG	-	chr5.4:29627819-29627838	None:intergenic	35.0%
	AAATTGCCTCATAGATCAGG+TGG	+	chr5.4:29628034-29628053	MS.gene032853:CDS	40.0%
	AATGCCTGCTAATACTTCAC+TGG	-	chr5.4:29628984-29629003	None:intergenic	40.0%
	ACTTGGCAAATGTATGGTCT+AGG	-	chr5.4:29628193-29628212	None:intergenic	40.0%
	CATGCATCAACTAAGGAGAT+AGG	-	chr5.4:29628600-29628619	None:intergenic	40.0%
	CTAAGGAGATAGGGTTAACA+AGG	-	chr5.4:29628590-29628609	None:intergenic	40.0%
	CTTGGCAAATGTATGGTCTA+GGG	-	chr5.4:29628192-29628211	None:intergenic	40.0%
	GCTTCTTCTACCATGTTTCA+CGG	+	chr5.4:29629062-29629081	MS.gene032853:intron	40.0%
	GGAAAATTGCCTCATAGATC+AGG	+	chr5.4:29628031-29628050	MS.gene032853:CDS	40.0%
	TTAGGGAAACGTATACCATC+AGG	-	chr5.4:29628293-29628312	None:intergenic	40.0%
!	CAATTTTCCGACTTCTGTTC+TGG	-	chr5.4:29628020-29628039	None:intergenic	40.0%
!!	CTTTGGAGCTTCGGTAAAAT+TGG	-	chr5.4:29627810-29627829	None:intergenic	40.0%
	AAGGTCAACTCTTGTAGGAC+AGG	-	chr5.4:29628389-29628408	None:intergenic	45.0%
	AGGTCAACTCTTGTAGGACA+GGG	-	chr5.4:29628388-29628407	None:intergenic	45.0%
	ATATGAAGAAGAACGGCCTC+AGG	-	chr5.4:29627873-29627892	None:intergenic	45.0%
	CTTCCAGATTAGGAGTCTTG+TGG	-	chr5.4:29629009-29629028	None:intergenic	45.0%
	GTCAAAGCCAGAACAGAAGT+CGG	+	chr5.4:29628010-29628029	MS.gene032853:CDS	45.0%
	GTTTGTCCACCTGATCTATG+AGG	-	chr5.4:29628043-29628062	None:intergenic	45.0%
	TCTCCACAAGACTCCTAATC+TGG	+	chr5.4:29629003-29629022	MS.gene032853:CDS	45.0%
	TGCGTCAAATTGCAGAACGA+AGG	-	chr5.4:29628929-29628948	None:intergenic	45.0%
!	AGCCGACTTCTCATTTGTGA+AGG	-	chr5.4:29628345-29628364	None:intergenic	45.0%
!	CAAATGAGAAGTCGGCTCAA+CGG	+	chr5.4:29628348-29628367	MS.gene032853:intron	45.0%
!	GTCACCAGTGAAGTATTAGC+AGG	+	chr5.4:29628977-29628996	MS.gene032853:CDS	45.0%
!!	GAGTTATTGAGTCGACTTGC+TGG	+	chr5.4:29628681-29628700	MS.gene032853:CDS	45.0%
	ACGCATCTTGACGTGCTCTT+GGG	+	chr5.4:29628944-29628963	MS.gene032853:CDS	50.0%
	CGCATCTTGACGTGCTCTTG+GGG	+	chr5.4:29628945-29628964	MS.gene032853:CDS	55.0%
	GACGCATCTTGACGTGCTCT+TGG	+	chr5.4:29628943-29628962	MS.gene032853:CDS	55.0%
!	CGGCTCAACGGCTTTTGTCT+GGG	+	chr5.4:29628360-29628379	MS.gene032853:intron	55.0%
!	TCGGCTCAACGGCTTTTGTC+TGG	+	chr5.4:29628359-29628378	MS.gene032853:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	29627786	29629094	29627786	ID=MS.gene032853
chr5.4	mRNA	29627786	29629094	29627786	ID=MS.gene032853.t1;Parent=MS.gene032853
chr5.4	exon	29627786	29628296	29627786	ID=MS.gene032853.t1.exon1;Parent=MS.gene032853.t1
chr5.4	CDS	29627786	29628296	29627786	ID=cds.MS.gene032853.t1;Parent=MS.gene032853.t1
chr5.4	exon	29628610	29628740	29628610	ID=MS.gene032853.t1.exon2;Parent=MS.gene032853.t1
chr5.4	CDS	29628610	29628740	29628610	ID=cds.MS.gene032853.t1;Parent=MS.gene032853.t1
chr5.4	exon	29628890	29629045	29628890	ID=MS.gene032853.t1.exon3;Parent=MS.gene032853.t1
chr5.4	CDS	29628890	29629045	29628890	ID=cds.MS.gene032853.t1;Parent=MS.gene032853.t1
chr5.4	exon	29629092	29629094	29629092	ID=MS.gene032853.t1.exon4;Parent=MS.gene032853.t1
chr5.4	CDS	29629092	29629094	29629092	ID=cds.MS.gene032853.t1;Parent=MS.gene032853.t1

