AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96357


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96357.t1 MTR_3g048290 70.236 467 125 4 1 453 1 467 0.0 630
MS.gene96357.t1 MTR_4g080787 69.017 468 128 4 1 453 1 466 0.0 607
MS.gene96357.t1 MTR_4g080773 64.668 467 147 4 1 450 1 466 0.0 561
MS.gene96357.t1 MTR_4g080773 64.668 467 147 4 1 450 1 466 0.0 561
MS.gene96357.t1 MTR_4g080807 57.939 359 110 3 93 444 1 325 9.69e-127 376
MS.gene96357.t1 MTR_4g080590 48.366 459 216 8 1 448 1 449 8.66e-118 355
MS.gene96357.t1 MTR_5g039950 45.752 459 200 8 1 450 1 419 8.12e-112 338
MS.gene96357.t1 MTR_4g130200 43.488 453 191 5 1 450 1 391 2.68e-100 308
MS.gene96357.t1 MTR_7g023310 45.416 469 224 13 1 450 1 456 5.47e-98 304
MS.gene96357.t1 MTR_4g080590 49.067 375 170 8 1 364 1 365 6.47e-92 286
MS.gene96357.t1 MTR_7g039630 45.000 380 156 7 1 364 1 343 2.39e-86 270
MS.gene96357.t1 MTR_5g039970 50.309 324 146 5 5 315 1 322 1.40e-83 263
MS.gene96357.t1 MTR_2g094750 46.791 374 159 13 22 360 92 460 5.11e-75 245
MS.gene96357.t1 MTR_4g081030 37.961 461 201 12 1 450 1 387 2.94e-74 240
MS.gene96357.t1 MTR_7g023330 39.130 460 198 13 6 450 3 395 1.35e-73 239
MS.gene96357.t1 MTR_2g072530 27.273 451 294 14 20 452 13 447 1.66e-30 124
MS.gene96357.t1 MTR_8g467800 27.679 448 272 14 12 430 12 436 2.64e-29 120
MS.gene96357.t1 MTR_4g080813 64.706 85 27 1 5 86 1 85 8.04e-29 110
MS.gene96357.t1 MTR_8g062270 28.889 450 262 17 20 434 16 442 3.43e-27 114
MS.gene96357.t1 MTR_5g080710 26.450 431 292 12 12 436 27 438 5.72e-26 110
MS.gene96357.t1 MTR_5g005690 25.400 437 276 8 24 419 25 452 2.16e-25 109
MS.gene96357.t1 MTR_5g084070 28.438 429 250 13 11 419 4 395 1.05e-24 107
MS.gene96357.t1 MTR_2g094450 38.043 184 89 6 198 371 31 199 3.96e-23 97.4
MS.gene96357.t1 MTR_8g467800 29.180 305 198 8 12 307 12 307 1.42e-22 99.4
MS.gene96357.t1 MTR_7g094030 26.247 461 255 16 19 433 27 448 2.24e-22 100
MS.gene96357.t1 MTR_4g032730 26.185 443 264 16 20 419 15 437 5.00e-22 99.4
MS.gene96357.t1 MTR_4g032845 28.266 421 264 17 18 416 1 405 9.09e-22 98.2
MS.gene96357.t1 MTR_8g468840 28.605 423 272 16 15 418 9 420 7.89e-20 92.4
MS.gene96357.t1 MTR_3g107100 26.969 419 215 16 19 418 10 356 9.14e-20 92.0
MS.gene96357.t1 MTR_2g072720 26.490 453 287 17 11 438 31 462 1.94e-19 91.7
MS.gene96357.t1 MTR_1g082260 36.076 158 98 1 71 225 18 175 2.87e-19 85.9
MS.gene96357.t1 MTR_1g115250 25.727 447 289 16 11 441 20 439 3.33e-19 90.5
MS.gene96357.t1 MTR_3g107160 26.835 436 219 17 20 431 10 369 5.48e-19 89.4
MS.gene96357.t1 MTR_8g058970 27.373 453 266 20 11 418 8 442 7.63e-19 89.7
MS.gene96357.t1 MTR_8g445780 29.104 402 244 17 19 403 12 389 7.90e-19 89.0
MS.gene96357.t1 MTR_8g014260 27.354 446 280 13 19 441 15 439 4.24e-18 87.4
MS.gene96357.t1 MTR_5g092960 26.651 424 276 12 20 418 19 432 6.09e-18 87.0
MS.gene96357.t1 MTR_2g083840 27.948 458 281 21 20 450 21 456 7.30e-18 86.7
MS.gene96357.t1 MTR_4g056040 28.085 470 258 21 20 430 9 457 3.01e-17 85.1
MS.gene96357.t1 MTR_4g056030 27.727 440 268 18 20 430 9 427 3.98e-17 84.3
MS.gene96357.t1 MTR_0049s0110 25.122 410 265 15 20 418 8 386 7.06e-17 83.2
MS.gene96357.t1 MTR_2g072730 25.734 443 271 18 6 416 3 419 8.72e-17 83.2
MS.gene96357.t1 MTR_8g062310 26.585 410 251 17 20 418 25 395 1.51e-16 82.4
MS.gene96357.t1 MTR_4g045900 24.109 477 291 14 20 431 26 496 3.54e-16 81.6
MS.gene96357.t1 MTR_8g062080 26.402 428 250 18 20 419 23 413 5.30e-16 80.9
MS.gene96357.t1 MTR_7g007080 26.841 421 217 19 19 418 3 353 6.76e-16 80.1
MS.gene96357.t1 MTR_5g092960 28.011 357 228 11 20 357 19 365 9.23e-16 79.7
MS.gene96357.t1 MTR_7g056433 25.118 422 234 14 11 418 3 356 1.87e-15 78.6
MS.gene96357.t1 MTR_8g014160 25.893 448 233 19 19 441 40 413 2.13e-15 78.6
MS.gene96357.t1 MTR_2g007500 34.184 196 97 6 20 206 14 186 2.23e-15 77.8
MS.gene96357.t1 MTR_7g060470 25.116 430 261 13 18 438 1 378 2.75e-15 78.2
MS.gene96357.t1 MTR_3g082890 25.336 446 259 19 20 450 97 483 2.78e-15 78.6
MS.gene96357.t1 MTR_1g038760 28.267 375 215 16 14 362 6 352 3.16e-15 77.4
MS.gene96357.t1 MTR_8g085430 30.570 193 124 5 20 206 11 199 3.86e-15 77.0
MS.gene96357.t1 MTR_1g041245 24.586 423 222 12 20 421 11 357 6.27e-15 77.0
MS.gene96357.t1 MTR_1g038760 28.613 346 197 15 14 337 6 323 8.32e-15 76.3
MS.gene96357.t1 MTR_7g026500 24.828 435 229 16 12 421 6 367 1.11e-14 76.3
MS.gene96357.t1 MTR_4g050940 25.683 366 221 10 20 356 67 410 2.53e-14 75.9
MS.gene96357.t1 MTR_3g107120 26.207 435 228 19 20 429 9 375 2.73e-14 75.1
MS.gene96357.t1 MTR_8g062010 26.366 421 268 15 14 418 3 397 2.84e-14 75.5
MS.gene96357.t1 MTR_0049s0110 29.787 188 123 8 20 205 8 188 3.66e-14 73.2
MS.gene96357.t1 MTR_2g005990 24.490 441 237 16 20 431 6 379 4.40e-14 74.3
MS.gene96357.t1 MTR_5g073420 23.487 413 223 11 20 418 11 344 6.53e-14 73.9
MS.gene96357.t1 MTR_2g082800 27.073 410 256 17 12 405 18 400 6.93e-14 73.9
MS.gene96357.t1 MTR_2g007450 25.169 445 240 16 20 429 16 402 7.67e-14 73.9
MS.gene96357.t1 MTR_8g468810 25.243 412 267 16 20 408 25 418 8.12e-14 73.9
MS.gene96357.t1 MTR_5g021550 44.186 86 48 0 19 104 18 103 9.06e-14 69.7
MS.gene96357.t1 MTR_3g023270 25.000 368 234 15 14 361 3 348 1.05e-13 72.8
MS.gene96357.t1 MTR_7g032380 30.808 198 110 7 20 206 11 192 1.30e-13 72.8
MS.gene96357.t1 MTR_8g015830 27.027 222 133 7 13 210 1 217 1.42e-13 73.6
MS.gene96357.t1 MTR_8g015830 27.027 222 133 7 13 210 1 217 1.43e-13 73.6
MS.gene96357.t1 MTR_4g092430 26.453 344 195 14 19 332 42 357 1.57e-13 73.2
MS.gene96357.t1 MTR_0049s0110 29.787 188 123 8 20 205 8 188 1.85e-13 72.0
MS.gene96357.t1 MTR_7g115270 30.303 198 123 5 18 206 10 201 1.89e-13 72.4
MS.gene96357.t1 MTR_4g039440 24.450 409 239 13 17 418 31 376 1.98e-13 72.8
MS.gene96357.t1 MTR_0049s0110 29.787 188 123 8 20 205 8 188 2.06e-13 72.0
MS.gene96357.t1 MTR_3g108560 25.935 428 221 13 19 429 19 367 2.89e-13 72.0
MS.gene96357.t1 MTR_2g007400 24.434 442 240 20 17 429 9 385 4.47e-13 71.6
MS.gene96357.t1 MTR_5g083890 27.931 290 156 12 19 278 5 271 5.76e-13 71.6
MS.gene96357.t1 MTR_3g023630 28.279 244 156 8 20 253 8 242 6.19e-13 70.9
MS.gene96357.t1 MTR_4g055990 27.158 475 268 20 20 430 9 469 6.44e-13 71.2
MS.gene96357.t1 MTR_4g055990 27.158 475 268 20 20 430 9 469 7.32e-13 71.2
MS.gene96357.t1 MTR_2g082850 27.968 379 225 19 6 355 4 363 8.45e-13 70.5
MS.gene96357.t1 MTR_1g038710 25.467 428 271 15 20 418 19 427 1.00e-12 70.5
MS.gene96357.t1 MTR_4g092430 25.063 399 234 16 19 381 42 411 1.12e-12 70.5
MS.gene96357.t1 MTR_8g077460 31.111 225 139 8 19 232 9 228 1.46e-12 69.7
MS.gene96357.t1 MTR_4g024720 39.604 101 58 2 19 118 16 114 1.49e-12 67.4
MS.gene96357.t1 MTR_4g047950 23.161 367 256 11 14 364 7 363 1.97e-12 69.3
MS.gene96357.t1 MTR_1g108820 26.355 406 237 14 20 421 8 355 1.97e-12 69.3
MS.gene96357.t1 MTR_3g108560 30.653 199 103 7 19 206 19 193 2.22e-12 68.6
MS.gene96357.t1 MTR_2g008320 28.079 203 126 5 20 213 52 243 3.01e-12 68.9
MS.gene96357.t1 MTR_8g468810 25.698 358 233 14 20 359 25 367 3.69e-12 68.6
