AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032852


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032852.t1 MTR_5g039950 80.624 449 38 3 1 449 21 420 0.0 698
MS.gene032852.t1 MTR_7g039630 81.006 358 32 1 1 358 21 342 0.0 563
MS.gene032852.t1 MTR_4g080787 47.712 459 217 7 1 448 17 463 1.70e-128 381
MS.gene032852.t1 MTR_4g080590 48.546 447 211 7 1 446 21 449 3.03e-118 353
MS.gene032852.t1 MTR_4g080773 46.889 450 219 6 1 439 17 457 6.64e-118 354
MS.gene032852.t1 MTR_4g080773 46.889 450 219 6 1 439 17 457 8.07e-118 354
MS.gene032852.t1 MTR_3g048290 45.916 453 231 6 1 448 21 464 3.02e-115 347
MS.gene032852.t1 MTR_4g080590 49.862 363 163 7 1 359 21 368 1.66e-96 295
MS.gene032852.t1 MTR_4g130200 41.425 449 187 6 1 448 18 391 2.54e-96 295
MS.gene032852.t1 MTR_7g023310 43.084 441 230 7 2 439 25 447 1.12e-94 293
MS.gene032852.t1 MTR_2g094750 49.604 379 163 9 1 356 88 461 1.57e-94 293
MS.gene032852.t1 MTR_5g039970 48.089 314 142 6 1 305 17 318 2.53e-79 249
MS.gene032852.t1 MTR_7g023330 37.330 442 199 10 2 439 19 386 1.35e-74 239
MS.gene032852.t1 MTR_4g080807 38.753 369 183 5 75 443 1 326 1.08e-66 219
MS.gene032852.t1 MTR_4g081030 39.628 376 193 10 2 367 16 367 2.35e-57 194
MS.gene032852.t1 MTR_1g082260 47.273 165 86 1 47 210 11 175 3.03e-35 129
MS.gene032852.t1 MTR_2g094450 41.954 174 84 4 183 355 31 188 2.80e-29 114
MS.gene032852.t1 MTR_8g467800 29.487 468 273 17 1 444 18 452 6.19e-29 118
MS.gene032852.t1 MTR_7g094030 26.754 456 273 16 2 429 27 449 4.73e-23 101
MS.gene032852.t1 MTR_5g084070 27.586 435 272 11 3 432 13 409 2.76e-22 99.0
MS.gene032852.t1 MTR_2g072730 26.490 453 280 19 2 429 15 439 1.87e-21 97.1
MS.gene032852.t1 MTR_5g005690 24.661 442 289 8 7 416 25 454 2.37e-21 96.7
MS.gene032852.t1 MTR_2g072530 24.533 428 291 12 2 419 12 417 8.06e-21 94.7
MS.gene032852.t1 MTR_3g019240 30.887 327 179 14 2 310 25 322 1.04e-19 90.9
MS.gene032852.t1 MTR_2g082850 29.781 366 217 12 2 350 21 363 2.36e-19 89.7
MS.gene032852.t1 MTR_5g092960 27.212 452 275 18 3 428 19 442 3.34e-19 90.1
MS.gene032852.t1 MTR_8g062270 28.182 440 256 19 3 413 16 424 6.99e-19 89.0
MS.gene032852.t1 MTR_4g032730 26.124 467 273 22 3 428 15 450 8.46e-19 89.0
MS.gene032852.t1 MTR_5g080710 25.060 419 283 10 3 417 33 424 3.67e-18 87.0
MS.gene032852.t1 MTR_4g080813 53.623 69 31 1 1 68 17 85 6.57e-18 79.0
MS.gene032852.t1 MTR_1g090883 28.883 367 217 14 3 354 19 356 1.91e-17 84.0
MS.gene032852.t1 MTR_8g467800 30.225 311 190 11 1 303 18 309 1.99e-17 83.6
MS.gene032852.t1 MTR_2g083840 26.593 455 275 19 3 433 21 440 3.96e-17 84.0
MS.gene032852.t1 MTR_8g468810 25.885 452 262 19 2 421 24 434 5.05e-17 83.6
MS.gene032852.t1 MTR_8g058970 26.350 463 278 13 3 428 19 455 5.14e-17 83.6
MS.gene032852.t1 MTR_4g045900 24.145 497 300 18 3 440 26 504 6.68e-17 83.2
MS.gene032852.t1 MTR_8g468840 24.664 446 297 13 1 429 12 435 8.85e-17 82.8
MS.gene032852.t1 MTR_1g115250 26.316 418 273 14 2 416 31 416 8.94e-17 82.4
MS.gene032852.t1 MTR_0049s0110 22.986 422 271 11 3 413 8 386 1.65e-16 81.6
MS.gene032852.t1 MTR_0049s0110 23.596 356 225 9 3 354 8 320 3.84e-16 79.7
MS.gene032852.t1 MTR_0049s0110 23.596 356 225 9 3 354 8 320 4.26e-16 79.7
MS.gene032852.t1 MTR_1g038710 27.689 437 262 18 3 413 19 427 6.00e-16 80.1
MS.gene032852.t1 MTR_4g056040 28.384 458 256 19 3 413 9 441 6.89e-16 80.1
MS.gene032852.t1 MTR_5g092960 27.371 369 227 14 3 352 19 365 8.97e-16 79.3
MS.gene032852.t1 MTR_8g445780 28.469 418 238 17 2 398 12 389 1.38e-15 78.6
MS.gene032852.t1 MTR_3g448340 25.275 455 286 17 3 425 6 438 1.92e-15 78.6
MS.gene032852.t1 MTR_4g056030 26.941 438 258 17 3 413 9 411 4.93e-15 77.4
MS.gene032852.t1 MTR_8g066650 28.793 323 197 10 2 314 79 378 5.02e-15 77.4
MS.gene032852.t1 MTR_4g092430 29.226 349 190 16 2 326 42 357 7.49e-15 77.0
MS.gene032852.t1 MTR_5g058000 24.537 432 235 14 3 427 8 355 8.95e-15 75.9
MS.gene032852.t1 MTR_6g088700 26.705 352 225 12 2 341 13 343 1.04e-14 75.9
MS.gene032852.t1 MTR_3g023270 25.272 368 220 11 2 351 11 341 1.14e-14 75.5
MS.gene032852.t1 MTR_2g082880 26.303 422 272 15 2 413 9 401 1.53e-14 75.5
MS.gene032852.t1 MTR_4g050930 27.726 321 199 11 2 312 28 325 1.89e-14 75.1
MS.gene032852.t1 MTR_4g092430 28.783 337 176 16 2 311 42 341 2.16e-14 75.5
MS.gene032852.t1 MTR_4g050930 27.726 321 199 11 2 312 28 325 2.59e-14 75.1
MS.gene032852.t1 MTR_2g072720 24.283 453 287 16 3 429 39 461 3.68e-14 74.7
MS.gene032852.t1 MTR_3g099900 27.794 349 196 11 2 328 17 331 3.70e-14 74.3
MS.gene032852.t1 MTR_4g055990 25.265 471 266 17 3 413 9 453 4.41e-14 74.7
MS.gene032852.t1 MTR_4g055990 25.265 471 266 17 3 413 9 453 4.75e-14 74.3
MS.gene032852.t1 MTR_4g056020 26.835 436 261 17 3 413 9 411 8.60e-14 73.6
