AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045452


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045452.t1 MTR_4g080590 95.395 456 21 0 1 456 1 456 0.0 885
MS.gene045452.t1 MTR_4g080590 95.028 362 18 0 1 362 1 362 0.0 696
MS.gene045452.t1 MTR_3g048290 47.660 470 231 7 1 456 1 469 3.84e-125 372
MS.gene045452.t1 MTR_4g080787 46.218 476 228 8 1 456 1 468 2.13e-123 368
MS.gene045452.t1 MTR_4g130200 47.345 452 170 7 1 448 1 388 1.28e-116 347
MS.gene045452.t1 MTR_4g080773 44.563 469 235 8 1 449 1 464 1.01e-113 343
MS.gene045452.t1 MTR_4g080773 44.563 469 235 8 1 449 1 464 2.10e-113 343
MS.gene045452.t1 MTR_5g039950 44.880 459 207 6 1 452 1 420 1.33e-107 325
MS.gene045452.t1 MTR_7g023310 44.828 464 233 11 1 450 1 455 8.48e-103 314
MS.gene045452.t1 MTR_5g039970 54.630 324 137 4 5 319 1 323 1.75e-99 301
MS.gene045452.t1 MTR_7g023330 40.175 458 199 10 6 452 3 396 2.62e-88 275
MS.gene045452.t1 MTR_7g039630 44.054 370 165 6 1 360 1 338 4.64e-77 244
MS.gene045452.t1 MTR_4g080807 42.179 358 168 5 90 443 1 323 7.75e-71 230
MS.gene045452.t1 MTR_2g094750 44.624 372 170 14 21 358 88 457 8.67e-69 227
MS.gene045452.t1 MTR_4g081030 37.302 378 210 9 8 371 2 366 5.19e-54 185
MS.gene045452.t1 MTR_5g005690 27.983 461 270 12 9 419 3 451 8.90e-33 130
MS.gene045452.t1 MTR_2g072530 26.316 437 306 11 15 442 5 434 1.14e-27 115
MS.gene045452.t1 MTR_5g080710 28.132 423 279 13 6 420 16 421 2.06e-26 111
MS.gene045452.t1 MTR_8g467800 28.571 427 258 15 20 419 17 423 1.29e-24 106
MS.gene045452.t1 MTR_4g045900 23.313 489 303 16 23 446 26 507 1.39e-24 106
MS.gene045452.t1 MTR_8g062270 28.412 447 272 17 20 435 13 442 4.61e-23 101
MS.gene045452.t1 MTR_2g007450 25.850 441 221 14 23 420 16 393 1.73e-22 99.8
MS.gene045452.t1 MTR_1g082260 41.667 144 81 1 73 213 23 166 1.88e-22 94.7
MS.gene045452.t1 MTR_5g084070 26.747 415 273 12 14 420 4 395 2.26e-22 99.4
MS.gene045452.t1 MTR_7g094030 27.990 418 273 14 22 421 27 434 2.23e-21 96.7
MS.gene045452.t1 MTR_2g005990 26.067 445 236 18 18 433 1 381 2.26e-21 95.9
MS.gene045452.t1 MTR_4g080813 58.333 72 30 0 5 76 1 72 4.54e-21 88.2
MS.gene045452.t1 MTR_4g032845 26.077 441 290 17 21 439 1 427 8.29e-21 94.7
MS.gene045452.t1 MTR_2g082850 27.684 354 226 15 22 356 21 363 2.15e-20 92.8
MS.gene045452.t1 MTR_2g007500 28.792 389 200 19 19 396 10 332 7.07e-20 90.9
MS.gene045452.t1 MTR_7g098510 24.714 437 237 15 7 425 2 364 9.13e-20 91.3
MS.gene045452.t1 MTR_2g072720 24.894 470 311 16 1 445 16 468 1.71e-19 91.3
MS.gene045452.t1 MTR_6g022500 25.527 427 226 14 17 424 95 448 9.28e-19 89.0
MS.gene045452.t1 MTR_7g056433 24.027 437 240 13 14 430 3 367 2.09e-18 87.0
MS.gene045452.t1 MTR_1g090883 28.000 375 232 11 5 360 1 356 6.50e-18 85.5
MS.gene045452.t1 MTR_7g075820 25.231 432 229 17 18 420 1 367 1.03e-17 85.1
MS.gene045452.t1 MTR_4g032730 22.796 465 304 15 20 444 12 461 1.54e-17 85.1
MS.gene045452.t1 MTR_3g107120 24.582 419 231 12 23 419 9 364 4.54e-17 83.2
MS.gene045452.t1 MTR_2g082800 26.316 418 255 19 11 406 14 400 4.75e-17 83.2
MS.gene045452.t1 MTR_5g073420 23.419 427 245 13 23 439 11 365 6.44e-17 82.8
MS.gene045452.t1 MTR_8g058965 27.252 433 267 16 19 420 9 424 7.54e-17 83.2
MS.gene045452.t1 MTR_8g468840 26.651 424 271 17 21 419 12 420 9.87e-17 82.4
MS.gene045452.t1 MTR_3g107100 24.272 412 237 12 20 419 8 356 1.85e-16 81.6
MS.gene045452.t1 MTR_7g088260 25.874 429 221 17 22 430 90 441 1.93e-16 81.6
MS.gene045452.t1 MTR_3g108150 25.532 423 232 17 22 430 12 365 3.89e-16 80.5
MS.gene045452.t1 MTR_2g082880 24.350 423 275 14 19 421 6 403 1.44e-15 79.0
MS.gene045452.t1 MTR_7g098480 25.355 422 239 16 7 419 2 356 3.09e-15 78.2
MS.gene045452.t1 MTR_8g467800 30.370 270 164 12 20 275 17 276 3.52e-15 77.0
MS.gene045452.t1 MTR_3g448340 26.846 447 261 20 18 419 1 426 3.90e-15 77.8
MS.gene045452.t1 MTR_1g038760 27.397 365 225 14 11 356 2 345 4.23e-15 77.0
MS.gene045452.t1 MTR_1g038760 27.397 365 225 14 11 356 2 345 6.16e-15 76.3
MS.gene045452.t1 MTR_3g108560 24.057 424 240 14 18 430 15 367 7.34e-15 76.3
MS.gene045452.t1 MTR_3g107160 30.882 204 104 6 20 202 7 194 8.56e-15 76.3
MS.gene045452.t1 MTR_6g022360 27.163 416 213 16 20 422 40 378 1.07e-14 76.3
MS.gene045452.t1 MTR_2g072730 24.775 444 284 16 1 418 1 420 1.96e-14 75.5
MS.gene045452.t1 MTR_8g066650 27.744 328 220 9 16 335 73 391 1.97e-14 75.5
MS.gene045452.t1 MTR_6g018660 24.403 377 226 13 12 353 9 361 4.30e-14 73.9
MS.gene045452.t1 MTR_8g445780 26.866 402 257 14 19 404 9 389 1.57e-13 72.4
MS.gene045452.t1 MTR_1g038710 25.761 427 271 18 23 420 19 428 1.62e-13 72.8
MS.gene045452.t1 MTR_5g038430 29.412 221 144 8 14 226 87 303 2.46e-13 72.4
MS.gene045452.t1 MTR_0049s0110 25.592 422 256 17 23 424 8 391 2.48e-13 72.0
MS.gene045452.t1 MTR_3g036320 27.410 332 208 10 22 335 19 335 3.64e-13 71.2
MS.gene045452.t1 MTR_2g091145 25.935 428 256 17 23 424 21 413 4.15e-13 71.2
MS.gene045452.t1 MTR_8g469020 25.858 437 261 17 23 420 7 419 4.70e-13 71.2
MS.gene045452.t1 MTR_3g023470 27.247 356 235 11 14 357 6 349 5.59e-13 70.5
MS.gene045452.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 6.82e-13 69.3
MS.gene045452.t1 MTR_7g055943 23.624 436 256 14 6 427 24 396 8.34e-13 70.5
MS.gene045452.t1 MTR_8g014160 25.476 420 234 20 18 419 35 393 9.39e-13 70.1
MS.gene045452.t1 MTR_6g088700 27.964 329 213 12 22 338 13 329 1.42e-12 69.3
MS.gene045452.t1 MTR_5g092960 25.751 466 280 18 20 444 16 456 1.97e-12 69.3
