Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031603.t1 | XP_004505452.1 | 62.3 | 284 | 102 | 3 | 1 | 282 | 6 | 286 | 7.10E-87 | 330.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031603.t1 | Q3EAE5 | 32.9 | 219 | 139 | 5 | 19 | 232 | 2 | 217 | 1.7e-20 | 101.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031603.t1 | A0A1S2YIW0 | 62.3 | 284 | 102 | 3 | 1 | 282 | 6 | 286 | 5.1e-87 | 330.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031603.t1 | MTR_3g048290 | 57.278 | 316 | 126 | 4 | 1 | 313 | 5 | 314 | 7.73e-109 | 326 |
MS.gene031603.t1 | MTR_4g080787 | 55.927 | 329 | 120 | 7 | 3 | 318 | 6 | 322 | 1.73e-103 | 313 |
MS.gene031603.t1 | MTR_4g080773 | 54.711 | 329 | 127 | 6 | 3 | 318 | 6 | 325 | 1.21e-99 | 303 |
MS.gene031603.t1 | MTR_5g039970 | 52.083 | 336 | 150 | 5 | 1 | 332 | 1 | 329 | 1.67e-99 | 297 |
MS.gene031603.t1 | MTR_4g080773 | 54.711 | 329 | 127 | 6 | 3 | 318 | 6 | 325 | 1.71e-99 | 303 |
MS.gene031603.t1 | MTR_4g080590 | 49.091 | 330 | 150 | 5 | 1 | 326 | 5 | 320 | 9.88e-88 | 268 |
MS.gene031603.t1 | MTR_4g080590 | 49.091 | 330 | 150 | 5 | 1 | 326 | 5 | 320 | 1.33e-86 | 268 |
MS.gene031603.t1 | MTR_7g023310 | 51.399 | 286 | 124 | 6 | 1 | 278 | 5 | 283 | 3.67e-80 | 251 |
MS.gene031603.t1 | MTR_5g039950 | 47.040 | 321 | 119 | 5 | 1 | 318 | 5 | 277 | 8.83e-80 | 249 |
MS.gene031603.t1 | MTR_2g094750 | 46.061 | 330 | 153 | 9 | 17 | 323 | 88 | 415 | 2.13e-77 | 245 |
MS.gene031603.t1 | MTR_7g039630 | 45.171 | 321 | 135 | 3 | 1 | 318 | 5 | 287 | 5.31e-76 | 237 |
MS.gene031603.t1 | MTR_4g081030 | 44.620 | 316 | 147 | 8 | 9 | 318 | 7 | 300 | 1.83e-65 | 211 |
MS.gene031603.t1 | MTR_7g023330 | 41.925 | 322 | 116 | 6 | 2 | 318 | 3 | 258 | 6.22e-64 | 208 |
MS.gene031603.t1 | MTR_4g130200 | 41.066 | 319 | 114 | 6 | 1 | 318 | 5 | 250 | 1.48e-59 | 196 |
MS.gene031603.t1 | MTR_4g080807 | 45.492 | 244 | 92 | 4 | 89 | 332 | 1 | 203 | 1.60e-52 | 179 |
MS.gene031603.t1 | MTR_4g080813 | 62.651 | 83 | 28 | 2 | 1 | 80 | 1 | 83 | 1.38e-26 | 101 |
MS.gene031603.t1 | MTR_1g082260 | 36.129 | 155 | 96 | 1 | 72 | 223 | 23 | 177 | 2.05e-24 | 98.6 |
MS.gene031603.t1 | MTR_5g080710 | 31.455 | 213 | 134 | 4 | 19 | 226 | 33 | 238 | 1.27e-19 | 89.7 |
MS.gene031603.t1 | MTR_2g094450 | 55.814 | 86 | 37 | 1 | 194 | 278 | 31 | 116 | 2.32e-19 | 85.1 |
MS.gene031603.t1 | MTR_5g005690 | 27.876 | 226 | 152 | 4 | 7 | 226 | 5 | 225 | 1.38e-17 | 84.0 |
MS.gene031603.t1 | MTR_8g066650 | 29.231 | 325 | 192 | 10 | 12 | 323 | 73 | 372 | 2.72e-17 | 82.8 |
MS.gene031603.t1 | MTR_4g032730 | 26.332 | 319 | 192 | 10 | 10 | 311 | 4 | 296 | 3.24e-16 | 79.7 |
MS.gene031603.t1 | MTR_5g038430 | 30.804 | 224 | 141 | 7 | 10 | 226 | 87 | 303 | 3.66e-16 | 79.7 |
MS.gene031603.t1 | MTR_2g082850 | 31.076 | 251 | 138 | 11 | 1 | 229 | 1 | 238 | 7.80e-16 | 78.2 |
MS.gene031603.t1 | MTR_2g005990 | 30.542 | 203 | 121 | 5 | 19 | 205 | 6 | 204 | 1.38e-15 | 77.4 |
MS.gene031603.t1 | MTR_5g073340 | 33.514 | 185 | 91 | 7 | 19 | 201 | 8 | 162 | 5.83e-15 | 74.7 |
MS.gene031603.t1 | MTR_0049s0110 | 30.631 | 222 | 137 | 9 | 19 | 233 | 8 | 219 | 6.65e-15 | 74.3 |
MS.gene031603.t1 | MTR_8g467800 | 25.776 | 322 | 211 | 8 | 10 | 322 | 11 | 313 | 9.65e-15 | 74.7 |
MS.gene031603.t1 | MTR_0049s0110 | 32.632 | 190 | 116 | 7 | 19 | 203 | 8 | 190 | 1.13e-14 | 74.3 |
MS.gene031603.t1 | MTR_3g108560 | 29.319 | 191 | 121 | 6 | 13 | 201 | 14 | 192 | 1.13e-14 | 73.9 |