MS.gene032852.t1 MTR_1g038760 27.493 371 222 13 2 357 14 352 1.24e-13 72.4
MS.gene032852.t1 MTR_0049s0110 27.273 220 140 8 3 217 8 212 2.25e-13 70.5
MS.gene032852.t1 MTR_8g015830 28.279 244 142 9 2 217 7 245 3.65e-13 71.6
MS.gene032852.t1 MTR_8g015830 28.279 244 142 9 2 217 7 245 3.91e-13 71.6
MS.gene032852.t1 MTR_4g119700 29.439 214 130 6 2 196 5 216 6.36e-13 71.2
MS.gene032852.t1 MTR_3g019200 29.375 320 187 11 2 307 7 301 7.26e-13 70.1
MS.gene032852.t1 MTR_2g007450 30.332 211 114 5 3 190 16 216 8.69e-13 70.1
MS.gene032852.t1 MTR_2g082800 25.776 419 267 14 2 410 26 410 1.02e-12 70.1
MS.gene032852.t1 MTR_8g014260 27.442 430 268 18 2 413 15 418 1.21e-12 70.1
MS.gene032852.t1 MTR_1g038760 27.679 336 201 11 2 326 14 318 1.59e-12 68.9
MS.gene032852.t1 MTR_3g019220 29.794 339 197 12 2 324 25 338 2.31e-12 69.3
MS.gene032852.t1 MTR_2g007500 25.436 401 208 17 3 392 14 334 2.49e-12 68.2
MS.gene032852.t1 MTR_3g108560 24.249 433 224 16 2 419 19 362 2.61e-12 68.6
MS.gene032852.t1 MTR_8g468810 26.190 378 220 16 2 354 24 367 2.65e-12 68.6
MS.gene032852.t1 MTR_5g058100 30.769 195 114 6 3 190 9 189 3.11e-12 68.2
MS.gene032852.t1 MTR_3g105060 31.771 192 115 7 3 190 14 193 3.79e-12 67.8
MS.gene032852.t1 MTR_1g013630 33.498 203 114 6 3 194 39 231 4.33e-12 67.8
MS.gene032852.t1 MTR_2g047848 25.459 436 249 16 3 411 7 393 5.18e-12 67.8
MS.gene032852.t1 MTR_8g018340 30.000 210 125 7 2 195 5 208 5.32e-12 68.2
MS.gene032852.t1 MTR_2g091145 29.279 222 136 5 3 219 21 226 6.35e-12 67.8
MS.gene032852.t1 MTR_3g036250 30.151 199 112 7 3 190 5 187 7.13e-12 67.0
MS.gene032852.t1 MTR_3g023470 27.746 346 197 15 2 326 14 327 7.91e-12 67.0
MS.gene032852.t1 MTR_5g073420 29.534 193 123 5 3 190 11 195 1.15e-11 66.6
MS.gene032852.t1 MTR_3g026920 30.732 205 122 5 1 194 17 212 1.69e-11 66.2
MS.gene032852.t1 MTR_6g040270 32.821 195 112 5 5 193 10 191 1.90e-11 65.9
MS.gene032852.t1 MTR_5g083890 30.332 211 116 7 2 190 5 206 2.50e-11 65.9
MS.gene032852.t1 MTR_6g018660 27.949 390 196 17 3 351 20 365 2.71e-11 65.5
MS.gene032852.t1 MTR_1g021825 24.413 426 261 15 3 413 17 396 2.89e-11 65.5
MS.gene032852.t1 MTR_2g007530 44.944 89 48 1 1 88 17 105 3.10e-11 65.1
MS.gene032852.t1 MTR_1g021820 33.673 196 119 6 3 195 28 215 3.14e-11 65.5
MS.gene032852.t1 MTR_5g073340 31.579 190 95 6 3 191 8 163 4.31e-11 64.3
MS.gene032852.t1 MTR_1g021825 24.413 426 261 15 3 413 88 467 4.46e-11 65.1
MS.gene032852.t1 MTR_4g090940 25.915 328 203 10 2 314 158 460 5.10e-11 65.1
MS.gene032852.t1 MTR_5g073370 29.353 201 114 7 3 191 5 189 5.63e-11 64.3
MS.gene032852.t1 MTR_4g045680 26.606 327 205 11 2 316 15 318 6.59e-11 64.3
MS.gene032852.t1 MTR_2g102420 43.056 72 40 1 285 356 18 88 6.94e-11 58.9
MS.gene032852.t1 MTR_5g087940 24.855 346 228 10 2 342 25 343 7.15e-11 64.3
MS.gene032852.t1 MTR_5g021550 33.784 148 88 5 2 142 18 162 7.53e-11 60.8
MS.gene032852.t1 MTR_7g056433 31.500 200 114 7 2 192 11 196 7.66e-11 63.9
MS.gene032852.t1 MTR_8g465650 25.660 265 166 9 3 251 12 261 8.43e-11 63.9
MS.gene032852.t1 MTR_3g099830 29.688 192 113 5 3 192 12 183 8.54e-11 63.9
MS.gene032852.t1 MTR_1g115245 27.232 224 133 8 2 216 25 227 9.84e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032852.t1 AT3G59210 27.542 472 295 15 2 440 6 463 3.13e-33 131
MS.gene032852.t1 AT3G59210 27.542 472 295 15 2 440 6 463 3.13e-33 131
MS.gene032852.t1 AT3G59210 27.542 472 295 15 2 440 6 463 3.13e-33 131
MS.gene032852.t1 AT3G59210 27.542 472 295 15 2 440 6 463 3.13e-33 131
MS.gene032852.t1 AT3G59210 27.542 472 295 15 2 440 6 463 3.13e-33 131
MS.gene032852.t1 AT4G14096 29.221 462 271 19 2 439 7 436 3.17e-29 119
MS.gene032852.t1 AT4G14096 29.221 462 271 19 2 439 7 436 3.17e-29 119
MS.gene032852.t1 AT1G16930 28.321 399 240 16 3 385 15 383 5.88e-28 115
MS.gene032852.t1 AT1G16930 28.321 399 240 16 3 385 15 383 5.88e-28 115
MS.gene032852.t1 AT1G16930 28.321 399 240 16 3 385 15 383 5.88e-28 115
MS.gene032852.t1 AT4G22280 29.216 421 256 12 3 417 2 386 3.07e-27 113
MS.gene032852.t1 AT3G59160 26.904 394 229 14 2 352 12 389 1.76e-26 111
MS.gene032852.t1 AT3G59230 28.008 482 273 21 2 439 11 462 3.86e-26 110
MS.gene032852.t1 AT3G58860 26.698 427 272 14 3 413 7 408 5.01e-26 110
MS.gene032852.t1 AT4G14103 27.747 364 232 12 2 352 7 352 1.39e-25 108
MS.gene032852.t1 AT4G14103 27.747 364 232 12 2 352 7 352 1.39e-25 108
MS.gene032852.t1 AT3G58960 28.791 455 260 19 3 413 2 436 1.82e-25 108
MS.gene032852.t1 AT4G14103 27.747 364 232 12 2 352 7 352 2.82e-25 108
MS.gene032852.t1 AT3G58900 28.507 442 265 17 3 413 2 423 4.18e-25 107
MS.gene032852.t1 AT4G22280 31.006 358 212 11 3 354 2 330 6.78e-25 105
