AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene006727


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006727.t1 MTR_4g080787 72.040 397 104 3 141 531 96 491 0.0 539
MS.gene006727.t1 MTR_4g080787 49.805 257 122 2 721 977 214 463 2.94e-56 203
MS.gene006727.t1 MTR_3g048290 67.959 387 113 3 141 516 90 476 8.98e-169 502
MS.gene006727.t1 MTR_3g048290 47.266 256 119 5 730 977 217 464 1.75e-42 162
MS.gene006727.t1 MTR_4g080773 66.584 401 126 3 141 533 96 496 6.70e-153 461
MS.gene006727.t1 MTR_4g080773 48.594 249 122 3 730 977 223 466 1.38e-52 192
MS.gene006727.t1 MTR_4g080773 66.667 399 125 3 141 531 96 494 7.35e-153 462
MS.gene006727.t1 MTR_4g080773 48.594 249 122 3 730 977 223 466 1.04e-52 193
MS.gene006727.t1 MTR_4g080807 58.146 356 108 3 147 495 1 322 2.54e-122 379
MS.gene006727.t1 MTR_4g080807 46.694 242 121 3 730 969 88 323 2.10e-45 169
MS.gene006727.t1 MTR_5g039950 46.995 366 167 6 145 504 75 419 4.84e-84 278
MS.gene006727.t1 MTR_5g039950 42.995 207 115 2 761 967 206 409 1.79e-34 137
MS.gene006727.t1 MTR_4g080590 46.335 382 193 5 135 508 78 455 1.63e-82 275
MS.gene006727.t1 MTR_4g080590 44.856 243 126 4 734 975 214 449 2.30e-44 167
MS.gene006727.t1 MTR_4g130200 44.475 362 172 4 146 504 56 391 4.99e-76 255
MS.gene006727.t1 MTR_4g130200 48.544 206 100 3 773 977 191 391 1.41e-42 160
MS.gene006727.t1 MTR_7g023310 44.697 396 195 8 127 504 67 456 1.14e-72 248
MS.gene006727.t1 MTR_7g023310 43.083 253 131 5 730 978 214 457 1.04e-33 136
MS.gene006727.t1 MTR_7g039630 46.372 317 157 5 115 418 27 343 1.05e-71 241
MS.gene006727.t1 MTR_7g039630 43.293 164 86 4 730 890 183 342 1.76e-25 109
MS.gene006727.t1 MTR_4g080590 47.260 292 142 5 135 418 78 365 3.24e-58 205
MS.gene006727.t1 MTR_4g080590 43.791 153 78 4 733 884 213 358 7.10e-20 93.2
MS.gene006727.t1 MTR_7g023330 45.353 269 129 7 248 504 133 395 1.51e-53 192
MS.gene006727.t1 MTR_7g023330 41.137 299 160 7 684 977 108 395 2.16e-44 166
MS.gene006727.t1 MTR_4g081030 37.701 374 165 9 142 504 71 387 5.82e-53 190
MS.gene006727.t1 MTR_4g081030 40.506 158 89 2 730 884 198 353 1.83e-15 80.1
MS.gene006727.t1 MTR_2g094750 44.481 308 133 11 142 414 156 460 1.52e-50 186
MS.gene006727.t1 MTR_2g094750 45.238 168 71 6 731 887 303 460 1.85e-24 108
MS.gene006727.t1 MTR_5g039970 49.372 239 111 3 141 369 84 322 3.54e-48 175
MS.gene006727.t1 MTR_5g039970 46.903 113 57 3 730 840 211 322 1.41e-14 76.6
MS.gene006727.t1 MTR_2g094450 38.587 184 88 6 252 425 31 199 1.89e-23 99.8
MS.gene006727.t1 MTR_2g094450 40.698 172 80 6 731 899 48 200 4.41e-21 92.8
MS.gene006727.t1 MTR_2g072530 26.596 376 247 12 146 504 82 445 1.18e-18 90.5
MS.gene006727.t1 MTR_2g072530 32.121 165 99 6 798 958 272 427 3.69e-11 67.0
MS.gene006727.t1 MTR_1g082260 33.721 172 108 2 111 279 7 175 4.61e-18 83.6
MS.gene006727.t1 MTR_6g076210 63.750 80 21 3 611 686 41 116 1.66e-17 83.6
MS.gene006727.t1 MTR_4g032730 27.414 321 182 11 187 473 134 437 4.40e-14 76.3
MS.gene006727.t1 MTR_4g461050 61.404 57 21 1 8 64 309 364 1.53e-13 74.3
MS.gene006727.t1 MTR_8g467800 27.211 294 174 10 215 484 159 436 3.34e-13 73.6
MS.gene006727.t1 MTR_5g084070 27.760 317 195 9 170 473 100 395 8.52e-13 72.0
MS.gene006727.t1 MTR_3g052072 30.508 118 72 3 16 130 37 147 2.31e-12 67.8
MS.gene006727.t1 MTR_5g080710 24.839 310 216 8 170 473 123 421 9.21e-12 68.9
MS.gene006727.t1 MTR_4g048330 35.714 126 59 3 22 137 190 303 7.19e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006727.t1 AT5G53840 27.879 330 228 8 147 472 83 406 4.81e-20 94.7
MS.gene006727.t1 AT4G22280 27.692 325 202 10 163 475 82 385 1.74e-18 89.7
MS.gene006727.t1 AT4G22280 29.008 262 162 7 163 413 82 330 6.93e-18 86.7
MS.gene006727.t1 AT1G66290 29.897 291 179 9 206 480 151 432 7.27e-18 88.2
MS.gene006727.t1 AT1G56610 28.205 273 172 6 165 416 55 324 4.40e-17 85.5
MS.gene006727.t1 AT4G14096 25.191 393 262 13 137 506 68 451 6.18e-17 85.5
MS.gene006727.t1 AT4G14096 25.191 393 262 13 137 506 68 451 6.18e-17 85.5
MS.gene006727.t1 AT3G59210 26.131 398 255 14 141 506 73 463 6.67e-17 85.5
MS.gene006727.t1 AT3G59210 26.131 398 255 14 141 506 73 463 6.67e-17 85.5
MS.gene006727.t1 AT3G59210 26.131 398 255 14 141 506 73 463 6.67e-17 85.5
MS.gene006727.t1 AT3G59210 26.131 398 255 14 141 506 73 463 6.67e-17 85.5
MS.gene006727.t1 AT3G59210 26.131 398 255 14 141 506 73 463 6.67e-17 85.5
MS.gene006727.t1 AT1G56610 28.205 273 172 6 165 416 94 363 7.09e-17 85.1
MS.gene006727.t1 AT1G56610 28.205 273 172 6 165 416 157 426 2.50e-16 84.0
MS.gene006727.t1 AT3G59180 27.595 395 226 15 163 506 63 448 4.57e-16 82.8