MS.gene96357.t1 MTR_8g014290 63.043 46 17 0 19 64 9 54 3.95e-12 64.7
MS.gene96357.t1 MTR_8g468810 26.444 329 203 15 20 332 25 330 5.82e-12 67.4
MS.gene96357.t1 MTR_4g056020 26.697 442 242 22 20 418 9 411 6.59e-12 68.2
MS.gene96357.t1 MTR_4g092980 24.375 320 221 7 22 330 16 325 6.89e-12 68.2
MS.gene96357.t1 MTR_3g023470 25.989 354 201 14 12 332 2 327 6.90e-12 67.8
MS.gene96357.t1 MTR_3g082890 24.426 479 259 21 20 450 17 440 7.45e-12 67.8
MS.gene96357.t1 MTR_8g468810 26.518 313 193 14 20 316 25 316 7.79e-12 67.0
MS.gene96357.t1 MTR_4g090940 25.740 338 226 10 20 344 159 484 8.74e-12 68.2
MS.gene96357.t1 MTR_3g463820 26.778 239 155 7 19 247 12 240 1.22e-11 65.9
MS.gene96357.t1 MTR_3g108150 29.101 189 122 5 19 206 12 189 1.36e-11 66.6
MS.gene96357.t1 MTR_7g056447 31.551 187 115 6 20 203 9 185 1.45e-11 65.9
MS.gene96357.t1 MTR_2g091145 23.488 430 276 14 20 428 21 418 1.53e-11 67.0
MS.gene96357.t1 MTR_4g024770 60.870 46 18 0 19 64 23 68 1.70e-11 60.5
MS.gene96357.t1 MTR_2g008310 30.208 192 118 5 20 206 2 182 1.79e-11 66.2
MS.gene96357.t1 MTR_8g468810 26.603 312 192 14 20 315 25 315 1.84e-11 66.2
MS.gene96357.t1 MTR_3g105060 27.935 247 163 7 20 259 14 252 2.50e-11 65.9
MS.gene96357.t1 MTR_3g099830 21.609 435 230 15 20 431 12 358 3.70e-11 65.5
MS.gene96357.t1 MTR_7g084080 28.458 253 154 8 20 261 17 253 4.06e-11 64.3
MS.gene96357.t1 MTR_3g448340 22.851 442 301 12 20 430 6 438 5.92e-11 65.1
MS.gene96357.t1 MTR_4g051640 51.923 52 23 1 18 67 28 79 6.12e-11 61.6
MS.gene96357.t1 MTR_7g114710 29.843 191 121 7 20 206 13 194 6.46e-11 64.3
MS.gene96357.t1 MTR_2g102420 42.683 82 43 1 279 360 10 87 6.58e-11 59.3
MS.gene96357.t1 MTR_5g087940 26.087 230 147 6 12 234 18 231 6.94e-11 64.7
MS.gene96357.t1 MTR_1g115245 27.317 205 133 7 19 220 25 216 7.36e-11 63.9
MS.gene96357.t1 MTR_1g090883 26.966 356 226 13 20 359 19 356 7.39e-11 64.3
MS.gene96357.t1 MTR_6g018660 24.740 384 233 14 8 356 3 365 8.57e-11 64.3
MS.gene96357.t1 MTR_4g051460 60.976 41 16 0 19 59 4 44 9.26e-11 58.2
MS.gene96357.t1 MTR_4g092320 60.976 41 16 0 19 59 4 44 9.26e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96357.t1 AT4G14096 26.608 451 302 13 20 450 8 449 1.96e-32 130
MS.gene96357.t1 AT4G14096 26.608 451 302 13 20 450 8 449 1.96e-32 130
MS.gene96357.t1 AT5G53840 29.877 405 264 12 19 418 17 406 2.33e-31 126
MS.gene96357.t1 AT3G58860 25.893 448 305 13 20 450 7 444 1.76e-29 121
MS.gene96357.t1 AT1G66290 27.483 433 257 16 20 425 29 431 8.69e-29 119
MS.gene96357.t1 AT3G59240 28.054 442 286 15 20 435 8 443 1.94e-28 119
MS.gene96357.t1 AT4G14103 28.255 361 232 11 20 363 8 358 2.58e-28 116
MS.gene96357.t1 AT4G14103 28.255 361 232 11 20 363 8 358 2.58e-28 116
MS.gene96357.t1 AT3G59210 26.998 463 296 16 20 449 7 460 6.91e-28 117
MS.gene96357.t1 AT3G59210 26.998 463 296 16 20 449 7 460 6.91e-28 117
MS.gene96357.t1 AT3G59210 26.998 463 296 16 20 449 7 460 6.91e-28 117
MS.gene96357.t1 AT3G59210 26.998 463 296 16 20 449 7 460 6.91e-28 117
MS.gene96357.t1 AT3G59210 26.998 463 296 16 20 449 7 460 6.91e-28 117
MS.gene96357.t1 AT4G14103 25.664 452 280 15 20 450 8 424 1.86e-27 115
MS.gene96357.t1 AT4G22280 27.644 416 255 14 20 421 2 385 1.91e-26 112
MS.gene96357.t1 AT1G58310 27.812 489 286 17 20 450 8 487 3.19e-26 112
MS.gene96357.t1 AT3G59230 25.979 485 307 17 20 462 12 486 5.49e-26 111
MS.gene96357.t1 AT4G22280 28.612 353 215 11 20 359 2 330 2.16e-25 107
MS.gene96357.t1 AT3G59200 25.902 471 293 15 20 449 7 462 6.36e-25 108
MS.gene96357.t1 AT1G78750 28.770 431 253 15 20 418 18 426 1.91e-24 106
MS.gene96357.t1 AT1G78750 28.770 431 253 15 20 418 18 426 1.91e-24 106
MS.gene96357.t1 AT2G42730 27.021 433 269 15 17 418 2 418 2.48e-24 106
MS.gene96357.t1 AT1G16930 26.196 439 278 13 10 421 7 426 3.30e-24 105
MS.gene96357.t1 AT1G16930 26.196 439 278 13 10 421 7 426 3.30e-24 105
MS.gene96357.t1 AT1G16930 26.196 439 278 13 10 421 7 426 3.30e-24 105
MS.gene96357.t1 AT1G66300 27.166 427 257 15 20 419 29 428 4.76e-24 105
MS.gene96357.t1 AT5G22660 27.189 434 259 15 15 418 8 414 2.19e-23 103
MS.gene96357.t1 AT5G44950 27.358 424 261 16 20 418 4 405 3.99e-23 102
MS.gene96357.t1 AT3G58900 26.196 439 269 14 20 419 2 424 5.76e-23 102
MS.gene96357.t1 AT4G10400 25.513 439 287 11 20 450 2 408 6.18e-23 101
MS.gene96357.t1 AT4G10400 25.513 439 287 11 20 450 2 408 6.18e-23 101
MS.gene96357.t1 AT4G10400 25.513 439 287 11 20 450 2 408 6.18e-23 101
MS.gene96357.t1 AT1G78760 27.294 436 270 17 5 418 1 411 6.87e-23 102
MS.gene96357.t1 AT3G59200 27.151 372 224 12 20 359 7 363 7.49e-23 100
MS.gene96357.t1 AT3G03030 25.792 442 271 16 20 419 2 428 1.57e-22 100
MS.gene96357.t1 AT1G06630 29.412 408 253 15 20 414 12 397 2.63e-22 99.8
MS.gene96357.t1 AT1G06630 29.412 408 253 15 20 414 12 397 2.63e-22 99.8
MS.gene96357.t1 AT1G06630 29.412 408 253 15 20 414 12 397 2.63e-22 99.8
MS.gene96357.t1 AT1G06630 29.412 408 253 15 20 414 12 397 2.63e-22 99.8
MS.gene96357.t1 AT1G06630 30.000 350 225 11 20 359 12 351 2.95e-22 98.6
MS.gene96357.t1 AT1G06630 30.000 350 225 11 20 359 12 351 2.95e-22 98.6
MS.gene96357.t1 AT1G06630 29.412 408 253 15 20 414 21 406 3.40e-22 99.4
MS.gene96357.t1 AT1G56610 28.177 362 225 8 24 362 14 363 3.79e-22 99.8
MS.gene96357.t1 AT3G58880 29.167 360 228 14 20 361 3 353 4.28e-22 99.4
MS.gene96357.t1 AT1G56610 28.919 370 212 10 24 362 77 426 5.67e-22 99.8
MS.gene96357.t1 AT1G55030 31.081 222 131 4 15 230 4 209 1.14e-21 97.8
MS.gene96357.t1 AT1G55030 31.081 222 131 4 15 230 14 219 1.17e-21 97.8
MS.gene96357.t1 AT5G38396 26.545 437 269 15 20 419 2 423 1.29e-21 98.2
MS.gene96357.t1 AT1G06630 29.923 391 236 15 20 396 12 378 1.50e-21 98.2
MS.gene96357.t1 AT3G59250 27.232 448 261 18 20 445 7 411 7.55e-21 95.5
MS.gene96357.t1 AT3G26930 27.669 459 277 14 19 454 20 446 1.19e-20 95.1
MS.gene96357.t1 AT3G59160 24.217 479 249 15 20 431 13 444 1.98e-20 94.7
MS.gene96357.t1 AT5G53635 27.187 423 263 13 21 418 1 403 2.13e-20 94.0
MS.gene96357.t1 AT3G03040 25.543 368 242 11 20 363 2 361 4.82e-20 93.6
MS.gene96357.t1 AT5G22730 27.570 428 264 15 19 419 27 435 5.95e-20 93.2
MS.gene96357.t1 AT5G22730 27.570 428 264 15 19 419 27 435 5.95e-20 93.2
MS.gene96357.t1 AT1G66310 28.378 444 272 17 10 431 9 428 6.84e-20 92.8
MS.gene96357.t1 AT1G66320 25.771 454 256 17 19 431 29 442 7.20e-20 92.8
MS.gene96357.t1 AT2G26860 25.952 420 265 13 20 418 2 396 8.91e-20 92.0
MS.gene96357.t1 AT2G26860 25.952 420 265 13 20 418 2 396 8.91e-20 92.0
MS.gene96357.t1 AT5G22670 28.302 424 265 16 20 422 11 416 1.47e-19 91.7
MS.gene96357.t1 AT3G60040 26.818 440 280 15 1 418 213 632 1.83e-19 92.4
MS.gene96357.t1 AT3G60040 26.879 439 279 15 2 418 212 630 1.92e-19 92.4
MS.gene96357.t1 AT1G69630 27.123 424 262 14 20 418 18 419 2.01e-19 91.3
MS.gene96357.t1 AT3G59190 23.967 484 308 15 20 449 12 489 2.33e-19 91.7
MS.gene96357.t1 AT5G38590 26.128 421 258 14 20 422 2 387 2.37e-19 90.9
MS.gene96357.t1 AT1G32375 24.541 436 282 13 20 438 2 407 2.60e-19 90.9