MS.gene032852.t1 AT2G42730 26.207 435 278 14 2 413 4 418 9.25e-25 106
MS.gene032852.t1 AT1G51370 25.768 423 269 14 2 414 18 405 9.28e-25 106
MS.gene032852.t1 AT3G58880 28.924 446 255 15 1 413 1 417 1.42e-24 106
MS.gene032852.t1 AT3G59200 27.487 382 220 13 2 352 6 361 3.45e-24 103
MS.gene032852.t1 AT3G59200 26.539 471 274 18 2 429 6 447 4.06e-24 105
MS.gene032852.t1 AT2G29930 26.304 441 268 17 2 414 11 422 7.57e-24 103
MS.gene032852.t1 AT2G29930 26.304 441 268 17 2 414 11 422 7.57e-24 103
MS.gene032852.t1 AT5G53840 27.830 424 276 14 2 421 17 414 1.05e-23 103
MS.gene032852.t1 AT3G59170 27.387 398 225 16 2 352 6 386 1.89e-23 102
MS.gene032852.t1 AT5G56420 27.528 356 223 9 2 354 5 328 2.60e-23 102
MS.gene032852.t1 AT5G56420 27.528 356 223 9 2 354 5 328 2.60e-23 102
MS.gene032852.t1 AT5G56420 27.528 356 223 9 2 354 5 328 2.60e-23 102
MS.gene032852.t1 AT5G22720 25.926 432 275 15 2 411 22 430 4.71e-23 101
MS.gene032852.t1 AT4G13985 27.033 455 283 15 3 436 19 445 4.85e-23 101
MS.gene032852.t1 AT5G22730 24.528 424 288 11 2 411 27 432 5.81e-23 101
MS.gene032852.t1 AT5G22730 24.528 424 288 11 2 411 27 432 5.81e-23 101
MS.gene032852.t1 AT1G51370 26.854 391 242 13 2 383 18 373 1.20e-22 100
MS.gene032852.t1 AT5G22660 24.764 424 286 12 2 413 12 414 1.26e-22 100
MS.gene032852.t1 AT3G59190 26.882 372 236 11 2 352 11 367 1.85e-22 99.0
MS.gene032852.t1 AT4G00160 26.998 463 284 15 2 448 15 439 2.17e-22 99.8
MS.gene032852.t1 AT1G58310 27.763 389 222 14 2 352 7 374 3.37e-22 99.4
MS.gene032852.t1 AT3G59190 26.882 372 236 11 2 352 11 367 4.68e-22 99.0
MS.gene032852.t1 AT4G27050 25.000 444 277 15 3 414 4 423 5.08e-22 98.6
MS.gene032852.t1 AT4G27050 25.000 444 277 15 3 414 4 423 5.08e-22 98.6
MS.gene032852.t1 AT4G27050 25.000 444 277 15 3 414 4 423 5.08e-22 98.6
MS.gene032852.t1 AT4G27050 25.000 444 277 15 3 414 4 423 5.08e-22 98.6
MS.gene032852.t1 AT4G27050 25.000 444 277 15 3 414 4 423 5.08e-22 98.6
MS.gene032852.t1 AT5G44950 23.788 433 283 15 2 415 3 407 8.21e-22 97.8
MS.gene032852.t1 AT3G58900 29.878 328 200 12 3 315 2 314 9.35e-22 95.9
MS.gene032852.t1 AT3G59240 26.954 371 224 15 2 352 7 350 1.10e-21 97.8
MS.gene032852.t1 AT1G78750 25.926 432 276 14 3 413 18 426 1.52e-21 97.1
MS.gene032852.t1 AT1G78750 25.926 432 276 14 3 413 18 426 1.52e-21 97.1
MS.gene032852.t1 AT5G22670 26.835 436 266 16 2 416 10 413 1.93e-21 96.7
MS.gene032852.t1 AT3G58900 28.701 331 196 12 3 308 2 317 2.32e-21 95.1
MS.gene032852.t1 AT3G58900 28.701 331 196 12 3 308 2 317 2.32e-21 95.1
MS.gene032852.t1 AT5G25860 26.205 477 282 20 2 448 11 447 3.95e-21 95.9
MS.gene032852.t1 AT5G38396 24.944 449 279 15 3 417 2 426 4.04e-21 95.9
MS.gene032852.t1 AT5G53635 26.712 438 268 17 4 418 1 408 4.17e-21 95.5
MS.gene032852.t1 AT3G03030 25.508 443 281 16 3 413 2 427 8.64e-21 95.1
MS.gene032852.t1 AT1G80470 25.635 394 254 14 3 385 15 380 1.01e-20 94.7
MS.gene032852.t1 AT1G66300 23.077 429 282 12 3 413 29 427 1.27e-20 94.4
MS.gene032852.t1 AT1G32375 24.048 420 281 11 3 414 2 391 1.40e-20 94.0
MS.gene032852.t1 AT1G32375 24.048 420 281 11 3 414 2 391 1.40e-20 94.0
MS.gene032852.t1 AT1G06630 26.316 456 259 14 2 444 11 402 1.54e-20 94.4
MS.gene032852.t1 AT4G13965 31.224 237 147 3 3 239 10 230 2.04e-20 93.6
MS.gene032852.t1 AT3G52680 27.354 446 284 12 2 439 20 433 2.66e-20 93.6
MS.gene032852.t1 AT2G26030 25.000 404 258 15 3 387 4 381 5.66e-20 92.4
MS.gene032852.t1 AT2G26030 25.000 404 258 15 3 387 4 381 5.66e-20 92.4
MS.gene032852.t1 AT2G26030 25.304 411 253 16 3 387 4 386 5.68e-20 92.4
MS.gene032852.t1 AT5G44980 23.776 429 288 14 2 416 3 406 8.59e-20 91.7
MS.gene032852.t1 AT5G44980 23.776 429 288 14 2 416 3 406 8.59e-20 91.7
MS.gene032852.t1 AT3G59250 25.885 452 265 20 2 434 6 406 8.81e-20 91.7
MS.gene032852.t1 AT3G50710 27.654 358 221 9 3 354 2 327 9.45e-20 91.7
MS.gene032852.t1 AT1G51370 25.978 358 227 11 2 356 18 340 1.03e-19 90.5
MS.gene032852.t1 AT1G78760 23.944 426 281 14 2 413 15 411 1.08e-19 91.7
MS.gene032852.t1 AT4G13960 26.577 444 263 17 3 413 2 415 1.14e-19 91.7
MS.gene032852.t1 AT4G13960 26.577 444 263 17 3 413 2 415 1.14e-19 91.7
MS.gene032852.t1 AT1G55030 26.744 430 263 14 3 421 19 407 1.18e-19 91.3
MS.gene032852.t1 AT1G06630 27.747 364 225 12 2 352 11 349 1.31e-19 90.5
MS.gene032852.t1 AT1G06630 27.747 364 225 12 2 352 11 349 1.31e-19 90.5
MS.gene032852.t1 AT3G26922 30.224 268 166 7 2 265 13 263 1.33e-19 89.4
MS.gene032852.t1 AT3G26922 30.224 268 166 7 2 265 13 263 1.33e-19 89.4
MS.gene032852.t1 AT1G66290 24.286 420 284 11 3 414 29 422 1.68e-19 90.9
MS.gene032852.t1 AT1G55030 26.047 430 266 13 3 421 9 397 1.74e-19 90.9
MS.gene032852.t1 AT3G52680 32.959 267 162 7 2 266 20 271 1.77e-19 90.1