MS.gene045452.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 2.03e-12 68.6
MS.gene045452.t1 MTR_6g025160 25.391 256 171 7 13 259 91 335 2.31e-12 68.6
MS.gene045452.t1 MTR_3g110010 30.939 181 122 3 22 202 12 189 2.48e-12 69.7
MS.gene045452.t1 MTR_0049s0110 30.435 207 133 7 23 224 8 208 2.49e-12 68.2
MS.gene045452.t1 MTR_8g014260 26.386 451 285 17 5 430 1 429 2.62e-12 68.9
MS.gene045452.t1 MTR_3g109982 30.939 181 122 3 22 202 12 189 3.69e-12 68.9
MS.gene045452.t1 MTR_5g087940 24.332 337 206 11 19 336 22 328 5.89e-12 67.8
MS.gene045452.t1 MTR_1g011410 24.925 333 214 11 23 347 7 311 7.06e-12 68.2
MS.gene045452.t1 MTR_4g056030 24.714 437 285 19 20 431 6 423 7.90e-12 67.4
MS.gene045452.t1 MTR_2g047848 25.472 424 250 17 23 417 7 393 8.75e-12 67.0
MS.gene045452.t1 MTR_7g026500 34.074 135 78 6 307 435 251 380 1.10e-11 66.6
MS.gene045452.t1 MTR_1g011430 29.437 231 141 9 23 239 7 229 1.18e-11 66.6
MS.gene045452.t1 MTR_7g084080 29.600 250 158 10 19 257 13 255 1.33e-11 65.5
MS.gene045452.t1 MTR_1g013630 30.244 205 121 10 18 206 33 231 1.54e-11 66.2
MS.gene045452.t1 MTR_8g017280 27.488 211 118 8 22 208 35 234 1.68e-11 65.5
MS.gene045452.t1 MTR_3g036250 28.342 187 123 5 23 202 5 187 1.72e-11 65.9
MS.gene045452.t1 MTR_3g023330 26.974 304 203 9 22 314 14 309 1.88e-11 65.9
MS.gene045452.t1 MTR_1g021825 32.569 218 120 10 23 226 17 221 2.23e-11 65.9
MS.gene045452.t1 MTR_1g021825 32.569 218 120 10 23 226 88 292 2.30e-11 66.2
MS.gene045452.t1 MTR_1g021820 25.905 359 212 16 23 364 28 349 2.50e-11 65.9
MS.gene045452.t1 MTR_8g017280 28.000 175 101 6 22 182 35 198 3.15e-11 65.5
MS.gene045452.t1 MTR_7g025650 25.067 375 233 12 22 358 18 382 3.18e-11 65.9
MS.gene045452.t1 MTR_1g014450 28.390 236 142 12 18 234 10 237 4.08e-11 65.1
MS.gene045452.t1 MTR_0227s0010 30.918 207 118 10 14 205 6 202 5.28e-11 64.3
MS.gene045452.t1 MTR_3g108560 27.128 188 124 4 18 202 15 192 5.78e-11 63.9
MS.gene045452.t1 MTR_4g056020 23.148 432 292 16 23 431 9 423 7.09e-11 64.3
MS.gene045452.t1 MTR_5g083890 30.455 220 124 7 18 212 1 216 7.38e-11 64.7
MS.gene045452.t1 MTR_8g018340 24.691 324 209 12 18 311 1 319 9.72e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045452.t1 AT4G14096 28.571 462 287 16 18 451 3 449 9.08e-34 132
MS.gene045452.t1 AT4G14096 28.571 462 287 16 18 451 3 449 9.08e-34 132
MS.gene045452.t1 AT3G59210 30.022 463 263 17 22 442 6 449 1.40e-31 126
MS.gene045452.t1 AT3G59210 30.022 463 263 17 22 442 6 449 1.40e-31 126
MS.gene045452.t1 AT3G59210 30.022 463 263 17 22 442 6 449 1.40e-31 126
MS.gene045452.t1 AT3G59210 30.022 463 263 17 22 442 6 449 1.40e-31 126
MS.gene045452.t1 AT3G59210 30.022 463 263 17 22 442 6 449 1.40e-31 126
MS.gene045452.t1 AT4G14103 29.917 361 230 11 18 362 3 356 1.51e-31 125
MS.gene045452.t1 AT4G14103 29.917 361 230 11 18 362 3 356 1.51e-31 125
MS.gene045452.t1 AT4G14103 27.753 454 276 16 18 451 3 424 2.11e-31 125
MS.gene045452.t1 AT3G58880 29.425 435 255 17 21 420 1 418 9.20e-31 124
MS.gene045452.t1 AT1G78840 29.524 420 254 14 22 419 4 403 8.77e-30 120
MS.gene045452.t1 AT1G78840 29.524 420 254 14 22 419 4 403 8.77e-30 120
MS.gene045452.t1 AT3G58860 28.825 451 288 15 23 452 7 445 1.27e-29 120
MS.gene045452.t1 AT3G58900 29.345 443 248 18 23 420 2 424 2.93e-28 117
MS.gene045452.t1 AT5G53840 27.934 426 288 12 22 442 17 428 1.49e-27 114
MS.gene045452.t1 AT4G13965 26.835 436 281 15 23 447 10 418 3.37e-27 113
MS.gene045452.t1 AT1G51370 28.810 420 264 17 22 430 18 413 4.09e-27 113
MS.gene045452.t1 AT5G44950 26.651 424 264 13 22 419 3 405 5.38e-27 113
MS.gene045452.t1 AT3G03030 27.626 438 274 15 23 424 2 432 2.68e-26 111
MS.gene045452.t1 AT3G59240 27.703 444 281 15 22 434 7 441 7.81e-26 110
MS.gene045452.t1 AT5G38590 26.398 447 269 16 23 447 2 410 1.67e-25 108
MS.gene045452.t1 AT3G59230 27.837 467 287 18 22 447 11 468 4.77e-25 107
MS.gene045452.t1 AT3G59200 26.609 466 273 17 22 435 6 454 5.71e-25 107
MS.gene045452.t1 AT1G66300 25.806 434 276 16 23 434 29 438 1.39e-24 106
MS.gene045452.t1 AT1G32375 26.585 410 267 11 23 419 2 390 1.44e-24 105
MS.gene045452.t1 AT1G32375 26.585 410 267 11 23 419 2 390 1.44e-24 105
MS.gene045452.t1 AT3G59170 29.231 455 248 20 22 420 6 442 1.53e-24 106
MS.gene045452.t1 AT4G22280 28.864 440 275 15 23 452 2 413 1.62e-24 105
MS.gene045452.t1 AT1G58310 29.894 378 222 11 22 362 7 378 2.10e-24 106
MS.gene045452.t1 AT1G66290 25.653 421 289 13 19 429 25 431 8.28e-24 103
MS.gene045452.t1 AT5G56420 25.428 409 278 11 18 419 1 389 8.76e-24 103
MS.gene045452.t1 AT5G56420 25.428 409 278 11 18 419 1 389 8.76e-24 103
MS.gene045452.t1 AT5G56420 25.428 409 278 11 18 419 1 389 8.76e-24 103
MS.gene045452.t1 AT1G55030 25.728 412 254 15 23 416 9 386 1.16e-23 103
MS.gene045452.t1 AT3G50710 26.281 449 275 17 23 446 2 419 1.16e-23 103
MS.gene045452.t1 AT1G55030 25.791 411 253 15 23 415 19 395 1.18e-23 103
MS.gene045452.t1 AT4G22280 31.609 348 209 11 23 360 2 330 1.29e-23 101
MS.gene045452.t1 AT3G59200 27.174 368 225 12 22 358 6 361 2.60e-23 101
MS.gene045452.t1 AT1G13780 24.145 468 295 17 23 452 10 455 5.96e-23 101
MS.gene045452.t1 AT4G10400 26.424 439 279 15 23 450 2 407 6.55e-23 100
MS.gene045452.t1 AT4G10400 26.424 439 279 15 23 450 2 407 6.55e-23 100
MS.gene045452.t1 AT4G10400 26.424 439 279 15 23 450 2 407 6.55e-23 100
MS.gene045452.t1 AT2G42730 26.637 443 291 14 20 437 2 435 7.24e-23 101
