Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91884.t1 | RHN55343.1 | 74.8 | 412 | 19 | 1 | 1 | 327 | 1 | 412 | 7.10E-163 | 583.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91884.t1 | Q94B46 | 24.8 | 359 | 163 | 11 | 13 | 279 | 2 | 345 | 1.2e-12 | 76.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91884.t1 | A0A396HS78 | 74.8 | 412 | 19 | 1 | 1 | 327 | 1 | 412 | 5.1e-163 | 583.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91884.t1 | MTR_7g023330 | 46.328 | 354 | 150 | 9 | 2 | 322 | 3 | 349 | 1.12e-79 | 254 |
| MS.gene91884.t1 | MTR_5g039970 | 92.029 | 138 | 11 | 0 | 1 | 138 | 1 | 138 | 5.75e-75 | 240 |
| MS.gene91884.t1 | MTR_5g039970 | 93.000 | 100 | 7 | 0 | 138 | 237 | 223 | 322 | 1.09e-46 | 166 |
| MS.gene91884.t1 | MTR_5g039950 | 40.722 | 388 | 142 | 10 | 1 | 322 | 5 | 370 | 1.02e-64 | 216 |
| MS.gene91884.t1 | MTR_4g130200 | 40.761 | 368 | 129 | 8 | 9 | 322 | 10 | 342 | 4.49e-63 | 211 |
| MS.gene91884.t1 | MTR_4g080590 | 55.367 | 177 | 76 | 2 | 147 | 322 | 228 | 402 | 5.36e-47 | 170 |
| MS.gene91884.t1 | MTR_4g080590 | 50.000 | 138 | 65 | 1 | 1 | 138 | 5 | 138 | 6.36e-33 | 131 |
| MS.gene91884.t1 | MTR_3g048290 | 53.731 | 134 | 60 | 1 | 1 | 132 | 5 | 138 | 4.01e-36 | 140 |
| MS.gene91884.t1 | MTR_3g048290 | 37.000 | 200 | 104 | 5 | 129 | 316 | 220 | 409 | 7.70e-15 | 77.4 |
| MS.gene91884.t1 | MTR_4g080590 | 50.000 | 138 | 65 | 1 | 1 | 138 | 5 | 138 | 7.73e-34 | 132 |
| MS.gene91884.t1 | MTR_4g080590 | 55.556 | 135 | 58 | 1 | 147 | 281 | 228 | 360 | 5.37e-33 | 129 |
| MS.gene91884.t1 | MTR_4g080773 | 48.387 | 186 | 92 | 4 | 138 | 322 | 235 | 417 | 3.77e-33 | 132 |
| MS.gene91884.t1 | MTR_4g080773 | 51.408 | 142 | 54 | 3 | 3 | 132 | 6 | 144 | 5.11e-30 | 123 |
| MS.gene91884.t1 | MTR_4g080773 | 48.387 | 186 | 92 | 4 | 138 | 322 | 235 | 417 | 4.58e-33 | 132 |
| MS.gene91884.t1 | MTR_4g080773 | 51.408 | 142 | 54 | 3 | 3 | 132 | 6 | 144 | 5.36e-30 | 123 |
| MS.gene91884.t1 | MTR_4g080807 | 35.439 | 285 | 129 | 5 | 90 | 322 | 1 | 282 | 2.58e-31 | 125 |
| MS.gene91884.t1 | MTR_4g080787 | 46.429 | 196 | 98 | 5 | 128 | 322 | 225 | 414 | 4.00e-31 | 126 |
| MS.gene91884.t1 | MTR_4g080787 | 50.000 | 142 | 56 | 3 | 3 | 132 | 6 | 144 | 2.37e-29 | 121 |
| MS.gene91884.t1 | MTR_7g023310 | 47.291 | 203 | 91 | 6 | 127 | 322 | 217 | 410 | 5.81e-30 | 122 |
| MS.gene91884.t1 | MTR_7g023310 | 47.407 | 135 | 64 | 4 | 1 | 132 | 5 | 135 | 8.11e-27 | 113 |
| MS.gene91884.t1 | MTR_4g080813 | 69.231 | 65 | 20 | 0 | 1 | 65 | 1 | 65 | 8.91e-25 | 99.0 |
| MS.gene91884.t1 | MTR_7g039630 | 43.537 | 147 | 74 | 3 | 142 | 287 | 206 | 344 | 1.31e-22 | 99.4 |
| MS.gene91884.t1 | MTR_7g039630 | 37.594 | 133 | 48 | 1 | 1 | 133 | 5 | 102 | 9.47e-20 | 90.9 |
| MS.gene91884.t1 | MTR_4g081030 | 45.312 | 128 | 67 | 2 | 138 | 265 | 210 | 334 | 1.81e-17 | 84.7 |
| MS.gene91884.t1 | MTR_4g081030 | 37.600 | 125 | 63 | 3 | 12 | 133 | 10 | 122 | 1.75e-13 | 72.4 |
| MS.gene91884.t1 | MTR_2g094750 | 47.727 | 88 | 45 | 1 | 17 | 103 | 88 | 175 | 3.58e-16 | 81.6 |
| MS.gene91884.t1 | MTR_2g094750 | 42.063 | 126 | 69 | 3 | 157 | 279 | 333 | 457 | 4.09e-16 | 81.3 |
| MS.gene91884.t1 | MTR_3g105060 | 24.566 | 346 | 209 | 13 | 19 | 333 | 14 | 338 | 3.20e-12 | 68.6 |
| MS.gene91884.t1 | MTR_6g018660 | 45.833 | 96 | 41 | 3 | 1 | 94 | 1 | 87 | 4.38e-12 | 68.2 |
| MS.gene91884.t1 | MTR_8g467800 | 38.000 | 100 | 53 | 3 | 5 | 101 | 6 | 99 | 5.20e-12 | 67.8 |
| MS.gene91884.t1 | MTR_8g467800 | 38.384 | 99 | 52 | 3 | 6 | 101 | 7 | 99 | 1.21e-11 | 67.4 |
| MS.gene91884.t1 | MTR_8g077460 | 26.911 | 327 | 218 | 10 | 18 | 327 | 9 | 331 | 1.42e-11 | 66.6 |
| MS.gene91884.t1 | MTR_5g021550 | 32.520 | 123 | 77 | 2 | 18 | 134 | 18 | 140 | 1.43e-11 | 63.2 |
| MS.gene91884.t1 | MTR_2g082800 | 27.014 | 211 | 128 | 8 | 5 | 211 | 15 | 203 | 2.69e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 104 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGGTGTTCCTGTGTTTA+TGG | 0.159690 | 5.3:+28059957 | MS.gene91884:CDS |
| ACATTAAAGGTGGAAATTTA+AGG | 0.172495 | 5.3:+28060742 | MS.gene91884:CDS |
| ATTGATCTACTTAACATTAA+AGG | 0.188502 | 5.3:+28060729 | MS.gene91884:CDS |
| TTTCCACTTTGTAGCTAATA+TGG | 0.218479 | 5.3:-28056994 | None:intergenic |
| GGAGGAGGATGTTTGGGTTT+GGG | 0.229054 | 5.3:+28059238 | MS.gene91884:CDS |
| AATATTTACAGCAAAGTAAT+TGG | 0.231517 | 5.3:+28060486 | MS.gene91884:intron |
| TTCCTGTGTTTATGGGTAGA+TGG | 0.246394 | 5.3:+28059965 | MS.gene91884:CDS |
| AACTTTACAGCTTCGATATC+AGG | 0.268121 | 5.3:-28058309 | None:intergenic |
| GGAAGTTCTTCACATTTCTA+AGG | 0.299285 | 5.3:+28058091 | MS.gene91884:CDS |
| CCTAGCAAATGTACAGTTTA+GGG | 0.304785 | 5.3:-28057252 | None:intergenic |
| AGCTAATTCTTTGTTATCTT+CGG | 0.308106 | 5.3:+28057196 | MS.gene91884:CDS |
| CGGAGGAGGATGTTTGGGTT+TGG | 0.313049 | 5.3:+28059237 | MS.gene91884:CDS |
| CAAAAGACAATATGGCAGTT+AGG | 0.329617 | 5.3:+28059472 | MS.gene91884:CDS |
| TTTCCACAAGACTCCTAATC+TGG | 0.345074 | 5.3:+28058070 | MS.gene91884:CDS |
| CAATTGAATCCTTACTTTCC+CGG | 0.348379 | 5.3:-28060710 | None:intergenic |
| GTTCTTACAGTATCTTTAGT+AGG | 0.349888 | 5.3:-28056969 | None:intergenic |
| ACCTAGCAAATGTACAGTTT+AGG | 0.350206 | 5.3:-28057253 | None:intergenic |