MS.gene032852.t1 AT1G06630 27.747 364 225 12 2 352 20 358 1.80e-19 90.5
MS.gene032852.t1 AT1G06630 26.603 421 240 13 2 409 11 375 1.96e-19 90.5
MS.gene032852.t1 AT1G06630 26.603 421 240 13 2 409 11 375 1.96e-19 90.5
MS.gene032852.t1 AT1G06630 26.603 421 240 13 2 409 11 375 1.96e-19 90.5
MS.gene032852.t1 AT1G06630 26.603 421 240 13 2 409 11 375 1.96e-19 90.5
MS.gene032852.t1 AT4G00320 27.174 368 242 12 2 352 12 370 3.25e-19 90.5
MS.gene032852.t1 AT1G69630 25.229 436 267 16 3 413 18 419 3.69e-19 90.1
MS.gene032852.t1 AT1G55660 32.780 241 145 7 3 239 53 280 4.16e-19 89.0
MS.gene032852.t1 AT5G22700 24.658 438 291 14 3 426 6 418 5.86e-19 89.4
MS.gene032852.t1 AT5G22700 24.658 438 291 14 3 426 6 418 5.86e-19 89.4
MS.gene032852.t1 AT5G22700 24.658 438 291 14 3 426 6 418 5.86e-19 89.4
MS.gene032852.t1 AT5G22700 24.658 438 291 14 3 426 6 418 5.86e-19 89.4
MS.gene032852.t1 AT5G22700 24.658 438 291 14 3 426 43 455 7.76e-19 89.0
MS.gene032852.t1 AT5G41840 27.056 377 240 14 3 352 14 382 9.82e-19 89.0
MS.gene032852.t1 AT1G55660 32.780 241 145 7 3 239 53 280 1.22e-18 88.6
MS.gene032852.t1 AT2G42720 27.955 440 259 17 3 413 2 412 1.33e-18 88.2
MS.gene032852.t1 AT2G04230 25.885 452 286 16 2 436 12 431 1.36e-18 88.2
MS.gene032852.t1 AT4G00315 31.429 245 155 5 3 245 2 235 1.41e-18 88.2
MS.gene032852.t1 AT3G28410 25.376 465 283 18 3 442 28 453 1.59e-18 88.2
MS.gene032852.t1 AT5G41830 26.303 422 268 14 2 389 12 424 1.69e-18 88.2
MS.gene032852.t1 AT3G58940 24.885 434 270 18 3 413 2 402 1.92e-18 88.6
MS.gene032852.t1 AT3G58940 24.885 434 270 18 3 413 2 402 1.92e-18 88.6
MS.gene032852.t1 AT3G58980 26.786 448 273 18 3 421 2 423 2.09e-18 88.2
MS.gene032852.t1 AT3G58920 25.877 456 274 15 3 414 2 437 2.23e-18 87.8
MS.gene032852.t1 AT1G78730 23.776 429 263 15 3 421 22 396 2.54e-18 87.0
MS.gene032852.t1 AT2G26860 28.333 360 219 11 3 354 2 330 3.71e-18 86.7
MS.gene032852.t1 AT2G26860 28.333 360 219 11 3 354 2 330 3.71e-18 86.7
MS.gene032852.t1 AT3G49040 30.800 250 136 9 2 239 16 240 6.81e-18 84.7
MS.gene032852.t1 AT3G03040 26.685 371 234 12 3 352 2 355 7.41e-18 86.3
MS.gene032852.t1 AT5G38590 26.374 455 266 17 3 439 2 405 7.44e-18 85.9
MS.gene032852.t1 AT4G10400 28.213 319 201 7 3 319 2 294 1.05e-17 85.1
MS.gene032852.t1 AT4G10400 28.213 319 201 7 3 319 2 294 1.05e-17 85.1
MS.gene032852.t1 AT4G10400 28.213 319 201 7 3 319 2 294 1.05e-17 85.1
MS.gene032852.t1 AT5G27750 22.462 463 313 13 3 435 5 451 1.18e-17 85.5
MS.gene032852.t1 AT5G18770 27.072 362 229 10 2 350 23 362 1.20e-17 84.7
MS.gene032852.t1 AT3G03030 26.852 324 205 10 3 303 2 316 1.64e-17 84.0
MS.gene032852.t1 AT5G38590 32.420 219 129 4 3 216 2 206 1.84e-17 82.8
MS.gene032852.t1 AT1G52650 23.285 481 292 17 3 436 2 452 2.54e-17 84.3
MS.gene032852.t1 AT3G59000 27.416 445 267 17 3 413 2 424 3.60e-17 84.0
MS.gene032852.t1 AT5G18770 27.072 362 229 10 2 350 23 362 3.60e-17 84.0
MS.gene032852.t1 AT3G58930 25.390 449 280 17 3 413 2 433 3.62e-17 84.0
MS.gene032852.t1 AT3G58930 25.390 449 280 17 3 413 2 433 3.62e-17 84.0
MS.gene032852.t1 AT3G58930 25.390 449 280 17 3 413 2 433 3.62e-17 84.0
MS.gene032852.t1 AT3G44060 24.648 426 282 15 8 421 4 402 4.05e-17 83.6
MS.gene032852.t1 AT5G56820 25.392 319 199 10 3 313 15 302 5.01e-17 83.6
MS.gene032852.t1 AT4G09920 32.127 221 139 6 3 221 2 213 9.97e-17 81.3
MS.gene032852.t1 AT4G09920 32.127 221 139 6 3 221 2 213 9.97e-17 81.3
MS.gene032852.t1 AT4G09920 32.127 221 139 6 3 221 2 213 1.00e-16 80.9
MS.gene032852.t1 AT4G09920 32.127 221 139 6 3 221 2 213 1.00e-16 80.9
MS.gene032852.t1 AT4G09920 32.127 221 139 6 3 221 2 213 1.00e-16 80.9
MS.gene032852.t1 AT1G78840 26.340 429 274 17 2 415 4 405 1.04e-16 82.4
MS.gene032852.t1 AT1G78840 26.340 429 274 17 2 415 4 405 1.04e-16 82.4
MS.gene032852.t1 AT5G22660 24.516 310 213 6 2 303 12 308 1.08e-16 81.3
MS.gene032852.t1 AT1G66320 23.148 432 276 15 7 417 34 430 1.93e-16 81.6
MS.gene032852.t1 AT5G02700 27.619 315 181 11 3 305 27 306 2.00e-16 81.6
MS.gene032852.t1 AT1G66310 24.942 433 269 16 3 415 19 415 4.69e-16 80.5
MS.gene032852.t1 AT5G56390 25.495 404 258 11 21 413 21 392 5.42e-16 80.1
MS.gene032852.t1 AT3G59180 27.679 224 130 5 139 352 122 323 5.88e-16 80.5
MS.gene032852.t1 AT3G44810 25.349 430 289 17 8 422 12 424 6.60e-16 80.1
MS.gene032852.t1 AT1G13780 24.569 464 299 18 3 437 10 451 8.09e-16 79.7
MS.gene032852.t1 AT5G38390 26.077 441 264 20 3 413 2 410 9.95e-16 79.7
MS.gene032852.t1 AT1G21990 25.442 452 265 18 2 413 8 427 1.31e-15 79.3
MS.gene032852.t1 AT5G60610 25.943 424 264 11 3 414 2 387 1.42e-15 78.6
MS.gene032852.t1 AT5G60610 25.943 424 264 11 3 414 2 387 1.42e-15 78.6
MS.gene032852.t1 AT3G26922 28.195 266 149 5 2 265 13 238 2.49e-15 76.6
