AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003456


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003456.t1 MTR_4g080787 67.010 485 143 5 2 472 10 491 0.0 618
MS.gene003456.t1 MTR_3g048290 64.570 477 156 5 1 468 10 482 0.0 575
MS.gene003456.t1 MTR_4g080773 63.415 492 164 5 2 478 10 500 0.0 553
MS.gene003456.t1 MTR_4g080773 63.992 486 159 5 2 472 10 494 0.0 550
MS.gene003456.t1 MTR_4g080807 57.660 359 117 2 83 440 1 325 6.44e-135 396
MS.gene003456.t1 MTR_4g080590 48.238 454 223 6 2 451 11 456 7.71e-124 369
MS.gene003456.t1 MTR_5g039950 43.902 451 203 8 3 446 12 419 1.78e-104 318
MS.gene003456.t1 MTR_7g023310 44.493 454 230 8 3 446 15 456 1.30e-100 309
MS.gene003456.t1 MTR_4g080590 49.587 363 171 6 2 360 11 365 9.15e-97 297
MS.gene003456.t1 MTR_4g130200 40.848 448 194 6 4 446 10 391 2.65e-93 288
MS.gene003456.t1 MTR_5g039970 51.420 317 148 3 1 311 6 322 1.27e-91 282
MS.gene003456.t1 MTR_7g039630 43.869 367 162 6 3 360 12 343 1.11e-84 265
MS.gene003456.t1 MTR_2g094750 45.722 374 167 11 14 356 92 460 3.75e-77 249
MS.gene003456.t1 MTR_7g023330 38.512 457 202 13 1 446 7 395 8.07e-77 246
MS.gene003456.t1 MTR_4g081030 44.193 353 174 9 12 355 17 355 1.43e-70 229
MS.gene003456.t1 MTR_2g072530 26.087 437 298 11 6 429 5 429 6.54e-29 119
MS.gene003456.t1 MTR_8g467800 28.726 463 276 16 12 448 20 454 1.54e-28 118
MS.gene003456.t1 MTR_8g062270 28.758 459 282 15 12 446 16 453 2.15e-26 111
MS.gene003456.t1 MTR_5g005690 24.775 444 289 9 16 422 25 460 5.48e-26 110
MS.gene003456.t1 MTR_8g014260 28.384 458 282 17 12 446 16 450 9.79e-26 109
MS.gene003456.t1 MTR_5g084070 28.606 409 261 11 12 415 13 395 1.21e-25 109
MS.gene003456.t1 MTR_5g080710 28.404 426 266 14 2 415 23 421 1.67e-25 109
MS.gene003456.t1 MTR_4g032730 26.964 471 289 15 12 446 15 466 1.90e-25 108
MS.gene003456.t1 MTR_4g080813 65.432 81 22 3 1 76 6 85 1.11e-24 98.2
MS.gene003456.t1 MTR_1g115250 26.503 449 288 15 2 437 20 439 1.38e-24 106
MS.gene003456.t1 MTR_1g082260 35.028 177 109 2 54 227 11 184 1.52e-23 97.8
MS.gene003456.t1 MTR_2g094450 39.130 184 93 6 188 367 31 199 4.14e-22 94.4
MS.gene003456.t1 MTR_2g072720 26.539 471 305 21 2 451 31 481 3.80e-21 96.3
MS.gene003456.t1 MTR_3g107100 26.139 417 223 13 12 414 11 356 4.21e-21 95.5
MS.gene003456.t1 MTR_7g094030 24.667 450 296 13 3 429 19 448 1.39e-20 94.7
MS.gene003456.t1 MTR_3g023270 25.269 372 229 11 1 363 1 332 1.44e-20 93.2
MS.gene003456.t1 MTR_0049s0110 24.942 429 255 17 8 414 3 386 2.49e-20 93.6
MS.gene003456.t1 MTR_6g018660 27.219 338 201 10 3 314 9 327 2.88e-20 92.8
MS.gene003456.t1 MTR_2g072730 25.000 452 290 16 5 429 9 438 1.13e-19 91.7
MS.gene003456.t1 MTR_8g468810 27.505 469 289 18 5 446 18 462 1.57e-19 91.3
MS.gene003456.t1 MTR_8g445780 25.666 413 246 13 12 399 13 389 1.92e-19 90.5
MS.gene003456.t1 MTR_8g058965 26.767 467 286 17 12 446 13 455 4.38e-19 90.1
MS.gene003456.t1 MTR_8g468840 29.412 425 260 16 12 414 14 420 1.37e-18 88.6
MS.gene003456.t1 MTR_4g032845 26.118 425 254 16 12 405 3 398 1.76e-18 88.2
MS.gene003456.t1 MTR_0049s0110 29.333 225 144 10 8 227 3 217 1.88e-18 85.9
MS.gene003456.t1 MTR_2g005990 31.754 211 111 9 9 197 3 202 2.99e-18 87.0
MS.gene003456.t1 MTR_8g467800 29.568 301 194 8 12 305 20 309 3.07e-18 86.3
MS.gene003456.t1 MTR_1g038760 27.660 376 221 11 5 358 6 352 4.06e-18 85.9
MS.gene003456.t1 MTR_2g082800 25.476 420 279 14 1 411 16 410 5.63e-18 86.3
MS.gene003456.t1 MTR_0049s0110 29.333 225 144 10 8 227 3 217 6.22e-18 85.1
MS.gene003456.t1 MTR_8g062310 25.951 447 275 17 12 446 25 427 7.69e-18 85.9
MS.gene003456.t1 MTR_0049s0110 29.333 225 144 10 8 227 3 217 8.74e-18 84.7
MS.gene003456.t1 MTR_8g062080 25.597 461 278 19 12 446 23 444 1.31e-17 85.5
MS.gene003456.t1 MTR_2g083840 26.271 472 295 17 2 446 11 456 1.78e-17 85.1
MS.gene003456.t1 MTR_1g038760 27.762 353 211 10 5 335 6 336 1.90e-17 84.0
MS.gene003456.t1 MTR_8g058970 28.736 435 267 15 12 414 19 442 2.22e-17 84.7
MS.gene003456.t1 MTR_7g084080 29.391 279 159 9 12 271 17 276 3.22e-17 82.4
MS.gene003456.t1 MTR_8g468810 28.226 372 224 14 5 355 18 367 6.13e-17 82.8
MS.gene003456.t1 MTR_4g056040 25.840 476 269 18 8 426 5 453 6.37e-17 83.6
MS.gene003456.t1 MTR_5g092960 28.706 425 270 14 12 414 19 432 7.24e-17 83.2
MS.gene003456.t1 MTR_7g021630 27.954 347 205 13 12 335 17 341 7.93e-17 82.4
MS.gene003456.t1 MTR_2g007450 30.332 211 114 5 12 197 16 218 8.50e-17 82.8
MS.gene003456.t1 MTR_7g021630 27.954 347 205 13 12 335 17 341 8.69e-17 82.0
MS.gene003456.t1 MTR_8g468810 31.349 252 157 9 5 248 18 261 1.38e-16 81.3
MS.gene003456.t1 MTR_8g468810 31.349 252 157 9 5 248 18 261 1.84e-16 80.9
MS.gene003456.t1 MTR_8g014160 31.122 196 122 7 12 195 41 235 2.00e-16 81.6
MS.gene003456.t1 MTR_8g468810 31.349 252 157 9 5 248 18 261 2.33e-16 80.9
MS.gene003456.t1 MTR_4g056030 27.376 442 275 17 8 426 5 423 2.97e-16 81.3
MS.gene003456.t1 MTR_7g080440 26.957 345 211 13 5 330 6 328 3.48e-16 80.5
MS.gene003456.t1 MTR_6g025160 27.350 234 151 6 4 229 91 313 3.93e-16 80.1
MS.gene003456.t1 MTR_4g092980 25.926 324 215 9 14 326 16 325 7.25e-16 80.1
MS.gene003456.t1 MTR_2g100590 30.808 198 126 7 12 200 42 237 8.84e-16 79.7
MS.gene003456.t1 MTR_2g100590 30.808 198 126 7 12 200 42 237 8.97e-16 79.7
MS.gene003456.t1 MTR_2g100590 30.808 198 126 7 12 200 42 237 1.06e-15 80.1
MS.gene003456.t1 MTR_2g007400 25.056 443 234 22 12 425 12 385 1.41e-15 79.0
MS.gene003456.t1 MTR_3g019200 26.557 305 202 8 12 307 8 299 1.51e-15 78.6
MS.gene003456.t1 MTR_2g082850 26.431 367 237 13 5 352 12 364 1.65e-15 78.6
MS.gene003456.t1 MTR_7g060470 24.541 436 256 13 12 434 3 378 2.35e-15 78.2
MS.gene003456.t1 MTR_4g045900 22.680 485 303 16 12 434 26 500 3.65e-15 78.2
MS.gene003456.t1 MTR_4g056070 28.101 395 224 14 8 355 5 386 5.52e-15 77.4
MS.gene003456.t1 MTR_3g107160 27.719 285 173 9 8 273 6 276 5.53e-15 77.0
MS.gene003456.t1 MTR_2g091145 27.572 243 163 8 8 243 17 253 6.27e-15 77.0
MS.gene003456.t1 MTR_6g088700 25.478 314 211 7 12 316 14 313 6.55e-15 76.6
MS.gene003456.t1 MTR_4g056020 25.682 440 285 14 8 426 5 423 6.94e-15 77.0
MS.gene003456.t1 MTR_1g090883 26.136 352 238 8 12 355 19 356 1.06e-14 75.9
MS.gene003456.t1 MTR_6g022350 22.560 461 284 11 17 415 12 461 1.48e-14 76.3
MS.gene003456.t1 MTR_3g019220 27.213 305 200 8 12 307 26 317 1.57e-14 76.6
MS.gene003456.t1 MTR_8g077460 28.696 230 144 6 12 222 10 238 1.69e-14 75.5
MS.gene003456.t1 MTR_7g098570 24.798 496 249 21 2 469 10 409 1.84e-14 75.9
MS.gene003456.t1 MTR_2g007360 22.857 455 226 19 1 427 1 358 1.85e-14 75.1
MS.gene003456.t1 MTR_4g050250 30.275 218 116 9 10 198 19 229 2.44e-14 75.1
MS.gene003456.t1 MTR_4g055990 24.788 472 291 15 8 426 5 465 3.66e-14 75.1
MS.gene003456.t1 MTR_4g055990 24.788 472 291 15 8 426 5 465 3.84e-14 75.1
MS.gene003456.t1 MTR_3g019240 26.688 311 208 9 12 314 26 324 4.17e-14 74.3
MS.gene003456.t1 MTR_4g092430 26.627 338 218 12 5 328 36 357 4.27e-14 74.7
MS.gene003456.t1 MTR_8g066650 27.358 318 205 10 7 314 75 376 5.31e-14 74.3
MS.gene003456.t1 MTR_4g103670 25.169 445 231 18 8 414 21 401 6.15e-14 73.9
MS.gene003456.t1 MTR_8g015830 29.596 223 122 6 6 200 2 217 7.70e-14 73.9
MS.gene003456.t1 MTR_8g015830 29.596 223 122 6 6 200 2 217 8.41e-14 73.9
