Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006692.t1 | XP_004505452.1 | 62.7 | 284 | 101 | 3 | 1 | 282 | 6 | 286 | 5.40E-87 | 331.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006692.t1 | Q3EAE5 | 33.3 | 219 | 138 | 5 | 19 | 232 | 2 | 217 | 1.3e-20 | 102.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006692.t1 | A0A1S2YIW0 | 62.7 | 284 | 101 | 3 | 1 | 282 | 6 | 286 | 3.9e-87 | 331.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006692.t1 | MTR_3g048290 | 57.595 | 316 | 125 | 4 | 1 | 313 | 5 | 314 | 4.59e-109 | 327 |
MS.gene006692.t1 | MTR_4g080787 | 55.623 | 329 | 121 | 7 | 3 | 318 | 6 | 322 | 2.81e-103 | 312 |
MS.gene006692.t1 | MTR_4g080773 | 54.407 | 329 | 128 | 6 | 3 | 318 | 6 | 325 | 2.05e-99 | 303 |
MS.gene006692.t1 | MTR_5g039970 | 51.786 | 336 | 151 | 5 | 1 | 332 | 1 | 329 | 2.46e-99 | 296 |
MS.gene006692.t1 | MTR_4g080773 | 54.407 | 329 | 128 | 6 | 3 | 318 | 6 | 325 | 3.03e-99 | 302 |
MS.gene006692.t1 | MTR_4g080590 | 49.394 | 330 | 149 | 5 | 1 | 326 | 5 | 320 | 5.27e-88 | 269 |
MS.gene006692.t1 | MTR_4g080590 | 49.394 | 330 | 149 | 5 | 1 | 326 | 5 | 320 | 7.86e-87 | 269 |
MS.gene006692.t1 | MTR_7g023310 | 51.049 | 286 | 125 | 6 | 1 | 278 | 5 | 283 | 5.35e-80 | 251 |
MS.gene006692.t1 | MTR_5g039950 | 46.729 | 321 | 120 | 5 | 1 | 318 | 5 | 277 | 1.39e-79 | 249 |
MS.gene006692.t1 | MTR_2g094750 | 46.364 | 330 | 152 | 9 | 17 | 323 | 88 | 415 | 1.29e-77 | 246 |
MS.gene006692.t1 | MTR_7g039630 | 45.483 | 321 | 134 | 3 | 1 | 318 | 5 | 287 | 3.20e-76 | 238 |
MS.gene006692.t1 | MTR_4g081030 | 44.620 | 316 | 147 | 8 | 9 | 318 | 7 | 300 | 1.60e-65 | 212 |
MS.gene006692.t1 | MTR_7g023330 | 41.615 | 322 | 117 | 6 | 2 | 318 | 3 | 258 | 6.71e-64 | 208 |
MS.gene006692.t1 | MTR_4g130200 | 41.379 | 319 | 113 | 6 | 1 | 318 | 5 | 250 | 9.16e-60 | 197 |
MS.gene006692.t1 | MTR_4g080807 | 45.902 | 244 | 91 | 4 | 89 | 332 | 1 | 203 | 8.66e-53 | 179 |
MS.gene006692.t1 | MTR_4g080813 | 62.651 | 83 | 28 | 2 | 1 | 80 | 1 | 83 | 1.53e-26 | 101 |
MS.gene006692.t1 | MTR_1g082260 | 36.774 | 155 | 95 | 1 | 72 | 223 | 23 | 177 | 1.29e-24 | 99.0 |
MS.gene006692.t1 | MTR_5g080710 | 31.925 | 213 | 133 | 4 | 19 | 226 | 33 | 238 | 7.41e-20 | 90.5 |
MS.gene006692.t1 | MTR_2g094450 | 55.814 | 86 | 37 | 1 | 194 | 278 | 31 | 116 | 2.32e-19 | 85.1 |
MS.gene006692.t1 | MTR_5g005690 | 27.876 | 226 | 152 | 4 | 7 | 226 | 5 | 225 | 1.15e-17 | 84.0 |
MS.gene006692.t1 | MTR_8g066650 | 29.231 | 325 | 192 | 10 | 12 | 323 | 73 | 372 | 2.25e-17 | 83.2 |
MS.gene006692.t1 | MTR_5g038430 | 30.804 | 224 | 141 | 7 | 10 | 226 | 87 | 303 | 4.56e-16 | 79.3 |
MS.gene006692.t1 | MTR_2g082850 | 31.474 | 251 | 137 | 11 | 1 | 229 | 1 | 238 | 4.78e-16 | 78.6 |
MS.gene006692.t1 | MTR_4g032730 | 26.332 | 319 | 192 | 10 | 10 | 311 | 4 | 296 | 6.08e-16 | 79.0 |
MS.gene006692.t1 | MTR_2g005990 | 30.542 | 203 | 121 | 5 | 19 | 205 | 6 | 204 | 1.14e-15 | 77.8 |
MS.gene006692.t1 | MTR_5g073340 | 33.514 | 185 | 91 | 7 | 19 | 201 | 8 | 162 | 5.30e-15 | 75.1 |
MS.gene006692.t1 | MTR_8g467800 | 26.087 | 322 | 210 | 8 | 10 | 322 | 11 | 313 | 5.86e-15 | 75.1 |
MS.gene006692.t1 | MTR_0049s0110 | 30.631 | 222 | 137 | 9 | 19 | 233 | 8 | 219 | 7.18e-15 | 74.3 |
MS.gene006692.t1 | MTR_3g108560 | 29.843 | 191 | 120 | 6 | 13 | 201 | 14 | 192 | 7.74e-15 | 74.7 |
MS.gene006692.t1 | MTR_0049s0110 | 32.632 | 190 | 116 | 7 | 19 | 203 | 8 | 190 | 1.21e-14 | 74.3 |
MS.gene006692.t1 | MTR_3g108560 | 29.843 | 191 | 120 | 6 | 13 | 201 | 14 | 192 | 1.30e-14 | 74.7 |
MS.gene006692.t1 | MTR_0049s0110 | 32.632 | 190 | 116 | 7 | 19 | 203 | 8 | 190 | 1.83e-14 | 73.6 |
MS.gene006692.t1 | MTR_0049s0110 | 30.631 | 222 | 137 | 9 | 19 | 233 | 8 | 219 | 2.28e-14 | 73.9 |
MS.gene006692.t1 | MTR_8g467800 | 25.786 | 318 | 208 | 8 | 10 | 318 | 11 | 309 | 2.51e-14 | 73.9 |
MS.gene006692.t1 | MTR_5g084070 | 31.250 | 208 | 131 | 3 | 19 | 224 | 13 | 210 | 3.45e-14 | 73.6 |
MS.gene006692.t1 | MTR_3g110010 | 27.356 | 329 | 201 | 10 | 18 | 338 | 12 | 310 | 3.53e-14 | 73.9 |
MS.gene006692.t1 | MTR_1g038710 | 26.129 | 310 | 201 | 10 | 19 | 317 | 19 | 311 | 5.20e-14 | 73.2 |
MS.gene006692.t1 | MTR_3g109982 | 27.356 | 329 | 201 | 10 | 18 | 338 | 12 | 310 | 5.81e-14 | 73.2 |
MS.gene006692.t1 | MTR_3g023470 | 28.440 | 327 | 203 | 13 | 8 | 323 | 2 | 308 | 1.27e-13 | 71.6 |
MS.gene006692.t1 | MTR_1g115245 | 27.064 | 218 | 146 | 4 | 10 | 224 | 17 | 224 | 1.44e-13 | 70.9 |
MS.gene006692.t1 | MTR_6g025160 | 25.283 | 265 | 183 | 5 | 1 | 262 | 83 | 335 | 1.44e-13 | 71.2 |