MS.gene032852.t1 AT1G56610 26.992 389 248 14 2 374 72 440 2.99e-15 78.2
MS.gene032852.t1 AT3G49030 25.918 463 271 21 2 442 20 432 3.11e-15 77.8
MS.gene032852.t1 AT1G60400 24.107 336 215 10 3 324 14 323 3.20e-15 77.8
MS.gene032852.t1 AT1G56610 26.992 389 248 14 2 374 9 377 4.12e-15 77.8
MS.gene032852.t1 AT5G02930 32.161 199 109 8 3 196 28 205 4.59e-15 77.4
MS.gene032852.t1 AT5G56810 29.752 242 150 7 3 239 15 241 5.24e-15 75.9
MS.gene032852.t1 AT1G48400 22.863 468 286 16 2 414 9 456 6.62e-15 77.0
MS.gene032852.t1 AT5G35995 26.517 445 273 16 2 414 4 426 6.67e-15 77.0
MS.gene032852.t1 AT5G35995 26.517 445 273 16 2 414 4 426 6.67e-15 77.0
MS.gene032852.t1 AT3G26930 26.685 356 224 10 2 354 20 341 7.34e-15 77.0
MS.gene032852.t1 AT3G58930 24.263 441 261 15 3 413 2 399 7.51e-15 76.6
MS.gene032852.t1 AT3G58930 24.263 441 261 15 3 413 2 399 7.51e-15 76.6
MS.gene032852.t1 AT3G26922 29.084 251 157 7 19 265 1 234 9.14e-15 74.7
MS.gene032852.t1 AT3G26922 29.084 251 157 7 19 265 1 234 9.14e-15 74.7
MS.gene032852.t1 AT5G56410 26.750 400 234 14 10 381 10 378 1.39e-14 76.3
MS.gene032852.t1 AT5G22730 24.054 370 249 11 2 357 27 378 1.64e-14 75.5
MS.gene032852.t1 AT3G51530 25.905 359 222 12 2 354 29 349 1.71e-14 75.9
MS.gene032852.t1 AT5G44960 22.118 425 269 17 3 411 5 383 1.79e-14 75.5
MS.gene032852.t1 AT5G56810 29.752 242 150 7 3 239 15 241 2.12e-14 75.5
MS.gene032852.t1 AT1G64540 26.074 349 200 14 2 324 4 320 2.58e-14 75.1
MS.gene032852.t1 AT1G64540 26.074 349 200 14 2 324 4 320 2.58e-14 75.1
MS.gene032852.t1 AT1G16940 22.871 411 273 12 3 410 11 380 3.97e-14 74.3
MS.gene032852.t1 AT5G02910 26.129 310 201 8 3 309 11 295 4.37e-14 73.9
MS.gene032852.t1 AT5G02910 26.129 310 201 8 3 309 11 295 4.55e-14 73.6
MS.gene032852.t1 AT3G14710 25.059 423 274 11 2 414 25 414 4.84e-14 74.3
MS.gene032852.t1 AT5G02910 26.542 373 233 11 3 364 11 353 5.39e-14 74.3
MS.gene032852.t1 AT5G22610 26.139 417 252 19 1 387 16 406 5.65e-14 74.3
MS.gene032852.t1 AT5G38570 29.630 216 101 5 3 215 2 169 6.17e-14 73.6
MS.gene032852.t1 AT5G44490 22.936 436 282 18 2 413 16 421 1.28e-13 73.2
MS.gene032852.t1 AT2G29910 25.852 352 201 14 2 321 4 327 1.33e-13 72.4
MS.gene032852.t1 AT2G29910 25.852 352 201 14 2 321 4 327 1.33e-13 72.4
MS.gene032852.t1 AT2G29910 25.852 352 201 14 2 321 4 327 1.33e-13 72.4
MS.gene032852.t1 AT2G29910 25.852 352 201 14 2 321 4 327 1.33e-13 72.4
MS.gene032852.t1 AT5G44490 22.936 436 282 18 2 413 16 421 1.37e-13 73.2
MS.gene032852.t1 AT2G29910 25.915 355 203 14 2 324 28 354 1.83e-13 72.0
MS.gene032852.t1 AT5G56440 25.576 434 262 16 3 413 2 397 2.02e-13 72.4
MS.gene032852.t1 AT1G06630 26.518 313 194 11 2 301 11 300 2.20e-13 71.2
MS.gene032852.t1 AT3G49020 24.947 469 263 17 2 438 21 432 2.68e-13 72.0
MS.gene032852.t1 AT5G56370 33.511 188 112 5 3 188 2 178 2.90e-13 70.9
MS.gene032852.t1 AT2G29930 26.241 282 168 12 158 414 36 302 3.61e-13 70.9
MS.gene032852.t1 AT1G80960 25.486 463 285 22 3 438 11 440 4.04e-13 71.2
MS.gene032852.t1 AT5G15620 24.661 442 281 17 3 421 2 414 4.09e-13 71.2
MS.gene032852.t1 AT3G59150 24.561 456 270 17 3 413 13 439 4.53e-13 71.2
MS.gene032852.t1 AT5G44980 24.194 310 203 10 2 297 3 294 4.83e-13 70.1
MS.gene032852.t1 AT5G44980 24.194 310 203 10 2 297 3 294 4.83e-13 70.1
MS.gene032852.t1 AT1G80960 25.486 463 285 22 3 438 50 479 4.86e-13 71.2
MS.gene032852.t1 AT1G80960 25.486 463 285 22 3 438 50 479 4.86e-13 71.2
MS.gene032852.t1 AT1G80960 25.486 463 285 22 3 438 50 479 4.86e-13 71.2
MS.gene032852.t1 AT3G60040 25.216 464 265 18 2 429 12 429 5.80e-13 71.2
MS.gene032852.t1 AT3G42770 24.550 444 258 14 8 421 4 400 6.16e-13 71.2
MS.gene032852.t1 AT5G56370 33.511 188 112 5 3 188 2 178 6.31e-13 70.9
MS.gene032852.t1 AT5G56370 33.511 188 112 5 3 188 2 178 6.31e-13 70.9
MS.gene032852.t1 AT3G60040 25.216 464 265 18 2 429 231 648 6.54e-13 71.6
MS.gene032852.t1 AT3G60040 25.216 464 265 18 2 429 229 646 6.78e-13 71.2
MS.gene032852.t1 AT4G03220 24.872 390 237 14 3 357 24 392 6.82e-13 70.9
MS.gene032852.t1 AT1G56610 28.814 295 186 11 93 374 55 338 6.89e-13 70.5
MS.gene032852.t1 AT3G60040 25.216 464 265 18 2 429 232 649 6.90e-13 71.2
MS.gene032852.t1 AT3G60040 25.216 464 265 18 2 429 231 648 7.89e-13 70.9
MS.gene032852.t1 AT3G49030 27.492 331 190 13 2 316 20 316 8.82e-13 70.1
MS.gene032852.t1 AT1G60410 24.365 394 262 14 2 385 9 376 1.49e-12 69.3
MS.gene032852.t1 AT5G56690 28.384 229 148 7 5 226 4 223 1.83e-12 69.3
MS.gene032852.t1 AT5G22700 22.791 430 268 11 3 426 43 414 2.78e-12 68.9
MS.gene032852.t1 AT5G41630 23.256 430 274 17 2 389 11 426 2.96e-12 68.9
MS.gene032852.t1 AT5G27750 21.965 346 233 11 3 324 5 337 4.44e-12 67.8