MS.gene045452.t1 AT3G03040 27.126 435 267 16 23 420 2 423 1.15e-22 100
MS.gene045452.t1 AT3G59160 29.262 393 215 16 22 362 12 393 1.29e-22 100
MS.gene045452.t1 AT5G22720 27.635 427 260 14 22 417 22 430 1.34e-22 100
MS.gene045452.t1 AT3G49030 25.676 444 287 18 19 446 17 433 1.89e-22 99.8
MS.gene045452.t1 AT5G53635 27.818 417 266 11 24 419 1 403 1.99e-22 99.8
MS.gene045452.t1 AT1G51370 28.989 376 235 15 22 387 18 371 2.15e-22 99.4
MS.gene045452.t1 AT3G58980 28.027 446 265 18 23 432 2 427 5.08e-22 99.4
MS.gene045452.t1 AT1G78750 25.778 450 304 14 23 451 18 458 8.60e-22 97.8
MS.gene045452.t1 AT1G78750 25.778 450 304 14 23 451 18 458 8.60e-22 97.8
MS.gene045452.t1 AT1G16930 25.059 423 277 13 23 419 15 423 9.47e-22 97.8
MS.gene045452.t1 AT1G16930 25.059 423 277 13 23 419 15 423 9.47e-22 97.8
MS.gene045452.t1 AT1G16930 25.059 423 277 13 23 419 15 423 9.47e-22 97.8
MS.gene045452.t1 AT1G51370 29.310 348 220 13 22 365 18 343 1.02e-21 96.3
MS.gene045452.t1 AT5G56440 27.536 414 265 11 23 419 2 397 1.56e-21 97.1
MS.gene045452.t1 AT5G22670 26.988 415 272 13 22 419 10 410 1.79e-21 97.1
MS.gene045452.t1 AT3G59250 28.846 416 245 15 22 420 6 387 2.66e-21 96.3
MS.gene045452.t1 AT5G25860 26.279 430 261 14 22 419 11 416 2.81e-21 96.3
MS.gene045452.t1 AT5G41840 29.921 381 218 18 23 362 14 386 3.77e-21 96.7
MS.gene045452.t1 AT3G59000 26.941 438 266 15 23 420 2 425 5.26e-21 95.9
MS.gene045452.t1 AT2G29930 28.306 431 256 21 22 419 11 421 5.36e-21 95.5
MS.gene045452.t1 AT2G29930 28.306 431 256 21 22 419 11 421 5.36e-21 95.5
MS.gene045452.t1 AT1G06630 28.531 354 225 12 22 360 11 351 5.85e-21 94.4
MS.gene045452.t1 AT1G06630 28.531 354 225 12 22 360 11 351 5.85e-21 94.4
MS.gene045452.t1 AT1G06630 28.531 354 225 12 22 360 11 351 1.13e-20 94.0
MS.gene045452.t1 AT1G06630 28.531 354 225 12 22 360 11 351 1.13e-20 94.0
MS.gene045452.t1 AT1G06630 28.531 354 225 12 22 360 11 351 1.13e-20 94.0
MS.gene045452.t1 AT1G06630 28.531 354 225 12 22 360 11 351 1.13e-20 94.0
MS.gene045452.t1 AT5G38590 29.323 266 167 7 23 278 2 256 1.29e-20 92.0
MS.gene045452.t1 AT3G58960 26.503 449 266 18 23 420 2 437 1.33e-20 94.7
MS.gene045452.t1 AT1G06630 28.531 354 225 12 22 360 20 360 1.82e-20 93.6
MS.gene045452.t1 AT5G44980 23.185 427 302 11 22 432 3 419 1.96e-20 93.6
MS.gene045452.t1 AT5G44980 23.185 427 302 11 22 432 3 419 1.96e-20 93.6
MS.gene045452.t1 AT1G06630 28.531 354 225 12 22 360 11 351 2.09e-20 94.0
MS.gene045452.t1 AT3G44060 24.598 435 305 11 28 452 4 425 2.63e-20 93.2
MS.gene045452.t1 AT3G28410 25.069 363 234 14 12 361 19 356 2.71e-20 93.6
MS.gene045452.t1 AT5G22730 24.408 422 294 10 16 420 22 435 2.75e-20 93.6
MS.gene045452.t1 AT5G22730 24.408 422 294 10 16 420 22 435 2.75e-20 93.6
MS.gene045452.t1 AT3G60040 25.785 446 289 15 22 444 231 657 3.52e-20 94.0
MS.gene045452.t1 AT3G60040 25.785 446 289 15 22 444 229 655 3.77e-20 94.0
MS.gene045452.t1 AT1G66310 26.877 413 274 14 20 419 16 413 4.34e-20 92.8
MS.gene045452.t1 AT3G60040 25.785 446 289 15 22 444 12 438 4.72e-20 93.6
MS.gene045452.t1 AT3G60040 25.785 446 289 15 22 444 231 657 4.84e-20 93.6
MS.gene045452.t1 AT3G60040 25.785 446 289 15 22 444 232 658 5.03e-20 93.6
MS.gene045452.t1 AT3G26922 27.626 257 175 6 22 273 13 263 6.55e-20 90.5
MS.gene045452.t1 AT3G26922 27.626 257 175 6 22 273 13 263 6.55e-20 90.5
MS.gene045452.t1 AT1G69630 26.107 429 286 14 9 419 4 419 7.13e-20 92.0
MS.gene045452.t1 AT5G56390 27.338 417 242 18 41 430 21 403 9.32e-20 91.7
MS.gene045452.t1 AT4G00315 31.381 239 146 7 23 253 2 230 1.06e-19 91.7
MS.gene045452.t1 AT5G56400 24.887 442 299 11 23 452 33 453 1.62e-19 91.3
MS.gene045452.t1 AT5G27750 22.426 437 292 13 23 424 5 429 2.55e-19 90.5
MS.gene045452.t1 AT5G22660 26.077 418 274 11 22 419 12 414 4.32e-19 89.7
MS.gene045452.t1 AT5G50270 26.366 421 258 14 23 419 2 394 5.03e-19 89.4
MS.gene045452.t1 AT3G58900 29.969 327 180 14 23 314 2 314 5.24e-19 87.8
MS.gene045452.t1 AT5G02930 26.761 355 227 14 23 361 28 365 6.20e-19 89.4
MS.gene045452.t1 AT5G56810 25.056 447 287 14 23 451 15 431 9.47e-19 88.6
MS.gene045452.t1 AT3G58900 29.846 325 179 14 23 312 2 312 1.42e-18 87.0
MS.gene045452.t1 AT3G58900 29.846 325 179 14 23 312 2 312 1.42e-18 87.0
MS.gene045452.t1 AT5G44960 22.565 421 262 11 23 419 5 385 1.55e-18 87.8
MS.gene045452.t1 AT1G55660 26.107 429 275 15 18 420 48 460 1.74e-18 88.2
MS.gene045452.t1 AT5G02700 25.978 358 232 14 11 358 17 351 1.85e-18 87.8
MS.gene045452.t1 AT3G59190 27.764 407 248 14 22 400 11 399 1.89e-18 88.2
MS.gene045452.t1 AT4G10420 27.517 298 175 11 135 419 22 291 2.48e-18 86.3
MS.gene045452.t1 AT3G62440 24.945 457 294 13 23 441 2 447 3.69e-18 87.0
MS.gene045452.t1 AT4G00160 25.167 449 297 13 15 446 8 434 3.93e-18 87.0
MS.gene045452.t1 AT2G26030 22.967 418 284 15 23 417 4 406 4.03e-18 86.7
MS.gene045452.t1 AT2G26030 22.967 418 284 15 23 417 4 406 4.03e-18 86.7
MS.gene045452.t1 AT4G13985 24.942 429 296 11 19 428 15 436 7.56e-18 86.3
MS.gene045452.t1 AT3G58930 26.637 443 270 16 23 420 2 434 8.10e-18 86.3
MS.gene045452.t1 AT3G58930 26.637 443 270 16 23 420 2 434 8.10e-18 86.3
MS.gene045452.t1 AT3G58930 26.637 443 270 16 23 420 2 434 8.10e-18 86.3
MS.gene045452.t1 AT3G52680 26.292 445 284 17 15 442 13 430 8.94e-18 85.9
MS.gene045452.t1 AT5G35995 26.695 472 283 19 22 452 4 453 9.49e-18 85.9
MS.gene045452.t1 AT5G35995 26.695 472 283 19 22 452 4 453 9.49e-18 85.9