MS.gene96357.t1 AT1G32375 24.541 436 282 13 20 438 2 407 2.60e-19 90.9
MS.gene96357.t1 AT3G60040 26.818 440 280 15 1 418 213 632 2.76e-19 92.0
MS.gene96357.t1 AT3G60040 26.818 440 280 15 1 418 214 633 3.29e-19 92.0
MS.gene96357.t1 AT3G59170 26.201 458 252 17 20 416 7 439 3.77e-19 90.9
MS.gene96357.t1 AT3G49030 26.304 441 284 17 19 445 20 433 4.13e-19 90.5
MS.gene96357.t1 AT3G60040 27.316 421 264 15 20 418 13 413 6.76e-19 90.5
MS.gene96357.t1 AT4G13985 26.164 451 264 19 20 431 19 439 7.21e-19 89.7
MS.gene96357.t1 AT1G05080 26.509 464 266 18 12 441 5 427 7.67e-19 89.4
MS.gene96357.t1 AT4G13965 29.191 346 211 10 20 359 10 327 8.80e-19 89.4
MS.gene96357.t1 AT3G49150 25.282 443 299 12 13 428 9 446 1.21e-18 89.0
MS.gene96357.t1 AT3G26922 29.224 219 144 2 19 235 13 222 2.50e-18 86.3
MS.gene96357.t1 AT3G26922 29.224 219 144 2 19 235 13 222 2.50e-18 86.3
MS.gene96357.t1 AT1G55660 26.118 425 276 15 17 418 50 459 2.56e-18 88.2
MS.gene96357.t1 AT5G35995 27.696 473 277 20 20 450 5 454 3.19e-18 87.8
MS.gene96357.t1 AT5G35995 27.696 473 277 20 20 450 5 454 3.19e-18 87.8
MS.gene96357.t1 AT3G14710 26.097 433 273 14 2 416 8 411 4.21e-18 87.4
MS.gene96357.t1 AT3G62440 26.013 469 264 19 20 431 2 444 5.53e-18 87.0
MS.gene96357.t1 AT3G58920 26.237 465 285 19 20 438 2 454 5.90e-18 87.0
MS.gene96357.t1 AT3G50710 27.294 436 260 14 20 430 2 405 6.09e-18 86.7
MS.gene96357.t1 AT5G38390 25.682 440 257 16 20 419 2 411 6.24e-18 86.7
MS.gene96357.t1 AT3G58980 25.333 450 274 17 20 431 2 427 8.19e-18 87.0
MS.gene96357.t1 AT4G00315 24.641 418 285 13 20 418 2 408 8.39e-18 86.3
MS.gene96357.t1 AT3G49480 24.197 467 296 14 16 450 7 447 9.02e-18 86.3
MS.gene96357.t1 AT4G27050 25.170 441 266 18 20 418 4 422 1.09e-17 85.9
MS.gene96357.t1 AT4G27050 25.170 441 266 18 20 418 4 422 1.09e-17 85.9
MS.gene96357.t1 AT4G27050 25.170 441 266 18 20 418 4 422 1.09e-17 85.9
MS.gene96357.t1 AT4G27050 25.170 441 266 18 20 418 4 422 1.09e-17 85.9
MS.gene96357.t1 AT4G27050 25.170 441 266 18 20 418 4 422 1.09e-17 85.9
MS.gene96357.t1 AT5G41840 22.929 519 300 15 20 449 14 521 1.15e-17 86.3
MS.gene96357.t1 AT1G55660 29.694 229 146 6 17 238 50 270 1.16e-17 85.1
MS.gene96357.t1 AT5G25860 24.228 421 281 15 20 418 12 416 1.89e-17 85.1
MS.gene96357.t1 AT3G58930 25.974 385 240 14 20 368 2 377 2.00e-17 85.5
MS.gene96357.t1 AT3G58930 25.974 385 240 14 20 368 2 377 2.00e-17 85.5
MS.gene96357.t1 AT3G58930 25.974 385 240 14 20 368 2 377 2.00e-17 85.5
MS.gene96357.t1 AT3G59190 24.862 362 242 11 20 357 12 367 2.41e-17 84.3
MS.gene96357.t1 AT1G52650 26.328 433 269 16 20 419 2 417 2.65e-17 85.1
MS.gene96357.t1 AT2G04230 27.434 452 278 16 19 445 12 438 2.69e-17 84.7
MS.gene96357.t1 AT3G58940 25.740 439 270 17 20 429 2 413 3.89e-17 85.1
MS.gene96357.t1 AT3G58940 25.740 439 270 17 20 429 2 413 3.89e-17 85.1
MS.gene96357.t1 AT3G58930 25.132 378 218 13 20 368 2 343 4.22e-17 84.3
MS.gene96357.t1 AT3G58930 25.132 378 218 13 20 368 2 343 4.22e-17 84.3
MS.gene96357.t1 AT3G03030 26.625 323 196 12 20 309 2 316 4.51e-17 82.8
MS.gene96357.t1 AT5G22720 25.463 432 265 14 19 416 22 430 6.82e-17 83.6
MS.gene96357.t1 AT4G15060 26.024 415 244 18 20 402 26 409 7.41e-17 83.2
MS.gene96357.t1 AT1G51370 26.190 420 259 17 19 419 18 405 1.04e-16 82.8
MS.gene96357.t1 AT3G58900 26.168 321 200 9 20 311 2 314 1.09e-16 81.6
MS.gene96357.t1 AT1G56610 28.205 273 172 6 111 362 55 324 1.35e-16 82.4
MS.gene96357.t1 AT3G58900 25.301 332 219 10 20 332 2 323 1.56e-16 81.3
MS.gene96357.t1 AT3G58900 25.301 332 219 10 20 332 2 323 1.56e-16 81.3
MS.gene96357.t1 AT5G15620 25.670 448 276 18 20 435 2 424 2.72e-16 81.6
MS.gene96357.t1 AT3G59180 27.296 392 225 15 109 449 63 445 2.96e-16 81.6
MS.gene96357.t1 AT5G41830 23.256 516 318 15 20 471 13 514 6.94e-16 80.9
MS.gene96357.t1 AT5G44980 25.059 427 271 15 20 421 4 406 7.06e-16 80.5
MS.gene96357.t1 AT5G44980 25.059 427 271 15 20 421 4 406 7.06e-16 80.5
MS.gene96357.t1 AT5G22660 26.235 324 197 10 15 314 8 313 7.36e-16 79.0
MS.gene96357.t1 AT3G59000 25.167 449 282 13 20 429 2 435 7.45e-16 80.5
MS.gene96357.t1 AT4G15060 26.523 279 174 10 20 278 172 439 7.75e-16 80.9
MS.gene96357.t1 AT5G60610 26.034 411 250 16 20 410 2 378 9.85e-16 79.7
MS.gene96357.t1 AT5G60610 26.034 411 250 16 20 410 2 378 9.85e-16 79.7
MS.gene96357.t1 AT4G13960 25.641 429 276 16 20 419 2 416 1.07e-15 80.1
MS.gene96357.t1 AT4G13960 25.641 429 276 16 20 419 2 416 1.07e-15 80.1
MS.gene96357.t1 AT4G09920 30.000 220 143 6 20 237 2 212 1.09e-15 78.2
MS.gene96357.t1 AT4G09920 30.000 220 143 6 20 237 2 212 1.09e-15 78.2
MS.gene96357.t1 AT4G09920 30.000 220 143 6 20 237 2 212 1.09e-15 78.2
MS.gene96357.t1 AT5G38590 30.622 209 132 5 20 225 2 200 1.16e-15 78.2
MS.gene96357.t1 AT4G00320 23.409 487 311 14 20 449 13 494 1.54e-15 79.7
MS.gene96357.t1 AT1G13780 26.157 432 263 19 20 416 10 420 1.70e-15 79.3
MS.gene96357.t1 AT3G44810 25.850 294 208 7 25 309 12 304 1.74e-15 79.3
MS.gene96357.t1 AT4G09920 30.000 220 143 6 20 237 2 212 1.76e-15 77.8
MS.gene96357.t1 AT4G09920 30.000 220 143 6 20 237 2 212 1.76e-15 77.8
MS.gene96357.t1 AT3G26930 25.463 432 267 14 46 454 2 401 1.84e-15 79.0
MS.gene96357.t1 AT3G49040 29.596 223 130 8 19 230 16 222 2.45e-15 77.4
MS.gene96357.t1 AT1G06630 29.252 294 189 10 20 303 12 296 3.01e-15 77.0
MS.gene96357.t1 AT2G42720 25.000 436 287 15 20 429 2 423 3.31e-15 78.2
MS.gene96357.t1 AT1G78730 25.469 373 199 12 20 361 22 346 4.76e-15 77.8
MS.gene96357.t1 AT5G56390 25.532 423 250 16 40 433 23 409 5.82e-15 77.4
MS.gene96357.t1 AT4G00160 25.463 432 276 13 20 433 16 419 7.77e-15 77.4
MS.gene96357.t1 AT3G59150 25.431 464 300 16 9 436 2 455 1.30e-14 76.6
MS.gene96357.t1 AT5G56420 23.951 405 265 11 20 410 6 381 1.72e-14 75.9
MS.gene96357.t1 AT5G56420 23.951 405 265 11 20 410 6 381 1.72e-14 75.9
MS.gene96357.t1 AT5G56420 23.951 405 265 11 20 410 6 381 1.72e-14 75.9
MS.gene96357.t1 AT1G80470 25.330 379 254 12 20 386 15 376 1.92e-14 76.3
MS.gene96357.t1 AT5G56410 25.463 432 269 15 18 418 1 410 2.17e-14 76.3
MS.gene96357.t1 AT1G51370 26.632 383 237 15 19 386 18 371 2.39e-14 75.5
MS.gene96357.t1 AT4G26350 24.408 422 263 16 20 415 2 393 3.59e-14 75.1
MS.gene96357.t1 AT1G78840 27.660 423 260 16 20 419 5 404 5.65e-14 74.3
MS.gene96357.t1 AT1G78840 27.660 423 260 16 20 419 5 404 5.65e-14 74.3
MS.gene96357.t1 AT3G49030 27.532 316 198 13 19 322 20 316 6.03e-14 74.3
MS.gene96357.t1 AT1G51370 27.429 350 216 14 19 359 18 338 8.78e-14 73.2
MS.gene96357.t1 AT5G41630 24.685 397 258 12 20 381 12 402 1.31e-13 73.6
MS.gene96357.t1 AT5G22700 24.769 432 268 13 14 415 37 441 1.40e-13 73.6
MS.gene96357.t1 AT4G03220 26.913 379 225 15 20 359 24 389 1.77e-13 73.2
MS.gene96357.t1 AT1G60400 26.462 325 210 12 20 330 14 323 1.79e-13 72.8
MS.gene96357.t1 AT5G56370 27.324 355 202 11 20 359 2 315 2.52e-13 71.6
MS.gene96357.t1 AT5G44490 23.963 434 276 14 19 422 16 425 2.67e-13 72.4
MS.gene96357.t1 AT5G44960 24.286 420 260 16 20 419 5 386 2.84e-13 72.0