MS.gene006727.t1 AT1G58310 27.374 358 215 11 198 515 146 498 1.09e-15 81.6
MS.gene006727.t1 AT1G66300 28.481 316 197 10 174 473 126 428 3.20e-15 80.1
MS.gene006727.t1 AT3G58860 24.507 355 245 10 164 504 99 444 7.57e-15 78.6
MS.gene006727.t1 AT4G14103 27.574 272 174 9 162 417 94 358 1.04e-14 77.8
MS.gene006727.t1 AT4G14103 27.574 272 174 9 162 417 94 358 1.04e-14 77.8
MS.gene006727.t1 AT4G14103 24.518 363 226 12 162 506 94 426 2.24e-14 77.0
MS.gene006727.t1 AT1G06630 29.839 248 162 7 170 413 112 351 4.97e-14 75.5
MS.gene006727.t1 AT1G06630 29.839 248 162 7 170 413 112 351 4.97e-14 75.5
MS.gene006727.t1 AT1G06630 28.896 308 192 11 170 470 112 399 5.50e-14 75.5
MS.gene006727.t1 AT1G06630 28.896 308 192 11 170 470 112 399 5.50e-14 75.5
MS.gene006727.t1 AT1G06630 28.896 308 192 11 170 470 112 399 5.50e-14 75.5
MS.gene006727.t1 AT1G06630 28.896 308 192 11 170 470 112 399 5.50e-14 75.5
MS.gene006727.t1 AT3G59240 26.496 351 228 13 164 489 98 443 6.70e-14 75.9
MS.gene006727.t1 AT1G06630 29.617 287 176 10 170 450 112 378 6.88e-14 75.9
MS.gene006727.t1 AT5G44950 27.744 328 201 13 168 472 91 405 6.97e-14 75.5
MS.gene006727.t1 AT1G06630 29.603 277 171 9 170 442 121 377 9.08e-14 75.1
MS.gene006727.t1 AT1G78750 29.063 320 201 11 170 472 116 426 2.26e-13 73.9
MS.gene006727.t1 AT1G78750 29.063 320 201 11 170 472 116 426 2.26e-13 73.9
MS.gene006727.t1 AT5G22660 26.706 337 202 13 164 472 95 414 7.03e-13 72.4
MS.gene006727.t1 AT3G59230 25.000 408 255 16 140 506 79 476 1.14e-12 72.0
MS.gene006727.t1 AT3G59250 26.667 360 232 14 162 499 62 411 1.29e-12 71.6
MS.gene006727.t1 AT1G66320 26.950 282 169 10 227 485 175 442 2.42e-12 70.9
MS.gene006727.t1 AT5G22730 27.723 303 178 10 198 473 147 435 1.25e-11 68.6
MS.gene006727.t1 AT5G22730 27.723 303 178 10 198 473 147 435 1.25e-11 68.6
MS.gene006727.t1 AT5G15620 26.513 347 220 14 170 489 86 424 1.35e-11 68.6
MS.gene006727.t1 AT3G60040 26.518 313 200 12 170 472 340 632 1.54e-11 68.9
MS.gene006727.t1 AT3G60040 26.518 313 200 12 170 472 338 630 1.68e-11 68.9
MS.gene006727.t1 AT3G60040 26.518 313 200 12 170 472 341 633 1.91e-11 68.9
MS.gene006727.t1 AT3G60040 26.518 313 200 12 170 472 340 632 2.00e-11 68.6
MS.gene006727.t1 AT3G60040 26.518 313 200 12 170 472 121 413 2.16e-11 68.2
MS.gene006727.t1 AT1G16930 23.889 360 242 10 142 475 73 426 2.27e-11 67.8
MS.gene006727.t1 AT1G16930 23.889 360 242 10 142 475 73 426 2.27e-11 67.8
MS.gene006727.t1 AT1G16930 23.889 360 242 10 142 475 73 426 2.27e-11 67.8

Find 195 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCTTGGTGTTATAATATT+TGG 0.118070 4.1:+25962079 MS.gene006727:CDS
GTTGATTCCAAGAAGTTTAA+AGG 0.140284 4.1:+25957498 MS.gene006727:intron
GTCACCGACATTATCAAAAT+TGG 0.155826 4.1:-25968010 None:intergenic
GTTAAGAAGGATAAATTTAA+TGG 0.216889 4.1:-25962548 None:intergenic
TCAAATTCTTCTTTGGTTCC+TGG 0.228872 4.1:+25966425 MS.gene006727:CDS
ATCTTGATCTCCTCTAAATA+TGG 0.233669 4.1:-25963265 None:intergenic
TTCTTCTTTGGTTCCTGGTT+TGG 0.239802 4.1:+25966430 MS.gene006727:CDS
TGGAATTCTGTGGTTGTTAT+TGG 0.242774 4.1:+25962392 MS.gene006727:CDS
TTGGTGCAGGGTGACATTGC+TGG 0.245996 4.1:+25966296 MS.gene006727:CDS
GACACATCTTCATGTTCTTC+CGG 0.249141 4.1:+25969074 MS.gene006727:CDS
GCATGAGCAGGTGCCTTCTT+TGG 0.262681 4.1:-25966173 None:intergenic
TGGTCCCTCAAATTCTTCTT+TGG 0.262749 4.1:+25966418 MS.gene006727:CDS
AGAAAATTCCCCATATTTAG+AGG 0.279357 4.1:+25963255 MS.gene006727:CDS
CTGGAAGTTCTTACGATTCC+TGG 0.281566 4.1:+25962994 MS.gene006727:CDS
ATGTTGCAATTTCCACATTA+AGG 0.299381 4.1:+25962434 MS.gene006727:CDS
GGTAACACAAAGTTATCTTT+TGG 0.300165 4.1:-25962190 None:intergenic
CTTCTCAACAGAAGATATTA+AGG 0.307374 4.1:-25962131 None:intergenic
ACACATCTTCATGTTCTTCC+GGG 0.310333 4.1:+25969075 MS.gene006727:CDS
GGAAGTTCTTACGGCATCTT+TGG 0.312765 4.1:-25968097 None:intergenic
AATATCTCGAACAAAATATC+TGG 0.329408 4.1:-25969453 None:intergenic
AAAGTAAGGGCTTCTAGTTT+AGG 0.332765 4.1:-25969153 None:intergenic
TGAGACTTTAGATGTATTGA+TGG 0.351813 4.1:+25969113 MS.gene006727:CDS
TGGTGCAGGGTGACATTGCT+GGG 0.351978 4.1:+25966297 MS.gene006727:CDS
TAGTGCTTCATTAGTGTTCT+CGG 0.355640 4.1:-25962944 None:intergenic
GAGACGTTTATCAGCTGATA+TGG 0.362056 4.1:+25963297 MS.gene006727:CDS
GCACAATCAAATCTATCTTC+TGG 0.363560 4.1:-25968837 None:intergenic
ACTTGATGACACAACTTTCC+AGG 0.368020 4.1:-25963360 None:intergenic
TCTCCGAAAGACTCCTAAAC+TGG 0.371203 4.1:+25962975 MS.gene006727:CDS
CTTCCAGTTTAGGAGTCTTT+CGG 0.373671 4.1:-25962978 None:intergenic
GGATGATATCTTGGACCAAT+TGG 0.376333 4.1:+25963327 MS.gene006727:CDS