| AACAGAATCCACACTTCATT+TGG | 0.356956 | 5.3:+28060543 | MS.gene91884:CDS |
| TATCGCCTATATCATGTCTT+TGG | 0.358479 | 5.3:-28056887 | None:intergenic |
| ATATATGTGAAGACTCTTAC+CGG | 0.358890 | 5.3:+28060691 | MS.gene91884:CDS |
| TTCGGTGTTCCTGTGTTTAT+GGG | 0.358992 | 5.3:+28059958 | MS.gene91884:CDS |
| TTGATGCATGTATTGATCTT+AGG | 0.359425 | 5.3:+28057678 | MS.gene91884:CDS |
| ATCAATACATGCATCAACTA+TGG | 0.366463 | 5.3:-28057672 | None:intergenic |
| ATCCACGGAGGAGGATGTTT+GGG | 0.366593 | 5.3:+28059232 | MS.gene91884:CDS |
| TGTCTTGTCAAAAGACAATA+TGG | 0.379961 | 5.3:+28059464 | MS.gene91884:CDS |
| GGTTAGCAGAGGCCTAGTTT+TGG | 0.392140 | 5.3:+28059999 | MS.gene91884:CDS |
| TATCCACGGAGGAGGATGTT+TGG | 0.393178 | 5.3:+28059231 | MS.gene91884:CDS |
| AAGACATGATATAGGCGATA+TGG | 0.399660 | 5.3:+28056890 | MS.gene91884:CDS |
| ATTGAGCTATTGAGTCGATT+AGG | 0.403004 | 5.3:+28057746 | MS.gene91884:CDS |
| TGTTCTGGCTTTGATACATC+CGG | 0.413809 | 5.3:-28057065 | None:intergenic |
| TTAGGGAAAATTTAAGATCA+AGG | 0.420913 | 5.3:-28057235 | None:intergenic |
| ACGCATCTTGATGTGCCCTT+GGG | 0.430661 | 5.3:+28058011 | MS.gene91884:CDS |
| GACGCATCTTGATGTGCCCT+TGG | 0.432063 | 5.3:+28058010 | MS.gene91884:CDS |
| GGGCATCAAATTCATTTCCT+TGG | 0.437785 | 5.3:+28058232 | MS.gene91884:CDS |
| ATGTGAAGAACTTCCAGATT+AGG | 0.448255 | 5.3:-28058083 | None:intergenic |
| GTTTGGGGTCCAGATGTGTT+TGG | 0.450120 | 5.3:+28059254 | MS.gene91884:CDS |
| TCCTGTGTTTATGGGTAGAT+GGG | 0.450424 | 5.3:+28059966 | MS.gene91884:CDS |
| AAAAGACAATATGGCAGTTA+GGG | 0.451970 | 5.3:+28059473 | MS.gene91884:CDS |
| GTTAGGGTTGTTATCCTAGT+GGG | 0.452443 | 5.3:+28059489 | MS.gene91884:CDS |
| TCACTGCAAGTTTGCAGCAA+TGG | 0.453355 | 5.3:+28059572 | MS.gene91884:CDS |
| AAGCTCCAAAGACATGATAT+AGG | 0.460672 | 5.3:+28056882 | MS.gene91884:CDS |
| AATATCAAATGATACTCTTC+AGG | 0.464997 | 5.3:+28057787 | MS.gene91884:CDS |
| TGTATTGATCTTAGGTGTTA+CGG | 0.466447 | 5.3:+28057686 | MS.gene91884:CDS |
| CTTATTCTTGGATGAAGGAT+GGG | 0.472897 | 5.3:+28058212 | MS.gene91884:CDS |
| GAGGAGGATGTTTGGGTTTG+GGG | 0.475553 | 5.3:+28059239 | MS.gene91884:CDS |
| CAAACACTACCAAACACATC+TGG | 0.478546 | 5.3:-28059263 | None:intergenic |
| TCTTATTCTTGGATGAAGGA+TGG | 0.482853 | 5.3:+28058211 | MS.gene91884:CDS |
| GGATGTATCAAAGCCAGAAC+AGG | 0.485361 | 5.3:+28057067 | MS.gene91884:CDS |
| GGAAAATTGCCTCATAGATC+AGG | 0.490060 | 5.3:+28057094 | MS.gene91884:CDS |
| AGACTCTTACCGGGAAAGTA+AGG | 0.494418 | 5.3:+28060701 | MS.gene91884:CDS |
| TTCTTACAGTATCTTTAGTA+GGG | 0.494479 | 5.3:-28056968 | None:intergenic |
| CCCTAAACTGTACATTTGCT+AGG | 0.501730 | 5.3:+28057252 | MS.gene91884:CDS |
| CTGCGAATACGCAAATCACT+TGG | 0.509908 | 5.3:-28057560 | None:intergenic |
| CTTCACATTCAACCAAAACT+AGG | 0.512222 | 5.3:-28060011 | None:intergenic |
| CATTTGGTGCTTCAATTGAG+AGG | 0.522844 | 5.3:+28060559 | MS.gene91884:CDS |
| AATGCCTGCTAATACTTCAC+TGG | 0.524472 | 5.3:-28058048 | None:intergenic |
| ATCAAAATGATTTAAGTCGA+TGG | 0.528780 | 5.3:-28057537 | None:intergenic |
| GATTGACTATGCAGTTTGTG+TGG | 0.537210 | 5.3:+28059518 | MS.gene91884:CDS |
| CTTCCAGATTAGGAGTCTTG+TGG | 0.537229 | 5.3:-28058073 | None:intergenic |
| CATGCATCAACTATGGAGGT+AGG | 0.542206 | 5.3:-28057665 | None:intergenic |
| TAGGGTTGTTATCCTAGTGG+GGG | 0.544497 | 5.3:+28059491 | MS.gene91884:CDS |
| GAATGCAAAGTCTTTCTACA+TGG | 0.546122 | 5.3:-28057142 | None:intergenic |
| ATATGAAGAAGAACAGCCTC+GGG | 0.552463 | 5.3:-28056933 | None:intergenic |
| CCCACCAGTGAAGTATTAGC+AGG | 0.559620 | 5.3:+28058044 | MS.gene91884:CDS |
| CTTCCATATTAGCTACAAAG+TGG | 0.559991 | 5.3:+28056991 | MS.gene91884:CDS |
| GCCTGCTAATACTTCACTGG+TGG | 0.560009 | 5.3:-28058045 | None:intergenic |
| ATTGACTATGCAGTTTGTGT+GGG | 0.561025 | 5.3:+28059519 | MS.gene91884:CDS |
| CTATGCAGTTTGTGTGGGGA+AGG | 0.561252 | 5.3:+28059524 | MS.gene91884:CDS |
| CCTGCTAATACTTCACTGGT+GGG | 0.561622 | 5.3:-28058044 | None:intergenic |
| GTAGTGTTTGTCCACAGAGG+AGG | 0.564019 | 5.3:+28059276 | MS.gene91884:CDS |
| AATATGAAGAAGAACAGCCT+CGG | 0.566198 | 5.3:-28056934 | None:intergenic |
| GGAGAACGGTCGCATGCTTG+CGG | 0.567681 | 5.3:+28060507 | MS.gene91884:CDS |
| TGTGCATTTATCCACGGAGG+AGG | 0.570238 | 5.3:+28059223 | MS.gene91884:CDS |
| GATCTACTTAACATTAAAGG+TGG | 0.577759 | 5.3:+28060732 | MS.gene91884:CDS |
| GTTTGTCCACCTGATCTATG+AGG | 0.579288 | 5.3:-28057103 | None:intergenic |
| TGCAGTTTGTGTGGGGAAGG+TGG | 0.579528 | 5.3:+28059527 | MS.gene91884:CDS |
| CTACAAAGTGGAAATACTTG+TGG | 0.581650 | 5.3:+28057003 | MS.gene91884:CDS |
| ATGCATCAACTATGGAGGTA+GGG | 0.584062 | 5.3:-28057664 | None:intergenic |
| TTAGGGTTGTTATCCTAGTG+GGG | 0.588973 | 5.3:+28059490 | MS.gene91884:CDS |
| CGCATCTTGATGTGCCCTTG+GGG | 0.589045 | 5.3:+28058012 | MS.gene91884:CDS |
| AGTTAGGGTTGTTATCCTAG+TGG | 0.592043 | 5.3:+28059488 | MS.gene91884:CDS |
| AGGGTTGTTATCCTAGTGGG+GGG | 0.595188 | 5.3:+28059492 | MS.gene91884:CDS |
| ATCAAAGCCAGAACAGGAGT+CGG | 0.606211 | 5.3:+28057073 | MS.gene91884:CDS |
| TTGAAGCACCAAATGAAGTG+TGG | 0.610544 | 5.3:-28060551 | None:intergenic |
| ACAGCAAAGTAATTGGAGAA+CGG | 0.616994 | 5.3:+28060493 | MS.gene91884:intron |
| TCAGACACGTTCAGAAATGT+CGG | 0.622891 | 5.3:+28060055 | MS.gene91884:CDS |