MS.gene96357.t1 AT5G38392 30.303 198 121 7 20 205 2 194 2.84e-13 69.7
MS.gene96357.t1 AT5G56370 26.202 416 245 13 20 414 2 376 3.15e-13 72.0
MS.gene96357.t1 AT5G56370 26.202 416 245 13 20 414 2 376 3.15e-13 72.0
MS.gene96357.t1 AT5G22700 24.942 433 260 14 17 415 3 404 3.36e-13 72.0
MS.gene96357.t1 AT5G22700 24.942 433 260 14 17 415 3 404 3.36e-13 72.0
MS.gene96357.t1 AT5G22700 24.942 433 260 14 17 415 3 404 3.36e-13 72.0
MS.gene96357.t1 AT5G22700 24.942 433 260 14 17 415 3 404 3.36e-13 72.0
MS.gene96357.t1 AT5G44490 23.963 434 276 14 19 422 16 425 3.94e-13 72.0
MS.gene96357.t1 AT5G56820 21.588 403 267 12 20 410 15 380 5.58e-13 71.2
MS.gene96357.t1 AT5G02930 28.261 230 143 10 20 244 28 240 6.83e-13 71.2
MS.gene96357.t1 AT3G44060 23.288 438 305 12 25 449 4 423 8.37e-13 70.9
MS.gene96357.t1 AT3G29830 24.276 449 271 18 17 419 5 430 8.60e-13 70.9
MS.gene96357.t1 AT5G22610 25.223 448 276 14 13 436 11 423 1.15e-12 70.5
MS.gene96357.t1 AT5G22610 24.783 460 293 15 13 436 11 453 1.32e-12 70.5
MS.gene96357.t1 AT5G56440 29.630 216 141 7 20 233 2 208 1.37e-12 70.1
MS.gene96357.t1 AT5G56690 23.261 417 279 14 22 418 4 399 2.62e-12 68.9
MS.gene96357.t1 AT3G62430 25.508 443 280 16 20 435 2 421 3.26e-12 68.9
MS.gene96357.t1 AT3G42770 23.868 486 285 20 25 479 4 435 3.79e-12 68.9
MS.gene96357.t1 AT3G51530 30.000 190 116 6 19 205 29 204 4.20e-12 68.6
MS.gene96357.t1 AT1G13780 26.730 318 190 14 20 307 10 314 1.53e-11 66.2
MS.gene96357.t1 AT3G29830 25.132 378 224 15 17 358 5 359 2.11e-11 66.6
MS.gene96357.t1 AT5G18770 23.474 426 276 14 19 416 23 426 2.49e-11 66.2
MS.gene96357.t1 AT5G53640 31.313 198 103 9 19 205 21 196 2.63e-11 63.9
MS.gene96357.t1 AT5G44980 25.329 304 190 10 20 301 4 292 4.80e-11 64.3
MS.gene96357.t1 AT5G44980 25.329 304 190 10 20 301 4 292 4.80e-11 64.3
MS.gene96357.t1 AT5G56400 24.454 458 294 13 14 450 28 454 5.29e-11 65.1
MS.gene96357.t1 AT5G18770 24.033 362 228 12 19 355 23 362 6.22e-11 64.7
MS.gene96357.t1 AT5G38386 23.077 416 249 14 20 418 2 363 7.43e-11 64.7
MS.gene96357.t1 AT5G38386 23.077 416 249 14 20 418 2 363 7.43e-11 64.7

Find 98 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCTTGGTGTTATAATATT+TGG 0.118070 4.2:-29332260 MS.gene96357:CDS
GACAACTTCAAGATTCAATT+TGG 0.150715 4.2:+29330728 None:intergenic
GTTAAGAAGGATAAATTTAA+TGG 0.216889 4.2:+29331791 None:intergenic
CCTCCACTTCTTGGCTAATA+TGG 0.231709 4.2:+29332424 None:intergenic
ATCTTGATCTCCTCTAAATA+TGG 0.233669 4.2:+29331074 None:intergenic
TGGAATTCTGTGGTTGTTAT+TGG 0.242774 4.2:-29331947 MS.gene96357:CDS
CGCTCTCTTCATTGCTAATA+AGG 0.256028 4.2:-29329611 MS.gene96357:intron
AGAAAATTCCCCATATTTAG+AGG 0.279357 4.2:-29331084 MS.gene96357:CDS
CTGGAAGTTCTTACGATTCC+TGG 0.281566 4.2:-29331345 MS.gene96357:CDS
GGAAGTTCTTACAGCATCTT+TGG 0.293982 4.2:+29332445 None:intergenic
ATGTTGCAATTTCCACATTA+AGG 0.299381 4.2:-29331905 MS.gene96357:CDS
GGTAACACAAAGTTATCTTT+TGG 0.300165 4.2:+29332149 None:intergenic
CTTCTCAACAGAAGATATTA+AGG 0.307374 4.2:+29332208 None:intergenic
ACAACTTCAAGATTCAATTT+GGG 0.327007 4.2:+29330729 None:intergenic
CCACAAGTGCCTCCACTTCT+TGG 0.327456 4.2:+29332415 None:intergenic
ATCAGTCAAGCCTACAAAAT+AGG 0.347556 4.2:-29332349 MS.gene96357:CDS
TAGTGCTTCATTAGTGTTCT+CGG 0.355640 4.2:+29331395 None:intergenic
GAGACGTTTATCAGCTGATA+TGG 0.362056 4.2:-29331042 MS.gene96357:CDS
ACTTGATGACACAACTTTCC+AGG 0.368020 4.2:+29330979 None:intergenic
TCTCCGAAAGACTCCTAAAC+TGG 0.371203 4.2:-29331364 MS.gene96357:CDS
CTTCCAGTTTAGGAGTCTTT+CGG 0.373671 4.2:+29331361 None:intergenic
GGATGATATCTTGGACCAAT+TGG 0.376333 4.2:-29331012 MS.gene96357:CDS
TGGAAATTGCAACATTAATC+TGG 0.384297 4.2:+29331913 None:intergenic
AGTCCCGTTAATAGCTCAAT+TGG 0.387444 4.2:+29331699 None:intergenic
TCATTGAATGAACTGCGTTT+AGG 0.397210 4.2:-29332104 MS.gene96357:CDS
AAAGTTGTGTCATCAAGTTT+TGG 0.397740 4.2:-29330974 MS.gene96357:intron
GTGCCCTGTCTTACAAGAAT+TGG 0.402005 4.2:-29331967 MS.gene96357:CDS
GGAATTCTGTGGTTGTTATT+GGG 0.403858 4.2:-29331946 MS.gene96357:CDS
TCTTGATCTCCTCTAAATAT+GGG 0.405909 4.2:+29331075 None:intergenic
CCTAGTGGTATTCGTTTCCC+TGG 0.417775 4.2:-29332059 MS.gene96357:CDS
GAACACTAATGAAGCACTAA+TGG 0.425341 4.2:-29331391 MS.gene96357:CDS
TGATTAGGTACTTAACTACT+TGG 0.425971 4.2:-29331225 MS.gene96357:intron
ATCTCCAATTGAGCTATTAA+CGG 0.429819 4.2:-29331703 MS.gene96357:CDS
GGAGAAGCTGGATGATATCT+TGG 0.431073 4.2:-29331021 MS.gene96357:CDS
ACTATCAATTTCTTCAAGCC+AGG 0.443829 4.2:+29332041 None:intergenic
TATTAAGGACTTAACTTTGT+CGG 0.445602 4.2:+29332223 None:intergenic
CCAGGCATACATCTTCCAAT+TGG 0.445740 4.2:+29330997 None:intergenic
ATGCATCAGCTAGGGAGATC+AGG 0.458723 4.2:+29331769 None:intergenic
AGTGCTTCATTAGTGTTCTC+GGG 0.462346 4.2:+29331396 None:intergenic
AACTAGATCTAAGAGACAAT+TGG 0.465025 4.2:+29332316 None:intergenic
AATTCCAATTCTTGTAAGAC+AGG 0.466930 4.2:+29331963 None:intergenic
TCTCCAATTGAGCTATTAAC+GGG 0.476475 4.2:-29331702 MS.gene96357:CDS
GTTCTTACAGCATCTTTGGT+AGG 0.480673 4.2:+29332449 None:intergenic
ATCAGCTGATATGGAGAAGC+TGG 0.480704 4.2:-29331033 MS.gene96357:CDS
ATCGTAAGAACTTCCAGTTT+AGG 0.483920 4.2:+29331351 None:intergenic
TGGAAGTTCTTACGATTCCT+GGG 0.484173 4.2:-29331344 MS.gene96357:CDS
CAAAATGAAAGACAGATAAG+TGG 0.485114 4.2:+29332390 None:intergenic
TCAATCTTGATTGTCATATG+AGG 0.485524 4.2:+29331855 None:intergenic
CTAGGGAGATCAGGTTAAGA+AGG 0.491968 4.2:+29331778 None:intergenic
CCAAGAAGTGGAGGCACTTG+TGG 0.494022 4.2:-29332415 MS.gene96357:CDS
TTCTTACAGCATCTTTGGTA+GGG 0.496479 4.2:+29332450 None:intergenic
TATAAAATGTAGGAAGGAGA+TGG 0.503290 4.2:+29331451 None:intergenic
CAATGTCTTCAACTTTCACT+AGG 0.512505 4.2:-29332176 MS.gene96357:CDS
TCAAATTATAAAATGTAGGA+AGG 0.520029 4.2:+29331445 None:intergenic
GTTGTCTTTCAAACTTCAGT+AGG 0.527826 4.2:-29330711 MS.gene96357:intron
AGTTAATATATGCATCAGCT+AGG 0.530951 4.2:+29331760 None:intergenic
TATCATCCACATTATGTCGT+TGG 0.531728 4.2:+29332522 None:intergenic
TGTGTCAAATTATAAAATGT+AGG 0.532522 4.2:+29331441 None:intergenic
ATATGAAGAAGGACGCCCTC+AGG 0.534903 4.2:+29332485 None:intergenic
CAACTTCAAGATTCAATTTG+GGG 0.535440 4.2:+29330730 None:intergenic
AGTTCTTACGATTCCTGGGG+TGG 0.537163 4.2:-29331340 MS.gene96357:intron
CCAATTGGAAGATGTATGCC+TGG 0.537278 4.2:-29330997 MS.gene96357:CDS
CTAGCGTCTTTACCATGCTA+AGG 0.539247 4.2:-29331481 MS.gene96357:intron
CTGAGTGAGGATAGTGCAGT+TGG 0.542903 4.2:+29329663 None:intergenic
CTATCAATTTCTTCAAGCCA+GGG 0.544471 4.2:+29332042 None:intergenic
TCTAATCACATACAAAGCCT+TGG 0.548838 4.2:-29332275 MS.gene96357:CDS
ATTGGAGATTGAGCAGCGTA+TGG 0.556199 4.2:+29331717 None:intergenic
GATTCTAAACTTCCTTAATG+TGG 0.559972 4.2:+29331893 None:intergenic
AGGCAAGCATAGCTCATGGC+TGG 0.563703 4.2:-29332575 None:intergenic
AATGTAAAATATACCACCCC+AGG 0.570766 4.2:+29331327 None:intergenic
AACCACTCTAAACACTAAGA+TGG 0.573038 4.2:+29330755 None:intergenic
CTTCCATATTAGCCAAGAAG+TGG 0.576503 4.2:-29332427 MS.gene96357:CDS
TAAGATCCAACGACATAATG+TGG 0.578294 4.2:-29332528 MS.gene96357:CDS