MS.gene006692.t1 | MTR_3g036250 | 28.947 | 190 | 121 | 5 | 19 | 201 | 5 | 187 | 1.63e-13 | 71.2 |
MS.gene006692.t1 | MTR_8g445780 | 31.188 | 202 | 122 | 8 | 11 | 203 | 6 | 199 | 2.14e-13 | 70.9 |
MS.gene006692.t1 | MTR_7g088260 | 32.212 | 208 | 106 | 7 | 13 | 205 | 85 | 272 | 2.19e-13 | 71.2 |
MS.gene006692.t1 | MTR_6g018660 | 27.762 | 353 | 197 | 14 | 1 | 324 | 1 | 324 | 2.73e-13 | 70.5 |
MS.gene006692.t1 | MTR_1g090883 | 25.559 | 313 | 209 | 7 | 11 | 317 | 11 | 305 | 3.48e-13 | 70.1 |
MS.gene006692.t1 | MTR_7g007080 | 29.688 | 192 | 122 | 4 | 18 | 201 | 3 | 189 | 3.61e-13 | 70.1 |
MS.gene006692.t1 | MTR_2g007500 | 30.151 | 199 | 120 | 5 | 19 | 213 | 14 | 197 | 4.22e-13 | 69.7 |
MS.gene006692.t1 | MTR_7g116580 | 27.575 | 301 | 162 | 10 | 17 | 280 | 1 | 282 | 4.73e-13 | 70.1 |
MS.gene006692.t1 | MTR_3g023630 | 29.412 | 187 | 122 | 5 | 19 | 201 | 8 | 188 | 1.11e-12 | 68.6 |
MS.gene006692.t1 | MTR_7g056447 | 30.049 | 203 | 132 | 5 | 18 | 217 | 8 | 203 | 1.19e-12 | 67.8 |
MS.gene006692.t1 | MTR_4g119700 | 30.093 | 216 | 119 | 8 | 18 | 206 | 5 | 215 | 1.53e-12 | 68.9 |
MS.gene006692.t1 | MTR_3g023270 | 27.778 | 216 | 112 | 6 | 10 | 206 | 3 | 193 | 1.75e-12 | 67.8 |
MS.gene006692.t1 | MTR_1g115250 | 30.000 | 240 | 136 | 10 | 7 | 222 | 20 | 251 | 2.26e-12 | 68.2 |
MS.gene006692.t1 | MTR_2g082860 | 46.341 | 82 | 41 | 2 | 7 | 87 | 14 | 93 | 2.28e-12 | 63.5 |
MS.gene006692.t1 | MTR_3g105060 | 31.551 | 187 | 117 | 5 | 19 | 201 | 14 | 193 | 2.30e-12 | 67.8 |
MS.gene006692.t1 | MTR_8g058965 | 27.551 | 294 | 174 | 13 | 10 | 278 | 4 | 283 | 2.72e-12 | 67.8 |
MS.gene006692.t1 | MTR_8g017280 | 30.469 | 128 | 72 | 4 | 18 | 138 | 35 | 152 | 2.80e-12 | 67.0 |
MS.gene006692.t1 | MTR_4g050930 | 24.286 | 350 | 209 | 14 | 6 | 337 | 16 | 327 | 3.09e-12 | 67.4 |
MS.gene006692.t1 | MTR_8g017280 | 30.469 | 128 | 72 | 4 | 18 | 138 | 35 | 152 | 3.43e-12 | 67.4 |
MS.gene006692.t1 | MTR_2g008310 | 30.808 | 198 | 118 | 5 | 19 | 208 | 2 | 188 | 3.91e-12 | 67.0 |
MS.gene006692.t1 | MTR_4g092980 | 24.444 | 315 | 207 | 9 | 21 | 323 | 16 | 311 | 4.38e-12 | 67.4 |
MS.gene006692.t1 | MTR_7g084080 | 26.923 | 260 | 163 | 9 | 13 | 260 | 11 | 255 | 4.73e-12 | 66.2 |
MS.gene006692.t1 | MTR_5g021550 | 36.290 | 124 | 66 | 5 | 18 | 131 | 18 | 138 | 6.24e-12 | 63.5 |
MS.gene006692.t1 | MTR_5g007410 | 31.429 | 210 | 119 | 8 | 21 | 215 | 28 | 227 | 6.62e-12 | 66.6 |
MS.gene006692.t1 | MTR_4g050930 | 24.286 | 350 | 209 | 14 | 6 | 337 | 16 | 327 | 6.96e-12 | 66.6 |
MS.gene006692.t1 | MTR_5g045510 | 30.435 | 184 | 119 | 5 | 21 | 201 | 14 | 191 | 6.97e-12 | 66.2 |
MS.gene006692.t1 | MTR_0543s0010 | 31.016 | 187 | 113 | 8 | 18 | 201 | 85 | 258 | 7.04e-12 | 66.6 |
MS.gene006692.t1 | MTR_0492s0020 | 31.016 | 187 | 113 | 8 | 18 | 201 | 85 | 258 | 7.23e-12 | 66.6 |
MS.gene006692.t1 | MTR_1g011430 | 30.303 | 231 | 132 | 10 | 19 | 237 | 7 | 220 | 8.19e-12 | 65.9 |
MS.gene006692.t1 | MTR_7g056433 | 29.648 | 199 | 118 | 5 | 16 | 203 | 9 | 196 | 9.64e-12 | 65.9 |
MS.gene006692.t1 | MTR_8g077460 | 29.952 | 207 | 114 | 7 | 18 | 203 | 9 | 205 | 9.87e-12 | 65.9 |
MS.gene006692.t1 | MTR_8g014260 | 28.615 | 325 | 177 | 17 | 18 | 316 | 15 | 310 | 1.02e-11 | 65.9 |
MS.gene006692.t1 | MTR_3g108150 | 31.351 | 185 | 118 | 5 | 18 | 201 | 12 | 188 | 1.07e-11 | 65.9 |
MS.gene006692.t1 | MTR_7g025650 | 28.704 | 216 | 122 | 7 | 18 | 206 | 18 | 228 | 1.47e-11 | 65.9 |
MS.gene006692.t1 | MTR_8g014160 | 29.851 | 201 | 119 | 8 | 18 | 201 | 40 | 235 | 1.64e-11 | 65.5 |
MS.gene006692.t1 | MTR_2g007360 | 26.667 | 270 | 129 | 9 | 19 | 271 | 12 | 229 | 1.76e-11 | 65.1 |
MS.gene006692.t1 | MTR_3g026920 | 29.464 | 224 | 128 | 8 | 19 | 224 | 19 | 230 | 1.80e-11 | 65.1 |
MS.gene006692.t1 | MTR_2g082800 | 28.761 | 226 | 147 | 6 | 8 | 228 | 18 | 234 | 1.84e-11 | 65.1 |
MS.gene006692.t1 | MTR_2g007530 | 42.045 | 88 | 48 | 1 | 19 | 103 | 19 | 106 | 1.97e-11 | 64.7 |
MS.gene006692.t1 | MTR_3g023440 | 26.791 | 321 | 194 | 13 | 17 | 323 | 1 | 294 | 2.41e-11 | 64.7 |
MS.gene006692.t1 | MTR_2g007450 | 27.536 | 207 | 120 | 5 | 19 | 201 | 16 | 216 | 2.99e-11 | 64.7 |
MS.gene006692.t1 | MTR_0227s0010 | 29.064 | 203 | 128 | 8 | 10 | 203 | 6 | 201 | 3.54e-11 | 63.9 |
MS.gene006692.t1 | MTR_3g019220 | 26.205 | 332 | 204 | 12 | 18 | 335 | 25 | 329 | 3.91e-11 | 64.7 |
MS.gene006692.t1 | MTR_7g055943 | 27.358 | 212 | 145 | 4 | 19 | 226 | 40 | 246 | 4.47e-11 | 63.9 |
MS.gene006692.t1 | MTR_4g051480 | 25.726 | 241 | 154 | 10 | 1 | 228 | 9 | 237 | 4.90e-11 | 64.3 |