MS.gene003456.t1 MTR_4g050940 25.824 364 229 10 12 363 67 401 9.87e-14 73.9
MS.gene003456.t1 MTR_4g090940 27.083 336 198 11 12 326 159 468 9.95e-14 73.9
MS.gene003456.t1 MTR_3g463820 26.577 222 143 6 12 221 13 226 1.09e-13 72.0
MS.gene003456.t1 MTR_1g038710 24.368 435 279 14 9 415 16 428 1.36e-13 73.2
MS.gene003456.t1 MTR_4g092430 26.582 316 203 11 5 307 36 335 1.40e-13 73.2
MS.gene003456.t1 MTR_4g092440 24.281 313 214 6 12 307 32 338 1.61e-13 72.8
MS.gene003456.t1 MTR_5g083890 31.797 217 107 7 12 199 6 210 1.79e-13 72.8
MS.gene003456.t1 MTR_5g092960 29.888 358 224 13 12 353 19 365 1.85e-13 72.4
MS.gene003456.t1 MTR_3g105060 29.630 189 119 5 12 195 14 193 2.11e-13 72.0
MS.gene003456.t1 MTR_5g073420 29.843 191 127 7 9 195 8 195 2.29e-13 72.0
MS.gene003456.t1 MTR_1g021820 31.156 199 126 8 8 201 24 216 2.31e-13 72.4
MS.gene003456.t1 MTR_3g023630 27.568 185 131 3 11 195 7 188 2.50e-13 71.6
MS.gene003456.t1 MTR_5g087940 28.696 230 131 7 12 228 26 235 2.55e-13 72.0
MS.gene003456.t1 MTR_3g108150 24.235 425 229 16 12 420 13 360 2.99e-13 71.6
MS.gene003456.t1 MTR_4g092440 24.281 313 214 6 12 307 32 338 3.33e-13 72.0
MS.gene003456.t1 MTR_3g036250 30.412 194 116 5 11 195 4 187 3.47e-13 71.2
MS.gene003456.t1 MTR_4g093690 30.303 231 136 9 7 226 13 229 3.50e-13 70.1
MS.gene003456.t1 MTR_3g036320 24.859 354 223 13 14 346 22 353 6.35e-13 70.5
MS.gene003456.t1 MTR_5g038430 29.954 217 137 9 12 221 96 304 6.40e-13 71.2
MS.gene003456.t1 MTR_5g045510 28.571 203 125 7 1 195 1 191 6.48e-13 70.5
MS.gene003456.t1 MTR_3g023470 25.360 347 205 10 7 328 10 327 7.79e-13 70.5
MS.gene003456.t1 MTR_7g056447 29.500 200 116 7 4 193 1 185 8.18e-13 69.3
MS.gene003456.t1 MTR_2g102420 44.944 89 43 2 268 356 5 87 9.08e-13 64.3
MS.gene003456.t1 MTR_3g108560 29.353 201 105 6 12 199 20 196 1.01e-12 69.3
MS.gene003456.t1 MTR_3g108560 29.353 201 105 6 12 199 20 196 1.13e-12 69.7
MS.gene003456.t1 MTR_8g085430 29.744 195 127 4 12 199 11 202 1.24e-12 69.3
MS.gene003456.t1 MTR_4g024720 37.755 98 60 1 12 108 17 114 1.45e-12 67.0
MS.gene003456.t1 MTR_0543s0010 29.915 234 142 8 6 231 79 298 1.60e-12 69.7
MS.gene003456.t1 MTR_0492s0020 29.915 234 142 8 6 231 79 298 1.69e-12 69.7
MS.gene003456.t1 MTR_4g098590 28.358 201 123 6 14 199 1 195 1.79e-12 69.3
MS.gene003456.t1 MTR_7g007080 25.472 424 223 15 12 415 4 354 1.90e-12 69.3
MS.gene003456.t1 MTR_6g040270 24.574 411 225 14 14 414 10 345 1.97e-12 68.9
MS.gene003456.t1 MTR_4g119700 29.767 215 120 7 12 200 6 215 2.11e-12 69.7
MS.gene003456.t1 MTR_3g448340 23.093 472 315 15 12 450 6 462 2.22e-12 69.3
MS.gene003456.t1 MTR_5g060570 28.571 217 144 6 12 224 17 226 2.30e-12 67.4
MS.gene003456.t1 MTR_3g023440 27.134 328 204 12 12 326 3 308 2.44e-12 68.9
MS.gene003456.t1 MTR_7g056287 21.480 419 249 13 12 423 3 348 2.72e-12 68.6
MS.gene003456.t1 MTR_8g468760 26.316 456 269 16 12 446 9 418 2.89e-12 68.9
MS.gene003456.t1 MTR_5g044800 27.520 367 214 15 12 349 30 373 2.93e-12 68.9
MS.gene003456.t1 MTR_1g011410 28.390 236 142 6 8 242 3 212 3.15e-12 69.3
MS.gene003456.t1 MTR_1g011410 26.106 226 159 7 8 231 311 530 1.60e-11 67.0
MS.gene003456.t1 MTR_5g021550 31.944 144 90 3 12 147 19 162 3.16e-12 65.1
MS.gene003456.t1 MTR_7g098510 27.692 195 127 5 6 195 12 197 3.36e-12 68.6
MS.gene003456.t1 MTR_1g077420 29.949 197 120 7 12 200 4 190 3.38e-12 67.0
MS.gene003456.t1 MTR_8g062010 28.293 205 132 8 4 200 1 198 4.24e-12 68.2
MS.gene003456.t1 MTR_6g088705 26.606 218 133 5 10 211 17 223 4.54e-12 66.2
MS.gene003456.t1 MTR_5g044860 27.520 367 214 15 12 349 30 373 4.62e-12 68.2
MS.gene003456.t1 MTR_8g465380 26.543 324 203 13 1 304 1 309 4.90e-12 67.8
MS.gene003456.t1 MTR_5g008920 29.630 189 113 6 14 195 14 189 5.57e-12 67.8
MS.gene003456.t1 MTR_7g032380 28.272 191 128 5 12 199 11 195 5.58e-12 67.4
MS.gene003456.t1 MTR_3g082890 22.951 427 240 13 12 416 97 456 5.59e-12 68.2
MS.gene003456.t1 MTR_1g011430 25.672 335 194 13 12 305 7 327 6.92e-12 67.4
MS.gene003456.t1 MTR_7g115270 28.641 206 122 5 5 195 5 200 7.72e-12 67.4
MS.gene003456.t1 MTR_1g013630 32.524 206 120 8 8 201 35 233 8.11e-12 67.0
MS.gene003456.t1 MTR_8g465650 26.316 323 206 13 1 304 1 310 8.31e-12 67.0
MS.gene003456.t1 MTR_2g082860 39.759 83 44 3 2 81 14 93 9.44e-12 62.4
MS.gene003456.t1 MTR_4g045680 27.628 333 202 12 3 318 8 318 9.84e-12 67.0
MS.gene003456.t1 MTR_1g041245 28.646 192 118 4 12 195 11 191 1.02e-11 67.0
MS.gene003456.t1 MTR_1g115245 23.346 257 167 7 3 246 17 256 1.14e-11 66.2
MS.gene003456.t1 MTR_7g033470 47.619 63 31 1 9 71 11 71 1.18e-11 62.8
MS.gene003456.t1 MTR_3g099830 27.320 194 111 6 12 197 12 183 1.44e-11 66.2
MS.gene003456.t1 MTR_3g107120 30.303 198 120 6 12 195 9 202 1.60e-11 66.2
MS.gene003456.t1 MTR_3g006580 25.472 318 211 8 14 316 35 341 1.82e-11 66.2
MS.gene003456.t1 MTR_3g463830 27.727 220 138 6 12 220 63 272 1.96e-11 65.9
MS.gene003456.t1 MTR_3g110010 29.255 188 126 4 12 199 13 193 2.21e-11 66.6
MS.gene003456.t1 MTR_7g025650 29.302 215 121 7 12 200 19 228 3.01e-11 65.9
MS.gene003456.t1 MTR_5g073370 24.405 336 190 12 12 316 5 307 3.43e-11 65.1
MS.gene003456.t1 MTR_3g109982 29.255 188 126 4 12 199 13 193 3.87e-11 65.9
MS.gene003456.t1 MTR_1g021825 23.950 238 171 6 8 242 13 243 4.22e-11 65.1
MS.gene003456.t1 MTR_2g008320 28.866 194 128 5 9 197 49 237 4.35e-11 65.1
MS.gene003456.t1 MTR_1g021825 23.529 238 172 6 8 242 84 314 4.84e-11 65.1
MS.gene003456.t1 MTR_7g056277 20.952 420 250 13 12 423 259 604 5.59e-11 65.5
MS.gene003456.t1 MTR_2g100570 30.151 199 126 8 12 200 72 267 6.68e-11 65.1
MS.gene003456.t1 MTR_3g082890 23.583 441 257 16 12 416 17 413 6.76e-11 64.7
MS.gene003456.t1 MTR_4g050930 27.532 316 197 12 12 314 29 325 6.91e-11 64.3
MS.gene003456.t1 MTR_1g090900 29.240 171 113 3 8 176 7 171 7.01e-11 62.0
MS.gene003456.t1 MTR_4g055580 23.391 466 299 12 8 426 96 550 7.28e-11 64.7
MS.gene003456.t1 MTR_7g088260 23.601 411 235 16 12 414 91 430 7.52e-11 64.7
MS.gene003456.t1 MTR_1g014450 27.917 240 152 9 8 235 12 242 7.63e-11 64.3
MS.gene003456.t1 MTR_2g100570 30.151 199 126 8 12 200 72 267 7.92e-11 64.3
MS.gene003456.t1 MTR_2g100570 30.151 199 126 8 12 200 72 267 7.95e-11 64.7
MS.gene003456.t1 MTR_8g015770 27.602 221 128 6 12 200 6 226 8.54e-11 64.7
MS.gene003456.t1 MTR_3g467400 28.079 203 128 5 11 198 2 201 9.34e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003456.t1 AT4G14096 27.056 462 300 16 8 446 2 449 9.89e-31 124
MS.gene003456.t1 AT4G14096 27.056 462 300 16 8 446 2 449 9.89e-31 124
MS.gene003456.t1 AT5G38590 28.000 425 249 13 12 418 2 387 2.44e-29 119
MS.gene003456.t1 AT1G78750 29.078 423 266 14 12 414 18 426 3.96e-29 119
MS.gene003456.t1 AT1G78750 29.078 423 266 14 12 414 18 426 3.96e-29 119
MS.gene003456.t1 AT1G66290 27.685 419 261 15 12 414 29 421 7.64e-29 119
MS.gene003456.t1 AT4G14103 26.566 463 276 18 8 446 2 424 1.03e-28 118
MS.gene003456.t1 AT3G58860 27.152 453 297 13 12 446 7 444 1.14e-28 118
MS.gene003456.t1 AT3G59200 25.949 474 299 13 9 445 4 462 1.20e-28 119
MS.gene003456.t1 AT3G59200 29.223 373 221 11 9 353 4 361 1.22e-28 116
MS.gene003456.t1 AT4G14103 29.348 368 233 14 8 359 2 358 2.66e-28 116
MS.gene003456.t1 AT4G14103 29.348 368 233 14 8 359 2 358 2.66e-28 116
MS.gene003456.t1 AT4G00160 26.824 466 288 15 9 451 13 448 3.91e-28 117