| TATATGTGAAGACTCTTACC+GGG | 0.624460 | 5.3:+28060692 | MS.gene91884:CDS |
| GCAGGCTGTGCATTTATCCA+CGG | 0.626871 | 5.3:+28059217 | MS.gene91884:intron |
| CCTGTGTTTATGGGTAGATG+GGG | 0.632298 | 5.3:+28059967 | MS.gene91884:CDS |
| AAATTGCCTCATAGATCAGG+TGG | 0.634665 | 5.3:+28057097 | MS.gene91884:CDS |
| AGAAACTTGAAAATCAAAGA+CGG | 0.640999 | 5.3:-28057036 | None:intergenic |
| AGATGCGTCAAATTGAAGAA+CGG | 0.641774 | 5.3:-28057996 | None:intergenic |
| TTGGTAGTGTTTGTCCACAG+AGG | 0.642079 | 5.3:+28059273 | MS.gene91884:CDS |
| AACCCAAACATCCTCCTCCG+TGG | 0.645948 | 5.3:-28059234 | None:intergenic |
| AGAGAAGATGTGAAACACCA+AGG | 0.658962 | 5.3:-28058249 | None:intergenic |
| AATACATGCATCAACTATGG+AGG | 0.659926 | 5.3:-28057669 | None:intergenic |
| CCCCATCTACCCATAAACAC+AGG | 0.661781 | 5.3:-28059967 | None:intergenic |
| TGCGTCAAATTGAAGAACGG+AGG | 0.663918 | 5.3:-28057993 | None:intergenic |
| CTATGGAGGTAGGGTTAACG+AGG | 0.666420 | 5.3:-28057655 | None:intergenic |
| TTGACTATGCAGTTTGTGTG+GGG | 0.671604 | 5.3:+28059520 | MS.gene91884:CDS |
| CACCCGAACAACCTCCTCTG+TGG | 0.682420 | 5.3:-28059287 | None:intergenic |
| TATGATTAGTGAATTACCCG+AGG | 0.699428 | 5.3:+28056917 | MS.gene91884:CDS |
| CTGCTAATACTTCACTGGTG+GGG | 0.701325 | 5.3:-28058043 | None:intergenic |
| GGCTGTGCATTTATCCACGG+AGG | 0.702616 | 5.3:+28059220 | MS.gene91884:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCACAAAAATAAATAAATAA+AGG | - | chr5.3:28058484-28058503 | None:intergenic | 10.0% |
| !! | TGACTTTGTATAAATTTATT+TGG | + | chr5.3:28057465-28057484 | MS.gene91884:intron | 15.0% |
| !!! | TTTATTTATTTTTGTGAGAA+TGG | + | chr5.3:28058487-28058506 | MS.gene91884:intron | 15.0% |
| !! | AATACATAAAGAATATGCAA+TGG | - | chr5.3:28057903-28057922 | None:intergenic | 20.0% |
| !! | AATATTTACAGCAAAGTAAT+TGG | + | chr5.3:28060486-28060505 | MS.gene91884:intron | 20.0% |
| !! | ATTGATCTACTTAACATTAA+AGG | + | chr5.3:28060729-28060748 | MS.gene91884:CDS | 20.0% |
| !! | CTGATTTCATTAAGAAAAAT+CGG | - | chr5.3:28059341-28059360 | None:intergenic | 20.0% |
| !! | GGAATTATTATCAATAGATT+TGG | + | chr5.3:28058378-28058397 | MS.gene91884:intron | 20.0% |
| !!! | AACAATTTTGTGAAATGTTA+AGG | + | chr5.3:28058784-28058803 | MS.gene91884:intron | 20.0% |
| !!! | AATAAGTTGTGTTTAGAATT+TGG | + | chr5.3:28057314-28057333 | MS.gene91884:intron | 20.0% |
| !!! | CTTTTTCGTTTATCATTTAT+TGG | + | chr5.3:28059313-28059332 | MS.gene91884:intron | 20.0% |
| !!! | GACAAATTTTATAATTGGAT+GGG | - | chr5.3:28057636-28057655 | None:intergenic | 20.0% |
| !!! | GACTTATTTTCTATTAGATT+AGG | + | chr5.3:28059760-28059779 | MS.gene91884:intron | 20.0% |
| !!! | TATTTTCTATTAGATTAGGA+AGG | + | chr5.3:28059764-28059783 | MS.gene91884:intron | 20.0% |
| !!! | TTTTCTTAATGAAATCAGTT+TGG | + | chr5.3:28059343-28059362 | MS.gene91884:intron | 20.0% |
| ! | AAAGTGAAAGTTCTATAAAC+TGG | - | chr5.3:28058593-28058612 | None:intergenic | 25.0% |
| ! | AACACAACTTATTCAATGAT+TGG | - | chr5.3:28057307-28057326 | None:intergenic | 25.0% |
| ! | AACGTCATTATATGATAGAA+AGG | - | chr5.3:28060104-28060123 | None:intergenic | 25.0% |
| ! | AATATCAAATGATACTCTTC+AGG | + | chr5.3:28057787-28057806 | MS.gene91884:CDS | 25.0% |
| ! | AATTTATTGACAATGTTGCT+TGG | + | chr5.3:28057862-28057881 | MS.gene91884:intron | 25.0% |
| ! | ACACAACTTATTCAATGATT+GGG | - | chr5.3:28057306-28057325 | None:intergenic | 25.0% |
| ! | AGAAACTTGAAAATCAAAGA+CGG | - | chr5.3:28057039-28057058 | None:intergenic | 25.0% |
| ! | AGAGATTATGTAGAGAAATA+CGG | + | chr5.3:28058876-28058895 | MS.gene91884:intron | 25.0% |
| ! | ATAAATTTGAATTCCCAAGT+TGG | + | chr5.3:28058760-28058779 | MS.gene91884:intron | 25.0% |
| ! | ATCAAAATGATTTAAGTCGA+TGG | - | chr5.3:28057540-28057559 | None:intergenic | 25.0% |
| ! | ATTTAACCACAATCTAAGTT+TGG | - | chr5.3:28058539-28058558 | None:intergenic | 25.0% |
| ! | ATTTATGTCAAAACTTTGAC+AGG | + | chr5.3:28060592-28060611 | MS.gene91884:intron | 25.0% |
| ! | CGAATATGATATAATTGCTA+TGG | + | chr5.3:28060158-28060177 | MS.gene91884:intron | 25.0% |
| ! | GAAACATTGTCTAATTATAG+CGG | + | chr5.3:28060204-28060223 | MS.gene91884:intron | 25.0% |
| ! | TACTCATTACAATATCTAGA+AGG | + | chr5.3:28060623-28060642 | MS.gene91884:intron | 25.0% |
| ! | TTCTTACAGTATCTTTAGTA+GGG | - | chr5.3:28056971-28056990 | None:intergenic | 25.0% |
| ! | TTTCTATCATATAATGACGT+TGG | + | chr5.3:28060103-28060122 | MS.gene91884:intron | 25.0% |
| !! | AAAAAAACTGCAACTTTTGA+GGG | - | chr5.3:28059423-28059442 | None:intergenic | 25.0% |
| !! | AAGAAATCAAAGTCTTTTCT+TGG | + | chr5.3:28059805-28059824 | MS.gene91884:intron | 25.0% |
| !! | ACGAGGACAAATTTTATAAT+TGG | - | chr5.3:28057641-28057660 | None:intergenic | 25.0% |
| !! | AGAATTTTTGCAAAAAGCTT+TGG | + | chr5.3:28060342-28060361 | MS.gene91884:intron | 25.0% |
| !! | AGATATAAAGTCTTCAAGTT+AGG | - | chr5.3:28057374-28057393 | None:intergenic | 25.0% |
| !! | AGCTAATTCTTTGTTATCTT+CGG | + | chr5.3:28057196-28057215 | MS.gene91884:CDS | 25.0% |
| !! | ATTTATTGACAATGTTGCTT+GGG | + | chr5.3:28057863-28057882 | MS.gene91884:intron | 25.0% |
| !! | GATATAAAGTCTTCAAGTTA+GGG | - | chr5.3:28057373-28057392 | None:intergenic | 25.0% |
| !! | GGACAAATTTTATAATTGGA+TGG | - | chr5.3:28057637-28057656 | None:intergenic | 25.0% |