MS.gene006692.t1 | MTR_4g092300 | 25.210 | 238 | 154 | 9 | 4 | 228 | 11 | 237 | 5.09e-11 | 64.3 |
MS.gene006692.t1 | MTR_5g058000 | 28.571 | 196 | 111 | 5 | 19 | 201 | 8 | 187 | 5.23e-11 | 63.5 |
MS.gene006692.t1 | MTR_3g107100 | 28.497 | 193 | 123 | 6 | 16 | 201 | 8 | 192 | 5.29e-11 | 63.5 |
MS.gene006692.t1 | MTR_1g038760 | 28.054 | 221 | 131 | 8 | 10 | 221 | 6 | 207 | 5.73e-11 | 63.5 |
MS.gene006692.t1 | MTR_3g036320 | 25.000 | 316 | 203 | 12 | 21 | 323 | 22 | 316 | 5.77e-11 | 63.5 |
MS.gene006692.t1 | MTR_8g062270 | 28.571 | 203 | 127 | 4 | 16 | 203 | 13 | 212 | 5.80e-11 | 63.5 |
MS.gene006692.t1 | MTR_1g053025 | 30.415 | 217 | 132 | 9 | 19 | 222 | 2 | 212 | 6.18e-11 | 63.5 |
MS.gene006692.t1 | MTR_1g038760 | 28.054 | 221 | 131 | 8 | 10 | 221 | 6 | 207 | 6.70e-11 | 63.2 |
MS.gene006692.t1 | MTR_7g032380 | 26.344 | 186 | 129 | 5 | 19 | 201 | 11 | 191 | 7.49e-11 | 63.2 |
MS.gene006692.t1 | MTR_6g088700 | 23.734 | 316 | 214 | 8 | 16 | 323 | 11 | 307 | 7.91e-11 | 63.2 |
MS.gene006692.t1 | MTR_5g092960 | 24.316 | 329 | 226 | 8 | 1 | 316 | 1 | 319 | 9.01e-11 | 63.2 |
MS.gene006692.t1 | MTR_5g058100 | 29.293 | 198 | 122 | 6 | 12 | 201 | 2 | 189 | 9.47e-11 | 62.8 |
MS.gene006692.t1 | MTR_2g007400 | 32.020 | 203 | 117 | 9 | 19 | 204 | 12 | 210 | 9.58e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006692.t1 | AT5G53840 | 31.439 | 264 | 169 | 4 | 15 | 278 | 14 | 265 | 3.01e-24 | 103 |
MS.gene006692.t1 | AT4G00315 | 33.040 | 227 | 138 | 6 | 19 | 234 | 2 | 225 | 5.21e-24 | 102 |
MS.gene006692.t1 | AT4G14103 | 29.073 | 313 | 201 | 10 | 18 | 319 | 7 | 309 | 1.48e-23 | 100 |
MS.gene006692.t1 | AT4G14103 | 29.073 | 313 | 201 | 10 | 18 | 319 | 7 | 309 | 1.48e-23 | 100 |
MS.gene006692.t1 | AT4G14103 | 29.073 | 313 | 201 | 10 | 18 | 319 | 7 | 309 | 2.52e-23 | 100 |
MS.gene006692.t1 | AT1G66290 | 29.808 | 312 | 202 | 8 | 12 | 319 | 22 | 320 | 5.01e-23 | 99.8 |
MS.gene006692.t1 | AT1G55660 | 33.036 | 224 | 142 | 5 | 14 | 232 | 48 | 268 | 8.41e-23 | 98.2 |
MS.gene006692.t1 | AT4G14096 | 29.967 | 307 | 199 | 10 | 18 | 319 | 7 | 302 | 2.64e-22 | 97.8 |
MS.gene006692.t1 | AT4G14096 | 29.967 | 307 | 199 | 10 | 18 | 319 | 7 | 302 | 2.64e-22 | 97.8 |
MS.gene006692.t1 | AT1G55660 | 33.036 | 224 | 142 | 5 | 14 | 232 | 48 | 268 | 2.78e-22 | 97.8 |
MS.gene006692.t1 | AT3G26922 | 29.864 | 221 | 147 | 3 | 11 | 229 | 6 | 220 | 3.32e-22 | 95.5 |
MS.gene006692.t1 | AT3G26922 | 29.864 | 221 | 147 | 3 | 11 | 229 | 6 | 220 | 3.32e-22 | 95.5 |
MS.gene006692.t1 | AT3G59200 | 28.049 | 328 | 195 | 11 | 18 | 319 | 6 | 318 | 3.97e-21 | 93.2 |
MS.gene006692.t1 | AT3G58880 | 27.273 | 330 | 189 | 13 | 17 | 319 | 1 | 306 | 8.41e-21 | 93.2 |
MS.gene006692.t1 | AT3G59210 | 30.841 | 321 | 190 | 13 | 18 | 319 | 6 | 313 | 1.07e-20 | 93.2 |
MS.gene006692.t1 | AT3G59210 | 30.841 | 321 | 190 | 13 | 18 | 319 | 6 | 313 | 1.07e-20 | 93.2 |
MS.gene006692.t1 | AT3G59210 | 30.841 | 321 | 190 | 13 | 18 | 319 | 6 | 313 | 1.07e-20 | 93.2 |
MS.gene006692.t1 | AT3G59210 | 30.841 | 321 | 190 | 13 | 18 | 319 | 6 | 313 | 1.07e-20 | 93.2 |
MS.gene006692.t1 | AT3G59210 | 30.841 | 321 | 190 | 13 | 18 | 319 | 6 | 313 | 1.07e-20 | 93.2 |
MS.gene006692.t1 | AT1G32375 | 30.516 | 213 | 140 | 3 | 19 | 227 | 2 | 210 | 1.08e-20 | 92.8 |
MS.gene006692.t1 | AT1G32375 | 30.516 | 213 | 140 | 3 | 19 | 227 | 2 | 210 | 1.08e-20 | 92.8 |
MS.gene006692.t1 | AT3G58860 | 27.832 | 309 | 198 | 11 | 19 | 319 | 7 | 298 | 1.09e-20 | 92.8 |
MS.gene006692.t1 | AT3G59200 | 28.049 | 328 | 195 | 11 | 18 | 319 | 6 | 318 | 1.23e-20 | 93.2 |
MS.gene006692.t1 | AT1G66300 | 27.937 | 315 | 194 | 9 | 19 | 319 | 29 | 324 | 1.35e-20 | 92.8 |
MS.gene006692.t1 | AT1G58310 | 28.994 | 338 | 201 | 11 | 13 | 319 | 2 | 331 | 8.75e-20 | 90.5 |
MS.gene006692.t1 | AT3G58900 | 27.660 | 329 | 193 | 11 | 19 | 319 | 2 | 313 | 1.12e-19 | 88.6 |
MS.gene006692.t1 | AT3G58900 | 27.660 | 329 | 193 | 11 | 19 | 319 | 2 | 313 | 1.15e-19 | 88.6 |
MS.gene006692.t1 | AT3G58900 | 27.660 | 329 | 193 | 11 | 19 | 319 | 2 | 313 | 1.15e-19 | 88.6 |
MS.gene006692.t1 | AT4G13985 | 27.044 | 318 | 208 | 11 | 15 | 319 | 15 | 321 | 2.85e-19 | 89.0 |
MS.gene006692.t1 | AT3G58900 | 27.660 | 329 | 193 | 11 | 19 | 319 | 2 | 313 | 4.50e-19 | 88.2 |
MS.gene006692.t1 | AT4G10400 | 30.918 | 207 | 139 | 3 | 19 | 224 | 2 | 205 | 5.09e-19 | 87.8 |
MS.gene006692.t1 | AT4G10400 | 30.918 | 207 | 139 | 3 | 19 | 224 | 2 | 205 | 5.09e-19 | 87.8 |
MS.gene006692.t1 | AT4G10400 | 30.918 | 207 | 139 | 3 | 19 | 224 | 2 | 205 | 5.09e-19 | 87.8 |