MS.gene003456.t1 AT4G10400 25.740 439 290 10 12 446 2 408 9.17e-28 115
MS.gene003456.t1 AT4G10400 25.740 439 290 10 12 446 2 408 9.17e-28 115
MS.gene003456.t1 AT4G10400 25.740 439 290 10 12 446 2 408 9.17e-28 115
MS.gene003456.t1 AT3G58900 29.157 439 260 15 12 415 2 424 1.55e-27 115
MS.gene003456.t1 AT4G00315 27.412 456 293 14 12 446 2 440 1.57e-27 115
MS.gene003456.t1 AT3G52680 26.907 472 282 15 6 450 15 450 2.60e-27 114
MS.gene003456.t1 AT5G44950 27.739 429 263 15 9 414 1 405 6.27e-27 113
MS.gene003456.t1 AT5G53840 26.977 430 291 11 12 437 18 428 7.50e-27 113
MS.gene003456.t1 AT2G26860 27.962 422 258 14 12 414 2 396 1.47e-26 111
MS.gene003456.t1 AT2G26860 27.962 422 258 14 12 414 2 396 1.47e-26 111
MS.gene003456.t1 AT3G49030 28.194 454 285 18 6 446 15 440 1.77e-26 112
MS.gene003456.t1 AT3G58880 30.387 362 225 13 12 357 3 353 2.67e-26 111
MS.gene003456.t1 AT3G59240 27.669 459 282 18 12 440 8 446 2.81e-26 112
MS.gene003456.t1 AT4G13985 27.231 437 281 15 12 427 19 439 5.04e-26 110
MS.gene003456.t1 AT5G22730 27.483 433 277 15 9 419 24 441 5.63e-26 110
MS.gene003456.t1 AT5G22730 27.483 433 277 15 9 419 24 441 5.63e-26 110
MS.gene003456.t1 AT4G22280 27.938 451 273 14 12 447 2 415 7.38e-26 109
MS.gene003456.t1 AT2G42730 26.932 453 281 14 10 432 3 435 2.16e-25 108
MS.gene003456.t1 AT1G32375 26.037 434 266 15 12 426 2 399 4.34e-25 107
MS.gene003456.t1 AT1G32375 26.037 434 266 15 12 426 2 399 4.34e-25 107
MS.gene003456.t1 AT3G62440 28.756 386 210 13 12 357 2 362 4.46e-25 107
MS.gene003456.t1 AT3G59210 25.800 469 306 15 8 445 3 460 5.34e-25 108
MS.gene003456.t1 AT3G59210 25.800 469 306 15 8 445 3 460 5.34e-25 108
MS.gene003456.t1 AT3G59210 25.800 469 306 15 8 445 3 460 5.34e-25 108
MS.gene003456.t1 AT3G59210 25.800 469 306 15 8 445 3 460 5.34e-25 108
MS.gene003456.t1 AT3G59210 25.800 469 306 15 8 445 3 460 5.34e-25 108
MS.gene003456.t1 AT3G58960 28.415 366 228 14 12 357 2 353 5.43e-25 107
MS.gene003456.t1 AT2G04230 26.949 449 297 13 2 438 3 432 5.62e-25 107
MS.gene003456.t1 AT1G16930 28.312 385 242 12 11 381 14 378 7.52e-25 107
MS.gene003456.t1 AT1G16930 28.312 385 242 12 11 381 14 378 7.52e-25 107
MS.gene003456.t1 AT1G16930 28.312 385 242 12 11 381 14 378 7.52e-25 107
MS.gene003456.t1 AT4G22280 28.652 356 215 10 12 355 2 330 1.22e-24 104
MS.gene003456.t1 AT3G59230 26.695 472 298 18 12 445 12 473 1.60e-24 106
MS.gene003456.t1 AT5G22660 28.333 420 266 15 12 414 13 414 1.75e-24 106
MS.gene003456.t1 AT5G35995 31.944 360 215 14 12 359 5 346 5.48e-24 104
MS.gene003456.t1 AT5G35995 31.944 360 215 14 12 359 5 346 5.48e-24 104
MS.gene003456.t1 AT1G66310 28.140 430 265 16 3 414 10 413 5.75e-24 104
MS.gene003456.t1 AT3G60040 29.280 403 249 15 12 397 13 396 7.61e-24 105
MS.gene003456.t1 AT5G38396 26.611 481 293 17 12 452 2 462 8.11e-24 104
MS.gene003456.t1 AT5G53635 25.708 424 272 12 13 414 1 403 9.14e-24 103
MS.gene003456.t1 AT3G60040 29.280 403 249 15 12 397 230 613 1.24e-23 104
MS.gene003456.t1 AT3G60040 29.280 403 249 15 12 397 232 615 1.28e-23 104
MS.gene003456.t1 AT1G55660 26.282 468 283 14 12 446 53 491 1.29e-23 103
MS.gene003456.t1 AT3G60040 29.280 403 249 15 12 397 233 616 1.32e-23 105
MS.gene003456.t1 AT5G38590 31.280 211 136 3 12 220 2 205 1.32e-23 100
MS.gene003456.t1 AT3G58980 26.233 446 279 17 12 427 2 427 1.47e-23 104
MS.gene003456.t1 AT3G60040 29.280 403 249 15 12 397 232 615 1.48e-23 104
MS.gene003456.t1 AT3G03030 26.712 438 276 16 12 415 2 428 1.73e-23 103
MS.gene003456.t1 AT3G58920 28.967 397 216 20 12 365 2 375 2.91e-23 102
MS.gene003456.t1 AT3G58900 30.818 318 193 10 12 307 2 314 3.33e-23 100
MS.gene003456.t1 AT3G26922 29.851 268 167 6 7 263 9 266 4.34e-23 99.8
MS.gene003456.t1 AT3G26922 29.851 268 167 6 7 263 9 266 4.34e-23 99.8
MS.gene003456.t1 AT1G78840 30.024 423 252 19 12 414 5 403 5.77e-23 101
MS.gene003456.t1 AT1G78840 30.024 423 252 19 12 414 5 403 5.77e-23 101
MS.gene003456.t1 AT5G22670 25.917 436 278 14 5 418 4 416 6.42e-23 101
MS.gene003456.t1 AT3G58900 30.696 316 192 10 12 305 2 312 9.06e-23 99.4
MS.gene003456.t1 AT3G58900 30.696 316 192 10 12 305 2 312 9.06e-23 99.4
MS.gene003456.t1 AT4G13965 27.064 436 283 13 3 432 1 407 1.06e-22 100
MS.gene003456.t1 AT1G55030 31.797 217 140 3 4 220 1 209 1.30e-22 100
MS.gene003456.t1 AT3G44810 28.395 405 263 14 17 404 12 406 1.42e-22 100
MS.gene003456.t1 AT3G52680 26.776 366 220 9 6 358 15 345 1.61e-22 99.4
MS.gene003456.t1 AT1G55030 33.014 209 132 3 12 220 19 219 1.73e-22 100
MS.gene003456.t1 AT1G06630 31.092 357 216 13 12 355 12 351 1.95e-22 99.0
MS.gene003456.t1 AT1G06630 31.092 357 216 13 12 355 12 351 1.95e-22 99.0
MS.gene003456.t1 AT3G59160 26.407 462 268 16 10 427 11 444 3.17e-22 99.8
MS.gene003456.t1 AT1G06630 31.092 357 216 13 12 355 12 351 3.28e-22 99.0
MS.gene003456.t1 AT1G06630 31.092 357 216 13 12 355 12 351 3.28e-22 99.0
MS.gene003456.t1 AT1G06630 31.092 357 216 13 12 355 12 351 3.28e-22 99.0
MS.gene003456.t1 AT1G06630 31.092 357 216 13 12 355 12 351 3.28e-22 99.0
MS.gene003456.t1 AT3G59170 28.261 460 256 19 9 415 4 442 4.35e-22 99.4
MS.gene003456.t1 AT1G58310 28.278 389 232 12 12 364 8 385 5.06e-22 99.4
MS.gene003456.t1 AT1G06630 31.092 357 216 13 12 355 21 360 6.04e-22 98.2
MS.gene003456.t1 AT1G06630 31.092 357 216 13 12 355 12 351 7.68e-22 98.6
MS.gene003456.t1 AT5G25860 24.651 430 286 12 10 419 10 421 8.13e-22 98.2
MS.gene003456.t1 AT4G15060 26.214 412 251 16 12 398 26 409 8.79e-22 97.8
MS.gene003456.t1 AT3G59190 27.202 386 227 16 10 360 10 376 1.15e-21 97.1
MS.gene003456.t1 AT5G60610 27.873 409 249 16 12 406 2 378 1.43e-21 96.7
MS.gene003456.t1 AT5G60610 27.873 409 249 16 12 406 2 378 1.43e-21 96.7
MS.gene003456.t1 AT1G66300 26.415 424 268 14 12 415 29 428 1.60e-21 97.4
MS.gene003456.t1 AT1G69630 28.103 427 258 17 12 414 18 419 2.00e-21 97.1
MS.gene003456.t1 AT3G49030 33.937 221 136 7 6 222 15 229 2.12e-21 96.7
MS.gene003456.t1 AT5G22610 27.674 430 266 16 12 412 18 431 2.21e-21 97.4
MS.gene003456.t1 AT3G59190 27.586 377 231 14 10 358 10 372 2.24e-21 97.4
MS.gene003456.t1 AT5G22700 27.610 431 263 16 11 414 5 413 4.47e-21 95.9
MS.gene003456.t1 AT5G22700 27.610 431 263 16 11 414 5 413 4.47e-21 95.9
MS.gene003456.t1 AT5G22700 27.610 431 263 16 11 414 5 413 4.47e-21 95.9
MS.gene003456.t1 AT5G22700 27.610 431 263 16 11 414 5 413 4.47e-21 95.9
MS.gene003456.t1 AT4G15060 30.556 216 136 5 12 220 172 380 6.00e-21 96.3
MS.gene003456.t1 AT5G22700 27.610 431 263 16 11 414 42 450 9.58e-21 95.1
MS.gene003456.t1 AT4G09920 26.316 285 179 7 12 275 2 276 1.61e-20 92.0
MS.gene003456.t1 AT4G09920 26.316 285 179 7 12 275 2 276 1.61e-20 92.0
MS.gene003456.t1 AT4G09920 26.316 285 179 7 12 275 2 276 1.61e-20 92.0
MS.gene003456.t1 AT5G41840 24.521 522 298 16 9 445 11 521 2.42e-20 94.4
MS.gene003456.t1 AT3G58940 26.697 442 266 18 12 425 2 413 2.46e-20 94.7
MS.gene003456.t1 AT3G58940 26.697 442 266 18 12 425 2 413 2.46e-20 94.7
MS.gene003456.t1 AT4G09920 26.241 282 177 7 12 272 2 273 2.65e-20 92.0
MS.gene003456.t1 AT4G09920 26.241 282 177 7 12 272 2 273 2.65e-20 92.0
MS.gene003456.t1 AT1G55660 30.045 223 129 4 12 220 53 262 4.39e-20 92.0
MS.gene003456.t1 AT1G56610 29.006 362 230 11 14 358 12 363 4.73e-20 93.2