| !! | TGTTCTATTTCAGATTTTCT+TGG | + | chr5.3:28058279-28058298 | MS.gene91884:CDS | 25.0% |
| !! | TTAGGGAAAATTTAAGATCA+AGG | - | chr5.3:28057238-28057257 | None:intergenic | 25.0% |
| !! | TTTTTCTTATTCTTGGATGA+AGG | + | chr5.3:28058207-28058226 | MS.gene91884:CDS | 25.0% |
| !!! | ACTGGTTTTATACTAGATTT+TGG | + | chr5.3:28059003-28059022 | MS.gene91884:intron | 25.0% |
| !!! | AGTATTTTGCTGTTGATTTT+GGG | - | chr5.3:28057714-28057733 | None:intergenic | 25.0% |
| !!! | TAGTATTTTGCTGTTGATTT+TGG | - | chr5.3:28057715-28057734 | None:intergenic | 25.0% |
| !!! | TGTTTATTGATTCTTGTGTA+GGG | + | chr5.3:28058183-28058202 | MS.gene91884:intron | 25.0% |
| !!! | TTATATTGTTGATTCTAGTG+AGG | - | chr5.3:28058744-28058763 | None:intergenic | 25.0% |
| !!! | TTGTTTATTGATTCTTGTGT+AGG | + | chr5.3:28058182-28058201 | MS.gene91884:intron | 25.0% |
| !!! | TTTTCAAGTTTCTTGTAATC+CGG | + | chr5.3:28057046-28057065 | MS.gene91884:CDS | 25.0% |
| AAAAGACAATATGGCAGTTA+GGG | + | chr5.3:28059473-28059492 | MS.gene91884:CDS | 30.0% | |
| AAAGTTCTATAAACTGGCAT+TGG | - | chr5.3:28058587-28058606 | None:intergenic | 30.0% | |
| AACCAAAACACTTTCCTTAA+CGG | - | chr5.3:28059696-28059715 | None:intergenic | 30.0% | |
| AACTGTTGAACAATCAATCT+AGG | - | chr5.3:28058718-28058737 | None:intergenic | 30.0% | |
| ATATATGTGAAGACTCTTAC+CGG | + | chr5.3:28060691-28060710 | MS.gene91884:CDS | 30.0% | |
| ATCAATACATGCATCAACTA+TGG | - | chr5.3:28057675-28057694 | None:intergenic | 30.0% | |
| CATACTAAATAACGTACAAC+AGG | - | chr5.3:28060185-28060204 | None:intergenic | 30.0% | |
| CATAGTTAAGACACTAGTAA+GGG | - | chr5.3:28057950-28057969 | None:intergenic | 30.0% | |
| GAGATTATGTAGAGAAATAC+GGG | + | chr5.3:28058877-28058896 | MS.gene91884:intron | 30.0% | |
| GATCTACTTAACATTAAAGG+TGG | + | chr5.3:28060732-28060751 | MS.gene91884:CDS | 30.0% | |
| GTACAAAAAGCTGATATTGA+TGG | + | chr5.3:28057167-28057186 | MS.gene91884:CDS | 30.0% | |
| GTTCTTACAGTATCTTTAGT+AGG | - | chr5.3:28056972-28056991 | None:intergenic | 30.0% | |
| TAGAACTTTCACTTTGTGAA+CGG | + | chr5.3:28058598-28058617 | MS.gene91884:intron | 30.0% | |
| TATACAAAGTCAACTCTTGT+AGG | - | chr5.3:28057457-28057476 | None:intergenic | 30.0% | |
| TCAAAGTGGACAGAAAAATT+TGG | - | chr5.3:28059645-28059664 | None:intergenic | 30.0% | |
| TGTCTTGTCAAAAGACAATA+TGG | + | chr5.3:28059464-28059483 | MS.gene91884:CDS | 30.0% | |
| TTCACTCTATATATACCTGA+TGG | + | chr5.3:28057338-28057357 | MS.gene91884:intron | 30.0% | |
| TTTCCACTTTGTAGCTAATA+TGG | - | chr5.3:28056997-28057016 | None:intergenic | 30.0% | |
| ! | CAAAAAAACTGCAACTTTTG+AGG | - | chr5.3:28059424-28059443 | None:intergenic | 30.0% |
| ! | GGAGATCAACAAATTTTGTT+CGG | + | chr5.3:28058357-28058376 | MS.gene91884:intron | 30.0% |
| ! | GTAGGGATTTTTCTTATTCT+TGG | + | chr5.3:28058200-28058219 | MS.gene91884:intron | 30.0% |
| ! | TCTTATAATTGCCTCCTTTT+CGG | + | chr5.3:28059852-28059871 | MS.gene91884:intron | 30.0% |
| ! | TCTTTTATCTTTAAGCTACG+TGG | + | chr5.3:28057610-28057629 | MS.gene91884:CDS | 30.0% |
| ! | TGTATTGATCTTAGGTGTTA+CGG | + | chr5.3:28057686-28057705 | MS.gene91884:CDS | 30.0% |
| ! | TTGATGCATGTATTGATCTT+AGG | + | chr5.3:28057678-28057697 | MS.gene91884:CDS | 30.0% |
| !!! | CAAAAGTTGCAGTTTTTTTG+TGG | + | chr5.3:28059424-28059443 | MS.gene91884:CDS | 30.0% |
| !!! | CTTTGGAGCTTTTGTAAATT+TGG | - | chr5.3:28056873-28056892 | None:intergenic | 30.0% |
| !!! | GGAAAGTGTTTTGGTTAATT+TGG | + | chr5.3:28059700-28059719 | MS.gene91884:intron | 30.0% |
| !!! | GTATTTTGCTGTTGATTTTG+GGG | - | chr5.3:28057713-28057732 | None:intergenic | 30.0% |
| !!! | GTGATCTGTTTCTAACATTT+TGG | + | chr5.3:28060429-28060448 | MS.gene91884:intron | 30.0% |
| AAAATGAGAAGTCAGCTCAA+CGG | + | chr5.3:28057411-28057430 | MS.gene91884:intron | 35.0% | |
| AACAGAATCCACACTTCATT+TGG | + | chr5.3:28060543-28060562 | MS.gene91884:CDS | 35.0% | |
| AACTTTACAGCTTCGATATC+AGG | - | chr5.3:28058312-28058331 | None:intergenic | 35.0% | |
| AAGACATGATATAGGCGATA+TGG | + | chr5.3:28056890-28056909 | MS.gene91884:CDS | 35.0% | |
| AAGATATTCCACGATAGCTA+AGG | - | chr5.3:28060282-28060301 | None:intergenic | 35.0% | |
| AAGCTCCAAAGACATGATAT+AGG | + | chr5.3:28056882-28056901 | MS.gene91884:CDS | 35.0% | |
| AAGTGGACAGAAAAATTTGG+TGG | - | chr5.3:28059642-28059661 | None:intergenic | 35.0% | |
| AATACATGCATCAACTATGG+AGG | - | chr5.3:28057672-28057691 | None:intergenic | 35.0% | |
| AATATGAAGAAGAACAGCCT+CGG | - | chr5.3:28056937-28056956 | None:intergenic | 35.0% | |
| AATTGCAACATTTATGCCAG+GGG | + | chr5.3:28058425-28058444 | MS.gene91884:intron | 35.0% | |
| ACAGCAAAGTAATTGGAGAA+CGG | + | chr5.3:28060493-28060512 | MS.gene91884:intron | 35.0% | |
| ACCTAGCAAATGTACAGTTT+AGG | - | chr5.3:28057256-28057275 | None:intergenic | 35.0% | |
| AGATGCGTCAAATTGAAGAA+CGG | - | chr5.3:28057999-28058018 | None:intergenic | 35.0% | |
| ATATCATATTCGACAGCAGT+CGG | - | chr5.3:28060150-28060169 | None:intergenic | 35.0% | |
| ATGCAATGGTATGGTCAATT+TGG | + | chr5.3:28059724-28059743 | MS.gene91884:intron | 35.0% | |
| ATGTGAAGAACTTCCAGATT+AGG | - | chr5.3:28058086-28058105 | None:intergenic | 35.0% | |
| ATGTTGCAATTTCCACACTA+AGG | + | chr5.3:28057507-28057526 | MS.gene91884:intron | 35.0% | |