TCATCTCTTAATCAAAGTTC+AGG 0.377122 4.1:+25957804 MS.gene006727:CDS
AAAATATGCCACAGTATTAG+AGG 0.381044 4.1:+25969426 MS.gene006727:CDS
TGGAAATTGCAACATTAATC+TGG 0.384297 4.1:-25962426 None:intergenic
TGGCAATCTGAGGGCCTTGA+TGG 0.385980 4.1:+25969517 MS.gene006727:CDS
AGTCCCGTTAATAGCTCAAT+TGG 0.387444 4.1:-25962640 None:intergenic
ACAATCAGGGCCAAGATAAA+TGG 0.387574 4.1:-25968664 None:intergenic
TCGTCACCATCTTGACAATC+AGG 0.389446 4.1:-25968678 None:intergenic
CCCTTGCTATCAACACTAGT+TGG 0.393128 4.1:-25957723 None:intergenic
AGAATCAATGTTGTCACAAT+GGG 0.394703 4.1:-25966342 None:intergenic
TCATTGAATGAACTGCGTTT+AGG 0.397210 4.1:+25962235 MS.gene006727:CDS
AAAGTTGTGTCATCAAGTTT+TGG 0.397740 4.1:+25963365 MS.gene006727:CDS
GGCATCTTTGGTAGGGAGTA+AGG 0.400930 4.1:-25968085 None:intergenic
TTAACATAAACTCAACCAAT+TGG 0.400938 4.1:-25969405 None:intergenic
GTGCCCTGTCTTACAAGAAT+TGG 0.402005 4.1:+25962372 MS.gene006727:CDS
GGAATTCTGTGGTTGTTATT+GGG 0.403858 4.1:+25962393 MS.gene006727:CDS
TCTTGATCTCCTCTAAATAT+GGG 0.405909 4.1:-25963264 None:intergenic
AGAATGTTGACCATTTATCT+TGG 0.415131 4.1:+25968654 MS.gene006727:CDS
CCTAGTGGTATTCGTTTCCC+TGG 0.417775 4.1:+25962280 MS.gene006727:CDS
AACTGTGCATGCTTCCAATC+AGG 0.422982 4.1:+25957827 MS.gene006727:CDS
GAACACTAATGAAGCACTAA+TGG 0.425341 4.1:+25962948 MS.gene006727:CDS
TGATTAGGTACTTAACTACT+TGG 0.425971 4.1:+25963114 MS.gene006727:intron
CCTTGCTATCAACACTAGTT+GGG 0.426091 4.1:-25957722 None:intergenic
GCACCTGCTCATGCTGAGGC+TGG 0.426594 4.1:+25966182 MS.gene006727:CDS
GATTGTGCTTATAGTGCAAT+TGG 0.427303 4.1:+25968852 MS.gene006727:CDS
ATCTCCAATTGAGCTATTAA+CGG 0.429819 4.1:+25962636 MS.gene006727:CDS
GGAGAAGCTGGATGATATCT+TGG 0.431073 4.1:+25963318 MS.gene006727:CDS
GCATATAGCAGCTTCAGATC+TGG 0.436441 4.1:+25966379 MS.gene006727:CDS
TAAATAATTTGAGAGAAGAT+TGG 0.436879 4.1:-25969348 None:intergenic
ACTATCAATTTCTTCAAGCC+AGG 0.443829 4.1:-25962298 None:intergenic
CATCAATGGCGCCACGCAAA+TGG 0.444391 4.1:+25956726 None:intergenic
TATTAAGGACTTAACTTTGT+CGG 0.445602 4.1:-25962116 None:intergenic
CCAGGCATACATCTTCCAAT+TGG 0.445740 4.1:-25963342 None:intergenic
TTAGGGATTTGAATATGTAT+TGG 0.447651 4.1:+25969285 MS.gene006727:intron
GTGAGAAGCTTTCGGAGGTT+CGG 0.453542 4.1:+25966240 MS.gene006727:CDS
GTGATTGCTCTTTCCACAAA+AGG 0.455386 4.1:-25957586 None:intergenic
TTGAGAAGCTGTATGATGTA+TGG 0.457871 4.1:+25969488 MS.gene006727:CDS
GATGTACCCTAGGAAAAGTA+AGG 0.458054 4.1:-25969167 None:intergenic
TCCCTCGGGTGCAGCATGAT+TGG 0.460742 4.1:-25957679 None:intergenic
AGTGCTTCATTAGTGTTCTC+GGG 0.462346 4.1:-25962943 None:intergenic
AATTCCAATTCTTGTAAGAC+AGG 0.466930 4.1:-25962376 None:intergenic
TGCAACATTATTATCTCCCT+CGG 0.467631 4.1:-25957694 None:intergenic
TGATGCGATTGTACCGGCTA+TGG 0.467783 4.1:-25967986 None:intergenic
TACTGCTCATGTGTAATAGC+TGG 0.469618 4.1:-25957753 None:intergenic
ATGCATCAACTAGGGAGATC+AGG 0.470059 4.1:-25962570 None:intergenic
TTTCAAGGATCAAATTCTAA+AGG 0.471623 4.1:+25957546 MS.gene006727:CDS
AGAGGATTCATCATCGTAGC+TGG 0.476453 4.1:-25964674 None:intergenic
TCTCCAATTGAGCTATTAAC+GGG 0.476475 4.1:+25962637 MS.gene006727:CDS
ATCAGCTGATATGGAGAAGC+TGG 0.480704 4.1:+25963306 MS.gene006727:CDS
TGTCCATTCTTACCTGCAGC+AGG 0.481543 4.1:-25964862 None:intergenic
ATCGTAAGAACTTCCAGTTT+AGG 0.483920 4.1:-25962988 None:intergenic
TGGAAGTTCTTACGATTCCT+GGG 0.484173 4.1:+25962995 MS.gene006727:CDS
TCAATCTTGATTGTCATATG+AGG 0.485524 4.1:-25962484 None:intergenic
TAAACAGCGTGAGAAGCTTT+CGG 0.487338 4.1:+25966232 MS.gene006727:CDS
TCACCGACATTATCAAAATT+GGG 0.488438 4.1:-25968009 None:intergenic
TTTGGTAAATCATCATTTCA+AGG 0.495905 4.1:+25957531 MS.gene006727:CDS
CTGGAGAACACAGTTGCTGC+TGG 0.501681 4.1:+25966398 MS.gene006727:CDS
AGACATAGAAGTAACCTGAT+TGG 0.502115 4.1:-25957841 None:intergenic
TATAAAATGTAGGAAGGAGA+TGG 0.503290 4.1:-25962888 None:intergenic
GTGCATCAACTATGAAGATC+GGG 0.503605 4.1:-25968785 None:intergenic
TTCTTACGGCATCTTTGGTA+GGG 0.505091 4.1:-25968092 None:intergenic
GTTCTTACGGCATCTTTGGT+AGG 0.505500 4.1:-25968093 None:intergenic
CGTCGAAGATGAAATCCAAT+TGG 0.510242 4.1:+25969390 MS.gene006727:CDS
CAATGTCTTCAACTTTCACT+AGG 0.512505 4.1:+25962163 MS.gene006727:CDS
CTAGGGAGATCAGGTTAAGA+AGG 0.513211 4.1:-25962561 None:intergenic
CCCAACTAGTGTTGATAGCA+AGG 0.514002 4.1:+25957722 MS.gene006727:CDS
TTTAGCATTTCAAATTTCAC+CGG 0.515029 4.1:+25969367 MS.gene006727:CDS
TGTGGAATGAAGGAAGGAGA+TGG 0.515774 4.1:-25969047 None:intergenic
AAGTTTGTCAGTTGTGAGAG+AGG 0.516535 4.1:-25966504 None:intergenic
TACCCAGCCTCAGCATGAGC+AGG 0.517266 4.1:-25966185 None:intergenic