MS.gene003456.t1 AT1G56610 29.006 362 230 11 14 358 75 426 5.99e-20 93.2
MS.gene003456.t1 AT3G26930 27.644 416 247 14 12 409 21 400 6.39e-20 92.4
MS.gene003456.t1 AT5G56410 26.683 416 254 13 19 406 10 402 7.05e-20 92.8
MS.gene003456.t1 AT2G26030 26.118 425 268 17 12 412 4 406 8.95e-20 92.0
MS.gene003456.t1 AT2G26030 26.118 425 268 17 12 412 4 406 8.95e-20 92.0
MS.gene003456.t1 AT1G13780 26.439 469 290 21 12 447 10 456 9.75e-20 92.0
MS.gene003456.t1 AT3G50710 27.674 430 270 16 12 426 2 405 1.01e-19 91.7
MS.gene003456.t1 AT3G59250 27.293 447 266 17 12 441 7 411 1.13e-19 91.7
MS.gene003456.t1 AT3G03040 26.542 373 236 11 12 359 2 361 1.29e-19 91.7
MS.gene003456.t1 AT2G26030 25.882 425 274 16 12 412 4 411 1.34e-19 91.7
MS.gene003456.t1 AT4G26340 25.476 420 260 12 12 413 2 386 1.64e-19 90.9
MS.gene003456.t1 AT3G03030 28.527 319 199 12 12 305 2 316 2.00e-19 89.7
MS.gene003456.t1 AT5G44960 25.587 426 249 18 12 414 5 385 2.09e-19 90.9
MS.gene003456.t1 AT1G51370 25.708 424 256 17 12 414 19 404 2.16e-19 90.9
MS.gene003456.t1 AT3G49480 24.943 437 279 13 1 414 1 411 2.53e-19 90.9
MS.gene003456.t1 AT1G80470 24.221 417 284 11 11 414 14 411 2.70e-19 90.9
MS.gene003456.t1 AT5G22730 26.997 363 234 12 9 353 24 373 3.41e-19 89.7
MS.gene003456.t1 AT5G44980 26.761 426 269 19 12 417 4 406 3.64e-19 90.1
MS.gene003456.t1 AT5G44980 26.761 426 269 19 12 417 4 406 3.64e-19 90.1
MS.gene003456.t1 AT5G27750 23.843 432 288 14 12 414 5 424 5.86e-19 89.7
MS.gene003456.t1 AT1G78760 25.995 427 261 16 12 414 16 411 6.30e-19 89.7
MS.gene003456.t1 AT5G56420 25.686 401 267 10 12 406 6 381 1.03e-18 88.6
MS.gene003456.t1 AT5G56420 25.686 401 267 10 12 406 6 381 1.03e-18 88.6
MS.gene003456.t1 AT5G56420 25.686 401 267 10 12 406 6 381 1.03e-18 88.6
MS.gene003456.t1 AT3G42770 26.995 426 273 19 17 428 4 405 1.05e-18 89.4
MS.gene003456.t1 AT5G22610 26.540 422 251 14 12 412 18 401 1.14e-18 89.0
MS.gene003456.t1 AT1G78730 24.728 368 212 9 12 357 22 346 1.18e-18 88.6
MS.gene003456.t1 AT5G56390 26.682 431 266 15 12 423 2 401 1.42e-18 88.2
MS.gene003456.t1 AT4G26350 24.821 419 282 14 12 418 2 399 1.80e-18 88.2
MS.gene003456.t1 AT5G56700 26.446 363 203 13 72 406 16 342 2.17e-18 87.0
MS.gene003456.t1 AT5G02930 31.282 195 118 5 8 200 24 204 2.36e-18 87.8
MS.gene003456.t1 AT5G22660 28.939 311 199 8 12 310 13 313 2.88e-18 85.9
MS.gene003456.t1 AT1G66320 24.601 439 275 18 11 422 28 437 3.47e-18 87.4
MS.gene003456.t1 AT5G56690 28.571 210 146 3 14 220 4 212 3.50e-18 87.0
MS.gene003456.t1 AT3G28410 27.987 318 190 10 2 307 18 308 4.99e-18 87.0
MS.gene003456.t1 AT5G38390 27.416 445 247 19 12 415 2 411 6.81e-18 86.3
MS.gene003456.t1 AT2G29930 28.646 384 209 18 5 359 4 351 8.06e-18 86.3
MS.gene003456.t1 AT2G29930 28.646 384 209 18 5 359 4 351 8.06e-18 86.3
MS.gene003456.t1 AT1G06630 31.229 301 178 12 12 299 12 296 1.05e-17 84.3
MS.gene003456.t1 AT5G56440 26.887 424 261 16 12 414 2 397 1.46e-17 85.1
MS.gene003456.t1 AT2G42720 26.630 368 229 14 12 358 2 349 1.51e-17 85.1
MS.gene003456.t1 AT1G13780 28.391 317 194 13 12 305 10 316 1.87e-17 84.0
MS.gene003456.t1 AT5G38392 31.034 203 119 8 12 199 2 198 2.13e-17 81.3
MS.gene003456.t1 AT5G56400 25.277 451 292 11 12 446 33 454 2.43e-17 84.7
MS.gene003456.t1 AT3G49040 29.864 221 130 7 12 221 17 223 2.47e-17 83.2
MS.gene003456.t1 AT3G59000 27.556 450 274 19 12 425 2 435 2.52e-17 84.7
MS.gene003456.t1 AT5G38570 23.282 451 253 17 12 446 2 375 2.72e-17 84.0
MS.gene003456.t1 AT5G27750 24.269 342 223 11 12 326 5 337 2.76e-17 84.0
MS.gene003456.t1 AT5G18780 26.277 411 278 12 12 412 11 406 3.16e-17 84.3
MS.gene003456.t1 AT5G18780 26.277 411 278 12 12 412 11 406 3.16e-17 84.3
MS.gene003456.t1 AT4G27050 27.034 381 220 16 12 359 4 359 3.24e-17 84.3
MS.gene003456.t1 AT4G27050 27.034 381 220 16 12 359 4 359 3.24e-17 84.3
MS.gene003456.t1 AT4G27050 27.034 381 220 16 12 359 4 359 3.24e-17 84.3
MS.gene003456.t1 AT4G27050 27.034 381 220 16 12 359 4 359 3.24e-17 84.3
MS.gene003456.t1 AT4G27050 27.034 381 220 16 12 359 4 359 3.24e-17 84.3
MS.gene003456.t1 AT3G49020 25.223 448 282 14 12 441 22 434 3.70e-17 84.0
MS.gene003456.t1 AT4G00320 25.936 374 247 12 8 358 9 375 3.78e-17 84.3
MS.gene003456.t1 AT1G51370 26.031 388 235 15 12 382 19 371 3.98e-17 84.0
MS.gene003456.t1 AT1G52650 25.740 439 268 18 12 415 2 417 4.28e-17 84.0
MS.gene003456.t1 AT1G51370 27.011 348 218 13 12 353 19 336 8.68e-17 82.0
MS.gene003456.t1 AT5G44980 28.165 316 197 14 12 310 4 306 1.10e-16 81.3
MS.gene003456.t1 AT5G44980 28.165 316 197 14 12 310 4 306 1.10e-16 81.3
MS.gene003456.t1 AT3G62430 27.642 369 237 14 12 367 2 353 1.19e-16 82.4
MS.gene003456.t1 AT5G18780 26.496 351 237 9 12 355 11 347 1.39e-16 81.6
MS.gene003456.t1 AT5G18780 26.496 351 237 9 12 355 11 347 1.39e-16 81.6
MS.gene003456.t1 AT5G56700 33.333 153 99 2 72 221 16 168 1.51e-16 80.5
MS.gene003456.t1 AT3G49150 25.721 451 277 18 12 424 16 446 2.20e-16 82.0
MS.gene003456.t1 AT5G41630 29.630 216 136 8 1 203 1 213 2.35e-16 81.6
MS.gene003456.t1 AT5G15620 27.901 362 225 15 12 357 2 343 3.07e-16 81.3
MS.gene003456.t1 AT5G62970 23.934 422 264 13 19 406 10 408 3.49e-16 81.3
MS.gene003456.t1 AT3G51530 26.077 418 258 18 9 409 27 410 5.52e-16 80.5
MS.gene003456.t1 AT1G22000 25.891 421 263 11 14 414 31 422 6.23e-16 80.5
MS.gene003456.t1 AT1G60400 26.154 325 215 11 12 326 14 323 7.85e-16 79.7
MS.gene003456.t1 AT4G13960 25.234 428 283 16 12 415 2 416 8.26e-16 80.1
MS.gene003456.t1 AT4G13960 25.234 428 283 16 12 415 2 416 8.26e-16 80.1
MS.gene003456.t1 AT5G41830 25.722 381 239 13 8 358 9 375 8.40e-16 80.1
MS.gene003456.t1 AT5G50270 26.077 418 269 16 12 414 2 394 8.77e-16 79.7
MS.gene003456.t1 AT3G26922 27.126 247 159 6 28 263 1 237 8.81e-16 78.2
MS.gene003456.t1 AT3G26922 27.126 247 159 6 28 263 1 237 8.81e-16 78.2
MS.gene003456.t1 AT5G02700 27.445 317 192 11 2 307 17 306 1.05e-15 79.7
MS.gene003456.t1 AT3G59150 26.817 399 251 13 11 386 12 392 1.19e-15 79.7
MS.gene003456.t1 AT4G03220 25.498 502 281 17 12 448 24 497 1.82e-15 79.3
MS.gene003456.t1 AT1G05080 26.415 424 263 11 12 414 13 408 2.31e-15 78.6
MS.gene003456.t1 AT1G60410 26.463 393 258 13 4 384 1 374 2.33e-15 78.2
MS.gene003456.t1 AT3G58930 24.439 446 282 16 12 415 2 434 2.94e-15 78.6
MS.gene003456.t1 AT3G58930 24.439 446 282 16 12 415 2 434 2.94e-15 78.6
MS.gene003456.t1 AT3G58930 24.439 446 282 16 12 415 2 434 2.94e-15 78.6
MS.gene003456.t1 AT5G22720 30.579 242 142 8 12 242 23 249 2.96e-15 78.2
MS.gene003456.t1 AT1G56610 28.417 278 181 7 96 358 50 324 3.31e-15 78.2
MS.gene003456.t1 AT3G26930 25.602 332 200 11 38 357 2 298 5.38e-15 77.4
MS.gene003456.t1 AT5G02920 30.102 196 116 8 10 201 26 204 6.29e-15 75.1
MS.gene003456.t1 AT5G56820 23.112 437 255 15 11 422 14 394 1.65e-14 75.9
MS.gene003456.t1 AT1G21990 25.464 377 238 13 9 359 6 365 1.70e-14 75.9
MS.gene003456.t1 AT1G64540 27.778 342 194 13 12 326 5 320 1.84e-14 75.9
MS.gene003456.t1 AT1G64540 27.778 342 194 13 12 326 5 320 1.84e-14 75.9
MS.gene003456.t1 AT5G18770 27.298 359 240 13 12 360 24 371 1.90e-14 75.1
MS.gene003456.t1 AT3G59180 26.065 399 238 15 91 445 60 445 2.47e-14 75.5
MS.gene003456.t1 AT3G44060 27.273 220 145 6 17 229 4 215 2.57e-14 75.1
MS.gene003456.t1 AT5G22700 28.782 271 174 7 11 273 42 301 3.04e-14 75.1