MS.gene032852.t1 AT1G80960 29.478 268 160 14 3 252 50 306 6.15e-12 67.4
MS.gene032852.t1 AT5G22610 26.406 409 231 21 1 387 16 376 8.67e-12 67.4
MS.gene032852.t1 AT1G80960 29.478 268 160 14 3 252 50 306 8.85e-12 67.4
MS.gene032852.t1 AT5G03100 27.879 330 190 16 3 320 9 302 9.67e-12 66.2
MS.gene032852.t1 AT5G03100 27.879 330 190 16 3 320 9 302 9.67e-12 66.2
MS.gene032852.t1 AT3G26930 24.924 329 210 10 29 354 2 296 1.27e-11 66.6
MS.gene032852.t1 AT5G02920 31.553 206 98 10 3 195 28 203 1.33e-11 65.1
MS.gene032852.t1 AT5G56380 24.249 433 289 14 3 420 2 410 1.66e-11 66.2
MS.gene032852.t1 AT5G56380 24.249 433 289 14 3 420 2 410 1.66e-11 66.2
MS.gene032852.t1 AT5G56800 25.094 267 154 9 158 409 76 311 2.98e-11 65.1
MS.gene032852.t1 AT1G13570 25.000 436 257 18 3 421 6 388 4.06e-11 65.1
MS.gene032852.t1 AT1G13570 25.000 436 257 18 3 421 6 388 4.06e-11 65.1
MS.gene032852.t1 AT5G50270 23.832 428 276 14 3 414 2 395 4.17e-11 65.1
MS.gene032852.t1 AT2G29910 27.237 257 151 9 2 246 4 236 6.21e-11 63.9
MS.gene032852.t1 AT2G29910 27.237 257 151 9 2 246 4 236 6.21e-11 63.9
MS.gene032852.t1 AT4G15060 29.954 217 146 3 3 218 172 383 7.90e-11 64.7

Find 56 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAACTCGTTCGGGGTTTA+TGG 0.105473 5.4:+29624086 MS.gene032852:CDS
ATACCAAGAACTTCCAATTT+AGG 0.233465 5.4:-29624150 None:intergenic
GAGCTATTGAGTGCACTTAA+AGG 0.248375 5.4:+29623805 MS.gene032852:CDS
TCTACACAAGACTCCTAAAT+TGG 0.263368 5.4:+29624137 MS.gene032852:CDS
TGATCTTGTATAAATGTATT+TGG 0.271542 5.4:+29623524 MS.gene032852:CDS
ATCAGATACTTTGGAGGAAT+TGG 0.277910 5.4:+29624466 MS.gene032852:CDS
TCACTCTAGCTCTTCTTGTT+TGG 0.289191 5.4:+29623600 MS.gene032852:CDS
TCCATTGTTGATGCAAATAT+TGG 0.301151 5.4:+29623730 MS.gene032852:CDS
ACTCCTAAATTGGAAGTTCT+TGG 0.316157 5.4:+29624147 MS.gene032852:CDS
GCAAAGCCTTTCTATGTGAT+TGG 0.327393 5.4:-29623188 None:intergenic
TGAGTCAAATCTCGAAAATA+AGG 0.329808 5.4:+29623117 MS.gene032852:CDS
CTACCAAAAGACTCATCATT+TGG 0.337795 5.4:-29624394 None:intergenic
TGAAGTTCTAACCGCCTCTT+TGG 0.344605 5.4:-29623020 None:intergenic
CATCTTTACATAACTCGTTC+GGG 0.346943 5.4:+29624078 MS.gene032852:CDS
GCACGATATTGTTCGCTTTG+TGG 0.348517 5.4:-29623769 None:intergenic
CTATTGAAAGTTCCACATTA+AGG 0.351392 5.4:+29623566 MS.gene032852:CDS
GGTAGAAAAGACTACAATCT+TGG 0.366681 5.4:+29624412 MS.gene032852:CDS
AGTCCAAATGATGAGTCTTT+TGG 0.384646 5.4:+29624391 MS.gene032852:CDS
CAAGTTAAGGACAAAATATT+CGG 0.400277 5.4:-29623664 None:intergenic
ACATCTTTACATAACTCGTT+CGG 0.401772 5.4:+29624077 MS.gene032852:CDS
AATATTGGTCTTGAGTTTGA+TGG 0.420467 5.4:+29623745 MS.gene032852:CDS
CGGAGTGCTTGTGCAAGTTA+AGG 0.430331 5.4:-29623677 None:intergenic
TTCCATCACGAACATACAAA+AGG 0.445570 5.4:-29623399 None:intergenic
GGAAGTTCTTGGTATTCCTA+TGG 0.453099 5.4:+29624158 MS.gene032852:CDS
TCGAGATTTGACTCATAAAG+AGG 0.458959 5.4:-29623109 None:intergenic
ACAAATCCAATCACATAGAA+AGG 0.494907 5.4:+29623182 MS.gene032852:CDS
ATATAATGAAGAATGACATC+AGG 0.497527 5.4:-29622980 None:intergenic
AGATACTTTGGAGGAATTGG+AGG 0.511109 5.4:+29624469 MS.gene032852:CDS
GGGAAAGCTGATAAACAGTT+GGG 0.511215 5.4:-29623343 None:intergenic
TGTGGAACAAAGGAAGGAGA+TGG 0.517028 5.4:-29624047 None:intergenic
ACAAGAAGAGCTAGAGTGAA+TGG 0.517753 5.4:-29623596 None:intergenic
GTCTTTCCACAAGATCTAAG+AGG 0.527819 5.4:-29623153 None:intergenic
AAGATCAACTCTTCTAGCAT+AGG 0.531459 5.4:-29623508 None:intergenic
AGATCAACTCTTCTAGCATA+GGG 0.535833 5.4:-29623507 None:intergenic
TAACTGCCTCTTAGATCTTG+TGG 0.535929 5.4:+29623147 MS.gene032852:CDS
TCCATCACGAACATACAAAA+GGG 0.537973 5.4:-29623398 None:intergenic
ACCAATATTTGCATCAACAA+TGG 0.542438 5.4:-29623731 None:intergenic
TTTGACTCATAAAGAGGATG+AGG 0.545300 5.4:-29623103 None:intergenic
TTCTTTACTCTCAACCAAAG+AGG 0.562637 5.4:+29623006 MS.gene032852:CDS
TTTGCATCAACAATGGAGAT+CGG 0.564211 5.4:-29623724 None:intergenic
CAATTGCAATCTTTAAGTCA+CGG 0.565804 5.4:+29624512 MS.gene032852:CDS
TGTAAAGATGTGTCAAGTTG+TGG 0.569486 5.4:-29624065 None:intergenic
AGGGAAAGCTGATAAACAGT+TGG 0.569974 5.4:-29623344 None:intergenic
TGTGTCAAGTTGTGGAACAA+AGG 0.579386 5.4:-29624057 None:intergenic
TCAAGTTGTGGAACAAAGGA+AGG 0.583398 5.4:-29624053 None:intergenic
AAAACAACTTCTTCAGTGAA+GGG 0.587985 5.4:-29623363 None:intergenic
AGAAAAGACTACAATCTTGG+AGG 0.595886 5.4:+29624415 MS.gene032852:CDS
ATCTTTACATAACTCGTTCG+GGG 0.632593 5.4:+29624079 MS.gene032852:CDS
AGAGAAGATTTGAAACAACA+AGG 0.637655 5.4:-29624326 None:intergenic
AATGGTCAATGTCCTTAATG+TGG 0.642253 5.4:-29623578 None:intergenic
GTCCACAAGTATCTCCACCT+TGG 0.648671 5.4:-29623052 None:intergenic
GAACTTCAATATTATCACCA+AGG 0.650314 5.4:+29623035 MS.gene032852:CDS