MS.gene045452.t1 AT5G56380 25.223 448 286 16 23 444 2 426 1.00e-17 85.5
MS.gene045452.t1 AT5G56380 25.223 448 286 16 23 444 2 426 1.00e-17 85.5
MS.gene045452.t1 AT5G18780 26.988 415 266 13 22 417 10 406 1.24e-17 85.5
MS.gene045452.t1 AT5G18780 26.988 415 266 13 22 417 10 406 1.24e-17 85.5
MS.gene045452.t1 AT2G26030 22.673 419 289 15 23 417 4 411 1.25e-17 85.5
MS.gene045452.t1 AT5G56410 26.366 421 255 17 32 419 12 410 1.27e-17 85.5
MS.gene045452.t1 AT4G13960 26.977 430 267 16 23 420 2 416 1.32e-17 85.5
MS.gene045452.t1 AT4G13960 26.977 430 267 16 23 420 2 416 1.32e-17 85.5
MS.gene045452.t1 AT3G59190 28.767 365 224 13 22 358 11 367 1.61e-17 84.7
MS.gene045452.t1 AT1G78760 23.326 433 286 13 22 432 15 423 2.54e-17 84.3
MS.gene045452.t1 AT5G60610 26.214 412 262 15 23 419 2 386 3.27e-17 83.6
MS.gene045452.t1 AT5G60610 26.214 412 262 15 23 419 2 386 3.27e-17 83.6
MS.gene045452.t1 AT5G38396 25.169 445 269 16 23 423 2 426 4.25e-17 84.0
MS.gene045452.t1 AT2G26860 25.180 417 270 13 23 419 2 396 4.30e-17 83.6
MS.gene045452.t1 AT2G26860 25.180 417 270 13 23 419 2 396 4.30e-17 83.6
MS.gene045452.t1 AT1G66320 24.413 426 288 14 27 435 34 442 5.12e-17 83.6
MS.gene045452.t1 AT3G59150 27.483 433 274 12 23 420 13 440 5.97e-17 83.6
MS.gene045452.t1 AT3G62430 28.146 437 272 15 23 435 2 420 6.30e-17 83.2
MS.gene045452.t1 AT3G58920 26.164 451 263 18 23 419 2 436 7.21e-17 83.2
MS.gene045452.t1 AT4G26340 25.000 440 275 17 23 443 2 405 7.32e-17 82.8
MS.gene045452.t1 AT2G04230 24.945 453 296 15 14 444 3 433 7.95e-17 82.8
MS.gene045452.t1 AT3G26930 25.362 414 267 14 22 417 20 409 8.62e-17 82.8
MS.gene045452.t1 AT2G42720 25.909 440 268 16 23 426 2 419 8.82e-17 82.8
MS.gene045452.t1 AT5G56810 27.203 261 172 6 23 273 15 267 9.44e-17 81.3
MS.gene045452.t1 AT3G49030 24.270 445 266 18 19 446 17 407 9.50e-17 82.4
MS.gene045452.t1 AT5G41830 25.558 403 242 16 22 384 12 396 9.51e-17 82.8
MS.gene045452.t1 AT1G55660 30.415 217 141 6 18 226 48 262 9.72e-17 82.0
MS.gene045452.t1 AT5G56370 25.926 405 248 15 23 410 2 371 1.27e-16 82.0
MS.gene045452.t1 AT5G56370 25.926 405 248 15 23 410 2 371 1.27e-16 82.0
MS.gene045452.t1 AT4G15060 27.297 370 214 15 17 342 18 376 4.80e-16 80.5
MS.gene045452.t1 AT5G56690 25.185 405 249 15 25 402 4 381 6.06e-16 79.7
MS.gene045452.t1 AT3G49480 26.037 434 276 15 22 431 11 423 7.44e-16 80.1
MS.gene045452.t1 AT4G00320 26.546 388 229 17 22 370 12 382 7.66e-16 80.1
MS.gene045452.t1 AT4G09920 29.577 213 138 6 23 228 2 209 9.91e-16 77.8
MS.gene045452.t1 AT4G09920 29.577 213 138 6 23 228 2 209 9.91e-16 77.8
MS.gene045452.t1 AT4G09920 29.577 213 138 6 23 228 2 209 9.91e-16 77.8
MS.gene045452.t1 AT5G56820 22.273 440 290 13 23 446 15 418 1.46e-15 79.0
MS.gene045452.t1 AT3G03030 26.562 320 212 10 23 323 2 317 1.51e-15 78.2
MS.gene045452.t1 AT1G60400 27.027 333 200 12 23 334 14 324 1.69e-15 78.6
MS.gene045452.t1 AT4G09920 29.577 213 138 6 23 228 2 209 1.81e-15 77.4
MS.gene045452.t1 AT4G09920 29.577 213 138 6 23 228 2 209 1.81e-15 77.4
MS.gene045452.t1 AT4G27050 26.273 373 223 16 23 362 4 357 1.83e-15 79.0
MS.gene045452.t1 AT4G27050 26.273 373 223 16 23 362 4 357 1.83e-15 79.0
MS.gene045452.t1 AT4G27050 26.273 373 223 16 23 362 4 357 1.83e-15 79.0
MS.gene045452.t1 AT4G27050 26.273 373 223 16 23 362 4 357 1.83e-15 79.0
MS.gene045452.t1 AT4G27050 26.273 373 223 16 23 362 4 357 1.83e-15 79.0
MS.gene045452.t1 AT3G44810 27.619 315 210 8 28 330 12 320 1.94e-15 78.6
MS.gene045452.t1 AT5G02920 29.502 261 160 11 10 263 15 258 3.19e-15 75.9
MS.gene045452.t1 AT3G52680 26.891 357 223 13 15 360 13 342 3.22e-15 77.4
MS.gene045452.t1 AT1G06630 27.715 267 173 9 22 275 11 270 3.77e-15 76.3
MS.gene045452.t1 AT5G56370 26.361 349 211 12 23 360 2 315 4.00e-15 76.6
MS.gene045452.t1 AT3G58930 26.279 430 254 15 23 420 2 400 4.61e-15 77.4
MS.gene045452.t1 AT3G58930 26.279 430 254 15 23 420 2 400 4.61e-15 77.4
MS.gene045452.t1 AT5G38390 24.362 431 272 14 23 420 2 411 1.21e-14 76.3
MS.gene045452.t1 AT1G52650 24.942 429 278 14 23 420 2 417 1.58e-14 75.9
MS.gene045452.t1 AT3G58940 26.107 429 257 16 23 419 2 402 1.82e-14 76.3
MS.gene045452.t1 AT3G58940 26.107 429 257 16 23 419 2 402 1.82e-14 76.3
MS.gene045452.t1 AT1G13780 25.448 279 172 10 23 277 10 276 2.01e-14 74.7
MS.gene045452.t1 AT4G03220 22.917 480 301 18 23 446 24 490 2.59e-14 75.5
MS.gene045452.t1 AT3G51530 26.147 436 281 18 22 442 29 438 2.62e-14 75.1
MS.gene045452.t1 AT3G42770 25.728 412 271 16 28 423 4 396 3.85e-14 75.1
MS.gene045452.t1 AT3G49040 25.095 263 175 8 22 273 16 267 4.16e-14 73.6
MS.gene045452.t1 AT3G59180 25.698 358 212 14 109 420 66 415 4.47e-14 74.7
MS.gene045452.t1 AT3G26922 25.105 239 168 6 40 273 2 234 1.15e-13 71.6
MS.gene045452.t1 AT3G26922 25.105 239 168 6 40 273 2 234 1.15e-13 71.6
MS.gene045452.t1 AT5G27750 22.554 368 239 12 23 356 5 360 1.34e-13 72.4
MS.gene045452.t1 AT2G29910 28.731 268 162 11 22 275 4 256 1.39e-13 72.4
MS.gene045452.t1 AT2G29910 28.731 268 162 11 22 275 4 256 1.39e-13 72.4
MS.gene045452.t1 AT2G29910 28.731 268 162 11 22 275 4 256 1.39e-13 72.4
MS.gene045452.t1 AT2G29910 28.731 268 162 11 22 275 4 256 1.39e-13 72.4
MS.gene045452.t1 AT1G16940 24.873 197 131 5 23 213 11 196 1.45e-13 72.8
MS.gene045452.t1 AT2G29910 28.731 268 162 11 22 275 4 256 1.56e-13 72.0
MS.gene045452.t1 AT2G29910 28.731 268 162 11 22 275 4 256 1.56e-13 72.0