MS.gene003456.t1 AT1G48400 31.818 220 133 10 12 220 10 223 6.45e-14 74.3
MS.gene003456.t1 AT5G18770 27.841 352 229 14 12 351 24 362 6.62e-14 74.3
MS.gene003456.t1 AT1G48400 31.818 220 133 10 12 220 10 223 9.02e-14 73.9
MS.gene003456.t1 AT2G29910 24.927 341 215 11 12 326 5 330 1.48e-13 72.4
MS.gene003456.t1 AT2G29910 24.927 341 215 11 12 326 5 330 1.48e-13 72.4
MS.gene003456.t1 AT2G29910 24.927 341 215 11 12 326 5 330 1.48e-13 72.4
MS.gene003456.t1 AT2G29910 24.927 341 215 11 12 326 5 330 1.48e-13 72.4
MS.gene003456.t1 AT5G53640 30.890 191 113 7 12 197 22 198 1.75e-13 70.1
MS.gene003456.t1 AT2G29910 24.927 341 215 11 12 326 29 354 2.33e-13 72.0
MS.gene003456.t1 AT1G16940 25.849 383 235 17 9 381 8 351 4.15e-13 71.6
MS.gene003456.t1 AT1G26890 29.524 210 129 2 14 218 40 235 4.77e-13 70.9
MS.gene003456.t1 AT1G26890 29.524 210 129 2 14 218 40 235 4.77e-13 70.9
MS.gene003456.t1 AT5G38590 31.159 138 94 1 83 220 34 170 5.22e-13 69.3
MS.gene003456.t1 AT3G54910 23.823 361 246 10 59 414 6 342 6.59e-13 70.5
MS.gene003456.t1 AT3G54910 23.823 361 246 10 59 414 6 342 6.59e-13 70.5
MS.gene003456.t1 AT3G54910 23.823 361 246 10 59 414 6 342 6.59e-13 70.5
MS.gene003456.t1 AT5G44940 29.442 197 118 8 12 197 5 191 7.11e-13 70.5
MS.gene003456.t1 AT2G29910 26.038 265 179 7 12 271 5 257 7.21e-13 70.1
MS.gene003456.t1 AT2G29910 26.038 265 179 7 12 271 5 257 7.21e-13 70.1
MS.gene003456.t1 AT1G26890 29.524 210 129 2 14 218 40 235 8.44e-13 70.5
MS.gene003456.t1 AT1G26890 30.806 211 125 4 14 218 40 235 9.14e-13 69.3
MS.gene003456.t1 AT1G26890 30.806 211 125 4 14 218 40 235 9.14e-13 69.3
MS.gene003456.t1 AT5G44490 26.482 253 155 7 8 242 13 252 1.17e-12 70.5
MS.gene003456.t1 AT5G44490 26.482 253 155 7 8 242 13 252 1.65e-12 69.7
MS.gene003456.t1 AT5G56370 27.089 347 217 11 12 355 2 315 3.12e-12 68.2
MS.gene003456.t1 AT5G03100 25.446 224 149 6 4 226 1 207 5.37e-12 67.0
MS.gene003456.t1 AT5G03100 25.446 224 149 6 4 226 1 207 5.37e-12 67.0
MS.gene003456.t1 AT5G56370 26.485 404 255 13 12 406 2 372 6.00e-12 67.8
MS.gene003456.t1 AT5G56370 26.485 404 255 13 12 406 2 372 6.00e-12 67.8
MS.gene003456.t1 AT1G61330 22.889 450 293 18 13 434 11 434 7.06e-12 67.8
MS.gene003456.t1 AT1G13570 24.537 432 276 13 10 430 4 396 1.29e-11 66.6
MS.gene003456.t1 AT1G13570 24.537 432 276 13 10 430 4 396 1.29e-11 66.6
MS.gene003456.t1 AT1G13570 25.532 235 164 7 10 242 4 229 1.33e-11 65.9
MS.gene003456.t1 AT4G10420 24.841 314 186 11 110 406 3 283 1.50e-11 65.9
MS.gene003456.t1 AT5G56810 27.074 229 146 8 10 228 13 230 1.59e-11 65.9
MS.gene003456.t1 AT5G56810 26.957 230 147 8 9 228 12 230 2.10e-11 66.2

Find 84 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTTCAATTTCCACATTAA+AGG 0.206236 4.3:-32611932 MS.gene003456:CDS
TTTCACAACAGAAGCTATTA+AGG 0.246340 4.3:+32612236 None:intergenic
GCAGCATATGGTTCACAAAT+AGG 0.254992 4.3:+32611739 None:intergenic
TCGAAAGATGAGAAACTATT+TGG 0.266037 4.3:+32612156 None:intergenic
CGCCCGCCACATCATGTCTT+TGG 0.276854 4.3:+32612547 None:intergenic
TTTCCAGTTTAGGAGTCTTT+AGG 0.278514 4.3:+32611363 None:intergenic
CCTCCACTTGTTTGCTAATA+CGG 0.298934 4.3:+32612446 None:intergenic
ACTACAGAGGTCAGGTTAAC+AGG 0.305488 4.3:+32611790 None:intergenic
CAAACAAGTGGAGGCACTTA+TGG 0.310885 4.3:-32612437 MS.gene003456:CDS
GGAAGTTCTTACAGCATCTT+TGG 0.316021 4.3:+32612467 None:intergenic
GGTAACACAAACTTATCATT+TGG 0.333830 4.3:+32612177 None:intergenic
ATGGTCAACTCTTGTAAAAC+AGG 0.333893 4.3:+32611991 None:intergenic
CTCCCAATCACAATCGTAAA+TGG 0.338696 4.3:+32611972 None:intergenic
ATCTGAAGACTTTCCAGTTT+AGG 0.339949 4.3:+32611353 None:intergenic
CAGAAACGACTAATTTCTTC+AGG 0.343491 4.3:+32612064 None:intergenic
TCTCCTAAAGACTCCTAAAC+TGG 0.365638 4.3:-32611366 MS.gene003456:CDS
TGACCATTTACGATTGTGAT+TGG 0.375080 4.3:-32611975 MS.gene003456:CDS
TTTCACTGATGAAGTACTAA+TGG 0.381867 4.3:-32611393 MS.gene003456:CDS
AGCATCTTTGGTAGGGAGTA+AGG 0.386627 4.3:+32612479 None:intergenic
TCATTGACCAAACTGTGTTT+AGG 0.394125 4.3:-32612132 MS.gene003456:CDS
AACTTGATGACACAACTCTC+TGG 0.400574 4.3:+32610976 None:intergenic
AGAGTTGTGTCATCAAGTTT+TGG 0.406463 4.3:-32610972 MS.gene003456:intron
CTGGGCCTACATCTTCCAAT+TGG 0.409999 4.3:+32610995 None:intergenic
ACATTTAAAAGTGTTGTTGA+TGG 0.411742 4.3:-32612273 MS.gene003456:CDS
CTTGAGTCCTAAACACAGTT+TGG 0.414655 4.3:+32612125 None:intergenic
TGATTAGGTACTTGACTACT+TGG 0.419041 4.3:-32611223 MS.gene003456:intron
CAGCATATGGTTCACAAATA+GGG 0.421631 4.3:+32611740 None:intergenic
GATTTGAAACAGCAAGGCAC+TGG 0.429593 4.3:+32611177 None:intergenic
GACCATTTACGATTGTGATT+GGG 0.440734 4.3:-32611974 MS.gene003456:CDS
TTAACAGGGATAATATCTAT+TGG 0.443705 4.3:+32611805 None:intergenic
CTTCCTGCTGCAGGTAAGAA+TGG 0.444612 4.3:-32609430 MS.gene003456:CDS
CTGGAAAGTCTTCAGATACC+TGG 0.449246 4.3:-32611347 MS.gene003456:CDS
TGTGTCAATTTGTGAAATCT+AGG 0.473639 4.3:+32611443 None:intergenic
GTTCTTACAGCATCTTTGGT+AGG 0.480673 4.3:+32612471 None:intergenic
TAGAGAAGGTGGATGATGTT+CGG 0.488207 4.3:-32611020 MS.gene003456:CDS
CACATCTTTATGTGTTTCGT+GGG 0.490448 4.3:-32611424 MS.gene003456:CDS
TTTCAGCTATTGAGTGGACT+TGG 0.495648 4.3:-32611706 MS.gene003456:CDS
TTCTTACAGCATCTTTGGTA+GGG 0.496479 4.3:+32612472 None:intergenic
AAAATCAAAGGCAGATAAGT+AGG 0.500764 4.3:+32612413 None:intergenic
GGATGATGTTCGGAACCAAT+TGG 0.501475 4.3:-32611010 MS.gene003456:CDS
TCTGCGGTGCTTCCTGCTGC+AGG 0.507012 4.3:-32609439 MS.gene003456:CDS
TTGAACAGTTTCAAAATCAA+AGG 0.508132 4.3:+32612401 None:intergenic
ACACATCTTTATGTGTTTCG+TGG 0.519038 4.3:-32611425 MS.gene003456:CDS
AATACACACTGAGCAGCATA+TGG 0.524125 4.3:+32611727 None:intergenic
ATCTCGCAACTAGATCTAAG+AGG 0.526833 4.3:+32612337 None:intergenic
ATGTATCAACTACAGAGGTC+AGG 0.533741 4.3:+32611782 None:intergenic
TGTCCATTCTTACCTGCAGC+AGG 0.534614 4.3:+32609427 None:intergenic
ATATGAAGAAGAACTTCCTC+AGG 0.535641 4.3:+32612507 None:intergenic
ATTACTGCACAAATCTAGTC+GGG 0.545715 4.3:-32612316 MS.gene003456:CDS
CTAGGAAAACGAATACCGTT+AGG 0.547272 4.3:+32612087 None:intergenic
GATGGAGAGCATCCTTTGTA+CGG 0.548823 4.3:+32611471 None:intergenic
GATGGTTAACTCCTTTAATG+TGG 0.549610 4.3:+32611921 None:intergenic
ACGACTAATTTCTTCAGGCT+AGG 0.552145 4.3:+32612069 None:intergenic
CAAGATCTTGAACTTTCACT+AGG 0.553456 4.3:-32612204 MS.gene003456:CDS
TGTGAAATCTAGGAAGGAGA+TGG 0.559010 4.3:+32611453 None:intergenic
ATCCAAAGACATGATGTGGC+GGG 0.561807 4.3:-32612549 MS.gene003456:CDS
TGGAAAGTCTTCAGATACCT+GGG 0.564430 4.3:-32611346 MS.gene003456:CDS
CTACAGAGGTCAGGTTAACA+GGG 0.566349 4.3:+32611791 None:intergenic
GGTAAGAATGGACATGCTCT+CGG 0.568244 4.3:-32609418 MS.gene003456:CDS
AAAATAAAACGTACCACCCC+AGG 0.568996 4.3:+32611329 None:intergenic
ACTTGATGACACAACTCTCT+GGG 0.572316 4.3:+32610977 None:intergenic
TGTGTATTTCAGCTATTGAG+TGG 0.574330 4.3:-32611712 MS.gene003456:CDS
TCAATTTGTGAAATCTAGGA+AGG 0.578890 4.3:+32611447 None:intergenic
AACTGACATCTCATCTGCAA+AGG 0.580887 4.3:+32612035 None:intergenic
TAAAATCCAAAGACATGATG+TGG 0.581453 4.3:-32612553 MS.gene003456:CDS
CGGAACCAATTGGAAGATGT+AGG 0.582296 4.3:-32611000 MS.gene003456:CDS
ATTTGAAACAGCAAGGCACT+GGG 0.586718 4.3:+32611178 None:intergenic
GATTACTGCACAAATCTAGT+CGG 0.590830 4.3:-32612317 MS.gene003456:CDS
ACTATATAATAATACTCTTG+AGG 0.601018 4.3:-32611665 MS.gene003456:intron
