AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene006725


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006725.t1 MTR_4g080590 94.956 456 22 1 1 455 1 456 0.0 874
MS.gene006725.t1 MTR_4g080590 94.751 362 18 1 1 361 1 362 0.0 689
MS.gene006725.t1 MTR_4g080787 46.429 476 226 8 1 455 1 468 1.95e-123 368
MS.gene006725.t1 MTR_3g048290 47.021 470 233 6 1 455 1 469 5.36e-123 367
MS.gene006725.t1 MTR_4g130200 46.903 452 171 7 1 447 1 388 1.78e-116 347
MS.gene006725.t1 MTR_4g080773 44.989 469 232 8 1 448 1 464 2.85e-113 342
MS.gene006725.t1 MTR_4g080773 44.989 469 232 8 1 448 1 464 3.77e-113 342
MS.gene006725.t1 MTR_5g039950 44.444 459 208 6 1 451 1 420 3.82e-108 327
MS.gene006725.t1 MTR_7g023310 45.690 464 228 12 1 449 1 455 1.28e-105 321
MS.gene006725.t1 MTR_5g039970 54.489 323 139 4 5 319 1 323 8.84e-100 302
MS.gene006725.t1 MTR_7g023330 41.266 458 193 12 6 451 3 396 1.67e-87 273
MS.gene006725.t1 MTR_7g039630 43.514 370 166 6 1 359 1 338 5.74e-78 246
MS.gene006725.t1 MTR_4g080807 42.179 358 167 5 90 442 1 323 9.62e-71 230
MS.gene006725.t1 MTR_2g094750 43.280 372 174 13 21 357 88 457 1.86e-63 213
MS.gene006725.t1 MTR_4g081030 37.534 373 205 9 13 370 7 366 3.53e-53 183
MS.gene006725.t1 MTR_5g005690 27.983 461 269 12 9 418 3 451 3.89e-33 131
MS.gene006725.t1 MTR_5g080710 28.471 425 273 15 6 419 17 421 1.26e-25 109
MS.gene006725.t1 MTR_2g072530 25.688 436 309 11 15 441 5 434 3.04e-25 108
MS.gene006725.t1 MTR_4g045900 24.494 494 290 18 23 445 26 507 7.66e-23 101
MS.gene006725.t1 MTR_5g084070 26.799 403 269 10 23 419 13 395 1.06e-22 100
MS.gene006725.t1 MTR_4g080813 59.722 72 29 0 5 76 1 72 1.61e-22 92.0
MS.gene006725.t1 MTR_8g467800 28.440 436 258 18 14 418 11 423 9.26e-22 97.8
MS.gene006725.t1 MTR_1g082260 40.278 144 83 1 73 213 23 166 3.95e-21 90.9
MS.gene006725.t1 MTR_2g007450 24.885 434 233 14 23 419 16 393 3.91e-19 89.7
MS.gene006725.t1 MTR_7g094030 26.292 445 263 17 12 420 19 434 6.87e-18 86.3
MS.gene006725.t1 MTR_4g032845 25.556 450 280 15 21 438 1 427 7.29e-18 85.9
MS.gene006725.t1 MTR_8g062270 27.740 447 274 18 20 434 13 442 9.20e-18 85.9
MS.gene006725.t1 MTR_2g082850 25.770 357 228 12 22 355 21 363 3.47e-17 83.2
MS.gene006725.t1 MTR_1g090883 27.273 363 229 12 15 359 11 356 6.39e-17 82.4
MS.gene006725.t1 MTR_2g082800 25.935 428 264 18 9 415 15 410 1.11e-16 82.0
MS.gene006725.t1 MTR_0049s0110 25.837 418 259 16 23 423 8 391 1.45e-16 82.0
MS.gene006725.t1 MTR_2g007500 26.562 384 206 15 23 395 14 332 1.51e-16 80.9
MS.gene006725.t1 MTR_7g088260 26.157 432 225 19 17 429 85 441 2.83e-16 81.3
MS.gene006725.t1 MTR_7g026500 25.112 446 221 16 23 434 14 380 3.70e-16 80.5
MS.gene006725.t1 MTR_3g448340 25.688 436 269 18 23 418 6 426 4.73e-16 80.5
MS.gene006725.t1 MTR_3g026920 25.000 420 238 15 21 418 17 381 5.43e-16 80.1
MS.gene006725.t1 MTR_3g108150 25.176 425 230 16 22 429 12 365 1.11e-15 79.0
MS.gene006725.t1 MTR_7g075820 24.356 427 230 16 22 419 5 367 2.15e-15 78.2
MS.gene006725.t1 MTR_5g083890 23.266 447 244 14 22 432 5 388 2.49e-14 75.5
MS.gene006725.t1 MTR_8g467800 29.603 277 169 12 14 275 11 276 3.14e-14 73.9
MS.gene006725.t1 MTR_2g091145 25.058 431 255 16 23 423 21 413 3.65e-14 74.7
MS.gene006725.t1 MTR_5g073420 22.951 427 246 13 23 438 11 365 5.92e-14 73.6
MS.gene006725.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 6.19e-14 72.4
MS.gene006725.t1 MTR_6g018660 24.444 360 215 12 12 338 9 344 1.02e-13 72.8
MS.gene006725.t1 MTR_2g072720 24.236 458 303 16 11 444 31 468 1.10e-13 73.2
MS.gene006725.t1 MTR_8g058965 26.697 442 267 18 14 419 4 424 1.17e-13 73.2
MS.gene006725.t1 MTR_3g108560 23.364 428 239 17 17 429 14 367 1.50e-13 72.4
MS.gene006725.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 2.13e-13 71.6
MS.gene006725.t1 MTR_7g055943 25.566 442 244 18 4 426 21 396 2.15e-13 72.0
MS.gene006725.t1 MTR_3g107160 31.373 204 103 7 20 202 7 194 2.17e-13 72.0
MS.gene006725.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 2.39e-13 71.2
MS.gene006725.t1 MTR_1g038710 25.522 431 266 18 23 419 19 428 2.44e-13 72.0
MS.gene006725.t1 MTR_8g468840 25.293 427 272 18 21 418 12 420 2.86e-13 72.0
MS.gene006725.t1 MTR_7g056433 24.884 430 232 16 20 429 9 367 4.36e-13 70.9
MS.gene006725.t1 MTR_1g038760 25.895 363 233 12 14 359 6 349 4.77e-13 70.5
MS.gene006725.t1 MTR_5g038430 30.631 222 140 9 14 226 87 303 5.65e-13 71.2
MS.gene006725.t1 MTR_1g013630 29.592 196 123 7 23 206 39 231 6.54e-13 70.5
MS.gene006725.t1 MTR_3g023330 26.431 367 227 13 12 352 2 351 1.02e-12 69.7
MS.gene006725.t1 MTR_0227s0010 30.542 203 124 8 14 205 6 202 1.07e-12 69.3
MS.gene006725.t1 MTR_8g066650 27.744 328 220 9 16 335 73 391 1.21e-12 70.1
MS.gene006725.t1 MTR_4g032730 22.785 474 306 17 14 443 4 461 1.39e-12 69.7
MS.gene006725.t1 MTR_3g107100 24.450 409 239 14 20 418 8 356 2.28e-12 68.9