MS.gene045452.t1 AT2G29910 28.261 276 169 11 14 275 20 280 1.58e-13 72.4
MS.gene045452.t1 AT3G49150 25.316 474 274 21 22 446 15 457 2.26e-13 72.4
MS.gene045452.t1 AT5G22700 24.038 416 295 10 14 416 34 441 3.20e-13 72.0
MS.gene045452.t1 AT3G54160 28.457 376 224 18 84 432 48 405 3.47e-13 71.6
MS.gene045452.t1 AT3G49020 24.289 457 291 17 9 443 8 431 3.60e-13 71.6
MS.gene045452.t1 AT5G41630 25.627 359 206 14 22 336 11 352 3.72e-13 71.6
MS.gene045452.t1 AT3G26930 23.773 387 253 14 49 417 2 364 4.20e-13 71.2
MS.gene045452.t1 AT5G02910 26.705 352 228 14 20 361 8 339 7.42e-13 70.1
MS.gene045452.t1 AT5G22700 24.029 412 292 10 18 416 1 404 1.30e-12 69.7
MS.gene045452.t1 AT5G22700 24.029 412 292 10 18 416 1 404 1.30e-12 69.7
MS.gene045452.t1 AT5G22700 24.029 412 292 10 18 416 1 404 1.30e-12 69.7
MS.gene045452.t1 AT5G22700 24.029 412 292 10 18 416 1 404 1.30e-12 69.7
MS.gene045452.t1 AT5G62970 25.055 451 267 17 36 441 16 440 1.32e-12 69.7
MS.gene045452.t1 AT4G15060 28.767 219 148 6 23 234 172 389 1.34e-12 70.1
MS.gene045452.t1 AT5G02910 26.705 352 228 14 20 361 8 339 1.48e-12 69.3
MS.gene045452.t1 AT3G26920 24.601 313 202 11 116 416 15 305 1.64e-12 68.9
MS.gene045452.t1 AT3G26920 24.601 313 202 11 116 416 15 305 1.64e-12 68.9
MS.gene045452.t1 AT5G44970 24.422 303 206 9 130 418 58 351 1.78e-12 69.3
MS.gene045452.t1 AT1G80470 26.209 393 231 17 23 387 15 376 1.89e-12 69.3
MS.gene045452.t1 AT2G29930 27.687 307 177 16 145 419 8 301 1.97e-12 68.6
MS.gene045452.t1 AT5G02910 26.705 352 228 14 20 361 8 339 2.33e-12 69.3
MS.gene045452.t1 AT5G44490 24.299 428 292 13 22 429 16 431 3.62e-12 68.6
MS.gene045452.t1 AT5G44490 24.299 428 292 13 22 429 16 431 4.05e-12 68.6
MS.gene045452.t1 AT1G13570 31.336 217 127 9 18 224 1 205 6.97e-12 66.6
MS.gene045452.t1 AT5G22610 23.864 440 268 19 21 417 16 431 9.57e-12 67.4
MS.gene045452.t1 AT1G22000 33.333 180 113 4 25 203 31 204 1.15e-11 67.0
MS.gene045452.t1 AT3G10750 32.278 158 92 6 50 202 2 149 1.48e-11 65.5
MS.gene045452.t1 AT5G22610 24.065 428 252 18 21 417 16 401 2.40e-11 65.9
MS.gene045452.t1 AT1G13570 30.736 231 131 10 18 231 1 219 2.46e-11 65.9
MS.gene045452.t1 AT1G13570 30.736 231 131 10 18 231 1 219 2.46e-11 65.9
MS.gene045452.t1 AT5G18780 25.281 356 231 11 22 360 10 347 2.92e-11 65.5
MS.gene045452.t1 AT5G18780 25.281 356 231 11 22 360 10 347 2.92e-11 65.5
MS.gene045452.t1 AT5G22730 23.611 360 250 10 16 358 22 373 3.50e-11 65.1
MS.gene045452.t1 AT5G22660 25.564 266 181 5 22 277 12 270 3.60e-11 64.7
MS.gene045452.t1 AT3G54910 25.086 291 179 9 140 419 80 342 9.09e-11 63.9
MS.gene045452.t1 AT3G54910 25.086 291 179 9 140 419 80 342 9.09e-11 63.9
MS.gene045452.t1 AT3G54910 25.086 291 179 9 140 419 80 342 9.09e-11 63.9
MS.gene045452.t1 AT5G50270 28.638 213 133 9 23 224 2 206 9.86e-11 63.2

Find 80 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAATTTCTTGACATTTA+TGG 0.106011 4.2:+29450887 MS.gene045452:CDS
CAACATGCAGTTCGTTATTT+TGG 0.110661 4.2:-29450043 None:intergenic
ACTAAGTTGGATATAGTATT+TGG 0.170742 4.2:+29449657 MS.gene045452:CDS
GAAAATCAAAGACGGGTAAT+TGG 0.233443 4.2:-29449383 None:intergenic
TAGAATTTCTTGACATTTAT+GGG 0.257267 4.2:+29450888 MS.gene045452:CDS
TATCGGCCATATGATATCTT+TGG 0.291452 4.2:-29449242 None:intergenic
AAACTTCACCAATCTGATTT+CGG 0.294077 4.2:-29451119 None:intergenic
GTTGATGCATATATTGATCT+TGG 0.309181 4.2:+29450008 MS.gene045452:CDS
TAGAAAATGTCACGTTCTTA+AGG 0.323129 4.2:+29451146 MS.gene045452:CDS
ATGTCAAGAAATTCTAGTTT+AGG 0.324682 4.2:-29450881 None:intergenic
GCTATCAGATGAAACTATTC+AGG 0.345809 4.2:+29450118 MS.gene045452:CDS
CCGGGATGCCGAGAAACTAT+TGG 0.361036 4.2:-29449628 None:intergenic
CCTGTATCAACAATAGTTGA+TGG 0.364163 4.2:-29449513 None:intergenic
CCATCAACTATTGTTGATAC+AGG 0.366559 4.2:+29449513 MS.gene045452:CDS
ATTCTAGTTTAGGACTCTTT+CGG 0.366674 4.2:-29450871 None:intergenic
TTAGGGATCTTACTTATCCT+TGG 0.372669 4.2:+29451006 MS.gene045452:intron
ATCAATATATGCATCAACTA+TGG 0.376573 4.2:-29450003 None:intergenic
ACAAGGAAACAATTTATAGT+TGG 0.386110 4.2:-29449969 None:intergenic
CAAGGAAACAATTTATAGTT+GGG 0.388932 4.2:-29449968 None:intergenic
ATTTCGAACATACAACTGTT+AGG 0.395712 4.2:-29449906 None:intergenic
CGTGTTACCCAATAGTTTCT+CGG 0.406753 4.2:+29449620 MS.gene045452:CDS
AGGAACCAATTGCAAGCTTT+AGG 0.419691 4.2:+29451229 MS.gene045452:CDS
TTGATGCATATATTGATCTT+GGG 0.427037 4.2:+29450009 MS.gene045452:CDS
CGGGATGCCGAGAAACTATT+GGG 0.428862 4.2:-29449627 None:intergenic
AAAATCAAAGACGGGTAATT+GGG 0.435838 4.2:-29449382 None:intergenic
CCATGCCTAAAGCTTGCAAT+TGG 0.438162 4.2:-29451234 None:intergenic
GCTAATCATATCTTTCATAT+CGG 0.446725 4.2:-29449259 None:intergenic
AAAGATAATATCTTCAAGCT+AGG 0.454542 4.2:-29449714 None:intergenic
AGAAAATGTCACGTTCTTAA+GGG 0.467231 4.2:+29451147 MS.gene045452:CDS
GGTGACTTAGAATTTCGCTT+TGG 0.469597 4.2:-29449417 None:intergenic
TAAGCTCCAAAGATATCATA+TGG 0.473626 4.2:+29449236 MS.gene045452:CDS
AATTCCAACATTGAAGAAGT+TGG 0.478445 4.2:+29449854 MS.gene045452:CDS
TTGGTAGTGTCGAGTCTCTC+AGG 0.484028 4.2:+29450096 MS.gene045452:CDS
ACTAGATCTACGAGGCAATC+TGG 0.484619 4.2:-29449438 None:intergenic
TTCTCGTCTCTCTACGGAAG+AGG 0.486845 4.2:+29449314 MS.gene045452:CDS
ATGTCCAACTTCTTCAATGT+TGG 0.494500 4.2:-29449858 None:intergenic
GGTTGGATTTGTGAAGTAGT+TGG 0.497013 4.2:-29449464 None:intergenic
GGATCTTACTTATCCTTGGA+TGG 0.498856 4.2:+29451010 MS.gene045452:CDS