| ATTCTCATGTGTTTCGTACT+TGG | + | chr5.3:28059375-28059394 | MS.gene91884:intron | 35.0% | |
| ATTGACTATGCAGTTTGTGT+GGG | + | chr5.3:28059519-28059538 | MS.gene91884:CDS | 35.0% | |
| ATTGAGCTATTGAGTCGATT+AGG | + | chr5.3:28057746-28057765 | MS.gene91884:CDS | 35.0% | |
| CAAAAGACAATATGGCAGTT+AGG | + | chr5.3:28059472-28059491 | MS.gene91884:CDS | 35.0% | |
| CAATTGAATCCTTACTTTCC+CGG | - | chr5.3:28060713-28060732 | None:intergenic | 35.0% | |
| CAATTGCAACATTTATGCCA+GGG | + | chr5.3:28058424-28058443 | MS.gene91884:intron | 35.0% | |
| CACAAAATTGTTGCCAACTT+GGG | - | chr5.3:28058776-28058795 | None:intergenic | 35.0% | |
| CCTAGCAAATGTACAGTTTA+GGG | - | chr5.3:28057255-28057274 | None:intergenic | 35.0% | |
| CTACAAAGTGGAAATACTTG+TGG | + | chr5.3:28057003-28057022 | MS.gene91884:CDS | 35.0% | |
| CTTATTCTTGGATGAAGGAT+GGG | + | chr5.3:28058212-28058231 | MS.gene91884:CDS | 35.0% | |
| CTTCACATTCAACCAAAACT+AGG | - | chr5.3:28060014-28060033 | None:intergenic | 35.0% | |
| CTTCCATATTAGCTACAAAG+TGG | + | chr5.3:28056991-28057010 | MS.gene91884:CDS | 35.0% | |
| GAAGGAATCTACTTTGCATA+TGG | + | chr5.3:28060641-28060660 | MS.gene91884:intron | 35.0% | |
| GAATGCAAAGTCTTTCTACA+TGG | - | chr5.3:28057145-28057164 | None:intergenic | 35.0% | |
| GCATAGTTAAGACACTAGTA+AGG | - | chr5.3:28057951-28057970 | None:intergenic | 35.0% | |
| GGAAGTTCTTCACATTTCTA+AGG | + | chr5.3:28058091-28058110 | MS.gene91884:CDS | 35.0% | |
| GTTAGAAAATGCCAGTCTTA+GGG | + | chr5.3:28058335-28058354 | MS.gene91884:intron | 35.0% | |
| TAATGACGTTGGACATGTAT+TGG | + | chr5.3:28060114-28060133 | MS.gene91884:intron | 35.0% | |
| TAATTTGGCATGCAATGGTA+TGG | + | chr5.3:28059715-28059734 | MS.gene91884:intron | 35.0% | |
| TATATGTGAAGACTCTTACC+GGG | + | chr5.3:28060692-28060711 | MS.gene91884:CDS | 35.0% | |
| TATCGCCTATATCATGTCTT+TGG | - | chr5.3:28056890-28056909 | None:intergenic | 35.0% | |
| TATGATTAGTGAATTACCCG+AGG | + | chr5.3:28056917-28056936 | MS.gene91884:CDS | 35.0% | |
| TCAATTGCAACATTTATGCC+AGG | + | chr5.3:28058423-28058442 | MS.gene91884:intron | 35.0% | |
| TCACAAAATTGTTGCCAACT+TGG | - | chr5.3:28058777-28058796 | None:intergenic | 35.0% | |
| TCTATTTCGGAGCAAAAGAA+GGG | + | chr5.3:28059080-28059099 | MS.gene91884:intron | 35.0% | |
| TCTTATTCTTGGATGAAGGA+TGG | + | chr5.3:28058211-28058230 | MS.gene91884:CDS | 35.0% | |
| TGGGATGCTGAGAAATTATT+GGG | - | chr5.3:28057287-28057306 | None:intergenic | 35.0% | |
| TGTTAGAAAATGCCAGTCTT+AGG | + | chr5.3:28058334-28058353 | MS.gene91884:intron | 35.0% | |
| TTACTATTAGCCGTGAAACA+TGG | - | chr5.3:28058142-28058161 | None:intergenic | 35.0% | |
| TTAGAAAATGCCAGTCTTAG+GGG | + | chr5.3:28058336-28058355 | MS.gene91884:intron | 35.0% | |
| TTCTATTTCGGAGCAAAAGA+AGG | + | chr5.3:28059079-28059098 | MS.gene91884:intron | 35.0% | |
| TTGGGATGCTGAGAAATTAT+TGG | - | chr5.3:28057288-28057307 | None:intergenic | 35.0% | |
| ! | AAAGTCTTTTCTTGGAGATG+GGG | + | chr5.3:28059813-28059832 | MS.gene91884:intron | 35.0% |
| ! | AGATTTTGTAGAGTGGAATC+TGG | + | chr5.3:28058904-28058923 | MS.gene91884:intron | 35.0% |
| ! | ATGGAGAATGAGAATTTTGC+AGG | + | chr5.3:28059178-28059197 | MS.gene91884:intron | 35.0% |
| ! | ATTTTGTAGAGTGGAATCTG+GGG | + | chr5.3:28058906-28058925 | MS.gene91884:intron | 35.0% |
| ! | CAAAGTCTTTTCTTGGAGAT+GGG | + | chr5.3:28059812-28059831 | MS.gene91884:intron | 35.0% |
| ! | GATTTTGTAGAGTGGAATCT+GGG | + | chr5.3:28058905-28058924 | MS.gene91884:intron | 35.0% |
| ! | GTTTCGTACTTGGTAGTATT+TGG | + | chr5.3:28059385-28059404 | MS.gene91884:intron | 35.0% |
| ! | TCAAAGTCTTTTCTTGGAGA+TGG | + | chr5.3:28059811-28059830 | MS.gene91884:intron | 35.0% |
| ! | TCAATTTGGAACGCAAGAAA+TGG | + | chr5.3:28059738-28059757 | MS.gene91884:intron | 35.0% |
| ! | TTGGTTAATTTGGCATGCAA+TGG | + | chr5.3:28059710-28059729 | MS.gene91884:intron | 35.0% |
| ! | TTTGGTTTAGTGTGTTTCAG+CGG | + | chr5.3:28059595-28059614 | MS.gene91884:intron | 35.0% |
| !! | ACTATTGTTTCTGCAATCAG+CGG | + | chr5.3:28060249-28060268 | MS.gene91884:intron | 35.0% |
| !! | TACTTTGCATATGGTTTTGC+AGG | + | chr5.3:28060650-28060669 | MS.gene91884:intron | 35.0% |
| !! | TCACCGGTTGTTTTCTATTT+CGG | + | chr5.3:28059067-28059086 | MS.gene91884:intron | 35.0% |
| !! | TGAATGTGAAGGTTTTGTGT+TGG | + | chr5.3:28060023-28060042 | MS.gene91884:CDS | 35.0% |
| !!! | CTAGATTTTGGTTAGATGTG+TGG | + | chr5.3:28059015-28059034 | MS.gene91884:intron | 35.0% |
| !!! | CTAGTTTTGGTTGAATGTGA+AGG | + | chr5.3:28060012-28060031 | MS.gene91884:CDS | 35.0% |
| !!! | TCAGTTGTTCTTGCGTTTTT+TGG | + | chr5.3:28059934-28059953 | MS.gene91884:CDS | 35.0% |
| AAAGTCAACTCTTGTAGGAC+AGG | - | chr5.3:28057452-28057471 | None:intergenic | 40.0% | |
| AAATTGCCTCATAGATCAGG+TGG | + | chr5.3:28057097-28057116 | MS.gene91884:CDS | 40.0% | |
| AAGTCAACTCTTGTAGGACA+GGG | - | chr5.3:28057451-28057470 | None:intergenic | 40.0% | |
| AATCACTCCAAGCACTTACA+AGG | - | chr5.3:28059891-28059910 | None:intergenic | 40.0% | |
| AATGCCTGCTAATACTTCAC+TGG | - | chr5.3:28058051-28058070 | None:intergenic | 40.0% | |
| AGAGAAGATGTGAAACACCA+AGG | - | chr5.3:28058252-28058271 | None:intergenic | 40.0% | |
| AGTTAGGGTTGTTATCCTAG+TGG | + | chr5.3:28059488-28059507 | MS.gene91884:CDS | 40.0% | |