MS.gene006725.t1 MTR_1g038760 25.301 332 219 9 14 335 6 318 2.46e-12 68.6
MS.gene006725.t1 MTR_1g011410 28.054 221 115 6 18 226 2 190 2.94e-12 69.3
MS.gene006725.t1 MTR_2g047848 24.940 417 260 15 23 416 7 393 3.87e-12 68.2
MS.gene006725.t1 MTR_2g072730 23.991 446 284 17 1 417 1 420 3.92e-12 68.6
MS.gene006725.t1 MTR_1g011430 27.876 226 151 6 23 239 7 229 8.10e-12 67.0
MS.gene006725.t1 MTR_6g088700 27.356 329 215 12 22 338 13 329 8.36e-12 67.0
MS.gene006725.t1 MTR_1g021825 28.378 222 124 8 23 226 17 221 1.06e-11 67.0
MS.gene006725.t1 MTR_2g094450 36.571 175 79 9 195 357 31 185 1.25e-11 64.3
MS.gene006725.t1 MTR_1g021825 28.378 222 124 8 23 226 88 292 1.28e-11 67.0
MS.gene006725.t1 MTR_3g109982 23.690 477 260 17 22 429 12 453 1.78e-11 67.0
MS.gene006725.t1 MTR_2g082880 23.877 423 274 15 20 420 7 403 2.47e-11 65.9
MS.gene006725.t1 MTR_1g021820 30.263 228 132 10 23 232 28 246 2.47e-11 65.9
MS.gene006725.t1 MTR_2g082780 26.601 203 138 8 26 221 15 213 2.77e-11 63.5
MS.gene006725.t1 MTR_8g017280 27.053 207 124 6 22 208 35 234 2.82e-11 64.7
MS.gene006725.t1 MTR_1g014450 27.876 226 145 9 23 234 16 237 5.84e-11 64.7
MS.gene006725.t1 MTR_8g017280 27.053 207 124 6 22 208 35 234 6.17e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006725.t1 AT3G58880 29.425 435 254 17 21 419 1 418 3.80e-30 122
MS.gene006725.t1 AT4G14096 27.887 459 285 16 22 450 7 449 3.85e-30 122
MS.gene006725.t1 AT4G14096 27.887 459 285 16 22 450 7 449 3.85e-30 122
MS.gene006725.t1 AT3G58860 28.603 451 288 15 23 451 7 445 7.06e-30 121
MS.gene006725.t1 AT3G59210 29.590 463 264 17 22 441 6 449 1.03e-28 118
MS.gene006725.t1 AT3G59210 29.590 463 264 17 22 441 6 449 1.03e-28 118
MS.gene006725.t1 AT3G59210 29.590 463 264 17 22 441 6 449 1.03e-28 118
MS.gene006725.t1 AT3G59210 29.590 463 264 17 22 441 6 449 1.03e-28 118
MS.gene006725.t1 AT3G59210 29.590 463 264 17 22 441 6 449 1.03e-28 118
MS.gene006725.t1 AT3G58900 28.935 432 263 14 23 419 2 424 1.00e-26 112
MS.gene006725.t1 AT5G53840 27.674 430 289 13 19 441 14 428 1.38e-26 112
MS.gene006725.t1 AT4G13965 26.728 434 283 14 23 446 10 418 5.92e-26 109
MS.gene006725.t1 AT4G14103 28.571 357 231 11 22 361 7 356 6.77e-26 108
MS.gene006725.t1 AT4G14103 28.571 357 231 11 22 361 7 356 6.77e-26 108
MS.gene006725.t1 AT1G78840 29.454 421 252 16 22 418 4 403 8.40e-26 109
MS.gene006725.t1 AT1G78840 29.454 421 252 16 22 418 4 403 8.40e-26 109
MS.gene006725.t1 AT4G14103 26.444 450 278 16 22 450 7 424 3.13e-25 107
MS.gene006725.t1 AT1G32375 27.098 417 255 15 23 418 2 390 2.11e-24 105
MS.gene006725.t1 AT1G32375 27.098 417 255 15 23 418 2 390 2.11e-24 105
MS.gene006725.t1 AT4G22280 28.507 442 273 16 23 451 2 413 3.01e-24 104
MS.gene006725.t1 AT3G59230 26.955 486 281 21 14 446 4 468 3.01e-24 105
MS.gene006725.t1 AT1G55030 24.757 412 269 12 16 414 12 395 5.72e-24 103
MS.gene006725.t1 AT1G55030 24.757 412 269 12 16 414 2 385 6.11e-24 103
MS.gene006725.t1 AT3G03030 26.897 435 280 13 23 423 2 432 1.27e-23 103
MS.gene006725.t1 AT1G51370 27.918 437 255 18 17 429 13 413 1.35e-23 103
MS.gene006725.t1 AT5G56420 25.287 435 293 13 22 446 5 417 1.72e-23 102
MS.gene006725.t1 AT5G56420 25.287 435 293 13 22 446 5 417 1.72e-23 102
MS.gene006725.t1 AT5G56420 25.287 435 293 13 22 446 5 417 1.72e-23 102
MS.gene006725.t1 AT5G25860 27.059 425 263 13 22 418 11 416 2.60e-23 102
MS.gene006725.t1 AT3G59200 25.840 476 263 19 22 434 6 454 3.29e-23 102
MS.gene006725.t1 AT5G44950 25.776 419 273 12 22 418 3 405 3.49e-23 102
MS.gene006725.t1 AT3G59240 26.351 444 286 15 22 433 7 441 1.41e-22 100
MS.gene006725.t1 AT4G22280 30.857 350 208 12 23 359 2 330 1.53e-22 98.6
MS.gene006725.t1 AT2G42730 26.353 425 279 13 20 418 2 418 1.62e-22 100
MS.gene006725.t1 AT5G38590 25.571 438 283 13 23 446 2 410 2.91e-22 99.0
MS.gene006725.t1 AT1G66290 25.653 421 288 13 19 428 25 431 3.74e-22 99.0
MS.gene006725.t1 AT3G50710 25.843 445 281 16 23 445 2 419 6.47e-22 98.2
MS.gene006725.t1 AT1G66300 24.941 425 290 14 23 433 29 438 1.31e-21 97.4
MS.gene006725.t1 AT3G59170 28.982 452 252 18 22 419 6 442 1.53e-21 97.4
MS.gene006725.t1 AT1G13780 25.000 464 295 17 23 451 10 455 1.70e-21 97.1
MS.gene006725.t1 AT1G58310 28.238 386 227 13 17 361 2 378 1.82e-21 97.4
MS.gene006725.t1 AT3G28410 26.888 331 201 14 12 328 19 322 2.33e-21 96.7
MS.gene006725.t1 AT5G53635 28.193 415 266 14 24 418 1 403 2.73e-21 96.3
MS.gene006725.t1 AT4G10400 26.256 438 280 14 23 449 2 407 2.83e-21 95.9
MS.gene006725.t1 AT4G10400 26.256 438 280 14 23 449 2 407 2.83e-21 95.9
MS.gene006725.t1 AT4G10400 26.256 438 280 14 23 449 2 407 2.83e-21 95.9
MS.gene006725.t1 AT3G59250 27.952 415 249 14 22 419 6 387 4.04e-21 95.5
MS.gene006725.t1 AT3G26922 28.030 264 179 6 15 273 6 263 6.11e-21 93.6
MS.gene006725.t1 AT3G26922 28.030 264 179 6 15 273 6 263 6.11e-21 93.6
MS.gene006725.t1 AT1G16930 24.703 421 280 13 23 418 15 423 7.09e-21 95.1