AAGGACAACTCTTGTAAGAC+AGG 0.508600 4.2:-29449792 None:intergenic
TACCATCAGGTACAGAATCA+AGG 0.516438 4.2:-29449683 None:intergenic
TATCCAACTTAGTCAATGAC+CGG 0.522921 4.2:-29449647 None:intergenic
CTAGGTTAAGTGTAAGATCA+TGG 0.524663 4.2:-29449578 None:intergenic
TTCCTTGATTCTGTACCTGA+TGG 0.531110 4.2:+29449681 MS.gene045452:CDS
ATTGAGCTGTTCAGTCGTCT+TGG 0.533363 4.2:+29450077 MS.gene045452:CDS
ATCCCGGTCATTGACTAAGT+TGG 0.539690 4.2:+29449644 MS.gene045452:CDS
CCAATAGTTTCTCGGCATCC+CGG 0.540751 4.2:+29449628 MS.gene045452:CDS
CTATGGAGGTAGAGTTAACA+AGG 0.542514 4.2:-29449986 None:intergenic
AATATAATGAAGAATTCCCT+CGG 0.546133 4.2:-29449289 None:intergenic
CAATTGCAAGCTTTAGGCAT+GGG 0.547449 4.2:+29451235 MS.gene045452:CDS
ACTTAAAGATGAAAGATTCA+CGG 0.550056 4.2:-29449934 None:intergenic
AAGATAATATCTTCAAGCTA+GGG 0.550299 4.2:-29449713 None:intergenic
AGCCGACTTCTCATTTGTGA+AGG 0.550930 4.2:-29449748 None:intergenic
GGAGATGAACATTTACTGTA+CGG 0.552497 4.2:+29451168 MS.gene045452:CDS
AGATGAAGCCGAAATCAGAT+TGG 0.557556 4.2:+29451111 MS.gene045452:CDS
CTAGGGAAACAGATACCATC+AGG 0.559011 4.2:-29449696 None:intergenic
AGAGAAGATTTGAAACAGCA+AGG 0.559103 4.2:-29451058 None:intergenic
TATTCTTTCTCGTCTCTCTA+CGG 0.559151 4.2:+29449308 MS.gene045452:CDS
TGCGTCAAATTCTTGAACGA+AGG 0.559936 4.2:-29450797 None:intergenic
CTTCTATATTAGCAACAAAG+TGG 0.565241 4.2:+29449346 MS.gene045452:CDS
AAATCTCGAAAATCAAAGAC+GGG 0.570247 4.2:-29449390 None:intergenic
TATCCTTGGATGGTGAAGAC+TGG 0.573895 4.2:+29451020 MS.gene045452:CDS
TGTCCAGTCTTCACCATCCA+AGG 0.574526 4.2:-29451023 None:intergenic
CCAATTGCAAGCTTTAGGCA+TGG 0.576197 4.2:+29451234 MS.gene045452:CDS
AGATTGCCTCGTAGATCTAG+TGG 0.576199 4.2:+29449440 MS.gene045452:CDS
TCTGCTAATACTTCACAACT+AGG 0.576306 4.2:-29450842 None:intergenic
TACCTTCACAAATGAGAAGT+CGG 0.580484 4.2:+29449746 MS.gene045452:CDS
TAAATCTCGAAAATCAAAGA+CGG 0.582283 4.2:-29449391 None:intergenic
CATCAACTATTGTTGATACA+GGG 0.584309 4.2:+29449514 MS.gene045452:CDS
TCATTAACTTGCGTCACTCG+TGG 0.584904 4.2:+29451266 MS.gene045452:CDS
GAGATGAACATTTACTGTAC+GGG 0.586511 4.2:+29451169 MS.gene045452:CDS
ATATAATGAAGAATTCCCTC+GGG 0.598954 4.2:-29449288 None:intergenic
AGAATTTCTTGACATTTATG+GGG 0.610502 4.2:+29450889 MS.gene045452:CDS
CGAAGAAGCTGGCTGATGTG+AGG 0.621819 4.2:+29451209 MS.gene045452:CDS
ATGATTAGCGATTTACCCGA+GGG 0.622620 4.2:+29449273 MS.gene045452:CDS
AATATATGCATCAACTATGG+AGG 0.633314 4.2:-29450000 None:intergenic
ATCCAACTTAGTCAATGACC+GGG 0.638859 4.2:-29449646 None:intergenic
CAACAAAGTGGAGATACTTG+TGG 0.640766 4.2:+29449358 MS.gene045452:CDS
TATGATTAGCGATTTACCCG+AGG 0.648778 4.2:+29449272 MS.gene045452:CDS
AGGACAACTCTTGTAAGACA+GGG 0.690229 4.2:-29449791 None:intergenic
GTTGGTCCACTAGATCTACG+AGG 0.818443 4.2:-29449446 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAGTTAAATTAAATG+AGG - chr4.2:29450267-29450286 None:intergenic 10.0%
!! TAAAAAGTTAAATTAAATGA+GGG - chr4.2:29450266-29450285 None:intergenic 10.0%
!! AAAAAGTTAAATTAAATGAG+GGG - chr4.2:29450265-29450284 None:intergenic 15.0%
!! AAGAATATGCAAATAATATA+AGG - chr4.2:29450500-29450519 None:intergenic 15.0%
!! ATTATTTGCATATTCTTTAA+AGG + chr4.2:29450503-29450522 MS.gene045452:intron 15.0%
!! TTATTTGCATATTCTTTAAA+GGG + chr4.2:29450504-29450523 MS.gene045452:intron 15.0%
!!! GACTTGATTTTTTTTTTTAT+TGG + chr4.2:29450335-29450354 MS.gene045452:intron 15.0%
!! ACACCTTTATAAAAATTAGT+TGG + chr4.2:29450616-29450635 MS.gene045452:intron 20.0%
!! GATCAATTACATTTCTTAAT+AGG + chr4.2:29450376-29450395 MS.gene045452:intron 20.0%
!! TAGAATTTCTTGACATTTAT+GGG + chr4.2:29450888-29450907 MS.gene045452:CDS 20.0%
!! TTGCTTATATTTCATTACAA+AGG - chr4.2:29450197-29450216 None:intergenic 20.0%
!!! ACACCAACTAATTTTTATAA+AGG - chr4.2:29450622-29450641 None:intergenic 20.0%
! AAAGATAATATCTTCAAGCT+AGG - chr4.2:29449717-29449736 None:intergenic 25.0%
! AAATTATTGTTAGCCGTTAA+AGG - chr4.2:29450951-29450970 None:intergenic 25.0%
! AAGATAATATCTTCAAGCTA+GGG - chr4.2:29449716-29449735 None:intergenic 25.0%
! AATATAATGAAGAATTCCCT+CGG - chr4.2:29449292-29449311 None:intergenic 25.0%
! ACAAGGAAACAATTTATAGT+TGG - chr4.2:29449972-29449991 None:intergenic 25.0%
! ACCTAGAATCTAAAAATAGT+AGG + chr4.2:29449595-29449614 MS.gene045452:CDS 25.0%
! ACTTAAAGATGAAAGATTCA+CGG - chr4.2:29449937-29449956 None:intergenic 25.0%
! AGAATTTCTTGACATTTATG+GGG + chr4.2:29450889-29450908 MS.gene045452:CDS 25.0%
! ATCAATATATGCATCAACTA+TGG - chr4.2:29450006-29450025 None:intergenic 25.0%
! ATCGTTGTGATATTTAAAGA+AGG - chr4.2:29450713-29450732 None:intergenic 25.0%
! ATGACCCAATTTATTAATCA+TGG + chr4.2:29450294-29450313 MS.gene045452:intron 25.0%
! ATTGTTAAATAAGATCGAAG+TGG - chr4.2:29450227-29450246 None:intergenic 25.0%
! CAAGGAAACAATTTATAGTT+GGG - chr4.2:29449971-29449990 None:intergenic 25.0%
! CTAGAATTTCTTGACATTTA+TGG + chr4.2:29450887-29450906 MS.gene045452:CDS 25.0%
! GCTAATCATATCTTTCATAT+CGG - chr4.2:29449262-29449281 None:intergenic 25.0%
! TAAATCTCGAAAATCAAAGA+CGG - chr4.2:29449394-29449413 None:intergenic 25.0%
! TCGTTGTGATATTTAAAGAA+GGG - chr4.2:29450712-29450731 None:intergenic 25.0%
! TTGATGCATATATTGATCTT+GGG + chr4.2:29450009-29450028 MS.gene045452:CDS 25.0%
!! ACTAAGTTGGATATAGTATT+TGG + chr4.2:29449657-29449676 MS.gene045452:CDS 25.0%
!!! ACCTACTATTTTTAGATTCT+AGG - chr4.2:29449599-29449618 None:intergenic 25.0%
!!! ATGTCAAGAAATTCTAGTTT+AGG - chr4.2:29450884-29450903 None:intergenic 25.0%