GTAACGAAAGAATATGAAGA+AGG 0.581461 4.2:+29332474 None:intergenic
AAAATGAAAGACAGATAAGT+GGG 0.584312 4.2:+29332391 None:intergenic
TATCTTTGCTAACAAGAACT+CGG 0.587578 4.2:-29332009 MS.gene96357:CDS
GTTAATATATGCATCAGCTA+GGG 0.594992 4.2:+29331761 None:intergenic
GCGCAGGCGTAGATCATGAC+TGG 0.599473 4.2:-29328563 MS.gene96357:CDS
CCATATTAGCCAAGAAGTGG+AGG 0.600289 4.2:-29332424 MS.gene96357:CDS
CCAGGGAAACGAATACCACT+AGG 0.602598 4.2:+29332059 None:intergenic
AGAGAAGATTTGAAACAGCA+CGG 0.609221 4.2:+29331173 None:intergenic
CTTGATCTCCTCTAAATATG+GGG 0.611649 4.2:+29331076 None:intergenic
CGAAAGCGAAGGACTGAGTG+AGG 0.614300 4.2:+29329650 None:intergenic
AACCATCTTAGTGTTTAGAG+TGG 0.614755 4.2:-29330757 MS.gene96357:CDS
TTACAAGAATTGGAATTCTG+TGG 0.620052 4.2:-29331957 MS.gene96357:CDS
TATTATTAGCGACTTACCTG+AGG 0.626309 4.2:-29332501 MS.gene96357:CDS
GATGGAGAGTATCCTTAGCA+TGG 0.626867 4.2:+29331469 None:intergenic
GCAGCGTATGGTTCATCATG+TGG 0.631744 4.2:+29331729 None:intergenic
CCTACAAAATAGGAAGAATG+TGG 0.644984 4.2:-29332339 MS.gene96357:CDS
CTAGTGAAAGTTGAAGACAT+TGG 0.645072 4.2:+29332177 None:intergenic
TCAAAAGCTGAGAAACTATG+TGG 0.645344 4.2:+29332128 None:intergenic
ATTCCAATTCTTGTAAGACA+GGG 0.645662 4.2:+29331964 None:intergenic
ATTATTAGCGACTTACCTGA+GGG 0.652265 4.2:-29332500 MS.gene96357:CDS
ACAAGCGTCAGCGAAAGCGA+AGG 0.659362 4.2:+29329639 None:intergenic
CTCCAAATATTATAACACCA+AGG 0.664984 4.2:+29332258 None:intergenic
GGAAGTTCTTACGATTCCTG+GGG 0.665994 4.2:-29331343 MS.gene96357:CDS
GCAAACTTTAGGTTTGACGT+CGG 0.678862 4.2:-29329689 MS.gene96357:intron
TTCACTCTACATATTCCTAG+TGG 0.693154 4.2:-29332074 MS.gene96357:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATGCTTTTTAAATTTTTA+TGG - chr4.2:29329953-29329972 MS.gene96357:intron 10.0%
!! AGCAATTCTATAAAAATATA+AGG + chr4.2:29332378-29332397 None:intergenic 15.0%
!! ATTAAAAAATTAACGATCAT+AGG - chr4.2:29331743-29331762 MS.gene96357:CDS 15.0%
!! CTAAATGAAAAAAAAAATGT+TGG + chr4.2:29330548-29330567 None:intergenic 15.0%
!! GAACTTAATATTAATATATG+TGG - chr4.2:29330681-29330700 MS.gene96357:intron 15.0%
!! TAAAAATAGATGTTACATAT+AGG - chr4.2:29330608-29330627 MS.gene96357:intron 15.0%
!! TTCTATAAAAATATAAGGAT+AGG + chr4.2:29332373-29332392 None:intergenic 15.0%
!!! AAATATTTGAGTTTCAATAT+TGG - chr4.2:29330854-29330873 MS.gene96357:intron 15.0%
!!! ACTATATAATAATACTTTTG+AGG - chr4.2:29329441-29329460 MS.gene96357:intron 15.0%
!!! ATTGAACCATTTAAATTTTT+CGG + chr4.2:29331851-29331870 None:intergenic 15.0%
!!! CGTTAATTTTTTAATTTTTC+CGG + chr4.2:29331738-29331757 None:intergenic 15.0%
!!! GTTAATTTTTTAATTTTTCC+GGG + chr4.2:29331737-29331756 None:intergenic 15.0%
!! AAAAATGTTGGAATTAACAT+TGG + chr4.2:29330536-29330555 None:intergenic 20.0%
!! AAATTTGATACAATTTGTGT+CGG - chr4.2:29331777-29331796 MS.gene96357:CDS 20.0%
!! ACAAAAAAATTCTAAGTAAG+AGG + chr4.2:29330417-29330436 None:intergenic 20.0%
!! ACTGAATCAATTTATGTTAT+TGG - chr4.2:29330291-29330310 MS.gene96357:intron 20.0%
!! ATAGATCACTATTGAATTAA+CGG - chr4.2:29330795-29330814 MS.gene96357:intron 20.0%
!! GAAGTTTGATTAAAAAACTT+GGG + chr4.2:29332079-29332098 None:intergenic 20.0%
!! GTTAAGAAGGATAAATTTAA+TGG + chr4.2:29329308-29329327 None:intergenic 20.0%
!! TCAAATTATAAAATGTAGGA+AGG + chr4.2:29329654-29329673 None:intergenic 20.0%
!! TGAAGTTTGATTAAAAAACT+TGG + chr4.2:29332080-29332099 None:intergenic 20.0%
!! TGTGTCAAATTATAAAATGT+AGG + chr4.2:29329658-29329677 None:intergenic 20.0%
!! TTAATATATGTGGAAATCAA+TGG - chr4.2:29330691-29330710 MS.gene96357:intron 20.0%
!!! AAAAATATAAGGATAGGTTT+TGG + chr4.2:29332367-29332386 None:intergenic 20.0%
!!! GACTTTAAACAATTTTTCAA+CGG - chr4.2:29331889-29331908 MS.gene96357:CDS 20.0%
!!! TGATTTTAAGATGCTTATAA+GGG - chr4.2:29331626-29331645 MS.gene96357:intron 20.0%
!!! TTCTAGTTTAATATTTAACC+CGG - chr4.2:29331307-29331326 MS.gene96357:intron 20.0%
!!! TTCTTTGTTTTTCTTTGAAT+GGG - chr4.2:29330158-29330177 MS.gene96357:intron 20.0%
!!! TTGAACCATTTAAATTTTTC+GGG + chr4.2:29331850-29331869 None:intergenic 20.0%
!!! TTTATTTGTTTTTTTGCAAG+TGG - chr4.2:29330748-29330767 MS.gene96357:CDS 20.0%
! AAAATGAAAGACAGATAAGT+GGG + chr4.2:29328708-29328727 None:intergenic 25.0%
! AATTGCTCAGTAAAAAGTAA+AGG - chr4.2:29332391-29332410 MS.gene96357:CDS 25.0%
! ACAACTTCAAGATTCAATTT+GGG + chr4.2:29330370-29330389 None:intergenic 25.0%
! ATAATGATAACTGATGAAGA+TGG - chr4.2:29331047-29331066 MS.gene96357:CDS 25.0%
! GATATGAAATCAACCAAATA+GGG - chr4.2:29332303-29332322 MS.gene96357:CDS 25.0%
! GGAAAAGGAAATAAAAAACT+TGG + chr4.2:29332346-29332365 None:intergenic 25.0%
! TAATAAAAGCCTAAACTTTG+TGG - chr4.2:29331355-29331374 MS.gene96357:CDS 25.0%
! TATTAAGGACTTAACTTTGT+CGG + chr4.2:29328876-29328895 None:intergenic 25.0%
! TGGAAGTAAAAGAAATGAAA+CGG + chr4.2:29330516-29330535 None:intergenic 25.0%
! TTGTCAATTGAAAATTCTCT+CGG - chr4.2:29331980-29331999 MS.gene96357:CDS 25.0%
!! AAATTGATTCAGTTCACAAA+TGG + chr4.2:29330284-29330303 None:intergenic 25.0%
!! ATTTTTGTGATGCTTATACT+TGG - chr4.2:29331933-29331952 MS.gene96357:CDS 25.0%
!! TCTAGTTTAATATTTAACCC+GGG - chr4.2:29331308-29331327 MS.gene96357:intron 25.0%
!!! AATTTTTTAATTTTTCCGGG+TGG + chr4.2:29331734-29331753 None:intergenic 25.0%
!!! ATCCTTTCAAGTTTCAAAAA+AGG - chr4.2:29330877-29330896 MS.gene96357:intron 25.0%
!!! CTGATTTTAAGATGCTTATA+AGG - chr4.2:29331625-29331644 MS.gene96357:intron 25.0%
!!! CTTCTTTGTTTTTCTTTGAA+TGG - chr4.2:29330157-29330176 MS.gene96357:intron 25.0%
!!! TTTTCAACGGTTTTAGTTTT+CGG - chr4.2:29331902-29331921 MS.gene96357:CDS 25.0%
AAAAGATTCCATTCACTTGT+AGG + chr4.2:29331656-29331675 None:intergenic 30.0%
AAATCAACCAAATAGGGATA+GGG - chr4.2:29332309-29332328 MS.gene96357:CDS 30.0%
AACTAGATCTAAGAGACAAT+TGG + chr4.2:29328783-29328802 None:intergenic 30.0%
AATTCCAATTCTTGTAAGAC+AGG + chr4.2:29329136-29329155 None:intergenic 30.0%
AATTCGGGATACATAAACAT+AGG + chr4.2:29330454-29330473 None:intergenic 30.0%
AGAAAATTCCCCATATTTAG+AGG - chr4.2:29330012-29330031 MS.gene96357:intron 30.0%
AGTTAATATATGCATCAGCT+AGG + chr4.2:29329339-29329358 None:intergenic 30.0%
ATCTCCAATTGAGCTATTAA+CGG - chr4.2:29329393-29329412 MS.gene96357:intron 30.0%
ATCTTGATCTCCTCTAAATA+TGG + chr4.2:29330025-29330044 None:intergenic 30.0%
ATGTGGAAATCAATGGATAT+TGG - chr4.2:29330698-29330717 MS.gene96357:intron 30.0%
ATGTTGCAATTTCCACATTA+AGG - chr4.2:29329191-29329210 MS.gene96357:intron 30.0%
ATTCCAATTCTTGTAAGACA+GGG + chr4.2:29329135-29329154 None:intergenic 30.0%
CAAAATGAAAGACAGATAAG+TGG + chr4.2:29328709-29328728 None:intergenic 30.0%
CAACTTCAAGATTCAATTTG+GGG + chr4.2:29330369-29330388 None:intergenic 30.0%
CATTCCACTATATAAAAGTG+TGG - chr4.2:29330202-29330221 MS.gene96357:intron 30.0%
CTCCAAATATTATAACACCA+AGG + chr4.2:29328841-29328860 None:intergenic 30.0%
CTTCTCAACAGAAGATATTA+AGG + chr4.2:29328891-29328910 None:intergenic 30.0%
CTTGAAACATAGGAAATACA+AGG + chr4.2:29329805-29329824 None:intergenic 30.0%
CTTGTATTTCCTATGTTTCA+AGG - chr4.2:29329803-29329822 MS.gene96357:intron 30.0%