MS.gene006692.t1 | AT2G04230 | 34.101 | 217 | 132 | 5 | 18 | 227 | 12 | 224 | 9.86e-19 | 87.0 |
MS.gene006692.t1 | AT4G15060 | 28.226 | 248 | 165 | 6 | 13 | 254 | 18 | 258 | 1.06e-18 | 87.0 |
MS.gene006692.t1 | AT1G55030 | 29.224 | 219 | 142 | 4 | 12 | 227 | 2 | 210 | 1.15e-18 | 86.7 |
MS.gene006692.t1 | AT1G55030 | 29.224 | 219 | 142 | 4 | 12 | 227 | 12 | 220 | 1.30e-18 | 86.7 |
MS.gene006692.t1 | AT5G22660 | 27.597 | 308 | 211 | 5 | 18 | 321 | 12 | 311 | 1.48e-18 | 85.5 |
MS.gene006692.t1 | AT5G56420 | 28.852 | 305 | 177 | 10 | 18 | 312 | 5 | 279 | 2.88e-18 | 85.5 |
MS.gene006692.t1 | AT5G56420 | 28.852 | 305 | 177 | 10 | 18 | 312 | 5 | 279 | 2.88e-18 | 85.5 |
MS.gene006692.t1 | AT5G56420 | 28.852 | 305 | 177 | 10 | 18 | 312 | 5 | 279 | 2.88e-18 | 85.5 |
MS.gene006692.t1 | AT4G00160 | 30.876 | 217 | 140 | 4 | 18 | 229 | 15 | 226 | 3.50e-18 | 85.5 |
MS.gene006692.t1 | AT3G59240 | 26.667 | 315 | 204 | 9 | 18 | 319 | 7 | 307 | 4.54e-18 | 85.5 |
MS.gene006692.t1 | AT1G06630 | 28.481 | 316 | 189 | 13 | 18 | 319 | 11 | 303 | 4.69e-18 | 83.6 |
MS.gene006692.t1 | AT3G59230 | 25.356 | 351 | 230 | 10 | 10 | 336 | 4 | 346 | 6.25e-18 | 85.1 |
MS.gene006692.t1 | AT3G49150 | 26.814 | 317 | 219 | 8 | 18 | 328 | 15 | 324 | 7.63e-18 | 84.7 |
MS.gene006692.t1 | AT3G59160 | 27.059 | 340 | 205 | 11 | 18 | 319 | 12 | 346 | 9.28e-18 | 84.3 |
MS.gene006692.t1 | AT4G22280 | 29.924 | 264 | 160 | 7 | 19 | 274 | 2 | 248 | 1.17e-17 | 83.2 |
MS.gene006692.t1 | AT1G06630 | 28.481 | 316 | 189 | 13 | 18 | 319 | 11 | 303 | 1.34e-17 | 83.2 |
MS.gene006692.t1 | AT1G06630 | 28.481 | 316 | 189 | 13 | 18 | 319 | 11 | 303 | 1.34e-17 | 83.2 |
MS.gene006692.t1 | AT4G22280 | 29.924 | 264 | 160 | 7 | 19 | 274 | 2 | 248 | 1.46e-17 | 83.6 |
MS.gene006692.t1 | AT3G59170 | 27.035 | 344 | 203 | 12 | 18 | 319 | 6 | 343 | 1.49e-17 | 84.0 |
MS.gene006692.t1 | AT5G44950 | 27.974 | 311 | 203 | 9 | 18 | 319 | 3 | 301 | 1.60e-17 | 83.6 |
MS.gene006692.t1 | AT1G66310 | 28.963 | 328 | 206 | 11 | 1 | 319 | 1 | 310 | 1.63e-17 | 83.6 |
MS.gene006692.t1 | AT1G51370 | 28.829 | 222 | 132 | 5 | 14 | 227 | 14 | 217 | 1.77e-17 | 82.8 |
MS.gene006692.t1 | AT5G38590 | 28.788 | 330 | 207 | 9 | 19 | 339 | 2 | 312 | 1.95e-17 | 83.2 |
MS.gene006692.t1 | AT5G38590 | 32.547 | 212 | 133 | 4 | 19 | 227 | 2 | 206 | 1.99e-17 | 81.6 |
MS.gene006692.t1 | AT1G06630 | 28.481 | 316 | 189 | 13 | 18 | 319 | 20 | 312 | 2.36e-17 | 82.8 |
MS.gene006692.t1 | AT1G06630 | 28.481 | 316 | 189 | 13 | 18 | 319 | 11 | 303 | 2.45e-17 | 82.8 |
MS.gene006692.t1 | AT1G06630 | 28.481 | 316 | 189 | 13 | 18 | 319 | 11 | 303 | 2.45e-17 | 82.8 |
MS.gene006692.t1 | AT1G06630 | 28.481 | 316 | 189 | 13 | 18 | 319 | 11 | 303 | 2.45e-17 | 82.8 |
MS.gene006692.t1 | AT1G06630 | 28.481 | 316 | 189 | 13 | 18 | 319 | 11 | 303 | 2.45e-17 | 82.8 |
MS.gene006692.t1 | AT1G06630 | 28.481 | 316 | 189 | 13 | 18 | 319 | 11 | 303 | 2.49e-17 | 83.2 |
MS.gene006692.t1 | AT5G22720 | 30.556 | 252 | 148 | 8 | 18 | 258 | 22 | 257 | 2.57e-17 | 83.2 |
MS.gene006692.t1 | AT1G51370 | 28.829 | 222 | 132 | 5 | 14 | 227 | 14 | 217 | 3.26e-17 | 82.4 |
MS.gene006692.t1 | AT4G09920 | 28.261 | 230 | 157 | 4 | 19 | 247 | 2 | 224 | 3.91e-17 | 80.9 |
MS.gene006692.t1 | AT4G09920 | 28.261 | 230 | 157 | 4 | 19 | 247 | 2 | 224 | 3.91e-17 | 80.9 |
MS.gene006692.t1 | AT4G09920 | 28.261 | 230 | 157 | 4 | 19 | 247 | 2 | 224 | 3.91e-17 | 80.9 |
MS.gene006692.t1 | AT5G22660 | 27.124 | 306 | 211 | 5 | 18 | 319 | 12 | 309 | 3.93e-17 | 82.4 |
MS.gene006692.t1 | AT4G15060 | 28.395 | 243 | 162 | 6 | 16 | 254 | 170 | 404 | 4.12e-17 | 82.8 |
MS.gene006692.t1 | AT1G51370 | 28.829 | 222 | 132 | 5 | 14 | 227 | 14 | 217 | 4.39e-17 | 82.0 |
MS.gene006692.t1 | AT5G22670 | 26.490 | 302 | 216 | 2 | 18 | 319 | 10 | 305 | 4.49e-17 | 82.4 |
MS.gene006692.t1 | AT4G09920 | 28.261 | 230 | 157 | 4 | 19 | 247 | 2 | 224 | 8.34e-17 | 80.5 |
MS.gene006692.t1 | AT4G09920 | 28.261 | 230 | 157 | 4 | 19 | 247 | 2 | 224 | 8.34e-17 | 80.5 |
MS.gene006692.t1 | AT2G42730 | 28.037 | 321 | 199 | 11 | 16 | 319 | 2 | 307 | 9.90e-17 | 81.3 |
MS.gene006692.t1 | AT4G13965 | 29.108 | 213 | 137 | 3 | 19 | 227 | 10 | 212 | 2.88e-16 | 79.7 |
MS.gene006692.t1 | AT4G26340 | 27.609 | 297 | 187 | 9 | 19 | 312 | 2 | 273 | 5.59e-16 | 79.0 |
MS.gene006692.t1 | AT3G52680 | 31.646 | 237 | 142 | 8 | 1 | 227 | 1 | 227 | 5.67e-16 | 78.6 |
MS.gene006692.t1 | AT1G13570 | 28.852 | 305 | 163 | 13 | 14 | 310 | 1 | 259 | 7.24e-16 | 77.4 |
MS.gene006692.t1 | AT4G13960 | 27.586 | 319 | 198 | 13 | 19 | 319 | 2 | 305 | 9.31e-16 | 78.6 |