!!! TGTGTATTGATTCTTGTTTA+GGG + chr4.2:29450989-29451008 MS.gene045452:intron 25.0%
!!! TTGTGTATTGATTCTTGTTT+AGG + chr4.2:29450988-29451007 MS.gene045452:intron 25.0%
AAAATCAAAGACGGGTAATT+GGG - chr4.2:29449385-29449404 None:intergenic 30.0%
AAACTTCACCAATCTGATTT+CGG - chr4.2:29451122-29451141 None:intergenic 30.0%
AAATCTCGAAAATCAAAGAC+GGG - chr4.2:29449393-29449412 None:intergenic 30.0%
AATATATGCATCAACTATGG+AGG - chr4.2:29450003-29450022 None:intergenic 30.0%
AATTCCAACATTGAAGAAGT+TGG + chr4.2:29449854-29449873 MS.gene045452:CDS 30.0%
ACCCAATTTATTAATCATGG+AGG + chr4.2:29450297-29450316 MS.gene045452:intron 30.0%
ACCCTCCATGATTAATAAAT+TGG - chr4.2:29450302-29450321 None:intergenic 30.0%
AGAAAATGTCACGTTCTTAA+GGG + chr4.2:29451147-29451166 MS.gene045452:CDS 30.0%
ATATAATGAAGAATTCCCTC+GGG - chr4.2:29449291-29449310 None:intergenic 30.0%
ATCAAAAAAATCGAAGAAGC+TGG + chr4.2:29451198-29451217 MS.gene045452:CDS 30.0%
ATCACACTACGTAATACTTA+AGG - chr4.2:29450421-29450440 None:intergenic 30.0%
ATTGCTAAAAGACACTTTCA+TGG - chr4.2:29450546-29450565 None:intergenic 30.0%
ATTTCGAACATACAACTGTT+AGG - chr4.2:29449909-29449928 None:intergenic 30.0%
CATCAACTATTGTTGATACA+GGG + chr4.2:29449514-29449533 MS.gene045452:CDS 30.0%
CCCAATTTATTAATCATGGA+GGG + chr4.2:29450298-29450317 MS.gene045452:intron 30.0%
CCCTCCATGATTAATAAATT+GGG - chr4.2:29450301-29450320 None:intergenic 30.0%
CTAAAAGACACCTTCATAAA+AGG + chr4.2:29450671-29450690 MS.gene045452:intron 30.0%
CTTCTATATTAGCAACAAAG+TGG + chr4.2:29449346-29449365 MS.gene045452:CDS 30.0%
GTTGATGCATATATTGATCT+TGG + chr4.2:29450008-29450027 MS.gene045452:CDS 30.0%
TAAGCTCCAAAGATATCATA+TGG + chr4.2:29449236-29449255 MS.gene045452:CDS 30.0%
TAGAAAATGTCACGTTCTTA+AGG + chr4.2:29451146-29451165 MS.gene045452:CDS 30.0%
TCACACTACGTAATACTTAA+GGG - chr4.2:29450420-29450439 None:intergenic 30.0%
TTGCTAAAAGACACTTTCAT+GGG - chr4.2:29450545-29450564 None:intergenic 30.0%
! CAATGAAGAGCTCTTTTATA+CGG - chr4.2:29449488-29449507 None:intergenic 30.0%
! TGTGATATTTCAGATTTTCG+TGG + chr4.2:29451088-29451107 MS.gene045452:CDS 30.0%
!! ATTCTAGTTTAGGACTCTTT+CGG - chr4.2:29450874-29450893 None:intergenic 30.0%
AAAGTGAAAATCACACCTTG+AGG - chr4.2:29450574-29450593 None:intergenic 35.0%
ATGTCCAACTTCTTCAATGT+TGG - chr4.2:29449861-29449880 None:intergenic 35.0%
CACACTACGTAATACTTAAG+GGG - chr4.2:29450419-29450438 None:intergenic 35.0%
CCATCAACTATTGTTGATAC+AGG + chr4.2:29449513-29449532 MS.gene045452:CDS 35.0%
CCTGTATCAACAATAGTTGA+TGG - chr4.2:29449516-29449535 None:intergenic 35.0%
CTAGGTTAAGTGTAAGATCA+TGG - chr4.2:29449581-29449600 None:intergenic 35.0%
GAAAATCAAAGACGGGTAAT+TGG - chr4.2:29449386-29449405 None:intergenic 35.0%
GAGATGAACATTTACTGTAC+GGG + chr4.2:29451169-29451188 MS.gene045452:CDS 35.0%
GCTATCAGATGAAACTATTC+AGG + chr4.2:29450118-29450137 MS.gene045452:CDS 35.0%
GGAGATGAACATTTACTGTA+CGG + chr4.2:29451168-29451187 MS.gene045452:CDS 35.0%
GTCCTTCGAAAAATGTTACT+GGG + chr4.2:29449809-29449828 MS.gene045452:CDS 35.0%
TACCTTCACAAATGAGAAGT+CGG + chr4.2:29449746-29449765 MS.gene045452:CDS 35.0%
TATCCAACTTAGTCAATGAC+CGG - chr4.2:29449650-29449669 None:intergenic 35.0%
TATCGGCCATATGATATCTT+TGG - chr4.2:29449245-29449264 None:intergenic 35.0%
TATTCTTTCTCGTCTCTCTA+CGG + chr4.2:29449308-29449327 MS.gene045452:CDS 35.0%
TCTGCTAATACTTCACAACT+AGG - chr4.2:29450845-29450864 None:intergenic 35.0%
TGTCCTTCGAAAAATGTTAC+TGG + chr4.2:29449808-29449827 MS.gene045452:CDS 35.0%
TTAGGGATCTTACTTATCCT+TGG + chr4.2:29451006-29451025 MS.gene045452:intron 35.0%
TTATTGTTAGCCGTTAAAGG+TGG - chr4.2:29450948-29450967 None:intergenic 35.0%
! AGAGAAGATTTGAAACAGCA+AGG - chr4.2:29451061-29451080 None:intergenic 35.0%
! CAACATGCAGTTCGTTATTT+TGG - chr4.2:29450046-29450065 None:intergenic 35.0%
! CTAGAAGACACCTTTTATGA+AGG - chr4.2:29450684-29450703 None:intergenic 35.0%
! TTTTCTTCTGCCACCTTTAA+CGG + chr4.2:29450935-29450954 MS.gene045452:intron 35.0%
AAAGGTGGCAGAAGAAAATC+TGG - chr4.2:29450933-29450952 None:intergenic 40.0%
AAGGACAACTCTTGTAAGAC+AGG - chr4.2:29449795-29449814 None:intergenic 40.0%
AGATGAAGCCGAAATCAGAT+TGG + chr4.2:29451111-29451130 MS.gene045452:CDS 40.0%
AGGAACCAATTGCAAGCTTT+AGG + chr4.2:29451229-29451248 MS.gene045452:CDS 40.0%
AGGACAACTCTTGTAAGACA+GGG - chr4.2:29449794-29449813 None:intergenic 40.0%
ATCCAACTTAGTCAATGACC+GGG - chr4.2:29449649-29449668 None:intergenic 40.0%
ATGATTAGCGATTTACCCGA+GGG + chr4.2:29449273-29449292 MS.gene045452:CDS 40.0%
CAACAAAGTGGAGATACTTG+TGG + chr4.2:29449358-29449377 MS.gene045452:CDS 40.0%
CGTAGTTAAGACACTAGCAA+GGG - chr4.2:29450754-29450773 None:intergenic 40.0%
CGTGTTACCCAATAGTTTCT+CGG + chr4.2:29449620-29449639 MS.gene045452:CDS 40.0%
CTATGGAGGTAGAGTTAACA+AGG - chr4.2:29449989-29450008 None:intergenic 40.0%
GGATCTTACTTATCCTTGGA+TGG + chr4.2:29451010-29451029 MS.gene045452:CDS 40.0%
GGTGACTTAGAATTTCGCTT+TGG - chr4.2:29449420-29449439 None:intergenic 40.0%
GGTTGGATTTGTGAAGTAGT+TGG - chr4.2:29449467-29449486 None:intergenic 40.0%
TACCATCAGGTACAGAATCA+AGG - chr4.2:29449686-29449705 None:intergenic 40.0%
TATGATTAGCGATTTACCCG+AGG + chr4.2:29449272-29449291 MS.gene045452:CDS 40.0%
TGCGTCAAATTCTTGAACGA+AGG - chr4.2:29450800-29450819 None:intergenic 40.0%
TTCCTTGATTCTGTACCTGA+TGG + chr4.2:29449681-29449700 MS.gene045452:CDS 40.0%
! GAAGAGCTCTTTTATACGGT+TGG - chr4.2:29449484-29449503 None:intergenic 40.0%