| ATATGAAGAAGAACAGCCTC+GGG | - | chr5.3:28056936-28056955 | None:intergenic | 40.0% | |
| ATGCATCAACTATGGAGGTA+GGG | - | chr5.3:28057667-28057686 | None:intergenic | 40.0% | |
| CAAACACTACCAAACACATC+TGG | - | chr5.3:28059266-28059285 | None:intergenic | 40.0% | |
| CATCGAATTCAGAACAAGCT+GGG | - | chr5.3:28060369-28060388 | None:intergenic | 40.0% | |
| CCCTAAACTGTACATTTGCT+AGG | + | chr5.3:28057252-28057271 | MS.gene91884:CDS | 40.0% | |
| GATTGACTATGCAGTTTGTG+TGG | + | chr5.3:28059518-28059537 | MS.gene91884:CDS | 40.0% | |
| GCATCACCAAACTTAGATTG+TGG | + | chr5.3:28058530-28058549 | MS.gene91884:intron | 40.0% | |
| GCTCCGAAATAGAAAACAAC+CGG | - | chr5.3:28059073-28059092 | None:intergenic | 40.0% | |
| GCTTCTTCTACCATGTTTCA+CGG | + | chr5.3:28058129-28058148 | MS.gene91884:intron | 40.0% | |
| GGAAAATTGCCTCATAGATC+AGG | + | chr5.3:28057094-28057113 | MS.gene91884:CDS | 40.0% | |
| GGGCATCAAATTCATTTCCT+TGG | + | chr5.3:28058232-28058251 | MS.gene91884:CDS | 40.0% | |
| GTAAGTGCTTGGAGTGATTT+GGG | + | chr5.3:28059892-28059911 | MS.gene91884:intron | 40.0% | |
| GTTAGGGTTGTTATCCTAGT+GGG | + | chr5.3:28059489-28059508 | MS.gene91884:CDS | 40.0% | |
| TAAGTGCTTGGAGTGATTTG+GGG | + | chr5.3:28059893-28059912 | MS.gene91884:intron | 40.0% | |
| TATTGGAGGGGTAGATATGA+TGG | + | chr5.3:28058971-28058990 | MS.gene91884:intron | 40.0% | |
| TCAAGTGTTAAGTCAGCTAG+AGG | + | chr5.3:28058831-28058850 | MS.gene91884:intron | 40.0% | |
| TCAGACACGTTCAGAAATGT+CGG | + | chr5.3:28060055-28060074 | MS.gene91884:CDS | 40.0% | |
| TCCACTTTGAATGTTCGAGT+GGG | + | chr5.3:28059655-28059674 | MS.gene91884:intron | 40.0% | |
| TCCTGTGTTTATGGGTAGAT+GGG | + | chr5.3:28059966-28059985 | MS.gene91884:CDS | 40.0% | |
| TGTAAGTGCTTGGAGTGATT+TGG | + | chr5.3:28059891-28059910 | MS.gene91884:intron | 40.0% | |
| TTAGATTAGGAAGGATCCCT+TGG | + | chr5.3:28059773-28059792 | MS.gene91884:intron | 40.0% | |
| TTAGGGAAACGTATACCATC+AGG | - | chr5.3:28057356-28057375 | None:intergenic | 40.0% | |
| TTAGGGTTGTTATCCTAGTG+GGG | + | chr5.3:28059490-28059509 | MS.gene91884:CDS | 40.0% | |
| TTCCTGTGTTTATGGGTAGA+TGG | + | chr5.3:28059965-28059984 | MS.gene91884:CDS | 40.0% | |
| TTCTGTATTGTTCTTCGTGC+TGG | + | chr5.3:28058940-28058959 | MS.gene91884:intron | 40.0% | |
| TTGACTATGCAGTTTGTGTG+GGG | + | chr5.3:28059520-28059539 | MS.gene91884:CDS | 40.0% | |
| TTTCCACAAGACTCCTAATC+TGG | + | chr5.3:28058070-28058089 | MS.gene91884:CDS | 40.0% | |
| ! | ATAATTGCCTCCTTTTCGGA+TGG | + | chr5.3:28059856-28059875 | MS.gene91884:intron | 40.0% |
| ! | GGCGATGTGTCATTAAGTTT+CGG | + | chr5.3:28058446-28058465 | MS.gene91884:intron | 40.0% |
| ! | GGGAAAGAGATTTTGTAGAG+TGG | + | chr5.3:28058897-28058916 | MS.gene91884:intron | 40.0% |
| ! | TTAGTGTGTTTCAGCGGTTT+TGG | + | chr5.3:28059601-28059620 | MS.gene91884:intron | 40.0% |
| ! | TTGAAGCACCAAATGAAGTG+TGG | - | chr5.3:28060554-28060573 | None:intergenic | 40.0% |
| !! | AGCTGACTTCTCATTTTCGA+AGG | - | chr5.3:28057408-28057427 | None:intergenic | 40.0% |
| !! | CATTTGGTGCTTCAATTGAG+AGG | + | chr5.3:28060559-28060578 | MS.gene91884:CDS | 40.0% |
| !! | GGTCTTATTGTCTTTACTGC+AGG | + | chr5.3:28059199-28059218 | MS.gene91884:intron | 40.0% |
| !! | GTTGATAACCTTAGCTATCG+TGG | + | chr5.3:28060271-28060290 | MS.gene91884:intron | 40.0% |
| !! | TAAGTCAGCTAGAGGCATTA+GGG | + | chr5.3:28058839-28058858 | MS.gene91884:intron | 40.0% |
| !! | TGTTCTGGCTTTGATACATC+CGG | - | chr5.3:28057068-28057087 | None:intergenic | 40.0% |
| !! | TTAAGTCAGCTAGAGGCATT+AGG | + | chr5.3:28058838-28058857 | MS.gene91884:intron | 40.0% |
| !! | TTCGGTGTTCCTGTGTTTAT+GGG | + | chr5.3:28059958-28059977 | MS.gene91884:CDS | 40.0% |
| !! | TTTTGGTTAGATGTGTGGAC+AGG | + | chr5.3:28059020-28059039 | MS.gene91884:intron | 40.0% |
| !!! | AGCCGTTAAGGAAAGTGTTT+TGG | + | chr5.3:28059691-28059710 | MS.gene91884:intron | 40.0% |
| !!! | GTTCTTGCGTTTTTTGGCTT+CGG | + | chr5.3:28059940-28059959 | MS.gene91884:CDS | 40.0% |
| ACCCACTCGAACATTCAAAG+TGG | - | chr5.3:28059659-28059678 | None:intergenic | 45.0% | |
| AGACTCTTACCGGGAAAGTA+AGG | + | chr5.3:28060701-28060720 | MS.gene91884:CDS | 45.0% | |
| AGGCATTAGGGGAGAAATAC+AGG | + | chr5.3:28058851-28058870 | MS.gene91884:intron | 45.0% | |
| AGGGGTAGATATGATGGCAA+GGG | + | chr5.3:28058977-28058996 | MS.gene91884:intron | 45.0% | |
| ATCAAAGCCAGAACAGGAGT+CGG | + | chr5.3:28057073-28057092 | MS.gene91884:CDS | 45.0% | |
| ATTTCTTTCGCCACCTCCAA+GGG | - | chr5.3:28059792-28059811 | None:intergenic | 45.0% | |
| CATGCATCAACTATGGAGGT+AGG | - | chr5.3:28057668-28057687 | None:intergenic | 45.0% | |
| CCATCGAATTCAGAACAAGC+TGG | - | chr5.3:28060370-28060389 | None:intergenic | 45.0% | |
| CCTGCTAATACTTCACTGGT+GGG | - | chr5.3:28058047-28058066 | None:intergenic | 45.0% | |
| CCTGTGTTTATGGGTAGATG+GGG | + | chr5.3:28059967-28059986 | MS.gene91884:CDS | 45.0% | |
| CGGTGAAAACTCTCGCTTAA+CGG | - | chr5.3:28059053-28059072 | None:intergenic | 45.0% | |
| CTGCGAATACGCAAATCACT+TGG | - | chr5.3:28057563-28057582 | None:intergenic | 45.0% | |
| CTGCTAATACTTCACTGGTG+GGG | - | chr5.3:28058046-28058065 | None:intergenic | 45.0% | |
| CTGGTGGAAAGATATTGGAG+GGG | + | chr5.3:28058959-28058978 | MS.gene91884:intron | 45.0% | |