MS.gene031603.t1 | MTR_0049s0110 | 32.632 | 190 | 116 | 7 | 19 | 203 | 8 | 190 | 1.49e-14 | 73.9 |
MS.gene031603.t1 | MTR_0049s0110 | 30.631 | 222 | 137 | 9 | 19 | 233 | 8 | 219 | 1.99e-14 | 74.3 |
MS.gene031603.t1 | MTR_3g108560 | 29.319 | 191 | 121 | 6 | 13 | 201 | 14 | 192 | 2.01e-14 | 73.9 |
MS.gene031603.t1 | MTR_5g084070 | 31.250 | 208 | 131 | 3 | 19 | 224 | 13 | 210 | 3.82e-14 | 73.2 |
MS.gene031603.t1 | MTR_8g467800 | 25.472 | 318 | 209 | 8 | 10 | 318 | 11 | 309 | 3.86e-14 | 73.6 |
MS.gene031603.t1 | MTR_1g038710 | 26.129 | 310 | 201 | 10 | 19 | 317 | 19 | 311 | 4.62e-14 | 73.2 |
MS.gene031603.t1 | MTR_3g110010 | 27.052 | 329 | 202 | 10 | 18 | 338 | 12 | 310 | 5.66e-14 | 73.2 |
MS.gene031603.t1 | MTR_3g109982 | 27.052 | 329 | 202 | 10 | 18 | 338 | 12 | 310 | 8.99e-14 | 72.8 |
MS.gene031603.t1 | MTR_3g023470 | 28.440 | 327 | 203 | 13 | 8 | 323 | 2 | 308 | 1.75e-13 | 71.2 |
MS.gene031603.t1 | MTR_7g088260 | 32.212 | 208 | 106 | 7 | 13 | 205 | 85 | 272 | 1.86e-13 | 71.2 |
MS.gene031603.t1 | MTR_6g025160 | 25.283 | 265 | 183 | 5 | 1 | 262 | 83 | 335 | 1.94e-13 | 70.9 |
MS.gene031603.t1 | MTR_1g115245 | 26.606 | 218 | 147 | 4 | 10 | 224 | 17 | 224 | 2.14e-13 | 70.1 |
MS.gene031603.t1 | MTR_3g036250 | 28.421 | 190 | 122 | 5 | 19 | 201 | 5 | 187 | 2.49e-13 | 70.5 |
MS.gene031603.t1 | MTR_2g007500 | 30.151 | 199 | 120 | 5 | 19 | 213 | 14 | 197 | 2.96e-13 | 70.1 |
MS.gene031603.t1 | MTR_8g445780 | 30.693 | 202 | 123 | 8 | 11 | 203 | 6 | 199 | 3.24e-13 | 70.5 |
MS.gene031603.t1 | MTR_7g116580 | 27.907 | 301 | 161 | 10 | 17 | 280 | 1 | 282 | 3.32e-13 | 70.5 |
MS.gene031603.t1 | MTR_1g090883 | 25.240 | 313 | 210 | 7 | 11 | 317 | 11 | 305 | 5.33e-13 | 69.7 |
MS.gene031603.t1 | MTR_7g007080 | 29.167 | 192 | 123 | 4 | 18 | 201 | 3 | 189 | 6.04e-13 | 69.7 |
MS.gene031603.t1 | MTR_4g119700 | 30.093 | 216 | 119 | 8 | 18 | 206 | 5 | 215 | 1.51e-12 | 68.9 |
MS.gene031603.t1 | MTR_7g056447 | 30.049 | 203 | 132 | 5 | 18 | 217 | 8 | 203 | 1.52e-12 | 67.8 |
MS.gene031603.t1 | MTR_3g023630 | 28.877 | 187 | 123 | 5 | 19 | 201 | 8 | 188 | 1.64e-12 | 68.2 |
MS.gene031603.t1 | MTR_3g023270 | 27.778 | 216 | 112 | 6 | 10 | 206 | 3 | 193 | 1.69e-12 | 68.2 |
MS.gene031603.t1 | MTR_2g082860 | 46.341 | 82 | 41 | 2 | 7 | 87 | 14 | 93 | 2.28e-12 | 63.5 |
MS.gene031603.t1 | MTR_8g017280 | 30.469 | 128 | 72 | 4 | 18 | 138 | 35 | 152 | 2.74e-12 | 67.0 |
MS.gene031603.t1 | MTR_8g017280 | 30.469 | 128 | 72 | 4 | 18 | 138 | 35 | 152 | 3.02e-12 | 67.4 |
MS.gene031603.t1 | MTR_3g105060 | 31.016 | 187 | 118 | 5 | 19 | 201 | 14 | 193 | 3.57e-12 | 67.0 |
MS.gene031603.t1 | MTR_1g115250 | 29.583 | 240 | 137 | 10 | 7 | 222 | 20 | 251 | 3.60e-12 | 67.4 |
MS.gene031603.t1 | MTR_2g008310 | 29.798 | 198 | 120 | 4 | 19 | 208 | 2 | 188 | 3.94e-12 | 67.0 |
MS.gene031603.t1 | MTR_4g050930 | 24.286 | 350 | 209 | 14 | 6 | 337 | 16 | 327 | 4.14e-12 | 67.0 |
MS.gene031603.t1 | MTR_8g058965 | 27.304 | 293 | 176 | 12 | 10 | 278 | 4 | 283 | 4.21e-12 | 67.4 |
MS.gene031603.t1 | MTR_7g084080 | 26.538 | 260 | 164 | 8 | 13 | 260 | 11 | 255 | 5.24e-12 | 65.9 |
MS.gene031603.t1 | MTR_4g092980 | 24.444 | 315 | 207 | 9 | 21 | 323 | 16 | 311 | 5.55e-12 | 67.0 |
MS.gene031603.t1 | MTR_7g056433 | 29.648 | 199 | 118 | 5 | 16 | 203 | 9 | 196 | 7.67e-12 | 66.2 |
MS.gene031603.t1 | MTR_5g007410 | 31.429 | 210 | 119 | 8 | 21 | 215 | 28 | 227 | 8.16e-12 | 66.2 |