MS.gene006725.t1 AT1G16930 24.703 421 280 13 23 418 15 423 7.09e-21 95.1
MS.gene006725.t1 AT1G16930 24.703 421 280 13 23 418 15 423 7.09e-21 95.1
MS.gene006725.t1 AT3G03040 26.437 435 269 15 23 419 2 423 9.78e-21 95.1
MS.gene006725.t1 AT5G56380 26.244 442 288 16 23 443 2 426 3.99e-20 92.8
MS.gene006725.t1 AT5G56380 26.244 442 288 16 23 443 2 426 3.99e-20 92.8
MS.gene006725.t1 AT1G06630 28.249 354 225 12 22 359 11 351 4.73e-20 91.7
MS.gene006725.t1 AT1G06630 28.249 354 225 12 22 359 11 351 4.73e-20 91.7
MS.gene006725.t1 AT5G56440 26.392 413 270 10 23 418 2 397 5.54e-20 92.4
MS.gene006725.t1 AT4G00315 31.667 240 144 8 23 252 2 231 8.15e-20 92.0
MS.gene006725.t1 AT3G58980 26.862 443 273 17 23 431 2 427 9.26e-20 92.4
MS.gene006725.t1 AT5G22720 27.021 433 254 16 22 416 22 430 1.03e-19 91.7
MS.gene006725.t1 AT3G58930 25.056 443 276 15 23 419 2 434 1.03e-19 92.0
MS.gene006725.t1 AT3G58930 25.056 443 276 15 23 419 2 434 1.03e-19 92.0
MS.gene006725.t1 AT3G58930 25.056 443 276 15 23 419 2 434 1.03e-19 92.0
MS.gene006725.t1 AT3G49030 24.831 443 285 19 22 445 20 433 1.06e-19 91.7
MS.gene006725.t1 AT1G06630 28.249 354 225 12 22 359 11 351 1.23e-19 90.9
MS.gene006725.t1 AT1G06630 28.249 354 225 12 22 359 11 351 1.23e-19 90.9
MS.gene006725.t1 AT1G06630 28.249 354 225 12 22 359 11 351 1.23e-19 90.9
MS.gene006725.t1 AT1G06630 28.249 354 225 12 22 359 11 351 1.23e-19 90.9
MS.gene006725.t1 AT3G59000 26.256 438 268 15 23 419 2 425 1.28e-19 91.7
MS.gene006725.t1 AT1G51370 31.111 225 119 7 17 226 13 216 1.47e-19 90.1
MS.gene006725.t1 AT5G02700 26.911 327 207 13 11 328 17 320 1.48e-19 91.3
MS.gene006725.t1 AT1G51370 31.111 225 119 7 17 226 13 216 2.02e-19 90.5
MS.gene006725.t1 AT4G00160 25.959 443 286 14 22 445 15 434 2.15e-19 90.9
MS.gene006725.t1 AT5G41840 29.275 386 223 15 18 361 9 386 2.18e-19 91.3
MS.gene006725.t1 AT3G44060 24.424 434 306 11 28 451 4 425 2.19e-19 90.5
MS.gene006725.t1 AT1G06630 28.249 354 225 12 22 359 20 360 2.22e-19 90.5
MS.gene006725.t1 AT1G06630 28.249 354 225 12 22 359 11 351 2.61e-19 90.5
MS.gene006725.t1 AT2G29930 27.460 437 266 21 14 418 4 421 3.45e-19 90.1
MS.gene006725.t1 AT2G29930 27.460 437 266 21 14 418 4 421 3.45e-19 90.1
MS.gene006725.t1 AT3G59160 27.692 390 224 12 22 361 12 393 3.81e-19 90.1
MS.gene006725.t1 AT1G78750 24.888 446 312 14 23 450 18 458 4.47e-19 89.7
MS.gene006725.t1 AT1G78750 24.888 446 312 14 23 450 18 458 4.47e-19 89.7
MS.gene006725.t1 AT5G38590 31.754 211 134 5 23 228 2 207 5.49e-19 87.4
MS.gene006725.t1 AT5G56400 24.887 442 298 10 23 451 33 453 5.80e-19 89.4
MS.gene006725.t1 AT3G58960 26.106 452 263 18 23 419 2 437 1.01e-18 89.0
MS.gene006725.t1 AT5G56810 24.449 454 298 14 15 450 5 431 1.09e-18 88.6
MS.gene006725.t1 AT3G52680 26.606 436 279 15 22 441 20 430 1.20e-18 88.6
MS.gene006725.t1 AT4G10420 27.273 297 176 11 135 418 22 291 3.24e-18 85.9
MS.gene006725.t1 AT1G66320 25.172 437 291 16 17 434 23 442 3.31e-18 87.0
MS.gene006725.t1 AT5G22730 23.855 415 287 10 22 416 27 432 4.75e-18 86.7
MS.gene006725.t1 AT5G22730 23.855 415 287 10 22 416 27 432 4.75e-18 86.7
MS.gene006725.t1 AT1G55660 26.573 429 272 15 18 419 48 460 5.12e-18 86.7
MS.gene006725.t1 AT5G02930 26.197 355 228 14 23 360 28 365 6.91e-18 86.3
MS.gene006725.t1 AT3G59190 26.781 407 251 15 22 399 11 399 1.07e-17 85.9
MS.gene006725.t1 AT4G13960 25.701 428 274 13 23 419 2 416 1.09e-17 85.5
MS.gene006725.t1 AT4G13960 25.701 428 274 13 23 419 2 416 1.09e-17 85.5
MS.gene006725.t1 AT5G22660 25.783 415 278 12 22 418 12 414 1.57e-17 85.1
MS.gene006725.t1 AT5G22670 25.971 412 279 12 22 418 10 410 1.86e-17 84.7
MS.gene006725.t1 AT5G56810 26.568 271 179 7 15 273 5 267 2.05e-17 83.2
MS.gene006725.t1 AT1G69630 25.059 427 288 14 11 418 6 419 2.23e-17 84.7
MS.gene006725.t1 AT3G58900 29.114 316 197 10 23 314 2 314 2.78e-17 82.8
MS.gene006725.t1 AT5G41830 25.558 403 241 16 22 383 12 396 3.88e-17 84.3
MS.gene006725.t1 AT2G26030 23.934 422 279 18 23 416 4 411 4.06e-17 84.0
MS.gene006725.t1 AT3G60040 25.112 446 291 15 22 443 231 657 5.04e-17 84.3
MS.gene006725.t1 AT3G60040 25.112 446 291 15 22 443 229 655 5.21e-17 84.3
MS.gene006725.t1 AT1G55660 30.415 217 141 6 18 226 48 262 5.35e-17 82.8
MS.gene006725.t1 AT3G60040 25.112 446 291 15 22 443 232 658 5.45e-17 84.3
MS.gene006725.t1 AT5G50270 26.777 422 254 16 23 418 2 394 5.47e-17 83.2
MS.gene006725.t1 AT3G26922 26.718 262 160 5 15 273 6 238 5.59e-17 81.6
MS.gene006725.t1 AT3G60040 25.112 446 291 15 22 443 231 657 5.64e-17 84.3
MS.gene006725.t1 AT3G60040 25.112 446 291 15 22 443 12 438 6.11e-17 84.0
MS.gene006725.t1 AT2G26030 24.105 419 277 17 23 416 4 406 6.24e-17 83.2
MS.gene006725.t1 AT2G26030 24.105 419 277 17 23 416 4 406 6.24e-17 83.2
MS.gene006725.t1 AT3G58900 28.981 314 196 10 23 312 2 312 8.55e-17 81.6
MS.gene006725.t1 AT3G58900 28.981 314 196 10 23 312 2 312 8.55e-17 81.6