! TTTTAGCAATCCACACCTCA+AGG + chr4.2:29450556-29450575 MS.gene045452:intron 40.0%
!! CAATTGCAAGCTTTAGGCAT+GGG + chr4.2:29451235-29451254 MS.gene045452:CDS 40.0%
!! CACCCAGTAACATTTTTCGA+AGG - chr4.2:29449814-29449833 None:intergenic 40.0%
!!! CGGCTCAAAGACTTTTTTCT+GGG + chr4.2:29449766-29449785 MS.gene045452:CDS 40.0%
!!! TCGGCTCAAAGACTTTTTTC+TGG + chr4.2:29449765-29449784 MS.gene045452:CDS 40.0%
ACTAGATCTACGAGGCAATC+TGG - chr4.2:29449441-29449460 None:intergenic 45.0%
AGATTGCCTCGTAGATCTAG+TGG + chr4.2:29449440-29449459 MS.gene045452:CDS 45.0%
ATTGAGCTGTTCAGTCGTCT+TGG + chr4.2:29450077-29450096 MS.gene045452:CDS 45.0%
CCATGCCTAAAGCTTGCAAT+TGG - chr4.2:29451237-29451256 None:intergenic 45.0%
CTAGGGAAACAGATACCATC+AGG - chr4.2:29449699-29449718 None:intergenic 45.0%
GAAAATCACACCTTGAGGTG+TGG - chr4.2:29450569-29450588 None:intergenic 45.0%
GCGTAGTTAAGACACTAGCA+AGG - chr4.2:29450755-29450774 None:intergenic 45.0%
TATCCTTGGATGGTGAAGAC+TGG + chr4.2:29451020-29451039 MS.gene045452:CDS 45.0%
! AGCCGACTTCTCATTTGTGA+AGG - chr4.2:29449751-29449770 None:intergenic 45.0%
! ATCCCGGTCATTGACTAAGT+TGG + chr4.2:29449644-29449663 MS.gene045452:CDS 45.0%
!! CCAATTGCAAGCTTTAGGCA+TGG + chr4.2:29451234-29451253 MS.gene045452:CDS 45.0%
!! TCATTAACTTGCGTCACTCG+TGG + chr4.2:29451266-29451285 MS.gene045452:CDS 45.0%
CCAATAGTTTCTCGGCATCC+CGG + chr4.2:29449628-29449647 MS.gene045452:CDS 50.0%
CGGGATGCCGAGAAACTATT+GGG - chr4.2:29449630-29449649 None:intergenic 50.0%
GTTGGTCCACTAGATCTACG+AGG - chr4.2:29449449-29449468 None:intergenic 50.0%
TGTCCAGTCTTCACCATCCA+AGG - chr4.2:29451026-29451045 None:intergenic 50.0%
TTCTCGTCTCTCTACGGAAG+AGG + chr4.2:29449314-29449333 MS.gene045452:CDS 50.0%
!! TTGGTAGTGTCGAGTCTCTC+AGG + chr4.2:29450096-29450115 MS.gene045452:CDS 50.0%
CCGGGATGCCGAGAAACTAT+TGG - chr4.2:29449631-29449650 None:intergenic 55.0%
CGAAGAAGCTGGCTGATGTG+AGG + chr4.2:29451209-29451228 MS.gene045452:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 29449204 29451294 29449204 ID=MS.gene045452
chr4.2 mRNA 29449204 29451294 29449204 ID=MS.gene045452.t1;Parent=MS.gene045452
chr4.2 exon 29449204 29450139 29449204 ID=MS.gene045452.t1.exon1;Parent=MS.gene045452.t1
chr4.2 CDS 29449204 29450139 29449204 ID=cds.MS.gene045452.t1;Parent=MS.gene045452.t1
chr4.2 exon 29450761 29450910 29450761 ID=MS.gene045452.t1.exon2;Parent=MS.gene045452.t1
chr4.2 CDS 29450761 29450910 29450761 ID=cds.MS.gene045452.t1;Parent=MS.gene045452.t1
chr4.2 exon 29451010 29451294 29451010 ID=MS.gene045452.t1.exon3;Parent=MS.gene045452.t1
chr4.2 CDS 29451010 29451294 29451010 ID=cds.MS.gene045452.t1;Parent=MS.gene045452.t1
Gene Sequence

>MS.gene045452

ATGGCTTCTACAATCTCATCATCAAATTCACATAAGCTCCAAAGATATCATATGGCCGATATGAAAGATATGATTAGCGATTTACCCGAGGGAATTCTTCATTATATTCTTTCTCGTCTCTCTACGGAAGAGGCTGTAAGAACTTCTATATTAGCAACAAAGTGGAGATACTTGTGGACCCAATTACCCGTCTTTGATTTTCGAGATTTATCTCCAAAGCGAAATTCTAAGTCACCAGATTGCCTCGTAGATCTAGTGGACCAACTACTTCACAAATCCAACCGTATAAAAGAGCTCTTCATTGAATTACCATCAACTATTGTTGATACAGGGAAAGTTACTTCAATGTTATCTTCTGCATTGATGCATGATGTCCATGATCTTACACTTAACCTAGAATCTAAAAATAGTAGGTTCGTGTTACCCAATAGTTTCTCGGCATCCCGGTCATTGACTAAGTTGGATATAGTATTTGGCTTCCTTGATTCTGTACCTGATGGTATCTGTTTCCCTAGCTTGAAGATATTATCTTTTGCACATCTTACCTTCACAAATGAGAAGTCGGCTCAAAGACTTTTTTCTGGGTGCCCTGTCTTACAAGAGTTGTCCTTCGAAAAATGTTACTGGGTGAACATAAACATTAGTGTTGCAATTCCAACATTGAAGAAGTTGGACATCTTTTTCAGATCTTCTAGTCTAGATCCTAACAGTTGTATGTTCGAAATTGATGCCGTGAATCTTTCATCTTTAAGTTACAAAAGTAACCCAACTATAAATTGTTTCCTTGTTAACTCTACCTCCATAGTTGATGCATATATTGATCTTGGGTTTTTCTGTGTCCAAAATAACGAACTGCATGTTGCTATATTTGCAATTGAGCTGTTCAGTCGTCTTGGTAGTGTCGAGTCTCTCAGGCTATCAGATGAAACTATTCAGGTATGTTTGAATGTTTACTTATTGTCTTCATTAATATAATATAAATATTGTACTCCTTTGTAATGAAATATAAGCAAATCTTAACCACTTCGATCTTATTTAACAATAGTATCTCTATATTACCCCTCATTTAATTTAACTTTTTATATTTTCAATGACCCAATTTATTAATCATGGAGGGTAGTTTAGACAACAGACTTGATTTTTTTTTTTATTGGATTGCATCACTTAAATTTGATCAATTACATTTCTTAATAGGCTTAATAACAGTTTTGACCCCTTAAGTATTACGTAGTGTGATCAATTTATGTTTATAATTTATAGATAATGTCTATTGTAAATGTTGATTAGTCATGTCCTTATATTATTTGCATATTCTTTAAAGGGTTTTGCTAGAAGCTACCCATGAAAGTGTCTTTTAGCAATCCACACCTCAAGGTGTGATTTTCACTTTTTAGTTATAACTTTGCTAAAAGACACCTTTATAAAAATTAGTTGGTGTCTTTTAACAAATGCTCATAGAATAACTTGCTAAAAGACACCTTCATAAAAGGTGTCTTCTAGCAAAACCCTTCTTTAAATATCACAACGATCTTGACTTGTTTTTGTTTCCCTTGCTAGTGTCTTAACTACGCAAAATCTGCTCTTCATCTTTTACCTTCGTTCAAGAATTTGACGCATCTTGAAGTGCATTTCGACGATCCTAGTTGTGAAGTATTAGCAGACATTCTCCGAAAGAGTCCTAAACTAGAATTTCTTGACATTTATGGGGTACATCTTGTATCTTGCTCCAGATTTTCTTCTGCCACCTTTAACGGCTAACAATAATTTTATCTCAGTCTGTTGACTTGTGTATTGATTCTTGTTTAGGGATCTTACTTATCCTTGGATGGTGAAGACTGGACATCAGATTCATTGCCTTGCTGTTTCAAATCTTCTCTCAAATCATGTGATATTTCAGATTTTCGTGGAGATGAAGCCGAAATCAGATTGGTGAAGTTTTTGTTAGAAAATGTCACGTTCTTAAGGGAGATGAACATTTACTGTACGGGATATCTATCAAAAAAATCGAAGAAGCTGGCTGATGTGAGGAACCAATTGCAAGCTTTAGGCATGGGAAGTTGTGTCATTAACTTGCGTCACTCGTGGTTTTGA

Protein sequence

>MS.gene045452.t1

MASTISSSNSHKLQRYHMADMKDMISDLPEGILHYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDLSPKRNSKSPDCLVDLVDQLLHKSNRIKELFIELPSTIVDTGKVTSMLSSALMHDVHDLTLNLESKNSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHLTFTNEKSAQRLFSGCPVLQELSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDPNSCMFEIDAVNLSSLSYKSNPTINCFLVNSTSIVDAYIDLGFFCVQNNELHVAIFAIELFSRLGSVESLRLSDETIQCLNYAKSALHLLPSFKNLTHLEVHFDDPSCEVLADILRKSPKLEFLDIYGGSYLSLDGEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTFLREMNIYCTGYLSKKSKKLADVRNQLQALGMGSCVINLRHSWF