MS.gene031603.t1 | MTR_5g045510 | 30.435 | 184 | 119 | 5 | 21 | 201 | 14 | 191 | 8.22e-12 | 65.9 |
MS.gene031603.t1 | MTR_4g050930 | 24.286 | 350 | 209 | 14 | 6 | 337 | 16 | 327 | 8.49e-12 | 66.2 |
MS.gene031603.t1 | MTR_5g021550 | 35.484 | 124 | 67 | 5 | 18 | 131 | 18 | 138 | 1.06e-11 | 62.8 |
MS.gene031603.t1 | MTR_0492s0020 | 30.481 | 187 | 114 | 8 | 18 | 201 | 85 | 258 | 1.06e-11 | 65.9 |
MS.gene031603.t1 | MTR_0543s0010 | 30.481 | 187 | 114 | 8 | 18 | 201 | 85 | 258 | 1.17e-11 | 65.9 |
MS.gene031603.t1 | MTR_8g014160 | 29.851 | 201 | 119 | 8 | 18 | 201 | 40 | 235 | 1.18e-11 | 65.9 |
MS.gene031603.t1 | MTR_1g011430 | 29.870 | 231 | 133 | 10 | 19 | 237 | 7 | 220 | 1.19e-11 | 65.5 |
MS.gene031603.t1 | MTR_2g007360 | 26.667 | 270 | 129 | 9 | 19 | 271 | 12 | 229 | 1.27e-11 | 65.5 |
MS.gene031603.t1 | MTR_3g108150 | 30.811 | 185 | 119 | 5 | 18 | 201 | 12 | 188 | 1.37e-11 | 65.5 |
MS.gene031603.t1 | MTR_7g025650 | 28.704 | 216 | 122 | 7 | 18 | 206 | 18 | 228 | 1.38e-11 | 65.9 |
MS.gene031603.t1 | MTR_8g077460 | 29.469 | 207 | 115 | 7 | 18 | 203 | 9 | 205 | 1.62e-11 | 65.1 |
MS.gene031603.t1 | MTR_8g014260 | 28.308 | 325 | 178 | 17 | 18 | 316 | 15 | 310 | 1.75e-11 | 65.5 |
MS.gene031603.t1 | MTR_2g007530 | 40.909 | 88 | 49 | 1 | 19 | 103 | 19 | 106 | 2.87e-11 | 64.3 |
MS.gene031603.t1 | MTR_3g026920 | 29.018 | 224 | 129 | 8 | 19 | 224 | 19 | 230 | 2.88e-11 | 64.7 |
MS.gene031603.t1 | MTR_2g082800 | 28.319 | 226 | 148 | 6 | 8 | 228 | 18 | 234 | 2.90e-11 | 64.7 |
MS.gene031603.t1 | MTR_3g023440 | 26.791 | 321 | 194 | 13 | 17 | 323 | 1 | 294 | 3.08e-11 | 64.3 |
MS.gene031603.t1 | MTR_7g055943 | 27.358 | 212 | 145 | 4 | 19 | 226 | 40 | 246 | 3.37e-11 | 64.3 |
MS.gene031603.t1 | MTR_8g062270 | 29.064 | 203 | 126 | 4 | 16 | 203 | 13 | 212 | 3.83e-11 | 64.3 |
MS.gene031603.t1 | MTR_5g058000 | 28.571 | 196 | 111 | 5 | 19 | 201 | 8 | 187 | 3.98e-11 | 63.9 |
MS.gene031603.t1 | MTR_3g019220 | 26.205 | 332 | 204 | 12 | 18 | 335 | 25 | 329 | 4.36e-11 | 64.3 |
MS.gene031603.t1 | MTR_2g007450 | 27.053 | 207 | 121 | 5 | 19 | 201 | 16 | 216 | 4.71e-11 | 63.9 |
MS.gene031603.t1 | MTR_0227s0010 | 28.571 | 203 | 129 | 8 | 10 | 203 | 6 | 201 | 5.25e-11 | 63.5 |
MS.gene031603.t1 | MTR_5g092960 | 24.620 | 329 | 225 | 8 | 1 | 316 | 1 | 319 | 5.99e-11 | 63.5 |
MS.gene031603.t1 | MTR_4g051480 | 25.726 | 241 | 154 | 10 | 1 | 228 | 9 | 237 | 6.47e-11 | 63.9 |
MS.gene031603.t1 | MTR_4g092300 | 25.726 | 241 | 154 | 10 | 1 | 228 | 9 | 237 | 6.60e-11 | 63.9 |
MS.gene031603.t1 | MTR_3g036320 | 25.000 | 316 | 203 | 12 | 21 | 323 | 22 | 316 | 7.19e-11 | 63.2 |
MS.gene031603.t1 | MTR_1g038760 | 28.054 | 221 | 131 | 8 | 10 | 221 | 6 | 207 | 7.20e-11 | 63.2 |
MS.gene031603.t1 | MTR_1g053025 | 29.954 | 217 | 133 | 9 | 19 | 222 | 2 | 212 | 7.55e-11 | 63.2 |
MS.gene031603.t1 | MTR_2g007400 | 31.527 | 203 | 118 | 8 | 19 | 204 | 12 | 210 | 7.70e-11 | 63.2 |
MS.gene031603.t1 | MTR_6g088700 | 23.734 | 316 | 214 | 8 | 16 | 323 | 11 | 307 | 7.98e-11 | 63.2 |
MS.gene031603.t1 | MTR_3g107100 | 27.979 | 193 | 124 | 6 | 16 | 201 | 8 | 192 | 8.40e-11 | 63.2 |
MS.gene031603.t1 | MTR_1g038760 | 28.054 | 221 | 131 | 8 | 10 | 221 | 6 | 207 | 8.81e-11 | 62.8 |
MS.gene031603.t1 | MTR_5g092960 | 24.924 | 329 | 224 | 8 | 1 | 316 | 1 | 319 | 8.84e-11 | 63.2 |
MS.gene031603.t1 | MTR_3g040700 | 28.351 | 194 | 117 | 6 | 19 | 201 | 43 | 225 | 9.69e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031603.t1 | AT5G53840 | 31.061 | 264 | 170 | 4 | 15 | 278 | 14 | 265 | 5.44e-24 | 102 |