ATCAGCTGATATAGAGAAGG+TGG 0.601354 4.3:-32611031 MS.gene003456:CDS
AGAGAAGATTTGAAACAGCA+AGG 0.601972 4.3:+32611171 None:intergenic
CCGTATTAGCAAACAAGTGG+AGG 0.611955 4.3:-32612446 MS.gene003456:CDS
TTTATCAGCTGATATAGAGA+AGG 0.618952 4.3:-32611034 MS.gene003456:CDS
CTTCCGTATTAGCAAACAAG+TGG 0.621723 4.3:-32612449 MS.gene003456:CDS
ACTGTAATAGTCAAAATCGA+TGG 0.624529 4.3:+32611903 None:intergenic
CTAGTGTCTTTACCGTACAA+AGG 0.625332 4.3:-32611483 MS.gene003456:intron
AATCCAAAGACATGATGTGG+CGG 0.634648 4.3:-32612550 MS.gene003456:CDS
TTCACTCTACATATTCCTAA+CGG 0.643303 4.3:-32612102 MS.gene003456:CDS
TGGTCAACTCTTGTAAAACA+GGG 0.649076 4.3:+32611992 None:intergenic
GTGATTGGGAGAATTTAGAG+CGG 0.667154 4.3:-32611960 MS.gene003456:CDS
AATAGATGTATCAACTACAG+AGG 0.675392 4.3:+32611777 None:intergenic
CATGATTAGCGATTTACCTG+AGG 0.678654 4.3:-32612523 MS.gene003456:CDS
AAGTCTTCAGATACCTGGGG+TGG 0.698855 4.3:-32611342 MS.gene003456:intron
GGAAAGTCTTCAGATACCTG+GGG 0.702227 4.3:-32611345 MS.gene003456:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATGATTTATAAAATGTT+TGG - chr4.3:32611493-32611512 MS.gene003456:intron 10.0%
!! TATTATTATGATAAATTTGA+AGG + chr4.3:32612022-32612041 None:intergenic 10.0%
!!! TTATGCTTTTTAAATTTTTA+TGG - chr4.3:32610831-32610850 MS.gene003456:intron 10.0%
!! TAACTAATAAATTCATGTAA+AGG - chr4.3:32611693-32611712 MS.gene003456:CDS 15.0%
!! TTGATATAAAACATACATTA+AGG + chr4.3:32611905-32611924 None:intergenic 15.0%
!!! ACTGTATCAATTTATTTTAT+TGG - chr4.3:32611191-32611210 MS.gene003456:CDS 15.0%
!!! ATATTTACACTTTTCATAAT+AGG - chr4.3:32612424-32612443 MS.gene003456:CDS 15.0%
!! AAAATGTACTAAGTCTATAT+TGG - chr4.3:32611810-32611829 MS.gene003456:CDS 20.0%
!! AAAGAAAAATCAAAAGAACA+CGG - chr4.3:32609605-32609624 MS.gene003456:CDS 20.0%
!! AAATGTACTAAGTCTATATT+GGG - chr4.3:32611811-32611830 MS.gene003456:CDS 20.0%
!! AACATATTTAAACCATAGTT+AGG - chr4.3:32611432-32611451 MS.gene003456:CDS 20.0%
!! AACTATGGTTTAAATATGTT+GGG + chr4.3:32611432-32611451 None:intergenic 20.0%
!! AATAAACACAAAGAAAGAAA+TGG + chr4.3:32611050-32611069 None:intergenic 20.0%
!! ACTATATAATAATACTCTTG+AGG - chr4.3:32610307-32610326 MS.gene003456:intron 20.0%
!! GATTTATAAAATGTTTGGTT+GGG - chr4.3:32611498-32611517 MS.gene003456:intron 20.0%
!! TAACTATGGTTTAAATATGT+TGG + chr4.3:32611433-32611452 None:intergenic 20.0%
!! TCATTTAATCGCATATATTT+AGG + chr4.3:32611480-32611499 None:intergenic 20.0%
!! TGATTTATAAAATGTTTGGT+TGG - chr4.3:32611497-32611516 MS.gene003456:intron 20.0%
!!! AAGTTCTAGATTCTTTTTAA+CGG + chr4.3:32611315-32611334 None:intergenic 20.0%
!!! ATATTTTTAGTATGTGAAGT+AGG - chr4.3:32612048-32612067 MS.gene003456:CDS 20.0%
!!! TCTTTCTTTGTGTTTATTTT+TGG - chr4.3:32611052-32611071 MS.gene003456:CDS 20.0%
!!! TTTCATCTTACTATGAATTT+TGG - chr4.3:32611359-32611378 MS.gene003456:CDS 20.0%
! AAATCTGAAAGAACTAATCT+AGG + chr4.3:32612105-32612124 None:intergenic 25.0%
! AAATTGATACAGTTCACAAA+GGG + chr4.3:32611184-32611203 None:intergenic 25.0%
! AACATTGTCATTAGGTATTA+TGG + chr4.3:32610393-32610412 None:intergenic 25.0%
! ATAATACCTAATGACAATGT+TGG - chr4.3:32610392-32610411 MS.gene003456:intron 25.0%
! ATAATAGGATAATTTCTCAC+TGG - chr4.3:32612439-32612458 MS.gene003456:CDS 25.0%
! ATGTTTAGTGATTCTTGATT+AGG - chr4.3:32610734-32610753 MS.gene003456:intron 25.0%
! CATTCCATAATATAAATGTG+TGG - chr4.3:32611102-32611121 MS.gene003456:CDS 25.0%
! TAAATTGATACAGTTCACAA+AGG + chr4.3:32611185-32611204 None:intergenic 25.0%
! TCAACCACACATTTATATTA+TGG + chr4.3:32611109-32611128 None:intergenic 25.0%
! TGTTTCAATTTCCACATTAA+AGG - chr4.3:32610040-32610059 MS.gene003456:intron 25.0%
! TTAAAAAATGCCCCATATTT+GGG - chr4.3:32610888-32610907 MS.gene003456:intron 25.0%
! TTAACAGGGATAATATCTAT+TGG + chr4.3:32610170-32610189 None:intergenic 25.0%
! TTGAACAGTTTCAAAATCAA+AGG + chr4.3:32609574-32609593 None:intergenic 25.0%
!! CACTTTTAAATGTTTGAACA+CGG + chr4.3:32609692-32609711 None:intergenic 25.0%
!! TAGATTAGTTCTTTCAGATT+TGG - chr4.3:32612104-32612123 MS.gene003456:CDS 25.0%
!!! AAACTTTAATGTTGACTTGA+TGG - chr4.3:32611857-32611876 MS.gene003456:CDS 25.0%
!!! ACATTTAAAAGTGTTGTTGA+TGG - chr4.3:32609699-32609718 MS.gene003456:intron 25.0%
!!! ACTTTTCTTTTGATTTGACT+TGG - chr4.3:32612192-32612211 MS.gene003456:CDS 25.0%
!!! CTTTTCTTTTGATTTGACTT+GGG - chr4.3:32612193-32612212 MS.gene003456:CDS 25.0%
!!! TACTATGAATTTTGGAAAAC+TGG - chr4.3:32611367-32611386 MS.gene003456:CDS 25.0%
AAAATCAAAGGCAGATAAGT+AGG + chr4.3:32609562-32609581 None:intergenic 30.0%
AACAACTCTAAACACTTAGA+CGG + chr4.3:32611244-32611263 None:intergenic 30.0%
AATAGATGTATCAACTACAG+AGG + chr4.3:32610198-32610217 None:intergenic 30.0%
AATGGAAACAAAATCACGTT+AGG + chr4.3:32610468-32610487 None:intergenic 30.0%
ACTGTAATAGTCAAAATCGA+TGG + chr4.3:32610072-32610091 None:intergenic 30.0%
CAACAATGAAAAGCAAAAGA+CGG + chr4.3:32612239-32612258 None:intergenic 30.0%
CTGGTAATTGTCATATTTCA+AGG - chr4.3:32610677-32610696 MS.gene003456:intron 30.0%
CTTAAAAAATGCCCCATATT+TGG - chr4.3:32610887-32610906 MS.gene003456:intron 30.0%
GGTAACACAAACTTATCATT+TGG + chr4.3:32609798-32609817 None:intergenic 30.0%
TAAAAAATGCCCCATATTTG+GGG - chr4.3:32610889-32610908 MS.gene003456:intron 30.0%
TAAAATCCAAAGACATGATG+TGG - chr4.3:32609419-32609438 MS.gene003456:CDS 30.0%
TAGATGTTGGAACACTTAAA+CGG - chr4.3:32611606-32611625 MS.gene003456:intron 30.0%
TCAATTTGTGAAATCTAGGA+AGG + chr4.3:32610528-32610547 None:intergenic 30.0%
TCGAAAGATGAGAAACTATT+TGG + chr4.3:32609819-32609838 None:intergenic 30.0%
TGACATACCAAAACATAACA+CGG - chr4.3:32611282-32611301 MS.gene003456:intron 30.0%
TGTGTCAATTTGTGAAATCT+AGG + chr4.3:32610532-32610551 None:intergenic 30.0%
TTAAAGCCAACATTGTCATT+AGG + chr4.3:32610401-32610420 None:intergenic 30.0%
TTCACTCTACATATTCCTAA+CGG - chr4.3:32609870-32609889 MS.gene003456:intron 30.0%
TTTATCAGCTGATATAGAGA+AGG - chr4.3:32610938-32610957 MS.gene003456:intron 30.0%
TTTCACAACAGAAGCTATTA+AGG + chr4.3:32609739-32609758 None:intergenic 30.0%
! TTTCACTGATGAAGTACTAA+TGG - chr4.3:32610579-32610598 MS.gene003456:intron 30.0%
!! TCTTTTGCTTTTCATTGTTG+CGG - chr4.3:32612239-32612258 MS.gene003456:CDS 30.0%
AAAAAATGCCCCATATTTGG+GGG - chr4.3:32610890-32610909 MS.gene003456:intron 35.0%
AAATGTTTGGTTGGGTCTTT+AGG - chr4.3:32611506-32611525 MS.gene003456:intron 35.0%
AATATGACAATTACCAGCAC+TGG + chr4.3:32610674-32610693 None:intergenic 35.0%
ACACATCTTTATGTGTTTCG+TGG - chr4.3:32610547-32610566 MS.gene003456:intron 35.0%
AGAGATACACACTTAAACGT+GGG - chr4.3:32611632-32611651 MS.gene003456:intron 35.0%
AGATGTGTGTGTGATTATAG+AGG - chr4.3:32612281-32612300 MS.gene003456:CDS 35.0%
ATATGAAGAAGAACTTCCTC+AGG + chr4.3:32609468-32609487 None:intergenic 35.0%
ATCTGAAGACTTTCCAGTTT+AGG + chr4.3:32610622-32610641 None:intergenic 35.0%
ATGGTCAACTCTTGTAAAAC+AGG + chr4.3:32609984-32610003 None:intergenic 35.0%
ATGTGTGTGTGATTATAGAG+GGG - chr4.3:32612283-32612302 MS.gene003456:CDS 35.0%
ATTACTGCACAAATCTAGTC+GGG - chr4.3:32609656-32609675 MS.gene003456:intron 35.0%
CAAGATCTTGAACTTTCACT+AGG - chr4.3:32609768-32609787 MS.gene003456:intron 35.0%
CACATCTTTATGTGTTTCGT+GGG - chr4.3:32610548-32610567 MS.gene003456:intron 35.0%
CACTCAATCATACCTAACTA+TGG + chr4.3:32611447-32611466 None:intergenic 35.0%