AGGTTAATGACTCTTCTTCA+AGG 0.517920 4.1:+25957780 MS.gene006727:CDS
TCAAATTATAAAATGTAGGA+AGG 0.520029 4.1:-25962894 None:intergenic
TCAGAGAAGCCGAAAAGCCC+CGG 0.520718 4.1:-25969093 None:intergenic
CTTGGCCCTGATTGTCAAGA+TGG 0.522883 4.1:+25968672 MS.gene006727:CDS
AGTGTCTGGCACACCAAAGA+AGG 0.524001 4.1:+25966160 MS.gene006727:intron
CAGGTTACTTCTATGTCTGT+TGG 0.524176 4.1:+25957846 MS.gene006727:CDS
CACCTGCTCATGCTGAGGCT+GGG 0.524585 4.1:+25966183 MS.gene006727:CDS
TTGGATTTCATCTTCGACGC+CGG 0.529338 4.1:-25969386 None:intergenic
TACAGCTTCTCAACATCGAC+AGG 0.529404 4.1:-25969478 None:intergenic
ATGTATTGGATGTTGAAGAC+TGG 0.530710 4.1:+25969299 MS.gene006727:CDS
TAGAATCAATGTTGTCACAA+TGG 0.531951 4.1:-25966343 None:intergenic
TGTGTCAAATTATAAAATGT+AGG 0.532522 4.1:-25962898 None:intergenic
AGTTAATATATGCATCAACT+AGG 0.534518 4.1:-25962579 None:intergenic
AGTTCTTACGATTCCTGGGG+TGG 0.537163 4.1:+25962999 MS.gene006727:CDS
CCAATTGGAAGATGTATGCC+TGG 0.537278 4.1:+25963342 MS.gene006727:CDS
CTAGCGTCTTTACCATGCTA+AGG 0.539247 4.1:+25962858 MS.gene006727:intron
TTGTATTTGGGCAGGCAGGT+AGG 0.540016 4.1:+25967952 MS.gene006727:intron
GCAACATTATTATCTCCCTC+GGG 0.540890 4.1:-25957693 None:intergenic
TTTGGGCAGGCAGGTAGGAA+TGG 0.542879 4.1:+25967957 MS.gene006727:intron
AGTTGTGAGAGAGGTGTGGT+TGG 0.543438 4.1:-25966495 None:intergenic
CTATCAATTTCTTCAAGCCA+GGG 0.544471 4.1:-25962297 None:intergenic
TGTGCATCAACTATGAAGAT+CGG 0.546851 4.1:-25968786 None:intergenic
CTTCTTCCAACATGTTTCAA+CGG 0.547279 4.1:-25957610 None:intergenic
TTTCAGGCTGCGAATTCTGG+GGG 0.548559 4.1:+25964835 MS.gene006727:intron
TGGTTGGTAGTGATAGGTTG+AGG 0.550870 4.1:-25966479 None:intergenic
TCTAATCACGTACAAAGCCT+TGG 0.552416 4.1:+25962064 MS.gene006727:CDS
ATTGGGTGATGCGATTGTAC+CGG 0.554990 4.1:-25967992 None:intergenic
ATTGGAGATTGAGCAGCGTA+TGG 0.556199 4.1:-25962622 None:intergenic
GATGCGATTGTACCGGCTAT+GGG 0.556861 4.1:-25967985 None:intergenic
TGTGTCAAGTTGTGGAATGA+AGG 0.558767 4.1:-25969057 None:intergenic
TGTCAGTTGTGAGAGAGGTG+TGG 0.559238 4.1:-25966499 None:intergenic
GCCAATCATGCTGCACCCGA+GGG 0.559898 4.1:+25957678 MS.gene006727:CDS
TGCCAATCATGCTGCACCCG+AGG 0.559939 4.1:+25957677 MS.gene006727:CDS
GATTCTAAACTTCCTTAATG+TGG 0.559972 4.1:-25962446 None:intergenic
CACATCTTCATGTTCTTCCG+GGG 0.561513 4.1:+25969076 MS.gene006727:CDS
CATGAAGATGTGTCAAGTTG+TGG 0.564835 4.1:-25969065 None:intergenic
TCAAGTCTCTCAAACTAACA+AGG 0.565163 4.1:+25968898 MS.gene006727:CDS
ATCACACCGTTGAAACATGT+TGG 0.568725 4.1:+25957604 MS.gene006727:CDS
AATGTAAAATATACCACCCC+AGG 0.570766 4.1:-25963012 None:intergenic
AGAGAAGATTGGAAACAGCT+AGG 0.572752 4.1:-25969337 None:intergenic
AGGAACCAAAGAAGAATTTG+AGG 0.573234 4.1:-25966423 None:intergenic
TTGAATTGTTTCTGAAGATG+TGG 0.576626 4.1:-25957645 None:intergenic
CGAAGTGTGCTATCCAAACC+AGG 0.578099 4.1:-25966443 None:intergenic
GAGGTGTGGTTGGTAGTGAT+AGG 0.578546 4.1:-25966485 None:intergenic
GTTAATATATGCATCAACTA+GGG 0.578731 4.1:-25962578 None:intergenic
TTGGTCATTCACCATCAGAT+AGG 0.579741 4.1:+25957865 MS.gene006727:CDS
CTCGTCAGATTCATCATCAG+AGG 0.584104 4.1:-25964692 None:intergenic
AATTGTTTCTGAAGATGTGG+TGG 0.584228 4.1:-25957642 None:intergenic
ACTTAATGACACAACCATCA+AGG 0.585658 4.1:-25969531 None:intergenic
TATCTTTGCTAACAAGAACT+CGG 0.587578 4.1:+25962330 MS.gene006727:CDS
CTGGATCTCCTCTAATACTG+TGG 0.590237 4.1:-25969434 None:intergenic
AGAAGCTTTCGGAGGTTCGG+AGG 0.592522 4.1:+25966243 MS.gene006727:CDS
TTCTGAAGCTCAAAGAAGTG+TGG 0.592833 4.1:+25966577 MS.gene006727:CDS
GGAACCAAAGAAGAATTTGA+GGG 0.593067 4.1:-25966422 None:intergenic
ATGTACCCTAGGAAAAGTAA+GGG 0.595904 4.1:-25969166 None:intergenic
GTTGCGTGGCGCCATTTGCG+TGG 0.595908 4.1:-25956737 None:intergenic
TTAGTGTCATGTACAACAGA+AGG 0.596292 4.1:-25966212 None:intergenic
ACTAACAAGGGATACTCTCA+AGG 0.597804 4.1:+25968911 MS.gene006727:CDS
CTGGTTTGGATAGCACACTT+CGG 0.599582 4.1:+25966444 MS.gene006727:CDS
CCAGGGAAACGAATACCACT+AGG 0.602598 4.1:-25962280 None:intergenic
CTTGCTATCAACACTAGTTG+GGG 0.603414 4.1:-25957721 None:intergenic
ATGGAGGCAGTGGCAATCTG+AGG 0.603990 4.1:+25969507 MS.gene006727:CDS
ATTGGATGTTGAAGACTGGA+TGG 0.607112 4.1:+25969303 MS.gene006727:CDS
AGAGAAGATTTGAAACAGCA+CGG 0.609221 4.1:-25963166 None:intergenic
CGTCACCATCTTGACAATCA+GGG 0.609477 4.1:-25968677 None:intergenic
CTCTGATGATGAATCTGACG+AGG 0.609664 4.1:+25964693 MS.gene006727:CDS
GGTGCAGGGTGACATTGCTG+GGG 0.609667 4.1:+25966298 MS.gene006727:CDS
CTTGATCTCCTCTAAATATG+GGG 0.611649 4.1:-25963263 None:intergenic