MS.gene031603.t1 | AT4G00315 | 32.599 | 227 | 139 | 6 | 19 | 234 | 2 | 225 | 8.63e-24 | 101 |
MS.gene031603.t1 | AT4G14103 | 29.073 | 313 | 201 | 10 | 18 | 319 | 7 | 309 | 1.33e-23 | 100 |
MS.gene031603.t1 | AT4G14103 | 29.073 | 313 | 201 | 10 | 18 | 319 | 7 | 309 | 1.33e-23 | 100 |
MS.gene031603.t1 | AT4G14103 | 29.073 | 313 | 201 | 10 | 18 | 319 | 7 | 309 | 2.67e-23 | 100 |
MS.gene031603.t1 | AT1G66290 | 29.524 | 315 | 199 | 9 | 12 | 319 | 22 | 320 | 3.18e-23 | 100 |
MS.gene031603.t1 | AT1G55660 | 32.589 | 224 | 143 | 5 | 14 | 232 | 48 | 268 | 1.36e-22 | 97.4 |
MS.gene031603.t1 | AT4G14096 | 29.967 | 307 | 199 | 10 | 18 | 319 | 7 | 302 | 3.59e-22 | 97.4 |
MS.gene031603.t1 | AT4G14096 | 29.967 | 307 | 199 | 10 | 18 | 319 | 7 | 302 | 3.59e-22 | 97.4 |
MS.gene031603.t1 | AT1G55660 | 32.589 | 224 | 143 | 5 | 14 | 232 | 48 | 268 | 4.88e-22 | 97.1 |
MS.gene031603.t1 | AT3G26922 | 29.864 | 221 | 147 | 3 | 11 | 229 | 6 | 220 | 5.14e-22 | 94.7 |
MS.gene031603.t1 | AT3G26922 | 29.864 | 221 | 147 | 3 | 11 | 229 | 6 | 220 | 5.14e-22 | 94.7 |
MS.gene031603.t1 | AT3G59200 | 28.354 | 328 | 194 | 11 | 18 | 319 | 6 | 318 | 2.41e-21 | 94.0 |
MS.gene031603.t1 | AT3G59200 | 28.354 | 328 | 194 | 11 | 18 | 319 | 6 | 318 | 8.23e-21 | 93.6 |
MS.gene031603.t1 | AT3G58880 | 26.970 | 330 | 190 | 13 | 17 | 319 | 1 | 306 | 1.20e-20 | 92.8 |
MS.gene031603.t1 | AT1G66300 | 27.937 | 315 | 194 | 9 | 19 | 319 | 29 | 324 | 1.25e-20 | 92.8 |
MS.gene031603.t1 | AT1G32375 | 30.516 | 213 | 140 | 3 | 19 | 227 | 2 | 210 | 1.58e-20 | 92.0 |
MS.gene031603.t1 | AT1G32375 | 30.516 | 213 | 140 | 3 | 19 | 227 | 2 | 210 | 1.58e-20 | 92.0 |
MS.gene031603.t1 | AT3G58860 | 27.508 | 309 | 199 | 11 | 19 | 319 | 7 | 298 | 1.79e-20 | 92.4 |
MS.gene031603.t1 | AT3G59210 | 30.530 | 321 | 191 | 13 | 18 | 319 | 6 | 313 | 2.07e-20 | 92.4 |
MS.gene031603.t1 | AT3G59210 | 30.530 | 321 | 191 | 13 | 18 | 319 | 6 | 313 | 2.07e-20 | 92.4 |
MS.gene031603.t1 | AT3G59210 | 30.530 | 321 | 191 | 13 | 18 | 319 | 6 | 313 | 2.07e-20 | 92.4 |
MS.gene031603.t1 | AT3G59210 | 30.530 | 321 | 191 | 13 | 18 | 319 | 6 | 313 | 2.07e-20 | 92.4 |
MS.gene031603.t1 | AT3G59210 | 30.530 | 321 | 191 | 13 | 18 | 319 | 6 | 313 | 2.07e-20 | 92.4 |
MS.gene031603.t1 | AT1G58310 | 28.994 | 338 | 201 | 11 | 13 | 319 | 2 | 331 | 1.27e-19 | 90.1 |
MS.gene031603.t1 | AT3G58900 | 27.356 | 329 | 194 | 11 | 19 | 319 | 2 | 313 | 1.88e-19 | 87.8 |
MS.gene031603.t1 | AT3G58900 | 27.356 | 329 | 194 | 11 | 19 | 319 | 2 | 313 | 2.16e-19 | 87.8 |
MS.gene031603.t1 | AT3G58900 | 27.356 | 329 | 194 | 11 | 19 | 319 | 2 | 313 | 2.16e-19 | 87.8 |
MS.gene031603.t1 | AT4G13985 | 27.044 | 318 | 208 | 11 | 15 | 319 | 15 | 321 | 4.15e-19 | 88.2 |
MS.gene031603.t1 | AT3G58900 | 27.356 | 329 | 194 | 11 | 19 | 319 | 2 | 313 | 7.82e-19 | 87.4 |
MS.gene031603.t1 | AT4G10400 | 30.435 | 207 | 140 | 3 | 19 | 224 | 2 | 205 | 8.51e-19 | 87.0 |
MS.gene031603.t1 | AT4G10400 | 30.435 | 207 | 140 | 3 | 19 | 224 | 2 | 205 | 8.51e-19 | 87.0 |
MS.gene031603.t1 | AT4G10400 | 30.435 | 207 | 140 | 3 | 19 | 224 | 2 | 205 | 8.51e-19 | 87.0 |
MS.gene031603.t1 | AT2G04230 | 34.101 | 217 | 132 | 5 | 18 | 227 | 12 | 224 | 1.29e-18 | 86.7 |
MS.gene031603.t1 | AT1G55030 | 29.224 | 219 | 142 | 4 | 12 | 227 | 12 | 220 | 1.54e-18 | 86.7 |
MS.gene031603.t1 | AT1G55030 | 29.224 | 219 | 142 | 4 | 12 | 227 | 2 | 210 | 1.54e-18 | 86.3 |