| CTTCCAGATTAGGAGTCTTG+TGG | - | chr5.3:28058076-28058095 | None:intergenic | 45.0% | |
| GAATGAGGAAAGGTGAGGTT+TGG | + | chr5.3:28059120-28059139 | MS.gene91884:intron | 45.0% | |
| GATGGTCAACTTCCTTAGTG+TGG | - | chr5.3:28057522-28057541 | None:intergenic | 45.0% | |
| GCAAGTTTGCAGCAATGGTT+TGG | + | chr5.3:28059577-28059596 | MS.gene91884:intron | 45.0% | |
| GCTGGTGGAAAGATATTGGA+GGG | + | chr5.3:28058958-28058977 | MS.gene91884:intron | 45.0% | |
| GGATGTATCAAAGCCAGAAC+AGG | + | chr5.3:28057067-28057086 | MS.gene91884:CDS | 45.0% | |
| GTCCACTTTGAATGTTCGAG+TGG | + | chr5.3:28059654-28059673 | MS.gene91884:intron | 45.0% | |
| GTGGGGTAAAAATACCCCAA+GGG | - | chr5.3:28058029-28058048 | None:intergenic | 45.0% | |
| GTTAGATGTGTGGACAGGTT+TGG | + | chr5.3:28059025-28059044 | MS.gene91884:intron | 45.0% | |
| GTTTGTCCACCTGATCTATG+AGG | - | chr5.3:28057106-28057125 | None:intergenic | 45.0% | |
| TAGGGTTGTTATCCTAGTGG+GGG | + | chr5.3:28059491-28059510 | MS.gene91884:CDS | 45.0% | |
| TCACTGCAAGTTTGCAGCAA+TGG | + | chr5.3:28059572-28059591 | MS.gene91884:CDS | 45.0% | |
| TGCGTCAAATTGAAGAACGG+AGG | - | chr5.3:28057996-28058015 | None:intergenic | 45.0% | |
| TGCTGGTGGAAAGATATTGG+AGG | + | chr5.3:28058957-28058976 | MS.gene91884:intron | 45.0% | |
| TGTATTGTTCTTCGTGCTGG+TGG | + | chr5.3:28058943-28058962 | MS.gene91884:intron | 45.0% | |
| TTCGGAGCAAAAGAAGGGTA+CGG | + | chr5.3:28059085-28059104 | MS.gene91884:intron | 45.0% | |
| TTGGGATCCTTGTAAGTGCT+TGG | + | chr5.3:28059881-28059900 | MS.gene91884:intron | 45.0% | |
| TTGTTGATCTCCCCTAAGAC+TGG | - | chr5.3:28058349-28058368 | None:intergenic | 45.0% | |
| ! | AAGTGCTTGGAGTGATTTGG+GGG | + | chr5.3:28059894-28059913 | MS.gene91884:intron | 45.0% |
| ! | CAATTTTCCGACTCCTGTTC+TGG | - | chr5.3:28057083-28057102 | None:intergenic | 45.0% |
| ! | CCAGCTTGTTCTGAATTCGA+TGG | + | chr5.3:28060367-28060386 | MS.gene91884:intron | 45.0% |
| ! | CGTTAAGCGAGAGTTTTCAC+CGG | + | chr5.3:28059051-28059070 | MS.gene91884:intron | 45.0% |
| ! | TCGTGCTGGTGGAAAGATAT+TGG | + | chr5.3:28058954-28058973 | MS.gene91884:intron | 45.0% |
| ! | TTGGTGCTTCAATTGAGAGG+TGG | + | chr5.3:28060562-28060581 | MS.gene91884:intron | 45.0% |
| !! | AAGTCAGCTAGAGGCATTAG+GGG | + | chr5.3:28058840-28058859 | MS.gene91884:intron | 45.0% |
| !! | CATATGGTTTTGCAGGTTCG+TGG | + | chr5.3:28060657-28060676 | MS.gene91884:intron | 45.0% |
| !! | CTTCGGTGTTCCTGTGTTTA+TGG | + | chr5.3:28059957-28059976 | MS.gene91884:CDS | 45.0% |
| !! | TTGGTAGTGTTTGTCCACAG+AGG | + | chr5.3:28059273-28059292 | MS.gene91884:CDS | 45.0% |
| !!! | GGAGTCTTTTTGGTTAGCAG+AGG | + | chr5.3:28059988-28060007 | MS.gene91884:CDS | 45.0% |
| !!! | TCAGCGGTTTTGGTTGTTTC+TGG | + | chr5.3:28059611-28059630 | MS.gene91884:intron | 45.0% |
| ACGCATCTTGATGTGCCCTT+GGG | + | chr5.3:28058011-28058030 | MS.gene91884:CDS | 50.0% | |
| ACTTAATGACACATCGCCCC+TGG | - | chr5.3:28058444-28058463 | None:intergenic | 50.0% | |
| AGCGAGGTGAGAATGAGGAA+AGG | + | chr5.3:28059110-28059129 | MS.gene91884:intron | 50.0% | |
| AGGGTTGTTATCCTAGTGGG+GGG | + | chr5.3:28059492-28059511 | MS.gene91884:CDS | 50.0% | |
| ATCCACGGAGGAGGATGTTT+GGG | + | chr5.3:28059232-28059251 | MS.gene91884:CDS | 50.0% | |
| CCCCATCTACCCATAAACAC+AGG | - | chr5.3:28059970-28059989 | None:intergenic | 50.0% | |
| CTATGCAGTTTGTGTGGGGA+AGG | + | chr5.3:28059524-28059543 | MS.gene91884:CDS | 50.0% | |
| CTATGGAGGTAGGGTTAACG+AGG | - | chr5.3:28057658-28057677 | None:intergenic | 50.0% | |
| CTGCGTGATGTAAGCCGTTA+AGG | + | chr5.3:28059679-28059698 | MS.gene91884:intron | 50.0% | |
| GAGGGGTAGATATGATGGCA+AGG | + | chr5.3:28058976-28058995 | MS.gene91884:intron | 50.0% | |
| GATCCCAACACCATCCGAAA+AGG | - | chr5.3:28059869-28059888 | None:intergenic | 50.0% | |
| GATTAGGAAGGATCCCTTGG+AGG | + | chr5.3:28059776-28059795 | MS.gene91884:intron | 50.0% | |
| GATTTCTTTCGCCACCTCCA+AGG | - | chr5.3:28059793-28059812 | None:intergenic | 50.0% | |
| GCAGGCTGTGCATTTATCCA+CGG | + | chr5.3:28059217-28059236 | MS.gene91884:intron | 50.0% | |
| GCCTGCTAATACTTCACTGG+TGG | - | chr5.3:28058048-28058067 | None:intergenic | 50.0% | |
| GGCATAGGAGGTTGTTCGAA+TGG | + | chr5.3:28059159-28059178 | MS.gene91884:intron | 50.0% | |
| GGTGAGAATGAGGAAAGGTG+AGG | + | chr5.3:28059115-28059134 | MS.gene91884:intron | 50.0% | |
| GGTGGGGTAAAAATACCCCA+AGG | - | chr5.3:28058030-28058049 | None:intergenic | 50.0% | |
| GTAGTGTTTGTCCACAGAGG+AGG | + | chr5.3:28059276-28059295 | MS.gene91884:CDS | 50.0% | |
| TATCCACGGAGGAGGATGTT+TGG | + | chr5.3:28059231-28059250 | MS.gene91884:CDS | 50.0% | |
| TCTTGGAGATGGGGATTGAG+CGG | + | chr5.3:28059822-28059841 | MS.gene91884:intron | 50.0% | |
| TGAGGAAAGGTGAGGTTTGG+AGG | + | chr5.3:28059123-28059142 | MS.gene91884:intron | 50.0% | |
| TGTCCACAGAGGAGGTTGTT+CGG | + | chr5.3:28059284-28059303 | MS.gene91884:intron | 50.0% | |
| TGTGCATTTATCCACGGAGG+AGG | + | chr5.3:28059223-28059242 | MS.gene91884:CDS | 50.0% | |
| TTTGGAGGTGGTCGTTCACT+TGG | + | chr5.3:28059138-28059157 | MS.gene91884:intron | 50.0% | |
| ! | ATATGATGGCAAGGGAGCAC+TGG | + | chr5.3:28058985-28059004 | MS.gene91884:intron | 50.0% |
| ! | CAGCTCAACGGCTTTTGTCT+GGG | + | chr5.3:28057423-28057442 | MS.gene91884:intron | 50.0% |