GAAGGCACCTGCTCATGCTG+AGG 0.612209 4.1:+25966178 MS.gene006727:CDS
GAAACATGTTGGAAGAAGCA+TGG 0.614912 4.1:+25957615 MS.gene006727:CDS
AATGTCACCCTGCACCAAAG+AGG 0.615758 4.1:-25966291 None:intergenic
GGAATGGCTCAACCCATAGC+CGG 0.618770 4.1:+25967973 MS.gene006727:CDS
TTACAAGAATTGGAATTCTG+TGG 0.620052 4.1:+25962382 MS.gene006727:CDS
TCAAGTTGTGGAATGAAGGA+AGG 0.622726 4.1:-25969053 None:intergenic
TTACACATGAGCAGTATGAA+AGG 0.623637 4.1:+25957760 MS.gene006727:CDS
TGGAGGCAGTGGCAATCTGA+GGG 0.624440 4.1:+25969508 MS.gene006727:CDS
GATGGAGAGTATCCTTAGCA+TGG 0.626867 4.1:-25962870 None:intergenic
GTCCATTCTTACCTGCAGCA+GGG 0.630595 4.1:-25964861 None:intergenic
GCAGCGTATGGTTCATCATG+TGG 0.631744 4.1:-25962610 None:intergenic
GTACCAACGTCTTTGTTGCG+TGG 0.631925 4.1:-25956751 None:intergenic
TGTATGATGTATGGAGGCAG+TGG 0.636076 4.1:+25969497 MS.gene006727:CDS
TTCAGGCTGCGAATTCTGGG+GGG 0.637030 4.1:+25964836 MS.gene006727:intron
CAAGTCTCTCAAACTAACAA+GGG 0.638613 4.1:+25968899 MS.gene006727:CDS
CGTGTACCTTGCCTATCTGA+TGG 0.641302 4.1:-25957876 None:intergenic
CTAGTGAAAGTTGAAGACAT+TGG 0.645072 4.1:-25962162 None:intergenic
TCAAAAGCTGAGAAACTATG+TGG 0.645344 4.1:-25962211 None:intergenic
ATTCCAATTCTTGTAAGACA+GGG 0.645662 4.1:-25962375 None:intergenic
CCAACTAGTGTTGATAGCAA+GGG 0.652039 4.1:+25957723 MS.gene006727:CDS
CTCCAAATATTATAACACCA+AGG 0.664984 4.1:-25962081 None:intergenic
GGAAGTTCTTACGATTCCTG+GGG 0.665994 4.1:+25962996 MS.gene006727:CDS
CATTCACCATCAGATAGGCA+AGG 0.666778 4.1:+25957870 MS.gene006727:CDS
GCGCCACGCAACAAAGACGT+TGG 0.685551 4.1:+25956748 MS.gene006727:CDS
ACAGCGTGAGAAGCTTTCGG+AGG 0.685730 4.1:+25966235 MS.gene006727:CDS
TTCACTCTACATATTCCTAG+TGG 0.693154 4.1:+25962265 MS.gene006727:CDS
GAATCAATGTTGTCACAATG+GGG 0.699389 4.1:-25966341 None:intergenic
AGAAGCTGTATGATGTATGG+AGG 0.703132 4.1:+25969491 MS.gene006727:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.1 gene 25956731 25969561 25956731 ID=MS.gene006727
chr4.1 mRNA 25956731 25969561 25956731 ID=MS.gene006727.t1;Parent=MS.gene006727
chr4.1 exon 25956731 25956769 25956731 ID=MS.gene006727.t1.exon1;Parent=MS.gene006727.t1
chr4.1 CDS 25956731 25956769 25956731 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25957510 25957891 25957510 ID=MS.gene006727.t1.exon2;Parent=MS.gene006727.t1
chr4.1 CDS 25957510 25957891 25957510 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25962038 25962705 25962038 ID=MS.gene006727.t1.exon3;Parent=MS.gene006727.t1
chr4.1 CDS 25962038 25962705 25962038 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25962862 25963020 25962862 ID=MS.gene006727.t1.exon4;Parent=MS.gene006727.t1
chr4.1 CDS 25962862 25963020 25962862 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25963121 25963386 25963121 ID=MS.gene006727.t1.exon5;Parent=MS.gene006727.t1
chr4.1 CDS 25963121 25963386 25963121 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25964672 25964720 25964672 ID=MS.gene006727.t1.exon6;Parent=MS.gene006727.t1
chr4.1 CDS 25964672 25964720 25964672 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25964841 25964871 25964841 ID=MS.gene006727.t1.exon7;Parent=MS.gene006727.t1
chr4.1 CDS 25964841 25964871 25964841 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25966162 25966612 25966162 ID=MS.gene006727.t1.exon8;Parent=MS.gene006727.t1
chr4.1 CDS 25966162 25966612 25966162 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25967966 25968107 25967966 ID=MS.gene006727.t1.exon9;Parent=MS.gene006727.t1
chr4.1 CDS 25967966 25968107 25967966 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25968618 25968932 25968618 ID=MS.gene006727.t1.exon10;Parent=MS.gene006727.t1
chr4.1 CDS 25968618 25968932 25968618 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25969021 25969182 25969021 ID=MS.gene006727.t1.exon11;Parent=MS.gene006727.t1
chr4.1 CDS 25969021 25969182 25969021 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
chr4.1 exon 25969289 25969561 25969289 ID=MS.gene006727.t1.exon12;Parent=MS.gene006727.t1
chr4.1 CDS 25969289 25969561 25969289 ID=cds.MS.gene006727.t1;Parent=MS.gene006727.t1
Gene Sequence

>MS.gene006727