Gene Sequence

>MS.gene032853

ATGTCTGCTACAATCACATCACCAATTTTACCGAAGCTCCAAAGACATGATATAGGCAATATGGAAGATATGATTGGTGAATTACCTGAGGCCGTTCTTCTTCATATTCTTTCTTTACTTCCTACTAAAGATGCTGTAAGAACTTCCATATTAGCTACAAAGTGGAAATACTTGTGGACCCACTTATCCGTCTTTGATTTTCAAGTTTATTGTAATTCGGATGTGTCAAAGCCAGAACAGAAGTCGGAAAATTGCCTCATAGATCAGGTGGACAAACTACTTCACACATCTAACCATGTAGAAAGACTTTGCATTCAAGTACAACAAGCTGATATTGATGGAGAAAAAGCTAATTCTTTGTTATCTTCGGCATTGATGCACAAACTCCTTGATCTTAAACTTTCCCTAGACCATACATTTGCCAAGTTTGTGTTACCCAATAATTTCTCAGCATCCCAATCATTGAATAAGTTGTGTTTAGAATTTGGTTTCAGTCTATATATACCTGATGGTATACGTTTCCCTAACTTGAAAACATTATATCTTTCACATCTTTCCTTCACAAATGAGAAGTCGGCTCAACGGCTTTTGTCTGGGTGCCCTGTCCTACAAGAGTTGACCTTGTATAAATTTTGTTTGGACAAACATAAAACAGATCGATGTTTCAATTTCCACATTAAGGAAGTTGACCATTGAGTTAGTTGGTATAAGTTATGGTCGTTTTCACAGCCGTGCAATCAAATTTGATGTTGTGAATCTTTTATCTTTAAGCTACTCAGCCAGTCCAACTATAAATTTTTTCCTTGTTAACCCTATCTCCTTAGTTGATGCATGTATTGATCTTGTGTATTACAATCCCCAAAATCAACACCAGAATATTACTCAATGTGCAATTGAGTTATTGAGTCGACTTGCTGGTGTCAAATCTCTTAGATTATCAAATCATACTCGTCAGGTATGTTTTATTGTTTACTTATCATCTTCATTTTTCTAAATGTTGTATATCAATTTATTGACAATGTTGCTTGGGTTATGTGCTTCTTGATTCCATTGCATATTCTTTATGTATTACAATGATGTATCTATTTTTGTTTCCCTTACTAGTGTCTTAACTATGCAAAAGACGGTCTTCATCTTTTGCCTTCGTTCTGCAATTTGACGCATCTTGACGTGCTCTTGGGGTATTTTTACGTCACCAGTGAAGTATTAGCAGGCATTCTCCACAAGACTCCTAATCTGGAAGTTCTTCACATTTCTAAGGTACATCACGTATCTTGCTTCTTCTACCATGTTTCACGGCTAATAGTAA

Protein sequence

>MS.gene032853.t1

MSATITSPILPKLQRHDIGNMEDMIGELPEAVLLHILSLLPTKDAVRTSILATKWKYLWTHLSVFDFQVYCNSDVSKPEQKSENCLIDQVDKLLHTSNHVERLCIQVQQADIDGEKANSLLSSALMHKLLDLKLSLDHTFAKFVLPNNFSASQSLNKLCLEFGFSLYIPDVDACIDLVYYNPQNQHQNITQCAIELLSRLAGVKSLRLSNHTRQCLNYAKDGLHLLPSFCNLTHLDVLLGYFYVTSEVLAGILHKTPNLEVLHISK