MS.gene006692.t1 | AT4G13960 | 27.586 | 319 | 198 | 13 | 19 | 319 | 2 | 305 | 9.31e-16 | 78.6 |
MS.gene006692.t1 | AT2G29930 | 28.783 | 337 | 175 | 14 | 10 | 319 | 4 | 302 | 1.08e-15 | 78.2 |
MS.gene006692.t1 | AT2G29930 | 28.783 | 337 | 175 | 14 | 10 | 319 | 4 | 302 | 1.08e-15 | 78.2 |
MS.gene006692.t1 | AT3G52680 | 32.203 | 236 | 142 | 8 | 1 | 227 | 1 | 227 | 1.18e-15 | 78.2 |
MS.gene006692.t1 | AT3G44810 | 29.213 | 267 | 168 | 9 | 24 | 278 | 12 | 269 | 2.02e-15 | 77.4 |
MS.gene006692.t1 | AT1G16930 | 26.994 | 326 | 215 | 9 | 19 | 334 | 15 | 327 | 2.40e-15 | 77.0 |
MS.gene006692.t1 | AT1G16930 | 26.994 | 326 | 215 | 9 | 19 | 334 | 15 | 327 | 2.40e-15 | 77.0 |
MS.gene006692.t1 | AT1G16930 | 26.994 | 326 | 215 | 9 | 19 | 334 | 15 | 327 | 2.40e-15 | 77.0 |
MS.gene006692.t1 | AT1G13570 | 28.852 | 305 | 163 | 13 | 14 | 310 | 1 | 259 | 2.86e-15 | 76.6 |
MS.gene006692.t1 | AT1G13570 | 28.852 | 305 | 163 | 13 | 14 | 310 | 1 | 259 | 2.86e-15 | 76.6 |
MS.gene006692.t1 | AT5G56410 | 26.885 | 305 | 184 | 7 | 26 | 312 | 10 | 293 | 3.60e-15 | 76.6 |
MS.gene006692.t1 | AT1G05080 | 27.829 | 327 | 208 | 10 | 18 | 340 | 12 | 314 | 6.12e-15 | 75.9 |
MS.gene006692.t1 | AT5G02930 | 29.703 | 202 | 127 | 6 | 19 | 219 | 28 | 215 | 6.22e-15 | 75.9 |
MS.gene006692.t1 | AT5G56690 | 29.048 | 210 | 140 | 4 | 21 | 224 | 4 | 210 | 6.45e-15 | 75.5 |
MS.gene006692.t1 | AT5G38570 | 30.144 | 209 | 100 | 5 | 19 | 224 | 2 | 167 | 6.46e-15 | 75.5 |
MS.gene006692.t1 | AT3G03040 | 23.837 | 344 | 219 | 13 | 19 | 336 | 2 | 328 | 6.49e-15 | 75.9 |
MS.gene006692.t1 | AT5G56440 | 31.579 | 209 | 136 | 5 | 19 | 225 | 2 | 205 | 6.59e-15 | 75.9 |
MS.gene006692.t1 | AT5G22700 | 26.724 | 348 | 216 | 11 | 10 | 339 | 34 | 360 | 7.02e-15 | 75.9 |
MS.gene006692.t1 | AT5G27750 | 23.235 | 340 | 229 | 12 | 19 | 338 | 5 | 332 | 7.57e-15 | 75.1 |
MS.gene006692.t1 | AT1G78750 | 28.438 | 320 | 195 | 12 | 19 | 319 | 18 | 322 | 8.82e-15 | 75.5 |
MS.gene006692.t1 | AT1G78750 | 28.438 | 320 | 195 | 12 | 19 | 319 | 18 | 322 | 8.82e-15 | 75.5 |
MS.gene006692.t1 | AT5G27750 | 23.599 | 339 | 229 | 12 | 19 | 338 | 5 | 332 | 8.84e-15 | 75.5 |
MS.gene006692.t1 | AT3G26922 | 26.904 | 197 | 136 | 3 | 35 | 229 | 1 | 191 | 9.05e-15 | 73.9 |
MS.gene006692.t1 | AT3G26922 | 26.904 | 197 | 136 | 3 | 35 | 229 | 1 | 191 | 9.05e-15 | 73.9 |
MS.gene006692.t1 | AT5G52460 | 31.111 | 225 | 118 | 3 | 18 | 242 | 16 | 203 | 1.34e-14 | 74.3 |
MS.gene006692.t1 | AT2G26030 | 24.684 | 316 | 208 | 12 | 19 | 319 | 4 | 304 | 1.36e-14 | 74.7 |
MS.gene006692.t1 | AT2G26030 | 24.684 | 316 | 208 | 12 | 19 | 319 | 4 | 304 | 1.47e-14 | 74.7 |
MS.gene006692.t1 | AT2G26030 | 24.684 | 316 | 208 | 12 | 19 | 319 | 4 | 304 | 1.47e-14 | 74.7 |
MS.gene006692.t1 | AT3G50710 | 29.767 | 215 | 139 | 5 | 19 | 226 | 2 | 211 | 3.39e-14 | 73.6 |
MS.gene006692.t1 | AT5G41630 | 25.141 | 354 | 224 | 12 | 13 | 336 | 6 | 348 | 3.80e-14 | 73.6 |
MS.gene006692.t1 | AT5G44490 | 28.507 | 221 | 142 | 5 | 18 | 230 | 16 | 228 | 3.88e-14 | 73.6 |
MS.gene006692.t1 | AT5G44490 | 28.507 | 221 | 142 | 5 | 18 | 230 | 16 | 228 | 4.06e-14 | 73.6 |
MS.gene006692.t1 | AT5G44980 | 27.044 | 318 | 205 | 12 | 18 | 323 | 3 | 305 | 4.39e-14 | 72.4 |
MS.gene006692.t1 | AT5G44980 | 27.044 | 318 | 205 | 12 | 18 | 323 | 3 | 305 | 4.39e-14 | 72.4 |
MS.gene006692.t1 | AT5G22700 | 26.744 | 344 | 213 | 11 | 14 | 339 | 1 | 323 | 5.38e-14 | 72.8 |
MS.gene006692.t1 | AT5G22700 | 26.744 | 344 | 213 | 11 | 14 | 339 | 1 | 323 | 5.38e-14 | 72.8 |
MS.gene006692.t1 | AT5G22700 | 26.744 | 344 | 213 | 11 | 14 | 339 | 1 | 323 | 5.38e-14 | 72.8 |
MS.gene006692.t1 | AT5G22700 | 26.744 | 344 | 213 | 11 | 14 | 339 | 1 | 323 | 5.38e-14 | 72.8 |
MS.gene006692.t1 | AT1G78730 | 26.349 | 315 | 180 | 9 | 19 | 319 | 22 | 298 | 6.38e-14 | 72.8 |
MS.gene006692.t1 | AT3G28410 | 23.636 | 330 | 193 | 11 | 8 | 319 | 19 | 307 | 6.49e-14 | 72.8 |
MS.gene006692.t1 | AT1G69630 | 26.727 | 333 | 205 | 13 | 5 | 319 | 4 | 315 | 7.41e-14 | 72.8 |
MS.gene006692.t1 | AT3G59190 | 25.148 | 338 | 207 | 13 | 10 | 319 | 4 | 323 | 9.15e-14 | 72.0 |
MS.gene006692.t1 | AT3G49030 | 31.050 | 219 | 136 | 8 | 18 | 230 | 20 | 229 | 9.21e-14 | 72.0 |
MS.gene006692.t1 | AT3G59190 | 24.294 | 354 | 222 | 13 | 10 | 335 | 4 | 339 | 9.66e-14 | 72.4 |
MS.gene006692.t1 | AT5G25860 | 26.023 | 342 | 214 | 16 | 18 | 336 | 11 | 336 | 1.04e-13 | 72.0 |
MS.gene006692.t1 | AT3G49030 | 31.050 | 219 | 136 | 8 | 18 | 230 | 20 | 229 | 1.42e-13 | 71.6 |