ATGGCGCCACGCAAATGGCGCCACGCAACAAAGACGTTGGTACTTCTTCTACTTTCGAGGAGGATCCCACAAATCATTCAAGTCCTTATTTTGTTCATCCAAGCGATGGTCCTTCTTCAGTTTCTGTTTCTCCGGTTCTTGACGGATCAAATTATCATTCTTGGGCTCGTTCAATGCGAAGAGCTTTGGGCGGGAAAATGAAGTTTGAATTCGTTGATGGATCAATCTCTCCAATTCTTGATGAATTCGATCCTCTTTTTCGCGCTTGGAATCGCTGTAACATGCTCGTTCATTCTTGGATTGTGAATTCGGTTTCTCCTTCAATTGCTCAATCCATTGTGTTTATGGAAAATGCATGTGATATTTGGGTGGATTTGAAGGAACGATTTGCACAAGGTGACTTGGTAAGGATCTCTGAACTAATGCAAGAAATTTACTCCTTACAACAAGATTCCAAAACAGTTACCACTTTCTACTCTGAATTGAAGATTCTTTGGGAAGAATTGGAGATTTACATGCCTATACCAAACTGCACTTGTAGAGTACGTTGTTCTTGTGAATTCATGAGAAATGCACGACGTAATCATACTTTACTCTACGCTATTCGTTTCCTTACTGGTTTGAATGAAAGCTTTAGTATGGTGAAATCTCAAATTCTGTTAATGGATCCTCTTCCCTCTATGAACAAGATTTTCTCCATGGTTTTACAATATGAAAGACAATATAATCCTTCTCCTACTGTTGATGACTCTGTTTTAATCAACTCTGTTGATTCCAAGAAGTTTAAAGGCAACAACTTTTTTGGTAAATCATCATTTCAAGGATCAAATTCTAAAGGTACTTCTCGTGTTTGCACCTTTTGTGGAAAGAGCAATCACACCGTTGAAACATGTTGGAAGAAGCATGGAGTTCCACCACATCTTCAGAAACAATTCAATTCTGCTTATGCCAATCATGCTGCACCCGAGGGAGATAATAATGTTGCAGAATCCCCAACTAGTGTTGATAGCAAGGGTAGTGCTCCAGCTATTACACATGAGCAGTATGAAAGGTTAATGACTCTTCTTCAAGGTTCATCTCTTAATCAAAGTTCAGGAACTGTGCATGCTTCCAATCAGGTTACTTCTATGTCTGTTGGTCATTCACCATCAGATAGGCAAGGTACACGTTTCATTAATTCTTTGGCAAATTATAATTTCACTCAAAACTCCTGGATCATAGATTCAGGAGCTTCTCATCATATTTGTTGCAATCTGAAGTGGTTTCATTCTTACAATGAAATTGCTCCCATGTCCATAAAGTTACCTACAGGTCATATTAGTATGGCAATATATTCAGGAACTGTTAAATTTTCTTCCATTCTTATTCTTTATGATGTTCTTTATGTCCCTGATTTTAATTACAATTTGCTTTCTGTGTCCAAAATGAATAGTTCCCTGAATACTATTGTCAGTTTTAATGGTTTTCAATGTTTGATTCAGGACAAGAAAACCATGAGGATGATTGGTTCTGGTGATAAGAGAGAAGACCTGTACTACTTGAATCTGGATAATAAGTTGGCTTGTTCTGCAAGCAAGACCATTCACTCAACCATCCCTTTACCTGACAGTGCCCTTTGGCATTTCAGACTTGGCCATCTTTCATTTTCTAGAATGAATTTGTTGCAATCTAGTTTCCCTTTTGTTCATGTTGATTCTAAGGCAACATGTGATGTATGCCATTTTTCTAAGCATAGAAAACTCCCTTTCCCTATCAGTTGTAATAAAGCTTCAAAACCGTTTGATCTAATACATTTTGATATTTGGGGCCCCATTTCTGTTCCTTCTGTTCATAATCATGTTTATTTCCTCACTGCAGTTGATGATTATAGTAGATATACTTGGTTAACCCTAATGAAAACAAAAAGTGAAACCAGACAACATGTCATTGCTTTTATAACCCTCATTGAAAATCATTTCAACTGTAATGTGAAAACTGTCAGAAGTGATAATGGTCCTGAATTTAACATCCCTTCATTTTATGCATCCAAAGGAATTTTACACCAAACTAGTTGTGTTGAAACACCTCAGCAAAATGCAAGAGTTGAGAGAAAACATCAGCACATTTTAAACATTACTAGAGCATTACTTTTTCAATCTCATTTACCTAAACAATTTTGGTCCTATGCTGCAGTTCATGCAGTTTTTATCATGAATAGTGTGCCTAGCCCCATTTTACAAAATCAATCACCCTATTTTCTATTGCATAACATGCAACCTGATTTACATCAACTTAAAGTTTTTGGCTCCTTAGCCTATGCCTCTACTTTACAAGCTCAAAGAAGCAAACTTGATTCTAGAGCAAGAAAGTGCATCTTTCTTGGCTACAAAAGTGGCATGAAAGGTGTTGTGCTTTTAGACATACACTCAAAACAAATATTTGTTTCTAGAAATGTCACACATCATGAAACTATTCTTCCTTATCAGTCCAATCCTTCACATATTCCTTGGACCTATCATACCAACATACAACCTGTTACTGACATTTCTTTTTCCCCTAGTGCTGAACCTGTTTCTGATACTTCACCTTTATCCATTGAATTCTCTCTTCCCACTACCAATGACACATCCACATCAACATCCCCATCCACCACTTCCACTATTCATTCACCCAAACCCACAAGACTTAGGTCTCAACCAGCTTATTTGAAAGATTTTGTATGCAGCTCATCTGCTCAATCACCATCATCAGTCAACTCAGGTATACCATATCCACTCTCCTCTTTTCATTCTTTTTCTCATTTATCATCTTCACATAAAGCTTTTTCTACTTCTGTCACACAAAGTACTGAGCCTAAAACCTATAAAGAAGCATGTCAGTCTGATCATTGGTTAAAAGCAATGAATGTTGAATTGGAGGCATTAGCCAATAATGGCACCTGGTGCATTGTTGATACACCACCAAATGTGAAACCTATTGGTTGTAAATGGGTGTATAGAATCAAGTACCAAGCTGACGGTTCTATTGAAAGATACAAAGCAAGATTGGTGGCTAAAGGATATAATCAAATAGAGGGTCTTGATTATTTTGATACATTTTCACCAGTAGCCAAATTAACCACTGTGAGGACCCTTCTTGCTATTGCATCTATTCAAAATTGGCATTTGCACCAGCTAGATGTGAACAATGCTTTTCTTCACGGGGAGCTACAAGAAACTGTTTACATGACAATTCCAGAAGGTGTCTCATGTTCATCTGGCAAAGTCTGTAAATTGAAGAAAAGCCTCTATGGTTTGAAGCAAGCTAGTAGAAAATGGTATGAGAAACTGACTACATTGCTTTTAGCTGAAGGATACAATCAATCCACTGCTGACTACTCTTTGTTTACCCTTCAACATGGTAGTGATTTCACAGCACTTCTAGTGTATGTGGATGACATTATACTAGCTGGCACTTCACTTGATGAGTTTCAGAGAATCAAGAATATTCTTGATAATCAATTCAAAATCAAGGATTTAGGGATTCTTAAATACTTTTTGGGATTTAGGGATTCTTAAATACTTTTTGGGATTAGAGGTAGCTCATTCCAAGGAAGGAATCTCTATTTCACAGAGAAAATACTGTCTTGATTTGCTTGATTCATCAGGTCTTTTAGGTGCCAAACCTGCTCCTACACCTTTAGACACTTCAGTCAAATTGCATCAAGACACAAGCAAACCTTTTACAGATGTGTCTTGCTACAGGAGGCTTATTGGAAGACTGTTGTATTTAAACACTACAAGACCTGATATTTCATTGGCCACTCAACAACTGAGTCAGTTTCTCAATGCTCCTACCACTACTCATTATAAAGCTGCGTGTAGAATTCTAAGATACCTCAAAAATGCTCCTGGCCTTGGTCTTCTGTTTCCAAGAAAGTCAGAAGTACAAATATTGGGGTATGTTGATGCAGATTGGGCAGGTTGTGTGGACACTAGAAGGTCAACTACTGGCTTCTGTTTCTTTTTGGGTTTTTCACTCATATCTTGGAAGGCAAAGAAACAGCCAACTATCTCCAGGTCCTCTTCAGAAGCTGAATATAGGGCTCTATCAGTGGCAACTTGTGAGCTTCAATGGATACTGTACTTGTTGAAGGATCTCAACATTAAATGTGTTAAGCAGCCAGTTCTTTATTGTGATAGTCAAAGTGCTATTCACATAGCATCAAATCTAGTCTTTCATGAGAGAACAAAACATCTTGAAATTGACTGTCATCTAGTTAGAGAAAAATTACATAAGGGTGTTCTTAAGCTCCTACCCATTTCAACTAACGAGCAGCTGGCAGATTTCTTAACAAAAGCACTTCCACCTCCAAAGTTTAATTCTTTCATATGCAAGCTGGGAATGATCAACATATATCATGCTCCAGCTTGTGGGAGGCTGTTGAAAGAAGATATGAAAAAGATAGAAATGCATCTGTTAAATGAAGAAGAAGCAGAAACAAGCTAGAGTTGAATAAACTGCTGTTCAGAAGCTGTACTTCAGAAGCACATGTTCAGAAGCTGTACTTCAGAAGCAGTACTTCAGAAGCACATGATCAGAAGCTGCTGTTCAATAACTTGCAGCTCAAGTTACCAGCCTTGTTAGCTCAAGTCACTAGCTTATATGGCTAACTTGTAGCCCAAGTTTCTTGTAACTAACTTGCTTAGCTGTCAATTAGTTAGTTATAATCCTGTGCGAGATGGTTCATAGTAGCTTATAGTATAGCTTCATTTTATAAACCTATATAAGGCTGTTGTATCAGTGATTCAAAGCTAATGAGAATTATTCTTCATTCTTCATATTTTTCTCTTTTTCTTCTCTGAATTTCATCTTCTCAATAGGTTTTAGATCAACGTAACTAGTAGTGTACTAGTGTTGGTTTAGGGTGATTGTCTTCAGCACACACTTTGTAATGTTTTATTATTGTATATGCCCTTTGCTTTGTTAATTAGGCTCCTAAATTACACATCACTCGTGTTTTATACTAACTAATTTACATTTTTATTTTTTTTCTTAATTTATTGTTTTCAAGTAGGCAAGCATAGCTCATGGCTGGTACAATCTCAACAGCAGACGTGCATAAGATCCAACGACATAATGTGGATGATATTATTAGCGACTTACCTGAGGGCGTCCTTCTTCATATTCTTTCGTTACTCCCTACCAAAGATGCTGTAAGAACTTCCATATTAGCCAAGAAGTGGAGGCACTTGTGGACCCACTTATCTGTCTTTCATTTTGAAACTTTTCTTCGTCAGTATCAGTCAAGCCTACAAAATAGGAAGAATGTGGCCAATTGTCTCTTAGATCTAGTTCAAAGATTACTGCACAAATCTAATCACGTACAAAGCCTTGGTGTTATAATATTTGGAGTTGCTGTTGATGCCGACAAAGTTAAGTCCTTAATATCTTCTGTTGAGAAGCACAAAATCCAATGTCTTCAACTTTCACTAGGCGATCCAAAAGATAACTTTGTGTTACCACATAGTTTCTCAGCTTTTGAGTCATTGAATGAACTGCGTTTAGGACTCAAGTTCACTCTACATATTCCTAGTGGTATTCGTTTCCCTGGCTTGAAGAAATTGATAGTTTCAGATGTTATCTTTGCTAACAAGAACTCGGTTAATCAACTTTTCTCTGGGTGCCCTGTCTTACAAGAATTGGAATTCTGTGGTTGTTATTGGGAGAATATAGACCAGATTAATGTTGCAATTTCCACATTAAGGAAGTTTAGAATCAGTGTAGATTTTGATCCTCATATGACAATCAAGATTGATGCTGTGAATCTTTTATCTTTAAGTTGCACATGCAGTTTAACCATTAAATTTATCCTTCTTAACCTGATCTCCCTAGTTGATGCATATATTAACTTTGACTATCCACATGATGAACCATACGCTGCTCAATCTCCAATTGAGCTATTAACGGGACTTAGTAGTGTCAAGTCTCTCAAACTATATAATAATACTTTTGAGGTATGTTTGACTGTTTTCTCATCATCTTCATTTTTTTTTAAATATTGTATGCACTAATGCCTAATGAGAATGCTGTCTTTCGTTATGTGTTTCTTATAATTGTTGCATATTTTCTTTGTATCGCAATACTGAATGTAATTTTGTTTCCATTACTAGCGTCTTTACCATGCTAAGGATACTCTCCATCTCCTTCCTACATTTTATAATTTGACACATCTTTATGTGTTTTCTCTGAGTCCCGAGAACACTAATGAAGCACTAATGGACATTCTCCGAAAGACTCCTAAACTGGAAGTTCTTACGATTCCTGGGGTGGTATATTTTACATTCTGCACCTGTCCTTGTATTTCCTATGTTTCAAGGATAACAGTAATATTATTTCTGTAAATTGACTCTTTTCGTGATTCTTGATTAGGTACTTAACTACTTGGATGATGAAGATTTGATACTGAACTCAATGCCGTGCTGTTTCAAATCTTCTCTTAATCAATTATGCTTTTTAAATTTTTATGGAGATGAATATGAAATACAATTCGTTAAGTTTATCTTAGAAAATTCCCCATATTTAGAGGAGATCAAGATACACTGTTCGAGACGTTTATCAGCTGATATGGAGAAGCTGGATGATATCTTGGACCAATTGGAAGATGTATGCCTGGAAAGTTGTGTCATCAAGTTTTGGTAAATCTTCTTTCTTCTTTGTTTTTCTTTGAATGGGTTCAATTTACTAATTTAACTTCATTCCACTATATAAAAGTGTGGTTGATTAATTAAATAGCATCACTTGTTAGACTACTATGACTAGTTTATGAAGTATGCCATTTGTGAACTGAATCAATTTATGTTATTGGACAAACTCTGTTTGCTGGGAAGTGAAACCGTCTCAGTGTTTAGAGTGGTTGACCCCAAAATGAATCTTGAAGTTGTCTTTCAAACTTCAGTAGGTGGTCTCCTCTTACTTAGAATTTTGTGAAACTGGTTCATTGTCCCCCCACCCTCGCTCGCACACTATCACATCCCAACATTTTTAGACTATGTTAGGTATGGTTCAATGCTGAGTGAAGCCTAAATATATGTGAGTGACTGAATTATAGAATGTTAGGTTAGGTCTTTATGTTAGTGTGAAGTATGGACATAATGGAGAGGAAACATTTAGGGTTCAGCAGTATGCTTAACCATGGCTCCTGCCAATGCTTAGATGTTGAAACACTTAATCGGCAAAGAGATAAACAATTAAACGTGGGTCCTAGTTCCTGTGTGGAAAGTGAAAGGTTTGATTGAAATAACTACTAACTTGATGTGAAGGTAATGCAAGTTGAACTAGACGAATTGTATTATTTGTTTTATCTATTTGAGTTAAAATATTTGGTTAGTACTTGAAAGCTATATGTTCTTTTAAATGCACTAAGTTAATATTGGGCCGCATTTTTGTGATCATAAGAAATTTTTTAATGTTGACTTGAAAGCAAATTCAGAATTCTTTACTGTATTTTCTATATCTTCATAATTTCTTAAACCTCTTTTTCAGTAATATCTTTGCTTTTTTACTTCTTAAAGCTATAGACTTTCTACATTATTTTGTTTGTATTTCCTTCAATTTAATAGGATTTGGCTGATGTTCTTTATAATATTTCTAGTATGTAAAGTGTTTTTTTTTTTTTGCTATGACCTTTTCATGATATGAGCCTAATTTAGCTCCTTCAGATTTGGTTGTTGGGTTAATCTACCGCCTACAGGTTGTTTGGAGCAAATTTCTCATGAATAAGAACATGTTAAGTTTAAACTTATCTTTTGATTTTACTTGGGAATGATTCGATTTGCCTTAACTTTCTTTTCCTTTGCATGTCGTTGTTAGGGATATTGGGGCATTTGGAAGATGTGTGTGTTATTAAAGAGGGATTTGGGATCTTTACCCTGAAATTATGCTGAGCTTCTCACTCATATACATTTCTTTTCATTGTTTCAGTTCCAGCTACGATGATGAATCCTCTGATGATGAATCTGACGAGGATGAAGTGAGTAAAAATACTTTTCATTATAGAGCAAAAATAGTGAACACCAAGTTATTAGTGGCTGTTTCATTGTTAGGTGGAACACCTAGAATGCCTTTGTCTAATTTTCGTCATTGTTTTCAGGCTGCGAATTCTGGGGGGCTCCCTGCTGCAGGTAAGAATGGACATGCTCTGATTGATAAATTGTTTTCTCAATGACTTCATCCTTTCCTTATTGTTAGTTCTTTAAATTAACGACTTGGGTTATACTGTTATAGTGAATCTATTATACCATTTCCCTTTTTTAATCAGTATGAGATGTTGTGGATTCTAAAACATGAGAAATTCAATTTTCTAATCTCAGAGGCACTTTGAATAATTTGGAGCATCATGGATGAAGATCTCATTGGAGGACAGGTTGTGAAAAGACTGAAGTTGGGCTATTTGTCTCAGTGGTGGTGTAGAGTGTAAACTTTTGTCTTTAGTGATTTTCTGCTACTTATTTAATCTTATGTTTCCTCCTTTGTTATGTATAATAGCGGATTGAAAAATGTCTGTTGGTTCTAAGAACATTTTTCATATCTTTCTTTCCCTATAGTTATAGTGTTATGTACAAGTATGTCAAAAATACTAAAAGAGGATATTGCTAGATTATCTCAATGAAAGATCCAATGTTACATTGCTTTTGATAAACTCAATTGTTCAGAAGCACCAAATCAAGATATGTTTTGTATCTTTTTGTAGTAGTTGGAGCAAATGAACTAGCACCAATGTTACATTGCTTCTGAACTTTTGTAGGAAATCAAAACCAGAACAAGTTTCCTTAAGTAATTTTTAGAATCAATTTATGGTTATAGTAGATCACTGTTTTAACTTCTTTTACACTGAATTTTTCCTCTTCTTTTTTCATTTATATGGTTAAAAATCAAAATACTGAGGCGTCATTTCATTCCTGTAGCCAATTCCACTTGGTGGGATAATTGTTTTTGTTGTATATGTTTAAAAATCAAAACCAGGACATGTAATGATGTCATGCAGTAAAAAGCACGTGGTATTTTTGTGAATTGTCATTTCCCATGCTTATGGGTTATAAAGGTGCTTTTAAAAGCTGTTTATGATACATAGGCAAATTTCAACCGGTTTATATAGTGTTAAGTTTTTCATTCACCTGGCTTTGAAGTACTTCACAAAGGAGTGAAATGAGTTGTGGTTATTTGATTGAGAAGAGAATGCAAAGTACTGTGACGAATGGAGAAGTAAGAGGGAAAGAAAGAAAGAATATGTCTCAGTAGATGATTTTAATGATCGGGAAGAGAATGCAAAGTACTGTGACGCATGGAGAAGCAAGAGGGAAAGAAAGAAAGAATATGTCTCTGTAGATGATTTTAATTGAGTTTTTTTGGTTGTAGATGCCAATAAATCTATGGCTGTCAATCCTCAAGAGGTGCTTGTTTAGCTTGTTTAGTGTCTGGCACACCAAAGAAGGCACCTGCTCATGCTGAGGCTGGGTACAATCCTTCTGTTGTACATGACACTAAACAGCGTGAGAAGCTTTCGGAGGTTCGGAGGCTGTCTTCCCCCTACTCAGCTTTTTCCTCTTTGGTGCAGGGTGACATTGCTGGGGATATAGAGCTTCAAGAAGAACCCCATTGTGACAACATTGATTCTATTCATGCTACTGAGCATATAGCAGCTTCAGATCTGGAGAACACAGTTGCTGCTGGTCCCTCAAATTCTTCTTTGGTTCCTGGTTTGGATAGCACACTTCGGCATTGTGCTATGCCTCAACCTATCACTACCAACCACACCTCTCTCACAACTGACAAACTTCTTGTTTTAGAGTCTGACAACACGCTAGTGAATATTGCAATTGCTTGTTCTTCTGAAGCTCAAAGAAGTGTGGACATTCTACAAAAGTTTTGAGGGGATTATCCTAATGAGGGTATTGTCCAACATCAGCTAAAAACAAAAGGCAAAAGAAAACAAACAAATAGCCAAGTTTCACCGAAAAGCACAAGTAATGATCACATCCAAACTCATTCCAAAAATGGTGCAACAAAAAGCAATCCCAAATATTTGTGACTGTCATGTAGATGGTTCTTAATAAGTGCTAGTAGCTAGTTCTGTTGTTTGGAAGCTTAGTTTCTTTGGTTTAAAAGCAAAGCTTTAGCTAGATGATTGTAGTTCCTTTGGTTCTTAGGAATAGTCTTGGCTTTGCTTTCTCATGTGTAAGTTTTGGTTTTTCAAATGTTTTCCGTCACGACTTTTAGTCCTTACCTTTAAGTAAACTCATGTGTATTCTTCAAAAGTTTGACTTATTTTTTGCAATCATGTTTAATACATTATAAAAATTCATCTAGGAAATGTTTAATTCTTTCTAACAAATGATGAATTAAATATGAATTGAGTTTTAGCGCTTAAAAATCCATTTTTTTAATTCATATTTTTGTTAAAAAATTTAAACTTTTATGAGAGAGATTGTTATAATATTCTAAATATCTTTGTAAAGTTTCATTAAAAGATATAAAAGGCAAACATGAGTTGACTTAAAACAAAATTTGAGGGACCAATTGAATTATGCTCTATGTTTTCAATTATTCTACTAGCATTAAGTATTGTTGGAGGAAACTAGACAAATGAACGTTAGACAAATGAATTAAAAGTCAAACTAGGTCTCACTACACTCACTATCTGTGTCTTTCGCATCCTTCCCTCTCGCTGCGACTTCCGAACACAAACCAACTTCTATGAGTGCATTGTCATTGCTAATAAGGTAATCACTTTCTATTCATTCCCTTCTCTTTGTTTACTAGCTAAGTCATCTTCGTTTCATTTTGAGGATTCGTGTATCAGACTGTAATTGAAATCACTGGATTGATTTGTAATAATTGGAATGAACCGAATCTGTCACGAGATTTAAATTAATTAACGTTTCTTCCATTTAGTATTTACATGACAACATTTACTAACATTCTATTCTAACAACACAAGTTTATAATCTGATTTGGGGGGTTGGGTAGCTCAATTGGTTTGAGCTAAGGGTTAAGGAATTTGAGGTTTAGGGTTCAAGTCCTCACAAGAAGAAAAAACTAACATAACAATTAACATACTAACATTTATTTTTCATTAAAAAAAGTTGGCTATGACTGGAATGGAACTGTGATTAATTTTTTCATCTCAACTTAGACAAACCTAGCATACATTGCATTTTCATGCATCCAACTCTTGGGTAGTTGTTTTTGACTTGTGACTCACTTGTATTTGGGCAGGCAGGTAGGAATGGCTCAACCCATAGCCGGTACAATCGCATCACCCAATTTTGATAATGTCGGTGACATGAAAGATATGCTTAGCAACTTACACGATGACATTCTTCTTTATATTCTTTCCTTACTCCCTACCAAAGATGCCGTAAGAACTTCCATATTATCACCGAAGTGGAGGTACTTGTGGACTAAATTATCAGTCTTTGATTTTAAAAATCGTCAATGTTATGGACTCGACGACCAAATTCCTAAGTCAGCAAATTGCCTCTTTGATCTATTGCGCATACTACTTAACAAATCTAATTGTGTAGAAAGGCTCTGTGTTTCAACACACAGAGTTACCGTCGATGTAGACAAAGTTAATTCTTTTATATCTTTTATTTTGAAGTACAATGTCCAAGATTTTGAACTTTCCTTAGTAGGTATTATAGGTGCTACAGTTGTGTTACCCCATAATTTCTTAGCTTCCGCGTCATTGAATAAGCTGCGCTTAGATCTTGACCTCACTCTATATATTCATAGTGGTGTTTGTTTCCCTAGTTTGAAGACATTAGTACTTTCTGAAGTTGCCTTTGTAAATGAGAAATCAGTTCAACGACTTTTCTCTGGGTGCCCTATCTTACAAGAGTTGTCCTTACTTGATTGTTATTGGCAGAACATAAAGCAGATCAATGTTTCAATTTCTACTTTAAGAATGTTGACCATTTATCTTGGCCCTGATTGTCAAGATGGTGACGAGAATTTTATAGTCATCATTGATGCTGTGAATCTTTTATCTTTAAGATGCTGGAGCAATCCAAACGTAAAATTTATCATTGTTAACCCGATCTTCATAGTTGATGCACATGTTGATCATTATGTGTATAACGACGATCCAGAAGATAGATTTGATTGTGCTTATAGTGCAATTGGTCTATTGAGTGTGCTTAGCAGTGTCAAGTCTCTCAAACTAACAAGGGATACTCTCAAGGTATGTTTACTAATTACGTGTATCTTATATTCATTACATATTCTCACTCTATCACAATAGTAATTTAATTTTTGTTTCTTTTTACTAGTGCCTTTCCAATGCAAAAGAAACTCTCCATCTCCTTCCTTCATTCCACAACTTGACACATCTTCATGTTCTTCCGGGGCTTTTCGGCTTCTCTGAGACTTTAGATGTATTGATGGATATTCTCCACAAAACTCCTAAACTAGAAGCCCTTACTTTTCCTAGGGTACATCTTATACCATGCTTCGGTGTTTGCATCTGTTATGTTCCAAGGATAACAGATACATTAATATTATTTCCATTTATTGACTTGTTAACCGTTTCTTGTTTAGGGATTTGAATATGTATTGGATGTTGAAGACTGGATGGAGAGTATACTGCCTAGCTGTTTCCAATCTTCTCTCAAATTATTTAGCATTTCAAATTTCACCGGCGTCGAAGATGAAATCCAATTGGTTGAGTTTATGTTAAAATATGCCACAGTATTAGAGGAGATCCAGATATTTTGTTCGAGATATTTACCTGTCGATGTTGAGAAGCTGTATGATGTATGGAGGCAGTGGCAATCTGAGGGCCTTGATGGTTGTGTCATTAAGTTTCTATAG

Protein sequence

>MS.gene006727.t1

MAPRKWRHATKTLKFKGNNFFGKSSFQGSNSKGTSRVCTFCGKSNHTVETCWKKHGVPPHLQKQFNSAYANHAAPEGDNNVAESPTSVDSKGSAPAITHEQYERLMTLLQGSSLNQSSGTVHASNQVTSMSVGHSPSDRQDLVQRLLHKSNHVQSLGVIIFGVAVDADKVKSLISSVEKHKIQCLQLSLGDPKDNFVLPHSFSAFESLNELRLGLKFTLHIPSGIRFPGLKKLIVSDVIFANKNSVNQLFSGCPVLQELEFCGCYWENIDQINVAISTLRKFRISVDFDPHMTIKIDAVNLLSLSCTCSLTIKFILLNLISLVDAYINFDYPHDEPYAAQSPIELLTGLSSVKSLKLYNNTFERLYHAKDTLHLLPTFYNLTHLYVFSLSPENTNEALMDILRKTPKLEVLTIPGVVLNYLDDEDLILNSMPCCFKSSLNQLCFLNFYGDEYEIQFVKFILENSPYLEEIKIHCSRRLSADMEKLDDILDQLEDVCLESCVIKFCSSYDDESSDDESDEDEAANSGGLPAAVSGTPKKAPAHAEAGYNPSVVHDTKQREKLSEVRRLSSPYSAFSSLVQGDIAGDIELQEEPHCDNIDSIHATEHIAASDLENTVAAGPSNSSLVPGLDSTLRHCAMPQPITTNHTSLTTDKLLVLESDNTLVNIAIACSSEAQRSVDILQKQVGMAQPIAGTIASPNFDNVGDMKDMLSNLHDDILLYILSLLPTKDANIKQINVSISTLRMLTIYLGPDCQDGDENFIVIIDAVNLLSLRCWSNPNVKFIIVNPIFIVDAHVDHYVYNDDPEDRFDCAYSAIGLLSVLSSVKSLKLTRDTLKCLSNAKETLHLLPSFHNLTHLHVLPGLFGFSETLDVLMDILHKTPKLEALTFPRGFEYVLDVEDWMESILPSCFQSSLKLFSISNFTGVEDEIQLVEFMLKYATVLEEIQIFCSRYLPVDVEKLYDVWRQWQSEGLDGCVIKFL