MS.gene031603.t1 | AT4G15060 | 27.823 | 248 | 166 | 6 | 13 | 254 | 18 | 258 | 1.75e-18 | 86.3 |
MS.gene031603.t1 | AT5G22660 | 27.597 | 308 | 211 | 5 | 18 | 321 | 12 | 311 | 2.11e-18 | 84.7 |
MS.gene031603.t1 | AT3G59240 | 28.344 | 314 | 200 | 10 | 18 | 319 | 7 | 307 | 3.50e-18 | 85.9 |
MS.gene031603.t1 | AT5G56420 | 28.852 | 305 | 177 | 10 | 18 | 312 | 5 | 279 | 3.64e-18 | 85.5 |
MS.gene031603.t1 | AT5G56420 | 28.852 | 305 | 177 | 10 | 18 | 312 | 5 | 279 | 3.64e-18 | 85.5 |
MS.gene031603.t1 | AT5G56420 | 28.852 | 305 | 177 | 10 | 18 | 312 | 5 | 279 | 3.64e-18 | 85.5 |
MS.gene031603.t1 | AT3G59230 | 25.641 | 351 | 229 | 10 | 10 | 336 | 4 | 346 | 4.60e-18 | 85.5 |
MS.gene031603.t1 | AT4G00160 | 30.876 | 217 | 140 | 4 | 18 | 229 | 15 | 226 | 5.00e-18 | 85.1 |
MS.gene031603.t1 | AT1G06630 | 28.165 | 316 | 190 | 13 | 18 | 319 | 11 | 303 | 7.63e-18 | 83.2 |
MS.gene031603.t1 | AT3G49150 | 26.498 | 317 | 220 | 8 | 18 | 328 | 15 | 324 | 1.08e-17 | 84.3 |
MS.gene031603.t1 | AT3G59160 | 27.059 | 340 | 205 | 11 | 18 | 319 | 12 | 346 | 1.25e-17 | 84.0 |
MS.gene031603.t1 | AT5G44950 | 27.974 | 311 | 203 | 9 | 18 | 319 | 3 | 301 | 1.52e-17 | 83.6 |
MS.gene031603.t1 | AT4G22280 | 29.545 | 264 | 161 | 7 | 19 | 274 | 2 | 248 | 1.77e-17 | 82.4 |
MS.gene031603.t1 | AT1G66310 | 28.963 | 328 | 206 | 11 | 1 | 319 | 1 | 310 | 2.06e-17 | 83.2 |
MS.gene031603.t1 | AT3G59170 | 27.035 | 344 | 203 | 12 | 18 | 319 | 6 | 343 | 2.07e-17 | 83.2 |
MS.gene031603.t1 | AT4G22280 | 29.545 | 264 | 161 | 7 | 19 | 274 | 2 | 248 | 2.14e-17 | 83.2 |
MS.gene031603.t1 | AT1G06630 | 28.165 | 316 | 190 | 13 | 18 | 319 | 11 | 303 | 2.33e-17 | 82.4 |
MS.gene031603.t1 | AT1G06630 | 28.165 | 316 | 190 | 13 | 18 | 319 | 11 | 303 | 2.33e-17 | 82.4 |
MS.gene031603.t1 | AT1G51370 | 28.378 | 222 | 133 | 5 | 14 | 227 | 14 | 217 | 2.77e-17 | 82.0 |
MS.gene031603.t1 | AT5G22720 | 30.556 | 252 | 148 | 8 | 18 | 258 | 22 | 257 | 2.95e-17 | 82.8 |
MS.gene031603.t1 | AT5G38590 | 28.485 | 330 | 208 | 9 | 19 | 339 | 2 | 312 | 3.07e-17 | 82.4 |
MS.gene031603.t1 | AT5G38590 | 32.075 | 212 | 134 | 4 | 19 | 227 | 2 | 206 | 3.09e-17 | 81.3 |
MS.gene031603.t1 | AT1G06630 | 28.165 | 316 | 190 | 13 | 18 | 319 | 20 | 312 | 3.19e-17 | 82.4 |
MS.gene031603.t1 | AT1G06630 | 28.165 | 316 | 190 | 13 | 18 | 319 | 11 | 303 | 3.57e-17 | 82.4 |
MS.gene031603.t1 | AT1G06630 | 28.165 | 316 | 190 | 13 | 18 | 319 | 11 | 303 | 3.57e-17 | 82.4 |
MS.gene031603.t1 | AT1G06630 | 28.165 | 316 | 190 | 13 | 18 | 319 | 11 | 303 | 3.57e-17 | 82.4 |
MS.gene031603.t1 | AT1G06630 | 28.165 | 316 | 190 | 13 | 18 | 319 | 11 | 303 | 3.57e-17 | 82.4 |
MS.gene031603.t1 | AT5G22660 | 27.124 | 306 | 211 | 5 | 18 | 319 | 12 | 309 | 4.73e-17 | 82.0 |
MS.gene031603.t1 | AT1G51370 | 28.378 | 222 | 133 | 5 | 14 | 227 | 14 | 217 | 5.12e-17 | 82.0 |
MS.gene031603.t1 | AT1G06630 | 28.165 | 316 | 190 | 13 | 18 | 319 | 11 | 303 | 5.14e-17 | 82.0 |
MS.gene031603.t1 | AT1G51370 | 28.378 | 222 | 133 | 5 | 14 | 227 | 14 | 217 | 6.31e-17 | 81.6 |
MS.gene031603.t1 | AT4G09920 | 27.826 | 230 | 158 | 4 | 19 | 247 | 2 | 224 | 6.67e-17 | 80.1 |
MS.gene031603.t1 | AT4G09920 | 27.826 | 230 | 158 | 4 | 19 | 247 | 2 | 224 | 6.67e-17 | 80.1 |
MS.gene031603.t1 | AT4G09920 | 27.826 | 230 | 158 | 4 | 19 | 247 | 2 | 224 | 6.67e-17 | 80.1 |
MS.gene031603.t1 | AT4G15060 | 27.984 | 243 | 163 | 6 | 16 | 254 | 170 | 404 | 6.71e-17 | 82.0 |