MS.gene006725.t1 AT3G59190 27.671 365 227 14 22 357 11 367 8.68e-17 82.4
MS.gene006725.t1 AT1G66310 26.097 433 289 16 12 429 8 424 8.89e-17 82.8
MS.gene006725.t1 AT5G56390 26.683 416 245 18 41 429 21 403 1.33e-16 82.0
MS.gene006725.t1 AT5G44980 22.717 427 303 12 22 431 3 419 1.93e-16 81.6
MS.gene006725.t1 AT5G44980 22.717 427 303 12 22 431 3 419 1.93e-16 81.6
MS.gene006725.t1 AT2G42720 25.229 436 275 13 23 425 2 419 2.27e-16 81.6
MS.gene006725.t1 AT3G26930 25.121 414 267 14 22 416 20 409 3.38e-16 80.9
MS.gene006725.t1 AT5G27750 21.586 454 308 15 23 441 5 445 4.52e-16 80.5
MS.gene006725.t1 AT3G49480 25.393 445 286 13 10 430 1 423 7.46e-16 80.1
MS.gene006725.t1 AT5G60610 24.697 413 266 15 23 418 2 386 1.10e-15 79.0
MS.gene006725.t1 AT5G60610 24.697 413 266 15 23 418 2 386 1.10e-15 79.0
MS.gene006725.t1 AT3G52680 27.011 348 219 11 22 359 20 342 1.36e-15 78.6
MS.gene006725.t1 AT2G26860 23.373 415 279 11 23 418 2 396 2.90e-15 77.8
MS.gene006725.t1 AT2G26860 23.373 415 279 11 23 418 2 396 2.90e-15 77.8
MS.gene006725.t1 AT5G56410 28.095 210 131 4 32 221 12 221 2.96e-15 78.2
MS.gene006725.t1 AT3G59150 26.620 432 278 11 23 419 13 440 3.13e-15 78.2
MS.gene006725.t1 AT5G15620 27.626 438 275 17 23 434 2 423 3.15e-15 77.8
MS.gene006725.t1 AT3G58930 24.541 436 253 15 23 419 2 400 5.29e-15 77.4
MS.gene006725.t1 AT3G58930 24.541 436 253 15 23 419 2 400 5.29e-15 77.4
MS.gene006725.t1 AT2G04230 26.349 315 192 9 22 304 12 318 5.73e-15 77.0
MS.gene006725.t1 AT4G09920 26.603 312 193 11 23 321 2 290 7.52e-15 75.5
MS.gene006725.t1 AT4G09920 26.603 312 193 11 23 321 2 290 7.52e-15 75.5
MS.gene006725.t1 AT4G09920 26.603 312 193 11 23 321 2 290 7.52e-15 75.5
MS.gene006725.t1 AT3G49030 23.918 439 268 19 22 445 20 407 7.96e-15 76.6
MS.gene006725.t1 AT5G56820 22.374 438 291 12 23 445 15 418 9.18e-15 76.6
MS.gene006725.t1 AT5G56690 25.472 424 258 18 25 418 4 399 9.86e-15 76.3
MS.gene006725.t1 AT1G78760 22.897 428 293 13 22 431 15 423 1.09e-14 76.3
MS.gene006725.t1 AT5G02920 31.188 202 120 7 11 207 16 203 1.10e-14 74.3
MS.gene006725.t1 AT5G38396 24.318 440 278 16 23 422 2 426 1.33e-14 76.3
MS.gene006725.t1 AT1G52650 23.953 430 280 12 23 419 2 417 1.40e-14 76.3
MS.gene006725.t1 AT5G56370 25.432 405 249 16 23 409 2 371 1.47e-14 75.9
MS.gene006725.t1 AT5G56370 25.432 405 249 16 23 409 2 371 1.47e-14 75.9
MS.gene006725.t1 AT4G15060 27.371 369 213 15 17 341 18 375 1.66e-14 75.5
MS.gene006725.t1 AT4G26340 24.429 438 279 16 23 442 2 405 2.18e-14 75.1
MS.gene006725.t1 AT4G09920 28.774 212 141 5 23 228 2 209 2.39e-14 74.3
MS.gene006725.t1 AT4G09920 28.774 212 141 5 23 228 2 209 2.39e-14 74.3
MS.gene006725.t1 AT3G44810 26.667 405 263 13 28 408 12 406 2.68e-14 75.1
MS.gene006725.t1 AT4G13985 24.186 430 297 11 19 427 15 436 2.71e-14 75.1
MS.gene006725.t1 AT1G60400 26.190 336 211 12 17 334 8 324 2.85e-14 74.7
MS.gene006725.t1 AT4G00320 26.357 387 230 17 22 369 12 382 2.96e-14 75.1
MS.gene006725.t1 AT3G62430 27.002 437 276 15 23 434 2 420 5.00e-14 74.3
MS.gene006725.t1 AT4G27050 26.273 373 222 16 23 361 4 357 5.06e-14 74.3
MS.gene006725.t1 AT4G27050 26.273 373 222 16 23 361 4 357 5.06e-14 74.3
MS.gene006725.t1 AT4G27050 26.273 373 222 16 23 361 4 357 5.06e-14 74.3
MS.gene006725.t1 AT4G27050 26.273 373 222 16 23 361 4 357 5.06e-14 74.3
MS.gene006725.t1 AT4G27050 26.273 373 222 16 23 361 4 357 5.06e-14 74.3
MS.gene006725.t1 AT3G03030 27.715 267 179 7 23 276 2 267 5.12e-14 73.6
MS.gene006725.t1 AT1G06630 26.645 304 196 11 22 311 11 301 5.54e-14 72.8
MS.gene006725.t1 AT1G13780 26.978 278 169 10 23 277 10 276 5.61e-14 73.2
MS.gene006725.t1 AT3G26922 25.523 239 167 6 40 273 2 234 7.21e-14 72.4
MS.gene006725.t1 AT3G26922 25.523 239 167 6 40 273 2 234 7.21e-14 72.4
MS.gene006725.t1 AT3G51530 25.169 445 273 20 22 441 29 438 9.11e-14 73.6
MS.gene006725.t1 AT2G29910 27.925 265 168 9 22 275 4 256 1.86e-13 72.0
MS.gene006725.t1 AT2G29910 27.925 265 168 9 22 275 4 256 1.86e-13 72.0
MS.gene006725.t1 AT2G29910 27.925 265 168 9 22 275 4 256 1.86e-13 72.0
MS.gene006725.t1 AT2G29910 27.925 265 168 9 22 275 4 256 1.86e-13 72.0
MS.gene006725.t1 AT2G29910 27.925 265 168 9 22 275 4 256 2.66e-13 71.2
MS.gene006725.t1 AT2G29910 27.925 265 168 9 22 275 4 256 2.66e-13 71.2
MS.gene006725.t1 AT2G29910 27.925 265 168 9 22 275 28 280 3.40e-13 71.2
MS.gene006725.t1 AT4G03220 22.965 479 301 18 23 445 24 490 4.99e-13 71.2
MS.gene006725.t1 AT3G49040 25.379 264 173 10 22 273 16 267 6.47e-13 69.7
MS.gene006725.t1 AT5G02910 26.816 358 219 15 20 360 8 339 8.39e-13 70.1
MS.gene006725.t1 AT3G49020 22.807 456 290 13 13 442 12 431 8.73e-13 70.5
MS.gene006725.t1 AT1G13570 29.130 230 136 9 18 231 1 219 9.20e-13 69.3
MS.gene006725.t1 AT5G56370 25.573 262 174 8 23 276 2 250 9.99e-13 69.3
MS.gene006725.t1 AT5G41630 27.684 354 215 16 17 336 6 352 1.18e-12 70.1