MS.gene006692.t1 | AT4G27050 | 29.952 | 207 | 118 | 5 | 19 | 204 | 4 | 204 | 3.19e-13 | 70.9 |
MS.gene006692.t1 | AT4G27050 | 29.952 | 207 | 118 | 5 | 19 | 204 | 4 | 204 | 3.19e-13 | 70.9 |
MS.gene006692.t1 | AT4G27050 | 29.952 | 207 | 118 | 5 | 19 | 204 | 4 | 204 | 3.19e-13 | 70.9 |
MS.gene006692.t1 | AT4G27050 | 29.952 | 207 | 118 | 5 | 19 | 204 | 4 | 204 | 3.19e-13 | 70.9 |
MS.gene006692.t1 | AT4G27050 | 29.952 | 207 | 118 | 5 | 19 | 204 | 4 | 204 | 3.19e-13 | 70.9 |
MS.gene006692.t1 | AT3G58960 | 28.173 | 323 | 206 | 14 | 19 | 330 | 2 | 309 | 3.39e-13 | 70.5 |
MS.gene006692.t1 | AT5G53635 | 29.493 | 217 | 132 | 6 | 20 | 227 | 1 | 205 | 3.57e-13 | 70.5 |
MS.gene006692.t1 | AT5G60610 | 30.275 | 218 | 138 | 5 | 19 | 232 | 2 | 209 | 5.47e-13 | 69.7 |
MS.gene006692.t1 | AT5G60610 | 30.275 | 218 | 138 | 5 | 19 | 232 | 2 | 209 | 5.47e-13 | 69.7 |
MS.gene006692.t1 | AT5G22730 | 27.974 | 311 | 205 | 9 | 18 | 318 | 27 | 328 | 6.89e-13 | 69.3 |
MS.gene006692.t1 | AT5G22730 | 29.707 | 239 | 157 | 6 | 18 | 250 | 27 | 260 | 6.91e-13 | 69.7 |
MS.gene006692.t1 | AT5G22730 | 29.707 | 239 | 157 | 6 | 18 | 250 | 27 | 260 | 6.91e-13 | 69.7 |
MS.gene006692.t1 | AT2G26860 | 28.319 | 226 | 148 | 5 | 19 | 235 | 2 | 222 | 7.24e-13 | 69.3 |
MS.gene006692.t1 | AT2G26860 | 28.319 | 226 | 148 | 5 | 19 | 235 | 2 | 222 | 7.24e-13 | 69.3 |
MS.gene006692.t1 | AT3G51530 | 27.604 | 192 | 129 | 4 | 18 | 208 | 29 | 211 | 7.47e-13 | 69.7 |
MS.gene006692.t1 | AT5G53640 | 28.497 | 193 | 116 | 5 | 18 | 203 | 21 | 198 | 8.27e-13 | 67.4 |
MS.gene006692.t1 | AT3G49040 | 27.193 | 228 | 141 | 8 | 18 | 232 | 16 | 231 | 1.17e-12 | 68.2 |
MS.gene006692.t1 | AT5G41830 | 24.412 | 340 | 209 | 12 | 18 | 326 | 12 | 334 | 1.47e-12 | 68.9 |
MS.gene006692.t1 | AT5G22610 | 24.149 | 323 | 209 | 10 | 17 | 319 | 16 | 322 | 1.89e-12 | 68.6 |
MS.gene006692.t1 | AT4G00320 | 26.023 | 342 | 201 | 12 | 18 | 326 | 12 | 334 | 2.03e-12 | 68.6 |
MS.gene006692.t1 | AT3G44060 | 28.155 | 206 | 138 | 3 | 24 | 220 | 4 | 208 | 2.33e-12 | 68.2 |
MS.gene006692.t1 | AT5G02700 | 29.126 | 206 | 125 | 7 | 7 | 208 | 17 | 205 | 2.72e-12 | 67.8 |
MS.gene006692.t1 | AT5G50270 | 26.518 | 313 | 204 | 8 | 19 | 327 | 2 | 292 | 2.77e-12 | 67.0 |
MS.gene006692.t1 | AT3G03030 | 24.534 | 322 | 216 | 12 | 19 | 319 | 2 | 317 | 4.86e-12 | 66.6 |
MS.gene006692.t1 | AT2G42720 | 28.213 | 319 | 192 | 12 | 19 | 319 | 2 | 301 | 5.59e-12 | 67.0 |
MS.gene006692.t1 | AT5G44980 | 26.710 | 307 | 198 | 12 | 18 | 312 | 3 | 294 | 7.54e-12 | 66.6 |
MS.gene006692.t1 | AT5G44980 | 26.710 | 307 | 198 | 12 | 18 | 312 | 3 | 294 | 7.54e-12 | 66.6 |
MS.gene006692.t1 | AT5G22700 | 26.552 | 290 | 181 | 8 | 10 | 285 | 34 | 305 | 9.00e-12 | 66.2 |
MS.gene006692.t1 | AT4G26350 | 29.101 | 189 | 123 | 4 | 19 | 203 | 2 | 183 | 9.90e-12 | 66.2 |
MS.gene006692.t1 | AT3G03030 | 24.534 | 322 | 216 | 12 | 19 | 319 | 2 | 317 | 1.02e-11 | 66.2 |
MS.gene006692.t1 | AT1G78760 | 26.282 | 312 | 203 | 10 | 18 | 319 | 15 | 309 | 1.03e-11 | 66.2 |
MS.gene006692.t1 | AT3G26930 | 27.000 | 300 | 190 | 7 | 18 | 313 | 20 | 294 | 1.09e-11 | 65.9 |
MS.gene006692.t1 | AT3G42770 | 23.839 | 323 | 219 | 9 | 24 | 335 | 4 | 310 | 1.14e-11 | 66.2 |
MS.gene006692.t1 | AT5G38396 | 24.848 | 330 | 200 | 13 | 19 | 319 | 2 | 312 | 1.36e-11 | 65.9 |
MS.gene006692.t1 | AT5G41840 | 25.287 | 348 | 213 | 11 | 14 | 325 | 9 | 345 | 1.58e-11 | 65.9 |
MS.gene006692.t1 | AT5G50270 | 27.027 | 296 | 190 | 8 | 19 | 310 | 2 | 275 | 1.58e-11 | 65.5 |
MS.gene006692.t1 | AT5G44960 | 25.969 | 258 | 161 | 11 | 19 | 263 | 5 | 245 | 1.69e-11 | 65.5 |
MS.gene006692.t1 | AT5G56810 | 29.353 | 201 | 126 | 8 | 11 | 203 | 5 | 197 | 2.32e-11 | 64.3 |
MS.gene006692.t1 | AT5G22610 | 24.051 | 316 | 188 | 11 | 17 | 319 | 16 | 292 | 2.34e-11 | 65.1 |
MS.gene006692.t1 | AT1G22000 | 30.317 | 221 | 129 | 5 | 21 | 237 | 31 | 230 | 2.51e-11 | 65.1 |
MS.gene006692.t1 | AT5G56810 | 29.353 | 201 | 126 | 8 | 11 | 203 | 5 | 197 | 2.59e-11 | 64.7 |
MS.gene006692.t1 | AT5G02910 | 46.667 | 60 | 32 | 0 | 16 | 75 | 8 | 67 | 3.05e-11 | 64.3 |
MS.gene006692.t1 | AT5G02910 | 46.667 | 60 | 32 | 0 | 16 | 75 | 8 | 67 | 3.15e-11 | 64.3 |
MS.gene006692.t1 | AT5G02910 | 46.667 | 60 | 32 | 0 | 16 | 75 | 8 | 67 | 5.06e-11 | 63.9 |
MS.gene006692.t1 | AT3G58980 | 26.032 | 315 | 192 | 11 | 19 | 312 | 2 | 296 | 5.65e-11 | 63.9 |
MS.gene006692.t1 | AT1G64540 | 26.398 | 322 | 195 | 11 | 18 | 319 | 4 | 303 | 6.83e-11 | 63.5 |
MS.gene006692.t1 | AT1G64540 | 26.398 | 322 | 195 | 11 | 18 | 319 | 4 | 303 | 6.83e-11 | 63.5 |