MS.gene031603.t1 | AT5G22670 | 26.159 | 302 | 217 | 2 | 18 | 319 | 10 | 305 | 7.56e-17 | 81.6 |
MS.gene031603.t1 | AT4G09920 | 27.826 | 230 | 158 | 4 | 19 | 247 | 2 | 224 | 1.35e-16 | 79.7 |
MS.gene031603.t1 | AT4G09920 | 27.826 | 230 | 158 | 4 | 19 | 247 | 2 | 224 | 1.35e-16 | 79.7 |
MS.gene031603.t1 | AT2G42730 | 27.726 | 321 | 200 | 11 | 16 | 319 | 2 | 307 | 1.49e-16 | 80.9 |
MS.gene031603.t1 | AT4G13965 | 29.108 | 213 | 137 | 3 | 19 | 227 | 10 | 212 | 3.84e-16 | 79.3 |
MS.gene031603.t1 | AT3G52680 | 31.646 | 237 | 142 | 8 | 1 | 227 | 1 | 227 | 6.00e-16 | 78.6 |
MS.gene031603.t1 | AT2G29930 | 29.080 | 337 | 174 | 14 | 10 | 319 | 4 | 302 | 6.90e-16 | 78.6 |
MS.gene031603.t1 | AT2G29930 | 29.080 | 337 | 174 | 14 | 10 | 319 | 4 | 302 | 6.90e-16 | 78.6 |
MS.gene031603.t1 | AT4G26340 | 27.273 | 297 | 188 | 9 | 19 | 312 | 2 | 273 | 9.49e-16 | 78.2 |
MS.gene031603.t1 | AT1G13570 | 28.525 | 305 | 164 | 13 | 14 | 310 | 1 | 259 | 1.24e-15 | 76.6 |
MS.gene031603.t1 | AT3G52680 | 32.203 | 236 | 142 | 8 | 1 | 227 | 1 | 227 | 1.48e-15 | 77.8 |
MS.gene031603.t1 | AT4G13960 | 27.273 | 319 | 199 | 13 | 19 | 319 | 2 | 305 | 1.93e-15 | 77.4 |
MS.gene031603.t1 | AT4G13960 | 27.273 | 319 | 199 | 13 | 19 | 319 | 2 | 305 | 1.93e-15 | 77.4 |
MS.gene031603.t1 | AT1G16930 | 26.994 | 326 | 215 | 9 | 19 | 334 | 15 | 327 | 3.16e-15 | 76.6 |
MS.gene031603.t1 | AT1G16930 | 26.994 | 326 | 215 | 9 | 19 | 334 | 15 | 327 | 3.16e-15 | 76.6 |
MS.gene031603.t1 | AT1G16930 | 26.994 | 326 | 215 | 9 | 19 | 334 | 15 | 327 | 3.16e-15 | 76.6 |
MS.gene031603.t1 | AT3G44810 | 28.839 | 267 | 169 | 9 | 24 | 278 | 12 | 269 | 3.42e-15 | 76.6 |
MS.gene031603.t1 | AT1G13570 | 28.525 | 305 | 164 | 13 | 14 | 310 | 1 | 259 | 4.33e-15 | 76.3 |
MS.gene031603.t1 | AT1G13570 | 28.525 | 305 | 164 | 13 | 14 | 310 | 1 | 259 | 4.33e-15 | 76.3 |
MS.gene031603.t1 | AT5G56410 | 26.557 | 305 | 185 | 7 | 26 | 312 | 10 | 293 | 5.70e-15 | 76.3 |
MS.gene031603.t1 | AT5G02930 | 29.703 | 202 | 127 | 6 | 19 | 219 | 28 | 215 | 6.39e-15 | 75.9 |
MS.gene031603.t1 | AT5G56440 | 31.579 | 209 | 136 | 5 | 19 | 225 | 2 | 205 | 8.45e-15 | 75.5 |
MS.gene031603.t1 | AT1G05080 | 27.523 | 327 | 209 | 10 | 18 | 340 | 12 | 314 | 9.53e-15 | 75.1 |
MS.gene031603.t1 | AT5G22700 | 26.724 | 348 | 216 | 11 | 10 | 339 | 34 | 360 | 9.59e-15 | 75.5 |
MS.gene031603.t1 | AT5G27750 | 23.235 | 340 | 229 | 12 | 19 | 338 | 5 | 332 | 9.83e-15 | 74.7 |
MS.gene031603.t1 | AT5G52460 | 31.111 | 225 | 118 | 3 | 18 | 242 | 16 | 203 | 1.01e-14 | 74.7 |
MS.gene031603.t1 | AT5G56690 | 28.571 | 210 | 141 | 4 | 21 | 224 | 4 | 210 | 1.03e-14 | 75.1 |
MS.gene031603.t1 | AT5G38570 | 29.665 | 209 | 101 | 5 | 19 | 224 | 2 | 167 | 1.04e-14 | 74.7 |
MS.gene031603.t1 | AT1G78750 | 28.438 | 320 | 195 | 12 | 19 | 319 | 18 | 322 | 1.04e-14 | 75.1 |
MS.gene031603.t1 | AT1G78750 | 28.438 | 320 | 195 | 12 | 19 | 319 | 18 | 322 | 1.04e-14 | 75.1 |
MS.gene031603.t1 | AT3G26922 | 26.904 | 197 | 136 | 3 | 35 | 229 | 1 | 191 | 1.12e-14 | 73.6 |
MS.gene031603.t1 | AT3G26922 | 26.904 | 197 | 136 | 3 | 35 | 229 | 1 | 191 | 1.12e-14 | 73.6 |
MS.gene031603.t1 | AT3G03040 | 23.547 | 344 | 220 | 13 | 19 | 336 | 2 | 328 | 1.18e-14 | 75.1 |
MS.gene031603.t1 | AT5G27750 | 23.599 | 339 | 229 | 12 | 19 | 338 | 5 | 332 | 1.22e-14 | 75.1 |
MS.gene031603.t1 | AT2G26030 | 24.684 | 316 | 208 | 12 | 19 | 319 | 4 | 304 | 1.46e-14 | 74.7 |