GACAACTTCAAGATTCAATT+TGG + chr4.2:29330371-29330390 None:intergenic 30.0%
GATTCTAAACTTCCTTAATG+TGG + chr4.2:29329206-29329225 None:intergenic 30.0%
GGAAGTAAAAGAAATGAAAC+GGG + chr4.2:29330515-29330534 None:intergenic 30.0%
GGATATGAAATCAACCAAAT+AGG - chr4.2:29332302-29332321 MS.gene96357:CDS 30.0%
GGTAATCGAAATTCATGAAA+TGG - chr4.2:29331506-29331525 MS.gene96357:intron 30.0%
GTAACGAAAGAATATGAAGA+AGG + chr4.2:29328625-29328644 None:intergenic 30.0%
GTTAATATATGCATCAGCTA+GGG + chr4.2:29329338-29329357 None:intergenic 30.0%
GTTTGATTAAAAAACTTGGG+TGG + chr4.2:29332076-29332095 None:intergenic 30.0%
TACTGTTATCCTTGAAACAT+AGG + chr4.2:29329815-29329834 None:intergenic 30.0%
TATAAAATGTAGGAAGGAGA+TGG + chr4.2:29329648-29329667 None:intergenic 30.0%
TATCTTTGCTAACAAGAACT+CGG - chr4.2:29329087-29329106 MS.gene96357:intron 30.0%
TCAAAAAAGGCAATTTCCTT+TGG - chr4.2:29330890-29330909 MS.gene96357:intron 30.0%
TCAATCTTGATTGTCATATG+AGG + chr4.2:29329244-29329263 None:intergenic 30.0%
TCTTGATCTCCTCTAAATAT+GGG + chr4.2:29330024-29330043 None:intergenic 30.0%
TGATGAAGATGGTAAAGATA+TGG - chr4.2:29331058-29331077 MS.gene96357:CDS 30.0%
TGATTAGGTACTTAACTACT+TGG - chr4.2:29329871-29329890 MS.gene96357:intron 30.0%
TGGAAATTGCAACATTAATC+TGG + chr4.2:29329186-29329205 None:intergenic 30.0%
TTACAAGAATTGGAATTCTG+TGG - chr4.2:29329139-29329158 MS.gene96357:intron 30.0%
TTCCACCCGAAAAATTTAAA+TGG - chr4.2:29331842-29331861 MS.gene96357:CDS 30.0%
! AAAGTTGTGTCATCAAGTTT+TGG - chr4.2:29330122-29330141 MS.gene96357:intron 30.0%
! GAGAGAATTTTCAATTGACA+AGG + chr4.2:29331981-29332000 None:intergenic 30.0%
! GGAGTAGTTTTCTTATGATA+GGG - chr4.2:29330719-29330738 MS.gene96357:CDS 30.0%
! GGTAACACAAAGTTATCTTT+TGG + chr4.2:29328950-29328969 None:intergenic 30.0%
! TCAACCACACTTTTATATAG+TGG + chr4.2:29330209-29330228 None:intergenic 30.0%
! TCTTTTCGTGATTCTTGATT+AGG - chr4.2:29329856-29329875 MS.gene96357:intron 30.0%
! TGGAGTAGTTTTCTTATGAT+AGG - chr4.2:29330718-29330737 MS.gene96357:CDS 30.0%
! TTGGATTGGGTAAAGTTTAA+TGG + chr4.2:29332235-29332254 None:intergenic 30.0%
!! AGCCTTGGTGTTATAATATT+TGG - chr4.2:29328836-29328855 MS.gene96357:intron 30.0%
!! GTACATAAAAGCATCTAACT+TGG + chr4.2:29332209-29332228 None:intergenic 30.0%
!!! AACCATTTAAATTTTTCGGG+TGG + chr4.2:29331847-29331866 None:intergenic 30.0%
!!! ATAAGGATAGGTTTTGGAAA+AGG + chr4.2:29332361-29332380 None:intergenic 30.0%
!!! ATACAATTTGTGTCGGTTTT+AGG - chr4.2:29331784-29331803 MS.gene96357:CDS 30.0%
!!! TGCCTTTTTTGAAACTTGAA+AGG + chr4.2:29330882-29330901 None:intergenic 30.0%
AAAAAGGCAATTTCCTTTGG+TGG - chr4.2:29330893-29330912 MS.gene96357:intron 35.0%
AACATAGGAAATACAAGGAC+AGG + chr4.2:29329800-29329819 None:intergenic 35.0%
AACCACTCTAAACACTAAGA+TGG + chr4.2:29330344-29330363 None:intergenic 35.0%
AACCATCTTAGTGTTTAGAG+TGG - chr4.2:29330339-29330358 MS.gene96357:intron 35.0%
AAGTTTGCACTACGAAAAGA+TGG + chr4.2:29331395-29331414 None:intergenic 35.0%
AATGTAAAATATACCACCCC+AGG + chr4.2:29329772-29329791 None:intergenic 35.0%
ACATAAACATAGGCTGTGTT+TGG + chr4.2:29330444-29330463 None:intergenic 35.0%
ACATATATGTGTGAGAAGAC+AGG + chr4.2:29330990-29331009 None:intergenic 35.0%
ACTATCAATTTCTTCAAGCC+AGG + chr4.2:29329058-29329077 None:intergenic 35.0%
ATCAGTCAAGCCTACAAAAT+AGG - chr4.2:29328747-29328766 MS.gene96357:intron 35.0%
ATCGTAAGAACTTCCAGTTT+AGG + chr4.2:29329748-29329767 None:intergenic 35.0%
ATGACTATCAACAAAAGCCA+AGG - chr4.2:29330927-29330946 MS.gene96357:intron 35.0%
ATTATTAGCGACTTACCTGA+GGG - chr4.2:29328596-29328615 MS.gene96357:intron 35.0%
CAATGTCTTCAACTTTCACT+AGG - chr4.2:29328920-29328939 MS.gene96357:intron 35.0%
CACTACGAAAAGATGGATAT+GGG + chr4.2:29331388-29331407 None:intergenic 35.0%
CATTATCTTAAGCTCTTCTC+TGG + chr4.2:29331033-29331052 None:intergenic 35.0%
CCTACAAAATAGGAAGAATG+TGG - chr4.2:29328757-29328776 MS.gene96357:intron 35.0%
CTAGTGAAAGTTGAAGACAT+TGG + chr4.2:29328922-29328941 None:intergenic 35.0%
CTATCAATTTCTTCAAGCCA+GGG + chr4.2:29329057-29329076 None:intergenic 35.0%
CTTGATCTCCTCTAAATATG+GGG + chr4.2:29330023-29330042 None:intergenic 35.0%
GAAATCAACCAAATAGGGAT+AGG - chr4.2:29332308-29332327 MS.gene96357:CDS 35.0%
GCATCAGTGAAACACAATTT+AGG + chr4.2:29332448-29332467 None:intergenic 35.0%
GTAAAAGAAATGAAACGGGA+TGG + chr4.2:29330511-29330530 None:intergenic 35.0%
GTTGTCTTTCAAACTTCAGT+AGG - chr4.2:29330385-29330404 MS.gene96357:intron 35.0%
TAAAAGCCTAAACTTTGTGG+CGG - chr4.2:29331358-29331377 MS.gene96357:CDS 35.0%
TAAGATCCAACGACATAATG+TGG - chr4.2:29328568-29328587 MS.gene96357:CDS 35.0%
TAGTGCTTCATTAGTGTTCT+CGG + chr4.2:29329704-29329723 None:intergenic 35.0%
TATCATCCACATTATGTCGT+TGG + chr4.2:29328577-29328596 None:intergenic 35.0%
TATTATTAGCGACTTACCTG+AGG - chr4.2:29328595-29328614 MS.gene96357:intron 35.0%
TCAAAAGCTGAGAAACTATG+TGG + chr4.2:29328971-29328990 None:intergenic 35.0%
TCAGTGAAACACAATTTAGG+AGG + chr4.2:29332445-29332464 None:intergenic 35.0%
TCATTGAATGAACTGCGTTT+AGG - chr4.2:29328992-29329011 MS.gene96357:intron 35.0%
TCTAATCACATACAAAGCCT+TGG - chr4.2:29328821-29328840 MS.gene96357:intron 35.0%
TCTCCAATTGAGCTATTAAC+GGG - chr4.2:29329394-29329413 MS.gene96357:intron 35.0%
TGACTATCAACAAAAGCCAA+GGG - chr4.2:29330928-29330947 MS.gene96357:intron 35.0%
TGATTCAAATTCTCGCAAAG+TGG - chr4.2:29331814-29331833 MS.gene96357:CDS 35.0%
TGGAATTCTGTGGTTGTTAT+TGG - chr4.2:29329149-29329168 MS.gene96357:intron 35.0%
TGTCTTCTCACACATATATG+TGG - chr4.2:29330989-29331008 MS.gene96357:CDS 35.0%
TTCACTCTACATATTCCTAG+TGG - chr4.2:29329022-29329041 MS.gene96357:intron 35.0%
TTCTTACAGCATCTTTGGTA+GGG + chr4.2:29328649-29328668 None:intergenic 35.0%
! AGAGAAGATTTGAAACAGCA+CGG + chr4.2:29329926-29329945 None:intergenic 35.0%
! ATTACCTACTAGTTTAGACC+CGG + chr4.2:29331339-29331358 None:intergenic 35.0%
! CCACATTCTTCCTATTTTGT+AGG + chr4.2:29328760-29328779 None:intergenic 35.0%
! CGGTTAATCAACTTTTCTCT+GGG - chr4.2:29329107-29329126 MS.gene96357:intron 35.0%
! CTTTTCGTAGTGCAAACTTT+AGG - chr4.2:29331396-29331415 MS.gene96357:CDS 35.0%
! GAACACTAATGAAGCACTAA+TGG - chr4.2:29329705-29329724 MS.gene96357:intron 35.0%
! GGAATTCTGTGGTTGTTATT+GGG - chr4.2:29329150-29329169 MS.gene96357:intron 35.0%
! TCGGTTAATCAACTTTTCTC+TGG - chr4.2:29329106-29329125 MS.gene96357:intron 35.0%
!! ATTCATGAAAGTGTCTACTC+TGG - chr4.2:29331601-29331620 MS.gene96357:intron 35.0%
!! TTGCAGCGAATTCTAGAATT+CGG + chr4.2:29330470-29330489 None:intergenic 35.0%
!!! CTTTGTTATTTTGAGCAGAC+AGG - chr4.2:29332511-29332530 MS.gene96357:CDS 35.0%
AGGGAATACCTACAAGTGAA+TGG - chr4.2:29331645-29331664 MS.gene96357:intron 40.0%
AGTCCCGTTAATAGCTCAAT+TGG + chr4.2:29329400-29329419 None:intergenic 40.0%
AGTGCTTCATTAGTGTTCTC+GGG + chr4.2:29329703-29329722 None:intergenic 40.0%
ATTGGACAAACTCTGTTTGC+TGG - chr4.2:29330309-29330328 MS.gene96357:intron 40.0%
CATGGTAAAGACGCTAGTAA+TGG + chr4.2:29329612-29329631 None:intergenic 40.0%
CCAGGAAAAAAATATCGGGT+TGG + chr4.2:29332175-29332194 None:intergenic 40.0%