CAGAAACGACTAATTTCTTC+AGG + chr4.3:32609911-32609930 None:intergenic 35.0%
CAGCATATGGTTCACAAATA+GGG + chr4.3:32610235-32610254 None:intergenic 35.0%
GACCATTTACGATTGTGATT+GGG - chr4.3:32609998-32610017 MS.gene003456:intron 35.0%
GATGGTTAACTCCTTTAATG+TGG + chr4.3:32610054-32610073 None:intergenic 35.0%
GATGTGTGTGTGATTATAGA+GGG - chr4.3:32612282-32612301 MS.gene003456:CDS 35.0%
GATTACTGCACAAATCTAGT+CGG - chr4.3:32609655-32609674 MS.gene003456:intron 35.0%
GTGTTCCAACATCTAAGTAT+TGG + chr4.3:32611601-32611620 None:intergenic 35.0%
TACGGTAAAGACACTAGTAA+TGG + chr4.3:32610486-32610505 None:intergenic 35.0%
TCATTGACCAAACTGTGTTT+AGG - chr4.3:32609840-32609859 MS.gene003456:intron 35.0%
TGACCATTTACGATTGTGAT+TGG - chr4.3:32609997-32610016 MS.gene003456:intron 35.0%
TGATTAGGTACTTGACTACT+TGG - chr4.3:32610749-32610768 MS.gene003456:intron 35.0%
TGGTCAACTCTTGTAAAACA+GGG + chr4.3:32609983-32610002 None:intergenic 35.0%
TGTGTATTTCAGCTATTGAG+TGG - chr4.3:32610260-32610279 MS.gene003456:intron 35.0%
TTCTTACAGCATCTTTGGTA+GGG + chr4.3:32609503-32609522 None:intergenic 35.0%
TTGTCTTTCAAACTTCAGCT+AGG - chr4.3:32611333-32611352 MS.gene003456:intron 35.0%
TTTCATTGTTGCGGACATAT+GGG - chr4.3:32612248-32612267 MS.gene003456:CDS 35.0%
TTTCCAGTTTAGGAGTCTTT+AGG + chr4.3:32610612-32610631 None:intergenic 35.0%
TTTGGCCAATACTTAGATGT+TGG - chr4.3:32611593-32611612 MS.gene003456:intron 35.0%
! AGAGAAGATTTGAAACAGCA+AGG + chr4.3:32610804-32610823 None:intergenic 35.0%
! AGAGTTGTGTCATCAAGTTT+TGG - chr4.3:32611000-32611019 MS.gene003456:CDS 35.0%
! GTCAGTTCAACAACTTTTCT+CGG - chr4.3:32609953-32609972 MS.gene003456:intron 35.0%
! TCAGTTCAACAACTTTTCTC+GGG - chr4.3:32609954-32609973 MS.gene003456:intron 35.0%
! TGACTACTATCGCTAGTTTA+TGG - chr4.3:32611152-32611171 MS.gene003456:CDS 35.0%
! TTTTCATTGTTGCGGACATA+TGG - chr4.3:32612247-32612266 MS.gene003456:CDS 35.0%
!! TAACTTTTGCTGTGGTTTTC+AGG - chr4.3:32612502-32612521 MS.gene003456:CDS 35.0%
!! TTTATTTTCTTCACCAGTGC+TGG - chr4.3:32610658-32610677 MS.gene003456:intron 35.0%
!! TTTTCAGGCTTCAAATTCTG+CGG - chr4.3:32612517-32612536 MS.gene003456:CDS 35.0%
AAAATAAAACGTACCACCCC+AGG + chr4.3:32610646-32610665 None:intergenic 40.0%
AACTGACATCTCATCTGCAA+AGG + chr4.3:32609940-32609959 None:intergenic 40.0%
AATACACACTGAGCAGCATA+TGG + chr4.3:32610248-32610267 None:intergenic 40.0%
AATCCAAAGACATGATGTGG+CGG - chr4.3:32609422-32609441 MS.gene003456:CDS 40.0%
ACGACTAATTTCTTCAGGCT+AGG + chr4.3:32609906-32609925 None:intergenic 40.0%
ATCAGCTGATATAGAGAAGG+TGG - chr4.3:32610941-32610960 MS.gene003456:intron 40.0%
ATCTCGCAACTAGATCTAAG+AGG + chr4.3:32609638-32609657 None:intergenic 40.0%
ATCTTGATCTCCCCCAAATA+TGG + chr4.3:32610903-32610922 None:intergenic 40.0%
ATGTATCAACTACAGAGGTC+AGG + chr4.3:32610193-32610212 None:intergenic 40.0%
ATTGGACAAACTCTGTTTGC+TGG - chr4.3:32611209-32611228 MS.gene003456:CDS 40.0%
CATGAAGATGACGAGCAAAT+AGG + chr4.3:32610341-32610360 None:intergenic 40.0%
CATGATTAGCGATTTACCTG+AGG - chr4.3:32609449-32609468 MS.gene003456:CDS 40.0%
CCAAAACATAACACGGTCTT+TGG - chr4.3:32611289-32611308 MS.gene003456:intron 40.0%
CTAGGAAAACGAATACCGTT+AGG + chr4.3:32609888-32609907 None:intergenic 40.0%
CTAGTGTCTTTACCGTACAA+AGG - chr4.3:32610489-32610508 MS.gene003456:intron 40.0%
CTCCCAATCACAATCGTAAA+TGG + chr4.3:32610003-32610022 None:intergenic 40.0%
CTTCCGTATTAGCAAACAAG+TGG - chr4.3:32609523-32609542 MS.gene003456:intron 40.0%
CTTGAGTCCTAAACACAGTT+TGG + chr4.3:32609850-32609869 None:intergenic 40.0%
GAGAGATACACACTTAAACG+TGG - chr4.3:32611631-32611650 MS.gene003456:intron 40.0%
GCAGCATATGGTTCACAAAT+AGG + chr4.3:32610236-32610255 None:intergenic 40.0%
GCTAACCGACTATTTGAACT+CGG + chr4.3:32611764-32611783 None:intergenic 40.0%
GCTATCCGAGTTCAAATAGT+CGG - chr4.3:32611756-32611775 MS.gene003456:CDS 40.0%
GGAAGTTCTTACAGCATCTT+TGG + chr4.3:32609508-32609527 None:intergenic 40.0%
GTGATTGGGAGAATTTAGAG+CGG - chr4.3:32610012-32610031 MS.gene003456:intron 40.0%
GTTAGGTATGATTGAGTGCT+CGG - chr4.3:32611449-32611468 MS.gene003456:CDS 40.0%
GTTCTTACAGCATCTTTGGT+AGG + chr4.3:32609504-32609523 None:intergenic 40.0%
TAGAGAAGGTGGATGATGTT+CGG - chr4.3:32610952-32610971 MS.gene003456:intron 40.0%
TCTCCTAAAGACTCCTAAAC+TGG - chr4.3:32610606-32610625 MS.gene003456:intron 40.0%
TCTTGATCTCCCCCAAATAT+GGG + chr4.3:32610902-32610921 None:intergenic 40.0%
TCTTTCAAACTTCAGCTAGG+TGG - chr4.3:32611336-32611355 MS.gene003456:intron 40.0%
TGAAAAGCAAAAGACGGTTG+AGG + chr4.3:32612233-32612252 None:intergenic 40.0%
TGCTTATGATCTCAAGCAAG+TGG + chr4.3:32611837-32611856 None:intergenic 40.0%
TGGAAAGTCTTCAGATACCT+GGG - chr4.3:32610626-32610645 MS.gene003456:intron 40.0%
TGTGAAATCTAGGAAGGAGA+TGG + chr4.3:32610522-32610541 None:intergenic 40.0%
TTCATTGTTGCGGACATATG+GGG - chr4.3:32612249-32612268 MS.gene003456:CDS 40.0%
TTGGACAAACTCTGTTTGCT+GGG - chr4.3:32611210-32611229 MS.gene003456:CDS 40.0%
! AAACTCTGTTTGCTGGGAAT+TGG - chr4.3:32611216-32611235 MS.gene003456:CDS 40.0%
! AACTTGATGACACAACTCTC+TGG + chr4.3:32610999-32611018 None:intergenic 40.0%
! ACATAGTGGAGAGGAAACTT+AGG - chr4.3:32611545-32611564 MS.gene003456:intron 40.0%
! ACTTGATGACACAACTCTCT+GGG + chr4.3:32610998-32611017 None:intergenic 40.0%
! ATTTGAAACAGCAAGGCACT+GGG + chr4.3:32610797-32610816 None:intergenic 40.0%
! CAGTTCAACAACTTTTCTCG+GGG - chr4.3:32609955-32609974 MS.gene003456:intron 40.0%
! CCAAAGACCGTGTTATGTTT+TGG + chr4.3:32611292-32611311 None:intergenic 40.0%
! CCTCCACTTGTTTGCTAATA+CGG + chr4.3:32609529-32609548 None:intergenic 40.0%
! GGTAATGCAAGTTGAACTTG+AGG - chr4.3:32611714-32611733 MS.gene003456:CDS 40.0%
! GTGTTTGGAACAAGTTTCAC+AGG - chr4.3:32612147-32612166 MS.gene003456:CDS 40.0%
! TTTCAGCTATTGAGTGGACT+TGG - chr4.3:32610266-32610285 MS.gene003456:intron 40.0%
!! GCTTTAAGATACAGGGTGTT+TGG - chr4.3:32612132-32612151 MS.gene003456:CDS 40.0%
!! GGTTGCTGCTTTAAGATACA+GGG - chr4.3:32612125-32612144 MS.gene003456:CDS 40.0%
!! TGGTTGCTGCTTTAAGATAC+AGG - chr4.3:32612124-32612143 MS.gene003456:CDS 40.0%
ACACTTTCCACACAGGAACT+GGG + chr4.3:32611659-32611678 None:intergenic 45.0%
ACTACAGAGGTCAGGTTAAC+AGG + chr4.3:32610185-32610204 None:intergenic 45.0%
AGCATCTTTGGTAGGGAGTA+AGG + chr4.3:32609496-32609515 None:intergenic 45.0%
AGTATGCTTAAGCGTGGCTT+TGG - chr4.3:32611575-32611594 MS.gene003456:intron 45.0%
ATCCAAAGACATGATGTGGC+GGG - chr4.3:32609423-32609442 MS.gene003456:CDS 45.0%
ATGTCATAGTGTGCGAGCTT+AGG + chr4.3:32611409-32611428 None:intergenic 45.0%
CCACAGCAAAAGTTAGACCA+AGG + chr4.3:32612497-32612516 None:intergenic 45.0%
CCGTATTAGCAAACAAGTGG+AGG - chr4.3:32609526-32609545 MS.gene003456:intron 45.0%
CGGAACCAATTGGAAGATGT+AGG - chr4.3:32610972-32610991 MS.gene003456:intron 45.0%
CTACAGAGGTCAGGTTAACA+GGG + chr4.3:32610184-32610203 None:intergenic 45.0%
CTGGAAAGTCTTCAGATACC+TGG - chr4.3:32610625-32610644 MS.gene003456:intron 45.0%
CTTGATCTCCCCCAAATATG+GGG + chr4.3:32610901-32610920 None:intergenic 45.0%
GGAAAGTCTTCAGATACCTG+GGG - chr4.3:32610627-32610646 MS.gene003456:intron 45.0%
GGATGATGTTCGGAACCAAT+TGG - chr4.3:32610962-32610981 MS.gene003456:intron 45.0%
GGTAAGAATGGACATGCTCT+CGG - chr4.3:32612554-32612573 MS.gene003456:CDS 45.0%
GTGGAACACATTGAATGCCT+TGG - chr4.3:32612477-32612496 MS.gene003456:CDS 45.0%