MS.gene031603.t1 | AT2G26030 | 24.684 | 316 | 208 | 12 | 19 | 319 | 4 | 304 | 1.59e-14 | 74.7 |
MS.gene031603.t1 | AT2G26030 | 24.684 | 316 | 208 | 12 | 19 | 319 | 4 | 304 | 1.59e-14 | 74.7 |
MS.gene031603.t1 | AT5G44980 | 27.044 | 318 | 205 | 12 | 18 | 323 | 3 | 305 | 3.37e-14 | 72.8 |
MS.gene031603.t1 | AT5G44980 | 27.044 | 318 | 205 | 12 | 18 | 323 | 3 | 305 | 3.37e-14 | 72.8 |
MS.gene031603.t1 | AT3G28410 | 23.939 | 330 | 192 | 11 | 8 | 319 | 19 | 307 | 4.22e-14 | 73.6 |
MS.gene031603.t1 | AT3G50710 | 29.767 | 215 | 139 | 5 | 19 | 226 | 2 | 211 | 4.35e-14 | 73.2 |
MS.gene031603.t1 | AT5G44490 | 28.507 | 221 | 142 | 5 | 18 | 230 | 16 | 228 | 4.84e-14 | 73.2 |
MS.gene031603.t1 | AT5G44490 | 28.507 | 221 | 142 | 5 | 18 | 230 | 16 | 228 | 5.64e-14 | 73.2 |
MS.gene031603.t1 | AT1G78730 | 26.349 | 315 | 180 | 9 | 19 | 319 | 22 | 298 | 6.09e-14 | 72.8 |
MS.gene031603.t1 | AT5G41630 | 24.859 | 354 | 225 | 12 | 13 | 336 | 6 | 348 | 6.35e-14 | 72.8 |
MS.gene031603.t1 | AT5G22700 | 26.744 | 344 | 213 | 11 | 14 | 339 | 1 | 323 | 6.53e-14 | 72.8 |
MS.gene031603.t1 | AT5G22700 | 26.744 | 344 | 213 | 11 | 14 | 339 | 1 | 323 | 6.53e-14 | 72.8 |
MS.gene031603.t1 | AT5G22700 | 26.744 | 344 | 213 | 11 | 14 | 339 | 1 | 323 | 6.53e-14 | 72.8 |
MS.gene031603.t1 | AT5G22700 | 26.744 | 344 | 213 | 11 | 14 | 339 | 1 | 323 | 6.53e-14 | 72.8 |
MS.gene031603.t1 | AT1G69630 | 26.727 | 333 | 205 | 13 | 5 | 319 | 4 | 315 | 9.32e-14 | 72.4 |
MS.gene031603.t1 | AT3G59190 | 25.148 | 338 | 207 | 13 | 10 | 319 | 4 | 323 | 1.16e-13 | 71.6 |
MS.gene031603.t1 | AT3G59190 | 24.294 | 354 | 222 | 13 | 10 | 335 | 4 | 339 | 1.29e-13 | 72.0 |
MS.gene031603.t1 | AT3G49030 | 31.050 | 219 | 136 | 8 | 18 | 230 | 20 | 229 | 1.29e-13 | 71.6 |
MS.gene031603.t1 | AT5G25860 | 25.731 | 342 | 215 | 16 | 18 | 336 | 11 | 336 | 1.60e-13 | 71.6 |
MS.gene031603.t1 | AT3G49030 | 31.050 | 219 | 136 | 8 | 18 | 230 | 20 | 229 | 1.88e-13 | 71.2 |
MS.gene031603.t1 | AT4G27050 | 29.952 | 207 | 118 | 5 | 19 | 204 | 4 | 204 | 2.68e-13 | 70.9 |
MS.gene031603.t1 | AT4G27050 | 29.952 | 207 | 118 | 5 | 19 | 204 | 4 | 204 | 2.68e-13 | 70.9 |
MS.gene031603.t1 | AT4G27050 | 29.952 | 207 | 118 | 5 | 19 | 204 | 4 | 204 | 2.68e-13 | 70.9 |
MS.gene031603.t1 | AT4G27050 | 29.952 | 207 | 118 | 5 | 19 | 204 | 4 | 204 | 2.68e-13 | 70.9 |
MS.gene031603.t1 | AT4G27050 | 29.952 | 207 | 118 | 5 | 19 | 204 | 4 | 204 | 2.68e-13 | 70.9 |
MS.gene031603.t1 | AT5G53635 | 29.032 | 217 | 133 | 6 | 20 | 227 | 1 | 205 | 5.30e-13 | 70.1 |
MS.gene031603.t1 | AT3G58960 | 27.864 | 323 | 207 | 14 | 19 | 330 | 2 | 309 | 5.40e-13 | 70.1 |
MS.gene031603.t1 | AT5G60610 | 29.224 | 219 | 139 | 5 | 19 | 232 | 2 | 209 | 7.68e-13 | 69.3 |
MS.gene031603.t1 | AT5G60610 | 29.224 | 219 | 139 | 5 | 19 | 232 | 2 | 209 | 7.68e-13 | 69.3 |
MS.gene031603.t1 | AT5G22730 | 27.974 | 311 | 205 | 9 | 18 | 318 | 27 | 328 | 8.36e-13 | 69.3 |
MS.gene031603.t1 | AT5G22730 | 29.707 | 239 | 157 | 6 | 18 | 250 | 27 | 260 | 8.68e-13 | 69.3 |
MS.gene031603.t1 | AT5G22730 | 29.707 | 239 | 157 | 6 | 18 | 250 | 27 | 260 | 8.68e-13 | 69.3 |
MS.gene031603.t1 | AT3G51530 | 27.604 | 192 | 129 | 4 | 18 | 208 | 29 | 211 | 9.64e-13 | 69.3 |
MS.gene031603.t1 | AT2G26860 | 27.876 | 226 | 149 | 5 | 19 | 235 | 2 | 222 | 1.27e-12 | 68.6 |
MS.gene031603.t1 | AT2G26860 | 27.876 | 226 | 149 | 5 | 19 | 235 | 2 | 222 | 1.27e-12 | 68.6 |