| ! | CCCACCAGTGAAGTATTAGC+AGG | + | chr5.3:28058044-28058063 | MS.gene91884:CDS | 50.0% |
| ! | CCTCCTTTTCGGATGGTGTT+GGG | + | chr5.3:28059863-28059882 | MS.gene91884:intron | 50.0% |
| ! | GAGGAGGATGTTTGGGTTTG+GGG | + | chr5.3:28059239-28059258 | MS.gene91884:CDS | 50.0% |
| ! | GGAGGAGGATGTTTGGGTTT+GGG | + | chr5.3:28059238-28059257 | MS.gene91884:CDS | 50.0% |
| ! | GGGTAGATGGGGAGTCTTTT+TGG | + | chr5.3:28059978-28059997 | MS.gene91884:CDS | 50.0% |
| ! | GGTTAGCAGAGGCCTAGTTT+TGG | + | chr5.3:28059999-28060018 | MS.gene91884:CDS | 50.0% |
| ! | GTTTGGGGTCCAGATGTGTT+TGG | + | chr5.3:28059254-28059273 | MS.gene91884:CDS | 50.0% |
| ! | TCAGCTCAACGGCTTTTGTC+TGG | + | chr5.3:28057422-28057441 | MS.gene91884:intron | 50.0% |
| !! | ATGGTTTTGCAGGTTCGTGG+TGG | + | chr5.3:28060660-28060679 | MS.gene91884:intron | 50.0% |
| AACCCAAACATCCTCCTCCG+TGG | - | chr5.3:28059237-28059256 | None:intergenic | 55.0% | |
| AGTCAATCGAACCCCCCACT+AGG | - | chr5.3:28059506-28059525 | None:intergenic | 55.0% | |
| CCCAACACCATCCGAAAAGG+AGG | - | chr5.3:28059866-28059885 | None:intergenic | 55.0% | |
| CGCATCTTGATGTGCCCTTG+GGG | + | chr5.3:28058012-28058031 | MS.gene91884:CDS | 55.0% | |
| CTTGGAGATGGGGATTGAGC+GGG | + | chr5.3:28059823-28059842 | MS.gene91884:intron | 55.0% | |
| GACGCATCTTGATGTGCCCT+TGG | + | chr5.3:28058010-28058029 | MS.gene91884:CDS | 55.0% | |
| GGAAAGGTGAGGTTTGGAGG+TGG | + | chr5.3:28059126-28059145 | MS.gene91884:intron | 55.0% | |
| GGCTGTGCATTTATCCACGG+AGG | + | chr5.3:28059220-28059239 | MS.gene91884:intron | 55.0% | |
| GGTCGTTCACTTGGCATAGG+AGG | + | chr5.3:28059147-28059166 | MS.gene91884:intron | 55.0% | |
| GGTGGTCGTTCACTTGGCAT+AGG | + | chr5.3:28059144-28059163 | MS.gene91884:intron | 55.0% | |
| GTAGAGTGGAATCTGGGGAG+AGG | + | chr5.3:28058911-28058930 | MS.gene91884:intron | 55.0% | |
| GTCCACAGAGGAGGTTGTTC+GGG | + | chr5.3:28059285-28059304 | MS.gene91884:intron | 55.0% | |
| TAGGAAGGATCCCTTGGAGG+TGG | + | chr5.3:28059779-28059798 | MS.gene91884:intron | 55.0% | |
| TGCAGTTTGTGTGGGGAAGG+TGG | + | chr5.3:28059527-28059546 | MS.gene91884:CDS | 55.0% | |
| ! | AAAGAAGGGTACGGTGAGCG+AGG | + | chr5.3:28059094-28059113 | MS.gene91884:intron | 55.0% |
| ! | CGGAGGAGGATGTTTGGGTT+TGG | + | chr5.3:28059237-28059256 | MS.gene91884:CDS | 55.0% |
| ! | CTTGGAGTGATTTGGGGGTG+GGG | + | chr5.3:28059899-28059918 | MS.gene91884:intron | 55.0% |
| ! | GCCTCCTTTTCGGATGGTGT+TGG | + | chr5.3:28059862-28059881 | MS.gene91884:intron | 55.0% |
| ! | GCTTGGAGTGATTTGGGGGT+GGG | + | chr5.3:28059898-28059917 | MS.gene91884:intron | 55.0% |
| ! | TGCTTGGAGTGATTTGGGGG+TGG | + | chr5.3:28059897-28059916 | MS.gene91884:intron | 55.0% |
| ! | TTGGAGTGATTTGGGGGTGG+GGG | + | chr5.3:28059900-28059919 | MS.gene91884:intron | 55.0% |
| CACAGAGGAGGTTGTTCGGG+TGG | + | chr5.3:28059288-28059307 | MS.gene91884:intron | 60.0% | |
| CACCCGAACAACCTCCTCTG+TGG | - | chr5.3:28059290-28059309 | None:intergenic | 60.0% | |
| CGGTGAGCGAGGTGAGAATG+AGG | + | chr5.3:28059105-28059124 | MS.gene91884:intron | 60.0% | |
| GGAGAACGGTCGCATGCTTG+CGG | + | chr5.3:28060507-28060526 | MS.gene91884:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 28056861 | 28060762 | 28056861 | ID=MS.gene91884 |
| chr5.3 | mRNA | 28056861 | 28060762 | 28056861 | ID=MS.gene91884.t1;Parent=MS.gene91884 |
| chr5.3 | exon | 28056861 | 28057273 | 28056861 | ID=MS.gene91884.t1.exon1;Parent=MS.gene91884.t1 |
| chr5.3 | CDS | 28056861 | 28057273 | 28056861 | ID=cds.MS.gene91884.t1;Parent=MS.gene91884.t1 |
| chr5.3 | exon | 28057529 | 28057808 | 28057529 | ID=MS.gene91884.t1.exon2;Parent=MS.gene91884.t1 |
| chr5.3 | CDS | 28057529 | 28057808 | 28057529 | ID=cds.MS.gene91884.t1;Parent=MS.gene91884.t1 |
| chr5.3 | exon | 28057957 | 28058112 | 28057957 | ID=MS.gene91884.t1.exon3;Parent=MS.gene91884.t1 |
| chr5.3 | CDS | 28057957 | 28058112 | 28057957 | ID=cds.MS.gene91884.t1;Parent=MS.gene91884.t1 |
| chr5.3 | exon | 28058204 | 28058323 | 28058204 | ID=MS.gene91884.t1.exon4;Parent=MS.gene91884.t1 |
| chr5.3 | CDS | 28058204 | 28058323 | 28058204 | ID=cds.MS.gene91884.t1;Parent=MS.gene91884.t1 |
| chr5.3 | exon | 28059221 | 28059297 | 28059221 | ID=MS.gene91884.t1.exon5;Parent=MS.gene91884.t1 |
| chr5.3 | CDS | 28059221 | 28059297 | 28059221 | ID=cds.MS.gene91884.t1;Parent=MS.gene91884.t1 |
| chr5.3 | exon | 28059401 | 28059593 | 28059401 | ID=MS.gene91884.t1.exon6;Parent=MS.gene91884.t1 |
| chr5.3 | CDS | 28059401 | 28059593 | 28059401 | ID=cds.MS.gene91884.t1;Parent=MS.gene91884.t1 |
| chr5.3 | exon | 28059928 | 28060076 | 28059928 | ID=MS.gene91884.t1.exon7;Parent=MS.gene91884.t1 |
| chr5.3 | CDS | 28059928 | 28060076 | 28059928 | ID=cds.MS.gene91884.t1;Parent=MS.gene91884.t1 |
| chr5.3 | exon | 28060497 | 28060580 | 28060497 | ID=MS.gene91884.t1.exon8;Parent=MS.gene91884.t1 |
| chr5.3 | CDS | 28060497 | 28060580 | 28060497 | ID=cds.MS.gene91884.t1;Parent=MS.gene91884.t1 |
| chr5.3 | exon | 28060672 | 28060762 | 28060672 | ID=MS.gene91884.t1.exon9;Parent=MS.gene91884.t1 |
| chr5.3 | CDS | 28060672 | 28060762 | 28060672 | ID=cds.MS.gene91884.t1;Parent=MS.gene91884.t1 |
| Gene Sequence |
| Protein sequence |