TCATTGTTGCGGACATATGG+GGG - chr4.3:32612250-32612269 MS.gene003456:CDS 45.0%
TGTCATAGTGTGCGAGCTTA+GGG + chr4.3:32611408-32611427 None:intergenic 45.0%
TTCAGCAGTATGCTTAAGCG+TGG - chr4.3:32611569-32611588 MS.gene003456:intron 45.0%
! AGTTCCTGTGTGGAAAGTGT+GGG - chr4.3:32611659-32611678 MS.gene003456:intron 45.0%
! CCTTGGTCTAACTTTTGCTG+TGG - chr4.3:32612494-32612513 MS.gene003456:CDS 45.0%
! CTGGCTGTTTCATTGTTACG+TGG - chr4.3:32612458-32612477 MS.gene003456:CDS 45.0%
! GATTTGAAACAGCAAGGCAC+TGG + chr4.3:32610798-32610817 None:intergenic 45.0%
!! CAAACAAGTGGAGGCACTTA+TGG - chr4.3:32609535-32609554 MS.gene003456:intron 45.0%
!! CTTTAGGATCGTGTGGAGTA+TGG - chr4.3:32611522-32611541 MS.gene003456:intron 45.0%
!! GATGGAGAGCATCCTTTGTA+CGG + chr4.3:32610504-32610523 None:intergenic 45.0%
AAGTCTTCAGATACCTGGGG+TGG - chr4.3:32610630-32610649 MS.gene003456:intron 50.0%
ATAGTGTGCGAGCTTAGGGT+GGG + chr4.3:32611404-32611423 None:intergenic 50.0%
CACACTTTCCACACAGGAAC+TGG + chr4.3:32611660-32611679 None:intergenic 50.0%
CAGTTCCTGTGTGGAAAGTG+TGG - chr4.3:32611658-32611677 MS.gene003456:intron 50.0%
CATTGTTGCGGACATATGGG+GGG - chr4.3:32612251-32612270 MS.gene003456:CDS 50.0%
CGTGTGGAGTATGGACATAG+TGG - chr4.3:32611531-32611550 MS.gene003456:intron 50.0%
CTGGGCCTACATCTTCCAAT+TGG + chr4.3:32610980-32610999 None:intergenic 50.0%
CTTCCTGCTGCAGGTAAGAA+TGG - chr4.3:32612542-32612561 MS.gene003456:CDS 50.0%
TGTCCATTCTTACCTGCAGC+AGG + chr4.3:32612548-32612567 None:intergenic 50.0%
! GGAGTATGGACATAGTGGAG+AGG - chr4.3:32611536-32611555 MS.gene003456:intron 50.0%
!! GTTGGGTCTTTAGGATCGTG+TGG - chr4.3:32611515-32611534 MS.gene003456:intron 50.0%
ACCTCCCACACTTTCCACAC+AGG + chr4.3:32611666-32611685 None:intergenic 55.0%
CATAGTGTGCGAGCTTAGGG+TGG + chr4.3:32611405-32611424 None:intergenic 55.0%
TAGTGTGCGAGCTTAGGGTG+GGG + chr4.3:32611403-32611422 None:intergenic 55.0%
TGCGGACATATGGGGGGATT+TGG - chr4.3:32612257-32612276 MS.gene003456:CDS 55.0%
! TCCTGTGTGGAAAGTGTGGG+AGG - chr4.3:32611662-32611681 MS.gene003456:intron 55.0%
AGTGTGCGAGCTTAGGGTGG+GGG + chr4.3:32611402-32611421 None:intergenic 60.0%
CGCCCGCCACATCATGTCTT+TGG + chr4.3:32609428-32609447 None:intergenic 60.0%
CGTGGGTCCCAGTTCCTGTG+TGG - chr4.3:32611649-32611668 MS.gene003456:intron 65.0%
TCTGCGGTGCTTCCTGCTGC+AGG - chr4.3:32612533-32612552 MS.gene003456:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 32609414 32612580 32609414 ID=MS.gene003456
chr4.3 mRNA 32609414 32612580 32609414 ID=MS.gene003456.t1;Parent=MS.gene003456
chr4.3 exon 32611666 32612580 32611666 ID=MS.gene003456.t1.exon1;Parent=MS.gene003456.t1
chr4.3 CDS 32611666 32612580 32611666 ID=cds.MS.gene003456.t1;Parent=MS.gene003456.t1
chr4.3 exon 32611343 32611501 32611343 ID=MS.gene003456.t1.exon2;Parent=MS.gene003456.t1
chr4.3 CDS 32611343 32611501 32611343 ID=cds.MS.gene003456.t1;Parent=MS.gene003456.t1
chr4.3 exon 32610973 32611238 32610973 ID=MS.gene003456.t1.exon3;Parent=MS.gene003456.t1
chr4.3 CDS 32610973 32611238 32610973 ID=cds.MS.gene003456.t1;Parent=MS.gene003456.t1
chr4.3 exon 32609580 32609625 32609580 ID=MS.gene003456.t1.exon4;Parent=MS.gene003456.t1
chr4.3 CDS 32609580 32609625 32609580 ID=cds.MS.gene003456.t1;Parent=MS.gene003456.t1
chr4.3 exon 32609414 32609470 32609414 ID=MS.gene003456.t1.exon5;Parent=MS.gene003456.t1
chr4.3 CDS 32609414 32609470 32609414 ID=cds.MS.gene003456.t1;Parent=MS.gene003456.t1
Gene Sequence

>MS.gene003456

ATGCATAAAATCCAAAGACATGATGTGGCGGGCGACATGATTAGCGATTTACCTGAGGAAGTTCTTCTTCATATTCTTTCCTTACTCCCTACCAAAGATGCTGTAAGAACTTCCGTATTAGCAAACAAGTGGAGGCACTTATGGACCTACTTATCTGCCTTTGATTTTGAAACTGTTCAATATGACTCAAAAAAGAAAAATCAAAAGAACACGGCAAATTGCCTCTTAGATCTAGTTGCGAGATTACTGCACAAATCTAGTCGGGTAGAAAAACTCCGTGTTCAAACATTTAAAAGTGTTGTTGATGGTGACAAAGTTAGTTCCTTAATAGCTTCTGTTGTGAAACACAAAGTACAAGATCTTGAACTTTCACTAGGTGATCCAAATGATAAGTTTGTGTTACCAAATAGTTTCTCATCTTTCGAGTCATTGACCAAACTGTGTTTAGGACTCAAGTTCACTCTACATATTCCTAACGGTATTCGTTTTCCTAGCCTGAAGAAATTAGTCGTTTCTGAAGTTACCTTTGCAGATGAGATGTCAGTTCAACAACTTTTCTCGGGGTGCCCTGTTTTACAAGAGTTGACCATTTACGATTGTGATTGGGAGAATTTAGAGCGGATCACTGTTTCAATTTCCACATTAAAGGAGTTAACCATCGATTTTGACTATTACAGTGTTGATTATGATCATCATATGAAACTCATGATTGATGCTGTGAATCTTTTATCGTTAAGTTGCACATGCAGTCAACCAATAGATATTATCCCTGTTAACCTGACCTCTGTAGTTGATACATCTATTGATTTTGAGTATCACCCTATTTGTGAACCATATGCTGCTCAGTGTGTATTTCAGCTATTGAGTGGACTTGGTAGTGTTCAGTCTCTCACACTATATAATAATACTCTTGAGGTATGTTTGCCTATTTGCTCGTCATCTTCATGTTTTTTTTTTTTTTTTTAAATATTGTATACCATAATACCTAATGACAATGTTGGCTTTAATTATTCGTTTCTTGTAATCATTGCATATTTTCTGAATCGCAGTACCTAACGTGATTTTGTTTCCATTACTAGTGTCTTTACCGTACAAAGGATGCTCTCCATCTCCTTCCTAGATTTCACAAATTGACACATCTTTATGTGTTTCGTGGGAGTTTCGATTTCACTGATGAAGTACTAATGGAAATTCTCCTAAAGACTCCTAAACTGGAAAGTCTTCAGATACCTGGGGTGGTACGTTTTATTTTCTTCACCAGTGCTGGTAATTGTCATATTTCAAGGCTAACAATCTTGAGAATCACTTCTGTTAATTGACATGTTTAGTGATTCTTGATTAGGTACTTGACTACTTGGATGATGAAGATTTGATATTGAACCCAGTGCCTTGCTGTTTCAAATCTTCTCTCAATCGATTATGCTTTTTAAATTTTTATGGAAATGAAGATGAAATTGAATTCGTTATGTTTATCTTAAAAAATGCCCCATATTTGGGGGAGATCAAGATATACTGTTCGAGACATTTATCAGCTGATATAGAGAAGGTGGATGATGTTCGGAACCAATTGGAAGATGTAGGCCCAGAGAGTTGTGTCATCAAGTTTTGGTAAATAATCTTTCTTTTCTTCTCTCCATTTCTTTCTTTGTGTTTATTTTTGGAATTGAATCAGTTTACTAATTTAACTTCATTCCATAATATAAATGTGTGGTTGATGAAATAAATAGCTTCACTAGTATGACTACTATCGCTAGTTTATGGAGTATGCCCTTTGTGAACTGTATCAATTTATTTTATTGGACAAACTCTGTTTGCTGGGAATTGGAACCGTCTAAGTGTTTAGAGTTGTTGTTCTTACTTTTTACACTTGACATACCAAAACATAACACGGTCTTTGGCCGTTAAAAAGAATCTAGAACTTGTCTTTCAAACTTCAGCTAGGTGGTTTCATCTTACTATGAATTTTGGAAAACTGGTTCATTGTACCCCCACCCTAAGCTCGCACACTATGACATCCCAACATATTTAAACCATAGTTAGGTATGATTGAGTGCTCGGTGAAGCCTAAATATATGCGATTAAATGATTTATAAAATGTTTGGTTGGGTCTTTAGGATCGTGTGGAGTATGGACATAGTGGAGAGGAAACTTAGGTTTCAGCAGTATGCTTAAGCGTGGCTTTGGCCAATACTTAGATGTTGGAACACTTAAACGGCAGAGAGATACACACTTAAACGTGGGTCCCAGTTCCTGTGTGGAAAGTGTGGGAGGTTTGATTATAACTAATAAATTCATGTAAAGGTAATGCAAGTTGAACTTGAGGTAATGTATTAGTTGTTTTAGCTATCCGAGTTCAAATAGTCGGTTAGCTAGTACTTCAAAATTATTTATTCTTCAAAATGTACTAAGTCTATATTGGGCCACTTGCTTGAGATCATAAGCAAAACTTTAATGTTGACTTGATGGACATGAAAGCTAATTCAAAATTCCTTAATGTATGTTTTATATCAAGTATCATCATAATCTCTTAAAGCTCTTTTTAAGTAATATCACTACTTTTTTATTTCTTAAAACTAGAGACTTTTGTACTATTTTCTTTGTGTTACCTTCAAATTTATCATAATAATAATAATAATATTTTTAGTATGTGAAGTAGGTTTTTATACTATGATCTTTTCAAGATATGAGCCTAGATTAGTTCTTTCAGATTTGGTTGCTGCTTTAAGATACAGGGTGTTTGGAACAAGTTTCACAGGAATAAGAACTGTTTAAATTTCAACTTTTCTTTTGATTTGACTTGGGAATGATTCGTTTTGCCTCAACCGTCTTTTGCTTTTCATTGTTGCGGACATATGGGGGGATTTGGAAGATGTGTGTGTGATTATAGAGGGGTTTGAGATCTTCATTCTGAAAGTATATTGATCTGCTAACTGTTATTTGTTTTCACTGTTTCAGTTACAGCTACTATGAACAATCTGACGATGAATCTGATGAAGATGAAGTGAGTAAAATATTTACACTTTTCATAATAGGATAATTTCTCACTGGCTGTTTCATTGTTACGTGGAACACATTGAATGCCTTGGTCTAACTTTTGCTGTGGTTTTCAGGCTTCAAATTCTGCGGTGCTTCCTGCTGCAGGTAAGAATGGACATGCTCTCGGCTGA

Protein sequence

>MS.gene003456.t1

MHKIQRHDVAGDMISDLPEEVLLHILSLLPTKDAVRTSVLANKWRHLWTYLSAFDFETVQYDSKKKNQKNTANCLLDLVARLLHKSSRVEKLRVQTFKSVVDGDKVSSLIASVVKHKVQDLELSLGDPNDKFVLPNSFSSFESLTKLCLGLKFTLHIPNGIRFPSLKKLVVSEVTFADEMSVQQLFSGCPVLQELTIYDCDWENLERITVSISTLKELTIDFDYYSVDYDHHMKLMIDAVNLLSLSCTCSQPIDIIPVNLTSVVDTSIDFEYHPICEPYAAQCVFQLLSGLGSVQSLTLYNNTLECLYRTKDALHLLPRFHKLTHLYVFRGSFDFTDEVLMEILLKTPKLESLQIPGVVLDYLDDEDLILNPVPCCFKSSLNRLCFLNFYGNEDEIEFVMFILKNAPYLGEIKIYCSRHLSADIEKVDDVRNQLEDVGPESCVIKFCYSYYEQSDDESDEDEASNSAVLPAAGKNGHALG