MS.gene006725.t1 AT1G16940 25.381 197 130 5 23 213 11 196 1.26e-12 69.7
MS.gene006725.t1 AT5G02910 27.374 358 217 16 20 360 8 339 1.48e-12 69.7
MS.gene006725.t1 AT5G02910 27.374 358 217 16 20 360 8 339 1.53e-12 69.3
MS.gene006725.t1 AT5G22610 23.853 436 272 17 21 416 16 431 1.77e-12 69.7
MS.gene006725.t1 AT1G80960 24.508 457 286 19 5 441 36 453 1.86e-12 69.3
MS.gene006725.t1 AT5G44960 21.378 421 266 13 23 418 5 385 1.90e-12 69.3
MS.gene006725.t1 AT3G26930 23.514 387 253 14 49 416 2 364 1.97e-12 69.3
MS.gene006725.t1 AT1G13570 24.444 450 247 17 18 431 1 393 3.40e-12 68.6
MS.gene006725.t1 AT1G13570 24.444 450 247 17 18 431 1 393 3.40e-12 68.6
MS.gene006725.t1 AT1G80960 25.957 470 287 23 5 441 36 477 5.82e-12 68.2
MS.gene006725.t1 AT1G80960 25.957 470 287 23 5 441 36 477 5.82e-12 68.2
MS.gene006725.t1 AT1G80960 25.957 470 287 23 5 441 36 477 5.82e-12 68.2
MS.gene006725.t1 AT5G22610 23.944 426 254 16 21 416 16 401 6.43e-12 67.8
MS.gene006725.t1 AT5G38390 23.776 429 276 15 23 419 2 411 6.52e-12 67.8
MS.gene006725.t1 AT4G15060 28.311 219 149 6 23 234 172 389 7.39e-12 67.8
MS.gene006725.t1 AT5G62970 24.779 452 266 18 36 440 16 440 1.63e-11 66.6
MS.gene006725.t1 AT3G49150 25.602 457 293 17 22 445 15 457 1.79e-11 66.2
MS.gene006725.t1 AT5G56430 26.316 285 181 8 145 418 58 324 1.79e-11 65.9
MS.gene006725.t1 AT1G80960 25.885 452 278 22 23 441 11 438 2.27e-11 65.9
MS.gene006725.t1 AT3G26920 25.862 290 181 11 139 415 37 305 2.34e-11 65.5
MS.gene006725.t1 AT3G26920 25.862 290 181 11 139 415 37 305 2.34e-11 65.5
MS.gene006725.t1 AT2G29930 26.885 305 181 15 145 418 8 301 4.38e-11 64.7
MS.gene006725.t1 AT5G22660 25.573 262 186 4 22 277 12 270 4.68e-11 64.3
MS.gene006725.t1 AT5G27750 21.368 351 232 12 23 340 5 344 4.94e-11 64.7
MS.gene006725.t1 AT3G42770 24.940 417 267 17 28 422 4 396 5.00e-11 65.1
MS.gene006725.t1 AT5G03100 22.327 318 220 11 19 329 5 302 6.88e-11 63.5
MS.gene006725.t1 AT5G03100 22.327 318 220 11 19 329 5 302 6.88e-11 63.5
MS.gene006725.t1 AT1G22000 31.285 179 118 2 25 203 31 204 9.69e-11 63.9

Find 77 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAATTTCTTCACATTTA+TGG 0.090305 4.1:-25996567 MS.gene006725:CDS
CAACATGCAGTTCGTTATTT+TGG 0.131415 4.1:+25997209 None:intergenic
ACTAAGTTGGATATAGTATT+TGG 0.170742 4.1:-25997595 MS.gene006725:CDS
GAAAATCAAAGACGGGTAAT+TGG 0.233443 4.1:+25997869 None:intergenic
TAGAATTTCTTCACATTTAT+GGG 0.250696 4.1:-25996566 MS.gene006725:CDS
TATCACCCACATTATGTCTT+TGG 0.262830 4.1:+25998010 None:intergenic
ACCTACTATTTCTAGATTCT+AGG 0.280979 4.1:+25997656 None:intergenic
AAACTTCACCAATCTGATTT+CGG 0.294077 4.1:+25996335 None:intergenic
CCTGCATTAACAATAGTTAC+TGG 0.304860 4.1:+25997739 None:intergenic
GTTGATGCAAATATTGATCT+TGG 0.309181 4.1:-25997244 MS.gene006725:CDS
ATGTGAAGAAATTCTAGTTT+AGG 0.324682 4.1:+25996573 None:intergenic
ATCAATATTTGCATCAACTA+TGG 0.332138 4.1:+25997249 None:intergenic
GCTATCAGATGAAACTATTC+AGG 0.345809 4.1:-25997134 MS.gene006725:intron
CCGGGATGCCGAGAAACTAT+TGG 0.361036 4.1:+25997624 None:intergenic
ATTCTAGTTTAGGACTCTTT+CGG 0.366674 4.1:+25996583 None:intergenic
TTAGGGATCTTACTTATCCT+TGG 0.372669 4.1:-25996448 MS.gene006725:intron
ACAAGGAAACAATTTATAGT+TGG 0.386110 4.1:+25997283 None:intergenic
CAAGGAAACAATTTATAGTT+GGG 0.388932 4.1:+25997284 None:intergenic
AGGAACCAATTGCAAGCTTT+AGG 0.419691 4.1:-25996225 MS.gene006725:CDS
CGGGATGCCGAGAAACTATT+GGG 0.428862 4.1:+25997625 None:intergenic
TTGATGCAAATATTGATCTT+GGG 0.429706 4.1:-25997243 MS.gene006725:CDS
AAAATCAAAGACGGGTAATT+GGG 0.435838 4.1:+25997870 None:intergenic
TTGGTAGTGTCGAGTTTCTC+AGG 0.436628 4.1:-25997156 MS.gene006725:CDS
CCATGCCTAAAGCTTGCAAT+TGG 0.438162 4.1:+25996220 None:intergenic
TGTGTTACCCAATAGTTTCT+CGG 0.443039 4.1:-25997632 MS.gene006725:CDS
CCAGTAACTATTGTTAATGC+AGG 0.451607 4.1:-25997739 MS.gene006725:CDS
ACCTAGAATCTAGAAATAGT+AGG 0.456966 4.1:-25997657 MS.gene006725:CDS
GGTGACTTAGAATTTCGCTT+TGG 0.469597 4.1:+25997835 None:intergenic
AATTCCAACATTGAAGAAGT+TGG 0.478445 4.1:-25997398 MS.gene006725:CDS
ACTAGATCTACGAGGCAATC+TGG 0.484619 4.1:+25997814 None:intergenic
TTCTCGTCTCTCTACGGAAG+AGG 0.486845 4.1:-25997938 MS.gene006725:CDS
AAGATAATATCTTCAAGCTA+TGG 0.487718 4.1:+25997539 None:intergenic
ATGTCCAACTTCTTCAATGT+TGG 0.494500 4.1:+25997394 None:intergenic
GGTTGGATTTGTGAAGTAGT+TGG 0.497013 4.1:+25997788 None:intergenic
GGATCTTACTTATCCTTGGA+TGG 0.498856 4.1:-25996444 MS.gene006725:CDS
AAGGACAACTCTTGTAAGAC+AGG 0.508600 4.1:+25997460 None:intergenic
TAAACTCCAAAGACATAATG+TGG 0.514913 4.1:-25998016 MS.gene006725:CDS
TACCATCAGGTACAGAATCA+AGG 0.516438 4.1:+25997569 None:intergenic
TATCCAACTTAGTCAATGAC+CGG 0.522921 4.1:+25997605 None:intergenic
CTAGGTTAAGTGTAAGATCA+TGG 0.524663 4.1:+25997674 None:intergenic
TTCCTTGATTCTGTACCTGA+TGG 0.531110 4.1:-25997571 MS.gene006725:CDS
ATTGAGCTGTTCAGTCGTCT+TGG 0.533363 4.1:-25997175 MS.gene006725:CDS