Find 49 sgRNAs with CRISPR-Local
Find 55 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCATTATCCTTGACGATAT+TGG | 0.202752 | 4.1:+26258824 | None:intergenic |
ATGTTGCGATTTCCACATTA+AGG | 0.206909 | 4.1:-26259175 | MS.gene006692:CDS |
AGAGGGATAAATTCTATTAT+TGG | 0.223816 | 4.1:+26259044 | None:intergenic |
ACTTGAAATCTGAGAAACTA+TGG | 0.286675 | 4.1:+26259396 | None:intergenic |
AGAAGTTCTAACGGCGTCTT+TGG | 0.315218 | 4.1:+26259706 | None:intergenic |
TTAGCAGCAGAAGCTATTAT+AGG | 0.373178 | 4.1:+26259479 | None:intergenic |
CTTTGGATCTTATGCACATC+TGG | 0.376653 | 4.1:+26259809 | None:intergenic |
TGTCACCCACATTATGCCTT+TGG | 0.377548 | 4.1:+26259792 | None:intergenic |
TGTTGCGATTTCCACATTAA+GGG | 0.422533 | 4.1:-26259174 | MS.gene006692:CDS |
ACAATGGAGGTCAGGTTAAG+AGG | 0.430331 | 4.1:+26259026 | None:intergenic |
CTAGAGGTAGCACTCTCAAT+AGG | 0.433502 | 4.1:+26258803 | None:intergenic |
TACACAATGCCAACTCTTGT+AGG | 0.436890 | 4.1:+26259228 | None:intergenic |
CTCCATTGTTGTTGCATGTG+TGG | 0.461254 | 4.1:-26259012 | MS.gene006692:CDS |
AATTGCCTCTTTGATATTGT+GGG | 0.464505 | 4.1:-26259584 | MS.gene006692:CDS |
AAAGATCTTCAGCTTTCTCT+AGG | 0.469504 | 4.1:-26259446 | MS.gene006692:CDS |
GGAAACTCTTGAGGTATGTA+TGG | 0.483097 | 4.1:-26258877 | MS.gene006692:CDS |
GAATTGCCTCTTTGATATTG+TGG | 0.495488 | 4.1:-26259585 | MS.gene006692:CDS |
AGAAAGAATATAATGAAGAA+TGG | 0.504163 | 4.1:+26259739 | None:intergenic |
ACTAGCAATGTCTTCACACT+AGG | 0.511429 | 4.1:+26259311 | None:intergenic |
AATGCCAACTCTTGTAGGAC+AGG | 0.519062 | 4.1:+26259233 | None:intergenic |
ATATAATGAAGAATGGCATC+GGG | 0.519888 | 4.1:+26259746 | None:intergenic |
AACTGACTTCTCATTTGCAA+AGG | 0.521307 | 4.1:+26259277 | None:intergenic |
CAATGGAGGTCAGGTTAAGA+GGG | 0.521610 | 4.1:+26259027 | None:intergenic |
CTTGAAATCTGAGAAACTAT+GGG | 0.524464 | 4.1:+26259397 | None:intergenic |
AATATAATGAAGAATGGCAT+CGG | 0.525790 | 4.1:+26259745 | None:intergenic |
ATGCAACAACAATGGAGGTC+AGG | 0.531268 | 4.1:+26259018 | None:intergenic |
CGTGCAATTAAGTTATTGAG+TGG | 0.564973 | 4.1:-26258933 | MS.gene006692:CDS |
TAAGATCCAAAGGCATAATG+TGG | 0.572424 | 4.1:-26259798 | MS.gene006692:CDS |
CTAGGGAAACGAATACGACT+AGG | 0.579790 | 4.1:+26259329 | None:intergenic |
GTGCCCTGTCCTACAAGAGT+TGG | 0.580632 | 4.1:-26259237 | MS.gene006692:CDS |
CTTCTATATTATCATCAAAG+TGG | 0.581389 | 4.1:-26259688 | MS.gene006692:CDS |
CAAATCTCTCAAAATATCGA+AGG | 0.592683 | 4.1:-26258898 | MS.gene006692:CDS |
ATGAACTTCAAAATCAAAGA+CGG | 0.596207 | 4.1:+26259643 | None:intergenic |
ATCCACACATGCAACAACAA+TGG | 0.604459 | 4.1:+26259010 | None:intergenic |
CTAGCAATGTCTTCACACTA+GGG | 0.604984 | 4.1:+26259312 | None:intergenic |
AATGATCAAGACCCTTAATG+TGG | 0.609271 | 4.1:+26259163 | None:intergenic |
ATCGTCCCACAATATCAAAG+AGG | 0.616712 | 4.1:+26259579 | None:intergenic |
CATCAAAGTGGAGGTACCTG+TGG | 0.618068 | 4.1:-26259676 | MS.gene006692:CDS |
AATATCGAAGGAAACTCTTG+AGG | 0.622107 | 4.1:-26258886 | MS.gene006692:CDS |
CAGATGTGCATAAGATCCAA+AGG | 0.627449 | 4.1:-26259808 | MS.gene006692:CDS |
TGATAATATAGAAGTTCTAA+CGG | 0.635169 | 4.1:+26259697 | None:intergenic |
AGACGGATAATTGAGTCCAC+AGG | 0.649084 | 4.1:+26259660 | None:intergenic |
AGACTCTGCGTTAAAATACG+TGG | 0.651671 | 4.1:-26259530 | MS.gene006692:CDS |
AAGATCCAAAGGCATAATGT+GGG | 0.661125 | 4.1:-26259797 | MS.gene006692:CDS |
CACACATGCAACAACAATGG+AGG | 0.664413 | 4.1:+26259013 | None:intergenic |
CTATATTATCATCAAAGTGG+AGG | 0.668393 | 4.1:-26259685 | MS.gene006692:CDS |
TTGAAATCTGAGAAACTATG+GGG | 0.690741 | 4.1:+26259398 | None:intergenic |
ATGCCAACTCTTGTAGGACA+GGG | 0.696929 | 4.1:+26259234 | None:intergenic |
TAATTGCACGATGAGCAGCA+CGG | 0.762315 | 4.1:+26258946 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAAGAATATAATGAAGAA+TGG | + | chr4.1:26258900-26258919 | None:intergenic | 20.0% |
!!! | TGATAATATAGAAGTTCTAA+CGG | + | chr4.1:26258942-26258961 | None:intergenic | 20.0% |
! | AATATAATGAAGAATGGCAT+CGG | + | chr4.1:26258894-26258913 | None:intergenic | 25.0% |
! | AGAGGGATAAATTCTATTAT+TGG | + | chr4.1:26259595-26259614 | None:intergenic | 25.0% |
! | ATGAACTTCAAAATCAAAGA+CGG | + | chr4.1:26258996-26259015 | None:intergenic | 25.0% |
! | CTTCTATATTATCATCAAAG+TGG | - | chr4.1:26258948-26258967 | MS.gene006692:CDS | 25.0% |
!!! | CTGTCATTTTAAGAACATAA+AGG | - | chr4.1:26259432-26259451 | MS.gene006692:CDS | 25.0% |
!!! | CTTTGATTTTGAAGTTCATA+AGG | - | chr4.1:26258997-26259016 | MS.gene006692:CDS | 25.0% |
AATTGCCTCTTTGATATTGT+GGG | - | chr4.1:26259052-26259071 | MS.gene006692:CDS | 30.0% | |