TTTACTCTCAACCAAAGAGG+CGG 0.653818 5.4:+29623009 MS.gene032852:CDS
CACCAAGGTGGAGATACTTG+TGG 0.658749 5.4:+29623050 MS.gene032852:CDS
CTTCAATATTATCACCAAGG+TGG 0.673989 5.4:+29623038 MS.gene032852:CDS
CAATGGAGATCGGATTAACG+AGG 0.712213 5.4:-29623714 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTATTTATTATTTCTTATTT+AGG + chr5.4:29624256-29624275 MS.gene032852:intron 10.0%
!! TGATCTTGTATAAATGTATT+TGG + chr5.4:29623524-29623543 MS.gene032852:CDS 20.0%
!!! CTTTACATTTCAGATTTTAA+TGG + chr5.4:29624356-29624375 MS.gene032852:CDS 20.0%
! ATATAATGAAGAATGACATC+AGG - chr5.4:29622983-29623002 None:intergenic 25.0%
! CAAGATATAAGATATACCAT+AGG - chr5.4:29624177-29624196 None:intergenic 25.0%
! CAAGTTAAGGACAAAATATT+CGG - chr5.4:29623667-29623686 None:intergenic 25.0%
! GTATATCTTATATCTTGACT+TGG + chr5.4:29624180-29624199 MS.gene032852:intron 25.0%
!! ATTTTTATCAGATACTTTGG+AGG + chr5.4:29624460-29624479 MS.gene032852:CDS 25.0%
!! TTAGGTATTTTGCTTACATT+TGG + chr5.4:29624274-29624293 MS.gene032852:intron 25.0%
!!! AAGAAGTTGTTTTTACAACT+TGG + chr5.4:29623373-29623392 MS.gene032852:CDS 25.0%
!!! AGAAGTTGTTTTTACAACTT+GGG + chr5.4:29623374-29623393 MS.gene032852:CDS 25.0%
AAAAACAACTTCTTCAGTGA+AGG - chr5.4:29623367-29623386 None:intergenic 30.0%
AAAACAACTTCTTCAGTGAA+GGG - chr5.4:29623366-29623385 None:intergenic 30.0%
ACAAATCCAATCACATAGAA+AGG + chr5.4:29623182-29623201 MS.gene032852:CDS 30.0%
ACATCTTTACATAACTCGTT+CGG + chr5.4:29624077-29624096 MS.gene032852:CDS 30.0%
ACCAATATTTGCATCAACAA+TGG - chr5.4:29623734-29623753 None:intergenic 30.0%
ATACCAAGAACTTCCAATTT+AGG - chr5.4:29624153-29624172 None:intergenic 30.0%
ATCTGATAAAAATCCCGAAA+AGG - chr5.4:29624453-29624472 None:intergenic 30.0%
CAATTGCAATCTTTAAGTCA+CGG + chr5.4:29624512-29624531 MS.gene032852:CDS 30.0%
CTAAATGCAACAATGTCAAT+AGG - chr5.4:29623925-29623944 None:intergenic 30.0%
CTATTGAAAGTTCCACATTA+AGG + chr5.4:29623566-29623585 MS.gene032852:CDS 30.0%
GAACTTCAATATTATCACCA+AGG + chr5.4:29623035-29623054 MS.gene032852:CDS 30.0%
TATCACGCAATAATCGATAT+TGG + chr5.4:29623981-29624000 MS.gene032852:intron 30.0%
TCCATTGTTGATGCAAATAT+TGG + chr5.4:29623730-29623749 MS.gene032852:CDS 30.0%
TGAGTCAAATCTCGAAAATA+AGG + chr5.4:29623117-29623136 MS.gene032852:CDS 30.0%
! AGAGAAGATTTGAAACAACA+AGG - chr5.4:29624329-29624348 None:intergenic 30.0%
! GAAATGAAGATATCCTTTTC+GGG + chr5.4:29624437-29624456 MS.gene032852:CDS 30.0%
! GGAAATGAAGATATCCTTTT+CGG + chr5.4:29624436-29624455 MS.gene032852:CDS 30.0%
! GGGATTTTTATCAGATACTT+TGG + chr5.4:29624457-29624476 MS.gene032852:CDS 30.0%
! TATGACAAGTGATACTTTTC+AGG + chr5.4:29623843-29623862 MS.gene032852:CDS 30.0%
!! AATATTGGTCTTGAGTTTGA+TGG + chr5.4:29623745-29623764 MS.gene032852:CDS 30.0%
AAGATCAACTCTTCTAGCAT+AGG - chr5.4:29623511-29623530 None:intergenic 35.0%
AATGGTCAATGTCCTTAATG+TGG - chr5.4:29623581-29623600 None:intergenic 35.0%
ACTCCTAAATTGGAAGTTCT+TGG + chr5.4:29624147-29624166 MS.gene032852:CDS 35.0%
AGAAAAGACTACAATCTTGG+AGG + chr5.4:29624415-29624434 MS.gene032852:CDS 35.0%
AGATCAACTCTTCTAGCATA+GGG - chr5.4:29623510-29623529 None:intergenic 35.0%
ATCTTTACATAACTCGTTCG+GGG + chr5.4:29624079-29624098 MS.gene032852:CDS 35.0%
CATCTTTACATAACTCGTTC+GGG + chr5.4:29624078-29624097 MS.gene032852:CDS 35.0%
CTACCAAAAGACTCATCATT+TGG - chr5.4:29624397-29624416 None:intergenic 35.0%
CTTCAATATTATCACCAAGG+TGG + chr5.4:29623038-29623057 MS.gene032852:CDS 35.0%
GGTAGAAAAGACTACAATCT+TGG + chr5.4:29624412-29624431 MS.gene032852:CDS 35.0%
TCCATCACGAACATACAAAA+GGG - chr5.4:29623401-29623420 None:intergenic 35.0%
TCGAGATTTGACTCATAAAG+AGG - chr5.4:29623112-29623131 None:intergenic 35.0%
TCTACACAAGACTCCTAAAT+TGG + chr5.4:29624137-29624156 MS.gene032852:CDS 35.0%
TTCCATCACGAACATACAAA+AGG - chr5.4:29623402-29623421 None:intergenic 35.0%
TTCTTTACTCTCAACCAAAG+AGG + chr5.4:29623006-29623025 MS.gene032852:CDS 35.0%
TTTGACTCATAAAGAGGATG+AGG - chr5.4:29623106-29623125 None:intergenic 35.0%
TTTGCATCAACAATGGAGAT+CGG - chr5.4:29623727-29623746 None:intergenic 35.0%
! AGTCCAAATGATGAGTCTTT+TGG + chr5.4:29624391-29624410 MS.gene032852:CDS 35.0%
! ATCAGATACTTTGGAGGAAT+TGG + chr5.4:29624466-29624485 MS.gene032852:CDS 35.0%
! GGTATTTTGCTTACATTTGG+CGG + chr5.4:29624277-29624296 MS.gene032852:intron 35.0%
! TGTAAAGATGTGTCAAGTTG+TGG - chr5.4:29624068-29624087 None:intergenic 35.0%
!! ACGAGGACAAATTTTAGTGT+CGG - chr5.4:29623700-29623719 None:intergenic 35.0%
!! CCACTAGAGTCTTTACTTTT+CGG + chr5.4:29624014-29624033 MS.gene032852:intron 35.0%
ACAAGAAGAGCTAGAGTGAA+TGG - chr5.4:29623599-29623618 None:intergenic 40.0%
AGGGAAAGCTGATAAACAGT+TGG - chr5.4:29623347-29623366 None:intergenic 40.0%