ATCCCGGTCATTGACTAAGT+TGG 0.539690 4.1:-25997608 MS.gene006725:CDS
CCAATAGTTTCTCGGCATCC+CGG 0.540751 4.1:-25997624 MS.gene006725:CDS
CTATGGAGGTAGAGTTAACA+AGG 0.542514 4.1:+25997266 None:intergenic
ACTTAAAGATAAAAGATTCA+CGG 0.544302 4.1:+25997318 None:intergenic
GAGATGAACATTTACTGTAC+AGG 0.544472 4.1:-25996285 MS.gene006725:CDS
AATATAATGAAGAATTCCCT+CGG 0.546133 4.1:+25997963 None:intergenic
CAATTGCAAGCTTTAGGCAT+GGG 0.547449 4.1:-25996219 MS.gene006725:CDS
AGCCGACTTCTCATTTGTGA+AGG 0.550930 4.1:+25997504 None:intergenic
AGATGAAGCCGAAATCAGAT+TGG 0.557556 4.1:-25996343 MS.gene006725:CDS
CTATGGAAACAGATACCATC+AGG 0.559011 4.1:+25997556 None:intergenic
AGAGAAGATTTGAAACAGCA+AGG 0.559103 4.1:+25996396 None:intergenic
TATTCTTTCTCGTCTCTCTA+CGG 0.559151 4.1:-25997944 MS.gene006725:CDS
CGCGTCAAATTCTTGAACGA+AGG 0.560621 4.1:+25996654 None:intergenic
CTTCTATATTAGCAACAAAG+TGG 0.565241 4.1:-25997906 MS.gene006725:CDS
AATTCTCGAAAATCAAAGAC+GGG 0.570247 4.1:+25997862 None:intergenic
TATCCTTGGATGGTGAAGAC+TGG 0.573895 4.1:-25996434 MS.gene006725:CDS
TGTCCAGTCTTCACCATCCA+AGG 0.574526 4.1:+25996431 None:intergenic
CCAATTGCAAGCTTTAGGCA+TGG 0.576197 4.1:-25996220 MS.gene006725:CDS
AGATTGCCTCGTAGATCTAG+TGG 0.576199 4.1:-25997812 MS.gene006725:CDS
TACCTTCACAAATGAGAAGT+CGG 0.580484 4.1:-25997506 MS.gene006725:CDS
TCATTAACTTGCGTCACTCG+TGG 0.584904 4.1:-25996188 MS.gene006725:CDS
CAGTAACTATTGTTAATGCA+GGG 0.596957 4.1:-25997738 MS.gene006725:CDS
ATATAATGAAGAATTCCCTC+GGG 0.598954 4.1:+25997964 None:intergenic
AGAATTTCTTCACATTTATG+GGG 0.604749 4.1:-25996565 MS.gene006725:intron
CGAAGAAGCTGGCTGATGTG+AGG 0.621819 4.1:-25996245 MS.gene006725:CDS
ATGATTAGCGATTTACCCGA+GGG 0.622620 4.1:-25997979 MS.gene006725:CDS
ATGTCTGCTAATACTTCACA+AGG 0.623262 4.1:+25996609 None:intergenic
TAATTCTCGAAAATCAAAGA+CGG 0.624079 4.1:+25997861 None:intergenic
AATATTTGCATCAACTATGG+AGG 0.633314 4.1:+25997252 None:intergenic
ATCCAACTTAGTCAATGACC+GGG 0.638859 4.1:+25997606 None:intergenic
CAACAAAGTGGAGATACTTG+TGG 0.640766 4.1:-25997894 MS.gene006725:CDS
TATGATTAGCGATTTACCCG+AGG 0.648778 4.1:-25997980 MS.gene006725:CDS
AAACTCCAAAGACATAATGT+GGG 0.676914 4.1:-25998015 MS.gene006725:CDS
AGGACAACTCTTGTAAGACA+GGG 0.690229 4.1:+25997461 None:intergenic
GTTGGTCCACTAGATCTACG+AGG 0.818443 4.1:+25997806 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAGTTAAATTAAATG+AGG + chr4.1:25997245-25997264 None:intergenic 10.0%
!! TAAAAAGTTAAATTAAATGA+GGG + chr4.1:25997244-25997263 None:intergenic 10.0%
!! AAAAAGTTAAATTAAATGAG+GGG + chr4.1:25997243-25997262 None:intergenic 15.0%
!! ATGTAATTGATCAAATTTAA+TGG + chr4.1:25997344-25997363 None:intergenic 15.0%
!! AAAAAATGTCACATTCTTAA+GGG - chr4.1:25997923-25997942 MS.gene006725:CDS 20.0%
!! AAGAATATGCAAATAATACA+AGG + chr4.1:25997476-25997495 None:intergenic 20.0%
!! ACTTAAAGATAAAAGATTCA+CGG + chr4.1:25996915-25996934 None:intergenic 20.0%
!! GATCAATTACATTTCTTAAT+AGG - chr4.1:25997352-25997371 MS.gene006725:CDS 20.0%
!! TAAAAAATGTCACATTCTTA+AGG - chr4.1:25997922-25997941 MS.gene006725:CDS 20.0%
!! TAGAATTTCTTCACATTTAT+GGG - chr4.1:25997664-25997683 MS.gene006725:CDS 20.0%
!! TTGCTTATATTTCATTACAA+AGG + chr4.1:25997175-25997194 None:intergenic 20.0%
!!! CTGACTTGATTTTTTTTTAT+AGG - chr4.1:25997311-25997330 MS.gene006725:CDS 20.0%
! AAACAAAAACAAGTCAAGAT+CGG + chr4.1:25997510-25997529 None:intergenic 25.0%
! AAATTATTGTTAGCCGTTAA+AGG + chr4.1:25997727-25997746 None:intergenic 25.0%
! AAGATAATATCTTCAAGCTA+TGG + chr4.1:25996694-25996713 None:intergenic 25.0%
! AATATAATGAAGAATTCCCT+CGG + chr4.1:25996270-25996289 None:intergenic 25.0%
! ACAAGGAAACAATTTATAGT+TGG + chr4.1:25996950-25996969 None:intergenic 25.0%
! AGAATTTCTTCACATTTATG+GGG - chr4.1:25997665-25997684 MS.gene006725:CDS 25.0%
! ATCAATATTTGCATCAACTA+TGG + chr4.1:25996984-25997003 None:intergenic 25.0%
! ATGACCCAATTTATTAATCA+TGG - chr4.1:25997272-25997291 MS.gene006725:CDS 25.0%
! ATTGTTAAATAAGATCGAAG+TGG + chr4.1:25997205-25997224 None:intergenic 25.0%
! CAAGGAAACAATTTATAGTT+GGG + chr4.1:25996949-25996968 None:intergenic 25.0%
! CTAGAATTTCTTCACATTTA+TGG - chr4.1:25997663-25997682 MS.gene006725:CDS 25.0%
! TAATTCTCGAAAATCAAAGA+CGG + chr4.1:25996372-25996391 None:intergenic 25.0%
! TGTCTATTGTAAATGTTGAT+TGG - chr4.1:25997444-25997463 MS.gene006725:CDS 25.0%
! TTGATGCAAATATTGATCTT+GGG - chr4.1:25996987-25997006 MS.gene006725:intron 25.0%
!! ACTAAGTTGGATATAGTATT+TGG - chr4.1:25996635-25996654 MS.gene006725:CDS 25.0%
!!! ATGTGAAGAAATTCTAGTTT+AGG + chr4.1:25997660-25997679 None:intergenic 25.0%
!!! CAATGAAGAGCTTTTTTATA+CGG + chr4.1:25996466-25996485 None:intergenic 25.0%
!!! TGTGTATTGATTCTTGTTTA+GGG - chr4.1:25997765-25997784 MS.gene006725:CDS 25.0%
!!! TTGTGTATTGATTCTTGTTT+AGG - chr4.1:25997764-25997783 MS.gene006725:CDS 25.0%
AAAATCAAAGACGGGTAATT+GGG + chr4.1:25996363-25996382 None:intergenic 30.0%