ACTTGAAATCTGAGAAACTA+TGG | + | chr4.1:26259243-26259262 | None:intergenic | 30.0% | |
ATATAATGAAGAATGGCATC+GGG | + | chr4.1:26258893-26258912 | None:intergenic | 30.0% | |
CAAATCTCTCAAAATATCGA+AGG | - | chr4.1:26259738-26259757 | MS.gene006692:CDS | 30.0% | |
CTATATTATCATCAAAGTGG+AGG | - | chr4.1:26258951-26258970 | MS.gene006692:CDS | 30.0% | |
CTTGAAATCTGAGAAACTAT+GGG | + | chr4.1:26259242-26259261 | None:intergenic | 30.0% | |
TTGAAATCTGAGAAACTATG+GGG | + | chr4.1:26259241-26259260 | None:intergenic | 30.0% | |
! | TTTTCTTTCCAATATCGTCA+AGG | - | chr4.1:26259804-26259823 | MS.gene006692:CDS | 30.0% |
AAAGATCTTCAGCTTTCTCT+AGG | - | chr4.1:26259190-26259209 | MS.gene006692:CDS | 35.0% | |
AATATCGAAGGAAACTCTTG+AGG | - | chr4.1:26259750-26259769 | MS.gene006692:CDS | 35.0% | |
AATGATCAAGACCCTTAATG+TGG | + | chr4.1:26259476-26259495 | None:intergenic | 35.0% | |
ATGTTGCGATTTCCACATTA+AGG | - | chr4.1:26259461-26259480 | MS.gene006692:CDS | 35.0% | |
CGTGCAATTAAGTTATTGAG+TGG | - | chr4.1:26259703-26259722 | MS.gene006692:CDS | 35.0% | |
GAATTGCCTCTTTGATATTG+TGG | - | chr4.1:26259051-26259070 | MS.gene006692:CDS | 35.0% | |
TGTTGCGATTTCCACATTAA+GGG | - | chr4.1:26259462-26259481 | MS.gene006692:CDS | 35.0% | |
TTAGCAGCAGAAGCTATTAT+AGG | + | chr4.1:26259160-26259179 | None:intergenic | 35.0% | |
! | AACTGACTTCTCATTTGCAA+AGG | + | chr4.1:26259362-26259381 | None:intergenic | 35.0% |
! | AAGATCCAAAGGCATAATGT+GGG | - | chr4.1:26258839-26258858 | MS.gene006692:CDS | 35.0% |
! | TAAGATCCAAAGGCATAATG+TGG | - | chr4.1:26258838-26258857 | MS.gene006692:CDS | 35.0% |
ACTAGCAATGTCTTCACACT+AGG | + | chr4.1:26259328-26259347 | None:intergenic | 40.0% | |
AGACTCTGCGTTAAAATACG+TGG | - | chr4.1:26259106-26259125 | MS.gene006692:CDS | 40.0% | |
ATCCACACATGCAACAACAA+TGG | + | chr4.1:26259629-26259648 | None:intergenic | 40.0% | |
ATCGTCCCACAATATCAAAG+AGG | + | chr4.1:26259060-26259079 | None:intergenic | 40.0% | |
CAGATGTGCATAAGATCCAA+AGG | - | chr4.1:26258828-26258847 | MS.gene006692:CDS | 40.0% | |
CTAGCAATGTCTTCACACTA+GGG | + | chr4.1:26259327-26259346 | None:intergenic | 40.0% | |
CTTTGGATCTTATGCACATC+TGG | + | chr4.1:26258830-26258849 | None:intergenic | 40.0% | |
GGAAACTCTTGAGGTATGTA+TGG | - | chr4.1:26259759-26259778 | MS.gene006692:CDS | 40.0% | |
GGCATTATCCTTGACGATAT+TGG | + | chr4.1:26259815-26259834 | None:intergenic | 40.0% | |
TACACAATGCCAACTCTTGT+AGG | + | chr4.1:26259411-26259430 | None:intergenic | 40.0% | |
! | CAGTTCAACGTCTTTTCTCT+GGG | - | chr4.1:26259377-26259396 | MS.gene006692:CDS | 40.0% |
! | TCAGTTCAACGTCTTTTCTC+TGG | - | chr4.1:26259376-26259395 | MS.gene006692:CDS | 40.0% |
!! | TGGATTGCTTTTGCAGCTTA+AGG | + | chr4.1:26259575-26259594 | None:intergenic | 40.0% |
!!! | TCGCTGACTTCTGATCTTTT+TGG | + | chr4.1:26259033-26259052 | None:intergenic | 40.0% |
AATGCCAACTCTTGTAGGAC+AGG | + | chr4.1:26259406-26259425 | None:intergenic | 45.0% | |
ACAATGGAGGTCAGGTTAAG+AGG | + | chr4.1:26259613-26259632 | None:intergenic | 45.0% | |
AGACGGATAATTGAGTCCAC+AGG | + | chr4.1:26258979-26258998 | None:intergenic | 45.0% | |
ATGCAACAACAATGGAGGTC+AGG | + | chr4.1:26259621-26259640 | None:intergenic | 45.0% | |
ATGCCAACTCTTGTAGGACA+GGG | + | chr4.1:26259405-26259424 | None:intergenic | 45.0% | |
CAATGGAGGTCAGGTTAAGA+GGG | + | chr4.1:26259612-26259631 | None:intergenic | 45.0% | |
CACACATGCAACAACAATGG+AGG | + | chr4.1:26259626-26259645 | None:intergenic | 45.0% | |
CTAGGGAAACGAATACGACT+AGG | + | chr4.1:26259310-26259329 | None:intergenic | 45.0% | |
TAATTGCACGATGAGCAGCA+CGG | + | chr4.1:26259693-26259712 | None:intergenic | 45.0% | |
TGTCACCCACATTATGCCTT+TGG | + | chr4.1:26258847-26258866 | None:intergenic | 45.0% | |
! | AGAAGTTCTAACGGCGTCTT+TGG | + | chr4.1:26258933-26258952 | None:intergenic | 45.0% |
! | CTCCATTGTTGTTGCATGTG+TGG | - | chr4.1:26259624-26259643 | MS.gene006692:CDS | 45.0% |
!! | CATCAAAGTGGAGGTACCTG+TGG | - | chr4.1:26258960-26258979 | MS.gene006692:CDS | 50.0% |
GTGCCCTGTCCTACAAGAGT+TGG | - | chr4.1:26259399-26259418 | MS.gene006692:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 26258818 | 26259840 | 26258818 | ID=MS.gene006692 |
chr4.1 | mRNA | 26258818 | 26259840 | 26258818 | ID=MS.gene006692.t1;Parent=MS.gene006692 |
chr4.1 | exon | 26258818 | 26259840 | 26258818 | ID=MS.gene006692.t1.exon1;Parent=MS.gene006692.t1 |
chr4.1 | CDS | 26258818 | 26259840 | 26258818 | ID=cds.MS.gene006692.t1;Parent=MS.gene006692.t1 |
Gene Sequence |
Protein sequence |