CCGAAAAGTAAAGACTCTAG+TGG - chr5.4:29624017-29624036 None:intergenic 40.0%
GAGCTATTGAGTGCACTTAA+AGG + chr5.4:29623805-29623824 MS.gene032852:CDS 40.0%
GCAAAGCCTTTCTATGTGAT+TGG - chr5.4:29623191-29623210 None:intergenic 40.0%
GGAAGTTCTTGGTATTCCTA+TGG + chr5.4:29624158-29624177 MS.gene032852:CDS 40.0%
GGGAAAGCTGATAAACAGTT+GGG - chr5.4:29623346-29623365 None:intergenic 40.0%
GTCTTTCCACAAGATCTAAG+AGG - chr5.4:29623156-29623175 None:intergenic 40.0%
TAACTGCCTCTTAGATCTTG+TGG + chr5.4:29623147-29623166 MS.gene032852:CDS 40.0%
TTTACTCTCAACCAAAGAGG+CGG + chr5.4:29623009-29623028 MS.gene032852:CDS 40.0%
! AGATACTTTGGAGGAATTGG+AGG + chr5.4:29624469-29624488 MS.gene032852:CDS 40.0%
! CAGTGCAACAACTTTTCTCT+GGG + chr5.4:29623482-29623501 MS.gene032852:CDS 40.0%
! TCAAGTTGTGGAACAAAGGA+AGG - chr5.4:29624056-29624075 None:intergenic 40.0%
! TCAGTGCAACAACTTTTCTC+TGG + chr5.4:29623481-29623500 MS.gene032852:CDS 40.0%
! TCCCTTTTGTATGTTCGTGA+TGG + chr5.4:29623397-29623416 MS.gene032852:CDS 40.0%
! TGTGTCAAGTTGTGGAACAA+AGG - chr5.4:29624060-29624079 None:intergenic 40.0%
!! CTAGAGTCTTTACTTTTCGG+CGG + chr5.4:29624017-29624036 MS.gene032852:intron 40.0%
!! TCACTCTAGCTCTTCTTGTT+TGG + chr5.4:29623600-29623619 MS.gene032852:CDS 40.0%
CAATGGAGATCGGATTAACG+AGG - chr5.4:29623717-29623736 None:intergenic 45.0%
CATAACTCGTTCGGGGTTTA+TGG + chr5.4:29624086-29624105 MS.gene032852:CDS 45.0%
GCACGATATTGTTCGCTTTG+TGG - chr5.4:29623772-29623791 None:intergenic 45.0%
TGTGGAACAAAGGAAGGAGA+TGG - chr5.4:29624050-29624069 None:intergenic 45.0%
! TGAAGTTCTAACCGCCTCTT+TGG - chr5.4:29623023-29623042 None:intergenic 45.0%
CACCAAGGTGGAGATACTTG+TGG + chr5.4:29623050-29623069 MS.gene032852:CDS 50.0%
GTCCACAAGTATCTCCACCT+TGG - chr5.4:29623055-29623074 None:intergenic 50.0%
! CGGAGTGCTTGTGCAAGTTA+AGG - chr5.4:29623680-29623699 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 29622956 29624559 29622956 ID=MS.gene032852
chr5.4 mRNA 29622956 29624559 29622956 ID=MS.gene032852.t1;Parent=MS.gene032852
chr5.4 exon 29622956 29623864 29622956 ID=MS.gene032852.t1.exon1;Parent=MS.gene032852.t1
chr5.4 CDS 29622956 29623864 29622956 ID=cds.MS.gene032852.t1;Parent=MS.gene032852.t1
chr5.4 exon 29624021 29624179 29624021 ID=MS.gene032852.t1.exon2;Parent=MS.gene032852.t1
chr5.4 CDS 29624021 29624179 29624021 ID=cds.MS.gene032852.t1;Parent=MS.gene032852.t1
chr5.4 exon 29624278 29624559 29624278 ID=MS.gene032852.t1.exon3;Parent=MS.gene032852.t1
chr5.4 CDS 29624278 29624559 29624278 ID=cds.MS.gene032852.t1;Parent=MS.gene032852.t1
Gene Sequence

>MS.gene032852

ATGAAAGATATGATAAGCAACATGCCTGATGTCATTCTTCATTATATTCTTTCTTTACTCTCAACCAAAGAGGCGGTTAGAACTTCAATATTATCACCAAGGTGGAGATACTTGTGGACTCAGTTATCTGTCTTTGAATTTAAAATTCCTCATCCTCTTTATGAGTCAAATCTCGAAAATAAGGACTCAGCTAACTGCCTCTTAGATCTTGTGGAAAGACTACTACACAAATCCAATCACATAGAAAGGCTTTGCATTGAAATACTTAAAATAACTGTTGATGCTAACAAATTTACTTCTTTAGTATCTTCTGCAGCAAAGCACAATGTACATGATCTTCAACTTTCAATAGATGATAAAAAATATCTAGATACGATATTTGTGTTACCCAACTGTTTATCAGCTTTCCCTTCACTGAAGAAGTTGTTTTTACAACTTGGGTCCCTTTTGTATGTTCGTGATGGAATTTGTTTCTCTAATCTGAAGACGTTAAATCTTTCAGATGTTAGATTTGTAGATGAGAAGTCAGTGCAACAACTTTTCTCTGGGTGCCCTATGCTAGAAGAGTTGATCTTGTATAAATGTATTTGGCAGTGCATAAACGAGATCACTATTGAAAGTTCCACATTAAGGACATTGACCATTCACTCTAGCTCTTCTTGTTTGGATTATGATCATTATGACTCTTGTACAATTAAGATTAATGCTCCGAATATTTTGTCCTTAACTTGCACAAGCACTCCGACACTAAAATTTGTCCTCGTTAATCCGATCTCCATTGTTGATGCAAATATTGGTCTTGAGTTTGATGGTCCACAAAGCGAACAATATCGTGCTGAGTGTGTATTTGAGCTATTGAGTGCACTTAAAGGTGTGAAGTCTCTCACTATGACAAGTGATACTTTTCAGGTATGTTTGTTAGTTTTCTCGTCATTTTCATTTTCTTTAGTATATTTAGAAGTGATGCCTATTGACATTGTTGCATTTAGTTTTTTGTTTTTTTAATCATTGTTTATTTCTCTGTGTATCACGCAATAATCGATATTGGTTTGCTTACTCCACTAGAGTCTTTACTTTTCGGCGGATACTCTCCATCTCCTTCCTTTGTTCCACAACTTGACACATCTTTACATAACTCGTTCGGGGTTTATGGATTTCACTCTTGAAGTACTATTTGACATTCTACACAAGACTCCTAAATTGGAAGTTCTTGGTATTCCTATGGTATATCTTATATCTTGACTTGGATGCTATCATTTGTCAATTGTCGTGTTTTTGTAATGCTATTTTTGTCGCTGATGTATTTATTATTTCTTATTTAGGTATTTTGCTTACATTTGGCGGATGAAGAAGTGACAATAAACTTAGTGCCTTGTTGTTTCAAATCTTCTCTCAAATTTCTTTACATTTCAGATTTTAATGGATACAAATATGAAGTCCAAATGATGAGTCTTTTGGTAGAAAAGACTACAATCTTGGAGGAAATGAAGATATCCTTTTCGGGATTTTTATCAGATACTTTGGAGGAATTGGAGGAAAAGACTGCTGTCAAGAATCAATTGCAATCTTTAAGTCACGGAAAATTTGCTATTAAGTTTAAGTAA

Protein sequence

>MS.gene032852.t1

MKDMISNMPDVILHYILSLLSTKEAVRTSILSPRWRYLWTQLSVFEFKIPHPLYESNLENKDSANCLLDLVERLLHKSNHIERLCIEILKITVDANKFTSLVSSAAKHNVHDLQLSIDDKKYLDTIFVLPNCLSAFPSLKKLFLQLGSLLYVRDGICFSNLKTLNLSDVRFVDEKSVQQLFSGCPMLEELILYKCIWQCINEITIESSTLRTLTIHSSSSCLDYDHYDSCTIKINAPNILSLTCTSTPTLKFVLVNPISIVDANIGLEFDGPQSEQYRAECVFELLSALKGVKSLTMTSDTFQSLYFSADTLHLLPLFHNLTHLYITRSGFMDFTLEVLFDILHKTPKLEVLGIPMVFCLHLADEEVTINLVPCCFKSSLKFLYISDFNGYKYEVQMMSLLVEKTTILEEMKISFSGFLSDTLEELEEKTAVKNQLQSLSHGKFAIKFK