AAACTCCAAAGACATAATGT+GGG - chr4.1:25996215-25996234 MS.gene006725:CDS 30.0%
AAACTTCACCAATCTGATTT+CGG + chr4.1:25997898-25997917 None:intergenic 30.0%
AATATTTGCATCAACTATGG+AGG + chr4.1:25996981-25997000 None:intergenic 30.0%
AATTCCAACATTGAAGAAGT+TGG - chr4.1:25996832-25996851 MS.gene006725:intron 30.0%
AATTCTCGAAAATCAAAGAC+GGG + chr4.1:25996371-25996390 None:intergenic 30.0%
ACCCAATTTATTAATCATGG+AGG - chr4.1:25997275-25997294 MS.gene006725:CDS 30.0%
ACCCTCCATGATTAATAAAT+TGG + chr4.1:25997280-25997299 None:intergenic 30.0%
ACCTAGAATCTAGAAATAGT+AGG - chr4.1:25996573-25996592 MS.gene006725:CDS 30.0%
ATATAATGAAGAATTCCCTC+GGG + chr4.1:25996269-25996288 None:intergenic 30.0%
ATCAAAAAAATCGAAGAAGC+TGG - chr4.1:25997974-25997993 MS.gene006725:CDS 30.0%
ATCACACTTCGTAATACTTA+AGG + chr4.1:25997397-25997416 None:intergenic 30.0%
CAGTAACTATTGTTAATGCA+GGG - chr4.1:25996492-25996511 MS.gene006725:intron 30.0%
CCCAATTTATTAATCATGGA+GGG - chr4.1:25997276-25997295 MS.gene006725:CDS 30.0%
CCCTCCATGATTAATAAATT+GGG + chr4.1:25997279-25997298 None:intergenic 30.0%
CTTCTATATTAGCAACAAAG+TGG - chr4.1:25996324-25996343 MS.gene006725:CDS 30.0%
GTTGATGCAAATATTGATCT+TGG - chr4.1:25996986-25997005 MS.gene006725:intron 30.0%
TAAACTCCAAAGACATAATG+TGG - chr4.1:25996214-25996233 MS.gene006725:CDS 30.0%
TCACACTTCGTAATACTTAA+GGG + chr4.1:25997396-25997415 None:intergenic 30.0%
! TGTGATATTTCAGATTTTCG+TGG - chr4.1:25997864-25997883 MS.gene006725:CDS 30.0%
!! ACCTACTATTTCTAGATTCT+AGG + chr4.1:25996577-25996596 None:intergenic 30.0%
!! ATTCTAGTTTAGGACTCTTT+CGG + chr4.1:25997650-25997669 None:intergenic 30.0%
ATGTCCAACTTCTTCAATGT+TGG + chr4.1:25996839-25996858 None:intergenic 35.0%
ATGTCTGCTAATACTTCACA+AGG + chr4.1:25997624-25997643 None:intergenic 35.0%
CACACTTCGTAATACTTAAG+GGG + chr4.1:25997395-25997414 None:intergenic 35.0%
CATAGTTAAGACACTAGCAA+GGG + chr4.1:25997533-25997552 None:intergenic 35.0%
CCAGTAACTATTGTTAATGC+AGG - chr4.1:25996491-25996510 MS.gene006725:intron 35.0%
CCTGCATTAACAATAGTTAC+TGG + chr4.1:25996494-25996513 None:intergenic 35.0%
CTAGGTTAAGTGTAAGATCA+TGG + chr4.1:25996559-25996578 None:intergenic 35.0%
GAAAATCAAAGACGGGTAAT+TGG + chr4.1:25996364-25996383 None:intergenic 35.0%
GAGATGAACATTTACTGTAC+AGG - chr4.1:25997945-25997964 MS.gene006725:CDS 35.0%
GCTATCAGATGAAACTATTC+AGG - chr4.1:25997096-25997115 MS.gene006725:intron 35.0%
GTCCTTCGAAAAATGTTACT+GGG - chr4.1:25996787-25996806 MS.gene006725:intron 35.0%
TACCTTCACAAATGAGAAGT+CGG - chr4.1:25996724-25996743 MS.gene006725:intron 35.0%
TATCACCCACATTATGTCTT+TGG + chr4.1:25996223-25996242 None:intergenic 35.0%
TATCCAACTTAGTCAATGAC+CGG + chr4.1:25996628-25996647 None:intergenic 35.0%
TATTCTTTCTCGTCTCTCTA+CGG - chr4.1:25996286-25996305 MS.gene006725:CDS 35.0%
TGTCCTTCGAAAAATGTTAC+TGG - chr4.1:25996786-25996805 MS.gene006725:intron 35.0%
TGTGTTACCCAATAGTTTCT+CGG - chr4.1:25996598-25996617 MS.gene006725:CDS 35.0%
TTAGGGATCTTACTTATCCT+TGG - chr4.1:25997782-25997801 MS.gene006725:CDS 35.0%
TTATTGTTAGCCGTTAAAGG+TGG + chr4.1:25997724-25997743 None:intergenic 35.0%
! AGAGAAGATTTGAAACAGCA+AGG + chr4.1:25997837-25997856 None:intergenic 35.0%
! CAACATGCAGTTCGTTATTT+TGG + chr4.1:25997024-25997043 None:intergenic 35.0%
!!! GAAGAGCTTTTTTATACGGT+TGG + chr4.1:25996462-25996481 None:intergenic 35.0%
AAGGACAACTCTTGTAAGAC+AGG + chr4.1:25996773-25996792 None:intergenic 40.0%
AGATGAAGCCGAAATCAGAT+TGG - chr4.1:25997887-25997906 MS.gene006725:CDS 40.0%
AGGAACCAATTGCAAGCTTT+AGG - chr4.1:25998005-25998024 MS.gene006725:CDS 40.0%
AGGACAACTCTTGTAAGACA+GGG + chr4.1:25996772-25996791 None:intergenic 40.0%
ATCCAACTTAGTCAATGACC+GGG + chr4.1:25996627-25996646 None:intergenic 40.0%
ATGATTAGCGATTTACCCGA+GGG - chr4.1:25996251-25996270 MS.gene006725:CDS 40.0%
CAACAAAGTGGAGATACTTG+TGG - chr4.1:25996336-25996355 MS.gene006725:CDS 40.0%
CTATGGAAACAGATACCATC+AGG + chr4.1:25996677-25996696 None:intergenic 40.0%
CTATGGAGGTAGAGTTAACA+AGG + chr4.1:25996967-25996986 None:intergenic 40.0%
GCATAGTTAAGACACTAGCA+AGG + chr4.1:25997534-25997553 None:intergenic 40.0%
GGATCTTACTTATCCTTGGA+TGG - chr4.1:25997786-25997805 MS.gene006725:CDS 40.0%
GGTGACTTAGAATTTCGCTT+TGG + chr4.1:25996398-25996417 None:intergenic 40.0%
GGTTGGATTTGTGAAGTAGT+TGG + chr4.1:25996445-25996464 None:intergenic 40.0%
TACCATCAGGTACAGAATCA+AGG + chr4.1:25996664-25996683 None:intergenic 40.0%
TATGATTAGCGATTTACCCG+AGG - chr4.1:25996250-25996269 MS.gene006725:CDS 40.0%
TTCCTTGATTCTGTACCTGA+TGG - chr4.1:25996659-25996678 MS.gene006725:CDS 40.0%
! GTCTTGCTCCAGATTTTCTT+CGG - chr4.1:25997698-25997717 MS.gene006725:CDS 40.0%
! TTTTCTTCGGCCACCTTTAA+CGG - chr4.1:25997711-25997730 MS.gene006725:CDS 40.0%
!! CAATTGCAAGCTTTAGGCAT+GGG - chr4.1:25998011-25998030 MS.gene006725:CDS 40.0%
!! CTCCCAGTAACATTTTTCGA+AGG + chr4.1:25996792-25996811 None:intergenic 40.0%