CGCTCTCTTCATTGCTAATA+AGG - chr4.2:29331485-29331504 MS.gene96357:intron 40.0%
CGGAGCCAGGAAAAAAATAT+CGG + chr4.2:29332180-29332199 None:intergenic 40.0%
CTTCCAGTTTAGGAGTCTTT+CGG + chr4.2:29329738-29329757 None:intergenic 40.0%
CTTCCATATTAGCCAAGAAG+TGG - chr4.2:29328669-29328688 MS.gene96357:intron 40.0%
GAGACGTTTATCAGCTGATA+TGG - chr4.2:29330054-29330073 MS.gene96357:intron 40.0%
GCACTACGAAAAGATGGATA+TGG + chr4.2:29331389-29331408 None:intergenic 40.0%
GGAAGTTCTTACAGCATCTT+TGG + chr4.2:29328654-29328673 None:intergenic 40.0%
GGAGCCAGGAAAAAAATATC+GGG + chr4.2:29332179-29332198 None:intergenic 40.0%
GGATGATATCTTGGACCAAT+TGG - chr4.2:29330084-29330103 MS.gene96357:intron 40.0%
GTCTTTCAAACTTCAGTAGG+TGG - chr4.2:29330388-29330407 MS.gene96357:intron 40.0%
GTGATCTATATGTAGACGTC+AGG + chr4.2:29330784-29330803 None:intergenic 40.0%
GTTCTTACAGCATCTTTGGT+AGG + chr4.2:29328650-29328669 None:intergenic 40.0%
TGGAAGTTCTTACGATTCCT+GGG - chr4.2:29329752-29329771 MS.gene96357:intron 40.0%
TTGGACAAACTCTGTTTGCT+GGG - chr4.2:29330310-29330329 MS.gene96357:intron 40.0%
! ACTTGATGACACAACTTTCC+AGG + chr4.2:29330120-29330139 None:intergenic 40.0%
! GCAAACTTTAGGTTTGACGT+CGG - chr4.2:29331407-29331426 MS.gene96357:CDS 40.0%
! TTTAGCTTATAAGACCCGTG+CGG - chr4.2:29331270-29331289 MS.gene96357:intron 40.0%
! TTTGGCGAATTGTGTTGTTC+AGG - chr4.2:29332281-29332300 MS.gene96357:CDS 40.0%
!! AAAAGCATCTAACTTGGCAG+TGG + chr4.2:29332203-29332222 None:intergenic 40.0%
!! TGCAGCGAATTCTAGAATTC+GGG + chr4.2:29330469-29330488 None:intergenic 40.0%
!!! CCAACCCGATATTTTTTTCC+TGG - chr4.2:29332172-29332191 MS.gene96357:CDS 40.0%
!!! TCAACGGTTTTAGTTTTCGG+CGG - chr4.2:29331905-29331924 MS.gene96357:CDS 40.0%
AAATCCCAATGGTTAGGGGT+AGG + chr4.2:29332264-29332283 None:intergenic 45.0%
AACACCGGGTCTAAACTAGT+AGG - chr4.2:29331332-29331351 MS.gene96357:intron 45.0%
AATCCCAATGGTTAGGGGTA+GGG + chr4.2:29332263-29332282 None:intergenic 45.0%
ATATTTAACCCGGGCAACAC+CGG - chr4.2:29331317-29331336 MS.gene96357:intron 45.0%
ATCAGCTGATATGGAGAAGC+TGG - chr4.2:29330063-29330082 MS.gene96357:intron 45.0%
ATCGCAAATGAGACCACCAA+AGG + chr4.2:29330909-29330928 None:intergenic 45.0%
ATGTGTGAGAAGACAGGAGT+TGG + chr4.2:29330984-29331003 None:intergenic 45.0%
ATTGGAGATTGAGCAGCGTA+TGG + chr4.2:29329382-29329401 None:intergenic 45.0%
CAACCAAATAGGGATAGGGA+GGG - chr4.2:29332313-29332332 MS.gene96357:CDS 45.0%
CACAATTCGCCAAATCCCAA+TGG + chr4.2:29332275-29332294 None:intergenic 45.0%
CCAATTGGAAGATGTATGCC+TGG - chr4.2:29330099-29330118 MS.gene96357:intron 45.0%
CCAGGCATACATCTTCCAAT+TGG + chr4.2:29330102-29330121 None:intergenic 45.0%
CCATATTAGCCAAGAAGTGG+AGG - chr4.2:29328672-29328691 MS.gene96357:intron 45.0%
CCTCCACTTCTTGGCTAATA+TGG + chr4.2:29328675-29328694 None:intergenic 45.0%
CGAAAGACAGCATTCTCGTT+AGG + chr4.2:29329525-29329544 None:intergenic 45.0%
CTAGCGTCTTTACCATGCTA+AGG - chr4.2:29329615-29329634 MS.gene96357:CDS 45.0%
CTAGGGAGATCAGGTTAAGA+AGG + chr4.2:29329321-29329340 None:intergenic 45.0%
CTGGAAGTTCTTACGATTCC+TGG - chr4.2:29329751-29329770 MS.gene96357:intron 45.0%
GCTTATACTTGGCATGCTAG+CGG - chr4.2:29331944-29331963 MS.gene96357:CDS 45.0%
GGAAGTTCTTACGATTCCTG+GGG - chr4.2:29329753-29329772 MS.gene96357:intron 45.0%
GGAGAAGCTGGATGATATCT+TGG - chr4.2:29330075-29330094 MS.gene96357:intron 45.0%
GGTTTACCGCCACAAAGTTT+AGG + chr4.2:29331367-29331386 None:intergenic 45.0%
GTGCCCTGTCTTACAAGAAT+TGG - chr4.2:29329129-29329148 MS.gene96357:intron 45.0%
TACCCCTAACCATTGGGATT+TGG - chr4.2:29332263-29332282 MS.gene96357:CDS 45.0%
TCAACCAAATAGGGATAGGG+AGG - chr4.2:29332312-29332331 MS.gene96357:CDS 45.0%
TCGCCAAATCCCAATGGTTA+GGG + chr4.2:29332269-29332288 None:intergenic 45.0%
TCTCCGAAAGACTCCTAAAC+TGG - chr4.2:29329732-29329751 MS.gene96357:intron 45.0%
TGTGTGAGAAGACAGGAGTT+GGG + chr4.2:29330983-29331002 None:intergenic 45.0%
TTCGCCAAATCCCAATGGTT+AGG + chr4.2:29332270-29332289 None:intergenic 45.0%
! TAATTTTTCCGGGTGGACCA+TGG + chr4.2:29331727-29331746 None:intergenic 45.0%
! TGGAATCTTTTACCAACCCC+CGG - chr4.2:29331665-29331684 MS.gene96357:CDS 45.0%
!! GATGGAGAGTATCCTTAGCA+TGG + chr4.2:29329630-29329649 None:intergenic 45.0%
AGCATCTAACTTGGCAGTGG+CGG + chr4.2:29332200-29332219 None:intergenic 50.0%
AGTTCTTACGATTCCTGGGG+TGG - chr4.2:29329756-29329775 MS.gene96357:intron 50.0%
ATATGAAGAAGGACGCCCTC+AGG + chr4.2:29328614-29328633 None:intergenic 50.0%
ATGCATCAGCTAGGGAGATC+AGG + chr4.2:29329330-29329349 None:intergenic 50.0%
CCAGGGAAACGAATACCACT+AGG + chr4.2:29329040-29329059 None:intergenic 50.0%
CCTAGTGGTATTCGTTTCCC+TGG - chr4.2:29329037-29329056 MS.gene96357:intron 50.0%
CGCCAAATCCCAATGGTTAG+GGG + chr4.2:29332268-29332287 None:intergenic 50.0%
CTGAGTGAGGATAGTGCAGT+TGG + chr4.2:29331436-29331455 None:intergenic 50.0%
GCAGCGTATGGTTCATCATG+TGG + chr4.2:29329370-29329389 None:intergenic 50.0%
TATACTTGGCATGCTAGCGG+AGG - chr4.2:29331947-29331966 MS.gene96357:CDS 50.0%
TATTTAACCCGGGCAACACC+GGG - chr4.2:29331318-29331337 MS.gene96357:intron 50.0%
TCACCCTCCCTATCCCTATT+TGG + chr4.2:29332319-29332338 None:intergenic 50.0%
! GGAATCTTTTACCAACCCCC+GGG - chr4.2:29331666-29331685 MS.gene96357:CDS 50.0%
ACAAGCGTCAGCGAAAGCGA+AGG + chr4.2:29331460-29331479 None:intergenic 55.0%
ACATAGGCGGAGCCCTTCAT+GGG - chr4.2:29331691-29331710 MS.gene96357:CDS 55.0%
AGCACCCTACCCCTAACCAT+TGG - chr4.2:29332256-29332275 MS.gene96357:CDS 55.0%
CCACAAGTGCCTCCACTTCT+TGG + chr4.2:29328684-29328703 None:intergenic 55.0%
CGAAAGCGAAGGACTGAGTG+AGG + chr4.2:29331449-29331468 None:intergenic 55.0%
CGTGTTTCAGTGACAGCCCT+TGG + chr4.2:29330947-29330966 None:intergenic 55.0%
GCACCCTACCCCTAACCATT+GGG - chr4.2:29332257-29332276 MS.gene96357:CDS 55.0%
GGGCTGTCACTGAAACACGT+TGG - chr4.2:29330948-29330967 MS.gene96357:intron 55.0%
GTGAGAAGACAGGAGTTGGG+AGG + chr4.2:29330980-29330999 None:intergenic 55.0%
TACATAGGCGGAGCCCTTCA+TGG - chr4.2:29331690-29331709 MS.gene96357:CDS 55.0%
TACCAACCCCCGGGTTACAT+AGG - chr4.2:29331675-29331694 MS.gene96357:CDS 55.0%
!! AGTTTAGACCCGGTGTTGCC+CGG + chr4.2:29331329-29331348 None:intergenic 55.0%
!! CCAAGAAGTGGAGGCACTTG+TGG - chr4.2:29328681-29328700 MS.gene96357:intron 55.0%
!! GGGTAGGGTGCTGTTGGATT+GGG + chr4.2:29332248-29332267 None:intergenic 55.0%
AGGGCTCCGCCTATGTAACC+CGG + chr4.2:29331687-29331706 None:intergenic 60.0%
CAACCCCCGGGTTACATAGG+CGG - chr4.2:29331678-29331697 MS.gene96357:CDS 60.0%
TATAAGACCCGTGCGGCGCA+CGG - chr4.2:29331277-29331296 MS.gene96357:intron 60.0%
!! AGCCCTTCATGGGCTAGGGT+GGG - chr4.2:29331701-29331720 MS.gene96357:CDS 60.0%
!! GGGGTAGGGTGCTGTTGGAT+TGG + chr4.2:29332249-29332268 None:intergenic 60.0%
!! GGTTAGGGGTAGGGTGCTGT+TGG + chr4.2:29332254-29332273 None:intergenic 60.0%
!! GTTTAGACCCGGTGTTGCCC+GGG + chr4.2:29331328-29331347 None:intergenic 60.0%
ATAAGACCCGTGCGGCGCAC+GGG - chr4.2:29331278-29331297 MS.gene96357:intron 65.0%
CGCCTATGTAACCCGGGGGT+TGG + chr4.2:29331680-29331699 None:intergenic 65.0%