!!! CGGCTCAAAGACTTTTTTCT+GGG - chr4.1:25996744-25996763 MS.gene006725:intron 40.0%
!!! TCGGCTCAAAGACTTTTTTC+TGG - chr4.1:25996743-25996762 MS.gene006725:intron 40.0%
AAAGGTGGCCGAAGAAAATC+TGG + chr4.1:25997709-25997728 None:intergenic 45.0%
ACTAGATCTACGAGGCAATC+TGG + chr4.1:25996419-25996438 None:intergenic 45.0%
AGATTGCCTCGTAGATCTAG+TGG - chr4.1:25996418-25996437 MS.gene006725:CDS 45.0%
ATTGAGCTGTTCAGTCGTCT+TGG - chr4.1:25997055-25997074 MS.gene006725:intron 45.0%
CCATGCCTAAAGCTTGCAAT+TGG + chr4.1:25998013-25998032 None:intergenic 45.0%
CGCGTCAAATTCTTGAACGA+AGG + chr4.1:25997579-25997598 None:intergenic 45.0%
TATCCTTGGATGGTGAAGAC+TGG - chr4.1:25997796-25997815 MS.gene006725:CDS 45.0%
! AGCCGACTTCTCATTTGTGA+AGG + chr4.1:25996729-25996748 None:intergenic 45.0%
! ATCCCGGTCATTGACTAAGT+TGG - chr4.1:25996622-25996641 MS.gene006725:CDS 45.0%
!! CCAATTGCAAGCTTTAGGCA+TGG - chr4.1:25998010-25998029 MS.gene006725:CDS 45.0%
!! TCATTAACTTGCGTCACTCG+TGG - chr4.1:25998042-25998061 MS.gene006725:CDS 45.0%
!! TTGGTAGTGTCGAGTTTCTC+AGG - chr4.1:25997074-25997093 MS.gene006725:intron 45.0%
CCAATAGTTTCTCGGCATCC+CGG - chr4.1:25996606-25996625 MS.gene006725:CDS 50.0%
CGGGATGCCGAGAAACTATT+GGG + chr4.1:25996608-25996627 None:intergenic 50.0%
GTTGGTCCACTAGATCTACG+AGG + chr4.1:25996427-25996446 None:intergenic 50.0%
TGTCCAGTCTTCACCATCCA+AGG + chr4.1:25997802-25997821 None:intergenic 50.0%
TTCTCGTCTCTCTACGGAAG+AGG - chr4.1:25996292-25996311 MS.gene006725:CDS 50.0%
CCGGGATGCCGAGAAACTAT+TGG + chr4.1:25996609-25996628 None:intergenic 55.0%
CGAAGAAGCTGGCTGATGTG+AGG - chr4.1:25997985-25998004 MS.gene006725:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 25996182 25998070 25996182 ID=MS.gene006725
chr4.1 mRNA 25996182 25998070 25996182 ID=MS.gene006725.t1;Parent=MS.gene006725
chr4.1 exon 25997135 25998070 25997135 ID=MS.gene006725.t1.exon1;Parent=MS.gene006725.t1
chr4.1 CDS 25997135 25998070 25997135 ID=cds.MS.gene006725.t1;Parent=MS.gene006725.t1
chr4.1 exon 25996566 25996712 25996566 ID=MS.gene006725.t1.exon2;Parent=MS.gene006725.t1
chr4.1 CDS 25996566 25996712 25996566 ID=cds.MS.gene006725.t1;Parent=MS.gene006725.t1
chr4.1 exon 25996182 25996466 25996182 ID=MS.gene006725.t1.exon3;Parent=MS.gene006725.t1
chr4.1 CDS 25996182 25996466 25996182 ID=cds.MS.gene006725.t1;Parent=MS.gene006725.t1
Gene Sequence

>MS.gene006725

ATGGCTTCTACAATCTCATCATCAAATTTACATAAACTCCAAAGACATAATGTGGGTGATATGAAAGATATGATTAGCGATTTACCCGAGGGAATTCTTCATTATATTCTTTCTCGTCTCTCTACGGAAGAGGCTGTAAGAACTTCTATATTAGCAACAAAGTGGAGATACTTGTGGACCCAATTACCCGTCTTTGATTTTCGAGAATTATCTCCAAAGCGAAATTCTAAGTCACCAGATTGCCTCGTAGATCTAGTGGACCAACTACTTCACAAATCCAACCGTATAAAAAAGCTCTTCATTGAATTACCAGTAACTATTGTTAATGCAGGGAAAGTTAGTTCTATGTTAACTTCTGCATTGATGCATGATGTCCATGATCTTACACTTAACCTAGAATCTAGAAATAGTAGGTTTGTGTTACCCAATAGTTTCTCGGCATCCCGGTCATTGACTAAGTTGGATATAGTATTTGGCTTCCTTGATTCTGTACCTGATGGTATCTGTTTCCATAGCTTGAAGATATTATCTTTTGCACATCTTACCTTCACAAATGAGAAGTCGGCTCAAAGACTTTTTTCTGGGTGCCCTGTCTTACAAGAGTTGTCCTTCGAAAAATGTTACTGGGAGAACATAAACATTAGTGTTGCAATTCCAACATTGAAGAAGTTGGACATCTTTTTCAGATCTTCTAGTCTAGATCGTAACAGTTGTATGTTCGAAATTGATGCCGTGAATCTTTTATCTTTAAGTTACAAAAGTAACCCAACTATAAATTGTTTCCTTGTTAACTCTACCTCCATAGTTGATGCAAATATTGATCTTGGGTTTTTCTGTGTCCAAAATAACGAACTGCATGTTGCTGTATTTGCAATTGAGCTGTTCAGTCGTCTTGGTAGTGTCGAGTTTCTCAGGCTATCAGATGAAACTATTCAGGTATGTTTGAATGTTTACTTATTGTCTTCATTAATATAATATAATTATTGTACTCCTTTGTAATGAAATATAAGCAAATCTTAACCACTTCGATCTTATTTAACAATAGTATCTCTATGTTACCCCTCATTTAATTTAACTTTTTATATTTTCAATGACCCAATTTATTAATCATGGAGGGTAGTTTAGACAACTGACTTGATTTTTTTTTATAGGATTGCATCCATTAAATTTGATCAATTACATTTCTTAATAGGTTTAATAACAGTTTTGACCCCTTAAGTATTACGAAGTGTGATCAATTTATGTTTCTAATTTATAGATAATGTCTATTGTAAATGTTGATTGGTCATGTCCTTGTATTATTTGCATATTCTTTCAATATCACACCGATCTTGACTTGTTTTTGTTTCCCTTGCTAGTGTCTTAACTATGCAAAATCTGCTCTTCATCTTTTACCTTCGTTCAAGAATTTGACGCGTCTTGAAGTGCATTTCGATGATCCTTGTGAAGTATTAGCAGACATTCTCCGAAAGAGTCCTAAACTAGAATTTCTTCACATTTATGGGGTACATCTTGTGTCTTGCTCCAGATTTTCTTCGGCCACCTTTAACGGCTAACAATAATTTTATCTCAGTCTGTTGACTTGTGTATTGATTCTTGTTTAGGGATCTTACTTATCCTTGGATGGTGAAGACTGGACATCAGATTCATTGCCTTGCTGTTTCAAATCTTCTCTCAAATCATGTGATATTTCAGATTTTCGTGGAGATGAAGCCGAAATCAGATTGGTGAAGTTTTTGTTAAAAAATGTCACATTCTTAAGGGAGATGAACATTTACTGTACAGGATATCTATCAAAAAAATCGAAGAAGCTGGCTGATGTGAGGAACCAATTGCAAGCTTTAGGCATGGGAAGTTGTGTCATTAACTTGCGTCACTCGTGGTTTTGA

Protein sequence

>MS.gene006725.t1

MASTISSSNLHKLQRHNVGDMKDMISDLPEGILHYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRELSPKRNSKSPDCLVDLVDQLLHKSNRIKKLFIELPVTIVNAGKVSSMLTSALMHDVHDLTLNLESRNSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFHSLKILSFAHLTFTNEKSAQRLFSGCPVLQELSFEKCYWENINISVAIPTLKKLDIFFRSSSLDRNSCMFEIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVEFLRLSDETIQCLNYAKSALHLLPSFKNLTRLEVHFDDPCEVLADILRKSPKLEFLHIYGGSYLSLDGEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLKNVTFLREMNIYCTGYLSKKSKKLADVRNQLQALGMGSCVINLRHSWF