GCTCCGCCTATGTAACCCGG+GGG + chr4.2:29331684-29331703 None:intergenic 65.0%
GGCCCACCCTAGCCCATGAA+GGG + chr4.2:29331706-29331725 None:intergenic 65.0%
GGCTCCGCCTATGTAACCCG+GGG + chr4.2:29331685-29331704 None:intergenic 65.0%
GGGCTCCGCCTATGTAACCC+GGG + chr4.2:29331686-29331705 None:intergenic 65.0%
TGGCCCACCCTAGCCCATGA+AGG + chr4.2:29331707-29331726 None:intergenic 65.0%
! AACTTGGCAGTGGCGGAGCC+AGG + chr4.2:29332193-29332212 None:intergenic 65.0%
! GCGGAGCCCTTCATGGGCTA+GGG - chr4.2:29331697-29331716 MS.gene96357:CDS 65.0%
!! GAGCCCTTCATGGGCTAGGG+TGG - chr4.2:29331700-29331719 MS.gene96357:CDS 65.0%
!! TCATGGGCTAGGGTGGGCCA+TGG - chr4.2:29331707-29331726 MS.gene96357:CDS 65.0%
AGGGTGGGCCATGGTCCACC+CGG - chr4.2:29331716-29331735 MS.gene96357:CDS 70.0%
GGCGGAGCCCTTCATGGGCT+AGG - chr4.2:29331696-29331715 MS.gene96357:CDS 70.0%
! ACGCCGACCCGTGCGCCGCA+CGG + chr4.2:29331288-29331307 None:intergenic 80.0%
! GACCCGTGCGGCGCACGGGT+CGG - chr4.2:29331282-29331301 MS.gene96357:intron 80.0%
! CGCCGACCCGTGCGCCGCAC+GGG + chr4.2:29331287-29331306 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 29328536 29332582 29328536 ID=MS.gene96357
chr4.2 mRNA 29328536 29332582 29328536 ID=MS.gene96357.t1;Parent=MS.gene96357
chr4.2 exon 29331656 29332582 29331656 ID=MS.gene96357.t1.exon1;Parent=MS.gene96357.t1
chr4.2 CDS 29331656 29332582 29331656 ID=cds.MS.gene96357.t1;Parent=MS.gene96357.t1
chr4.2 exon 29331341 29331499 29331341 ID=MS.gene96357.t1.exon2;Parent=MS.gene96357.t1
chr4.2 CDS 29331341 29331499 29331341 ID=cds.MS.gene96357.t1;Parent=MS.gene96357.t1
chr4.2 exon 29330975 29331240 29330975 ID=MS.gene96357.t1.exon3;Parent=MS.gene96357.t1
chr4.2 CDS 29330975 29331240 29330975 ID=cds.MS.gene96357.t1;Parent=MS.gene96357.t1
chr4.2 exon 29330712 29330782 29330712 ID=MS.gene96357.t1.exon4;Parent=MS.gene96357.t1
chr4.2 CDS 29330712 29330782 29330712 ID=cds.MS.gene96357.t1;Parent=MS.gene96357.t1
chr4.2 exon 29329612 29329700 29329612 ID=MS.gene96357.t1.exon5;Parent=MS.gene96357.t1
chr4.2 CDS 29329612 29329700 29329612 ID=cds.MS.gene96357.t1;Parent=MS.gene96357.t1
chr4.2 exon 29328536 29328589 29328536 ID=MS.gene96357.t1.exon6;Parent=MS.gene96357.t1
chr4.2 CDS 29328536 29328589 29328536 ID=cds.MS.gene96357.t1;Parent=MS.gene96357.t1
Gene Sequence

>MS.gene96357

ATGGCTGGTACAATCTCAACAGCAGACGTGCATAAGATCCAACGACATAATGTGGATGATATTATTAGCGACTTACCTGAGGGCGTCCTTCTTCATATTCTTTCGTTACTCCCTACCAAAGATGCTGTAAGAACTTCCATATTAGCCAAGAAGTGGAGGCACTTGTGGACCCACTTATCTGTCTTTCATTTTGAAACTTTTCTTCGTCAGTATCAGTCAAGCCTACAAAATAGGAAGAATGTGGCCAATTGTCTCTTAGATCTAGTTCAAAGATTACTGCACAAATCTAATCACATACAAAGCCTTGGTGTTATAATATTTGGAGTTGCTGTTGATGCCGACAAAGTTAAGTCCTTAATATCTTCTGTTGAGAAGCACAAAATCCAATGTCTTCAACTTTCACTAGGCGATCCAAAAGATAACTTTGTGTTACCACATAGTTTCTCAGCTTTTGAGTCATTGAATGAACTGCGTTTAGGACTCAAGTTCACTCTACATATTCCTAGTGGTATTCGTTTCCCTGGCTTGAAGAAATTGATAGTTTCAGATGTTATCTTTGCTAACAAGAACTCGGTTAATCAACTTTTCTCTGGGTGCCCTGTCTTACAAGAATTGGAATTCTGTGGTTGTTATTGGGAGAATATAGACCAGATTAATGTTGCAATTTCCACATTAAGGAAGTTTAGAATCAGTGTAGATTTTGATCCTCATATGACAATCAAGATTGATGCTGTGAATCTTTTATCTTTAAGTTGCACATGCAGTTTAACCATTAAATTTATCCTTCTTAACCTGATCTCCCTAGCTGATGCATATATTAACTTTGACTATCCACATGATGAACCATACGCTGCTCAATCTCCAATTGAGCTATTAACGGGACTTAGTAGTGTCAAGTCTCTCAAACTATATAATAATACTTTTGAGGTATGTTTGACTGTTTTCTCATCATCTTCATTTTTTTTTAAATATTGTATGCACTAATGCCTAACGAGAATGCTGTCTTTCGTTATGTGTTTCTTATAATTGTTGCATATTTTCTTTGTATCGCAATACTGAATGTAATTTTGTTTCCATTACTAGCGTCTTTACCATGCTAAGGATACTCTCCATCTCCTTCCTACATTTTATAATTTGACACATCTTTATGTGTTTTCTCTGAGTCCCGAGAACACTAATGAAGCACTAATGGACATTCTCCGAAAGACTCCTAAACTGGAAGTTCTTACGATTCCTGGGGTGGTATATTTTACATTCTGCACCTGTCCTTGTATTTCCTATGTTTCAAGGATAACAGTAATATTATTTCTGTAAATTGACTCTTTTCGTGATTCTTGATTAGGTACTTAACTACTTGGATGATGAAGATTTGATACTGAACTCAATGCCGTGCTGTTTCAAATCTTCTCTTAATCAATTATGCTTTTTAAATTTTTATGGAGATGAATATGAAATACAATTCGTTAAGTTTATCTTAGAAAATTCCCCATATTTAGAGGAGATCAAGATACACTGTTCGAGACGTTTATCAGCTGATATGGAGAAGCTGGATGATATCTTGGACCAATTGGAAGATGTATGCCTGGAAAGTTGTGTCATCAAGTTTTGGTAAATCTTCTTTCTTCTTTGTTTTTCTTTGAATGGGTTCAATTTACTAATTTAACTTCATTCCACTATATAAAAGTGTGGTTGATTAATTAAATAGCATCACTTGTTAGACTACTATGACTAGTTTATGAAGTATGCCATTTGTGAACTGAATCAATTTATGTTATTGGACAAACTCTGTTTGCTGGGAAGTGAAACCATCTTAGTGTTTAGAGTGGTTGACCCCAAATTGAATCTTGAAGTTGTCTTTCAAACTTCAGTAGGTGGTCTCCTCTTACTTAGAATTTTTTTGTGTTACCAAACACAGCCTATGTTTATGTATCCCGAATTCTAGAATTCGCTGCAACTCATTTTCTCAATTTTGCCATCCCGTTTCATTTCTTTTACTTCCAATGTTAATTCCAACATTTTTTTTTTCATTTAGCAAATAGTAATAACAATAGATGTTACTCTTTCAAAAAAAATAAAAATAGATGTTACATATAGGTAGTTATAATCGTACTTTTCTCTATCAAAGACATTTGATGTACAAATTTCGAACTTAATATTAATATATGTGGAAATCAATGGATATTGGAGTAGTTTTCTTATGATAGGGTTTGTTTTTATTTGTTTTTTTGCAAGTGGTAGATACATACCTGACGTCTACATATAGATCACTATTGAATTAACGGTTGAGTTTCTAATAATGATTAAAAAAACAAAAAGAAAAATATTTGAGTTTCAATATTGGATCCTTTCAAGTTTCAAAAAAGGCAATTTCCTTTGGTGGTCTCATTTGCGATGACTATCAACAAAAGCCAAGGGCTGTCACTGAAACACGTTGGTGTATACCTCCCAACTCCTGTCTTCTCACACATATATGTGGCTGTTTCTAGAGTTACATCCAGAGAAGAGCTTAAGATAATGATAACTGATGAAGATGGTAAAGATATGGATGAGACGTCTAACGTAATCTATGAAGAAGTATTTCAAAATGTTTGATATGAATTGATCTATTATATGTTGTTTTAAGAAAACTAAAAAAAATCTTAGTGTCGTATGTAATATTGCACTAACAAAATTTTCAAAGAACTTATAGTTTTCAAGATTAAATTTAGTTATCATTCAATTATATATGAAATCGTTTAGCTTATAAGACCCGTGCGGCGCACGGGTCGGCGTTCTAGTTTAATATTTAACCCGGGCAACACCGGGTCTAAACTAGTAGGTAATAAAAGCCTAAACTTTGTGGCGGTAAACCCATATCCATCTTTTCGTAGTGCAAACTTTAGGTTTGACGTCGGTTACCAACTGCACTATCCTCACTCAGTCCTTCGCTTTCGCTGACGCTTGTTGCGTCGCTCTCTTCATTGCTAATAAGGTAATCGAAATTCATGAAATGGAAATCAATTGTTTTCTTTCTTTCTTCATATTATAGCTTTGCGATGTAAATTTGTAGTGAAATTGAAATTGAAATTCATGAAAGTGTCTACTCTGGACTGATTTTAAGATGCTTATAAGGGAATACCTACAAGTGAATGGAATCTTTTACCAACCCCCGGGTTACATAGGCGGAGCCCTTCATGGGCTAGGGTGGGCCATGGTCCACCCGGAAAAATTAAAAAATTAACGATCATAGGTCTATTTTGCAAAATTTGATACAATTTGTGTCGGTTTTAGGTTTCAGTTGATTCAAATTCTCGCAAAGTGGTGTAGTTCCACCCGAAAAATTTAAATGGTTCAATTATAGATCTATTTTGCGAGACTTTAAACAATTTTTCAACGGTTTTAGTTTTCGGCGGTTTCAATTTTTGTGATGCTTATACTTGGCATGCTAGCGGAGGCTTACAGTCCTTGTCAATTGAAAATTCTCTCGGTTAACAGTTTACTGTTAAAAAAAAGTTTCATAATTTATAGTAGTTGTAAAATATGTAATTATGTAAGCATCCACCCAAGTTTTTTAATCAAACTTCATCATTTCAACTTCGATTTTAATGCTTATTACAACTTTAATTTGTGTTTATATATTATAATTTATTTTAGTGACCAACCCGATATTTTTTTCCTGGCTCCGCCACTGCCAAGTTAGATGCTTTTATGTACATACCATTAAACTTTACCCAATCCAACAGCACCCTACCCCTAACCATTGGGATTTGGCGAATTGTGTTGTTCAGGATATGAAATCAACCAAATAGGGATAGGGAGGGTGAGTGTCCAAGTTTTTTATTTCCTTTTCCAAAACCTATCCTTATATTTTTATAGAATTGCTCAGTAAAAAGTAAAGGACTGATTTTATGCGAAGATAAAAGCTTGCCTCCTAAATTGTGTTTCACTGATGCTTTATACTCGTAACTCTTCTTACTATAATTTTTTTTATTAATACTTTGTTATTTTGAGCAGACAGGCGCAGGCGTAGATCATGACTGGTACAATCTCAACAACAAATGTGCATAA

Protein sequence

>MS.gene96357.t1

MAGTISTADVHKIQRHNVDDIISDLPEGVLLHILSLLPTKDAVRTSILAKKWRHLWTHLSVFHFETFLRQYQSSLQNRKNVANCLLDLVQRLLHKSNHIQSLGVIIFGVAVDADKVKSLISSVEKHKIQCLQLSLGDPKDNFVLPHSFSAFESLNELRLGLKFTLHIPSGIRFPGLKKLIVSDVIFANKNSVNQLFSGCPVLQELEFCGCYWENIDQINVAISTLRKFRISVDFDPHMTIKIDAVNLLSLSCTCSLTIKFILLNLISLADAYINFDYPHDEPYAAQSPIELLTGLSSVKSLKLYNNTFERLYHAKDTLHLLPTFYNLTHLYVFSLSPENTNEALMDILRKTPKLEVLTIPGVVLNYLDDEDLILNSMPCCFKSSLNQLCFLNFYGDEYEIQFVKFILENSPYLEEIKIHCSRRLSADMEKLDDILDQLEDVCLESCVIKFCETILVFRVVDPKLNLEVVFQTSVGLTSVTNCTILTQSFAFADACCVALFIANKTGAGVDHDWYNLNNKCA