MS.gene031603.t1 | AT5G53640 | 27.979 | 193 | 117 | 5 | 18 | 203 | 21 | 198 | 1.33e-12 | 67.0 |
MS.gene031603.t1 | AT3G49040 | 27.193 | 228 | 141 | 8 | 18 | 232 | 16 | 231 | 1.62e-12 | 67.8 |
MS.gene031603.t1 | AT5G02700 | 29.612 | 206 | 124 | 7 | 7 | 208 | 17 | 205 | 1.78e-12 | 68.6 |
MS.gene031603.t1 | AT5G41830 | 24.412 | 340 | 209 | 12 | 18 | 326 | 12 | 334 | 1.86e-12 | 68.6 |
MS.gene031603.t1 | AT5G22610 | 24.149 | 323 | 209 | 10 | 17 | 319 | 16 | 322 | 2.09e-12 | 68.2 |
MS.gene031603.t1 | AT4G00320 | 26.023 | 342 | 201 | 12 | 18 | 326 | 12 | 334 | 2.53e-12 | 68.2 |
MS.gene031603.t1 | AT3G44060 | 27.670 | 206 | 139 | 3 | 24 | 220 | 4 | 208 | 3.67e-12 | 67.4 |
MS.gene031603.t1 | AT5G50270 | 26.198 | 313 | 205 | 8 | 19 | 327 | 2 | 292 | 4.63e-12 | 66.2 |
MS.gene031603.t1 | AT5G44980 | 26.710 | 307 | 198 | 12 | 18 | 312 | 3 | 294 | 7.08e-12 | 66.6 |
MS.gene031603.t1 | AT5G44980 | 26.710 | 307 | 198 | 12 | 18 | 312 | 3 | 294 | 7.08e-12 | 66.6 |
MS.gene031603.t1 | AT3G03030 | 24.465 | 327 | 210 | 13 | 19 | 319 | 2 | 317 | 7.71e-12 | 65.9 |
MS.gene031603.t1 | AT5G38396 | 25.152 | 330 | 199 | 13 | 19 | 319 | 2 | 312 | 8.97e-12 | 66.2 |
MS.gene031603.t1 | AT2G42720 | 27.900 | 319 | 193 | 12 | 19 | 319 | 2 | 301 | 9.99e-12 | 66.2 |
MS.gene031603.t1 | AT5G22700 | 26.552 | 290 | 181 | 8 | 10 | 285 | 34 | 305 | 1.04e-11 | 65.9 |
MS.gene031603.t1 | AT4G26350 | 29.101 | 189 | 123 | 4 | 19 | 203 | 2 | 183 | 1.32e-11 | 65.9 |
MS.gene031603.t1 | AT3G26930 | 27.000 | 300 | 190 | 7 | 18 | 313 | 20 | 294 | 1.43e-11 | 65.5 |
MS.gene031603.t1 | AT5G44960 | 25.969 | 258 | 161 | 11 | 19 | 263 | 5 | 245 | 1.44e-11 | 65.5 |
MS.gene031603.t1 | AT3G03030 | 24.224 | 322 | 217 | 12 | 19 | 319 | 2 | 317 | 1.58e-11 | 65.5 |
MS.gene031603.t1 | AT3G42770 | 23.529 | 323 | 220 | 9 | 24 | 335 | 4 | 310 | 1.76e-11 | 65.5 |
MS.gene031603.t1 | AT5G41840 | 25.287 | 348 | 213 | 11 | 14 | 325 | 9 | 345 | 2.31e-11 | 65.1 |
MS.gene031603.t1 | AT5G56810 | 29.353 | 201 | 126 | 8 | 11 | 203 | 5 | 197 | 2.44e-11 | 64.3 |
MS.gene031603.t1 | AT5G50270 | 26.689 | 296 | 191 | 8 | 19 | 310 | 2 | 275 | 2.56e-11 | 64.7 |
MS.gene031603.t1 | AT5G56810 | 29.353 | 201 | 126 | 8 | 11 | 203 | 5 | 197 | 2.84e-11 | 64.7 |
MS.gene031603.t1 | AT5G02910 | 46.667 | 60 | 32 | 0 | 16 | 75 | 8 | 67 | 3.02e-11 | 64.3 |
MS.gene031603.t1 | AT5G02910 | 46.667 | 60 | 32 | 0 | 16 | 75 | 8 | 67 | 3.12e-11 | 64.3 |
MS.gene031603.t1 | AT1G22000 | 30.317 | 221 | 129 | 5 | 21 | 237 | 31 | 230 | 3.23e-11 | 64.7 |
MS.gene031603.t1 | AT5G22610 | 24.051 | 316 | 188 | 11 | 17 | 319 | 16 | 292 | 3.30e-11 | 64.7 |
MS.gene031603.t1 | AT5G02910 | 46.667 | 60 | 32 | 0 | 16 | 75 | 8 | 67 | 5.16e-11 | 63.9 |
MS.gene031603.t1 | AT3G58980 | 26.032 | 315 | 192 | 11 | 19 | 312 | 2 | 296 | 5.85e-11 | 63.9 |
MS.gene031603.t1 | AT3G58920 | 25.000 | 352 | 204 | 13 | 19 | 332 | 2 | 331 | 7.56e-11 | 63.5 |
Find 49 sgRNAs with CRISPR-Local
Find 55 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCATTATCCTTGACGATAT+TGG | 0.202752 | 4.3:+29141989 | None:intergenic |
ATGTTGCGATTTCCACATTA+AGG | 0.206909 | 4.3:-29142340 | MS.gene031603:CDS |
AGAGGGATAAATTCTATTAT+TGG | 0.223816 | 4.3:+29142209 | None:intergenic |
ACTTGAAATCTGAGAAACTA+TGG | 0.286675 | 4.3:+29142561 | None:intergenic |
AGAAGTTCTAACGGCGTCTT+TGG | 0.315218 | 4.3:+29142871 | None:intergenic |
TTAGCAGCAGAAGCTATTAT+AGG | 0.373178 | 4.3:+29142644 | None:intergenic |
CTTTGGATCTTATGCACATC+TGG | 0.376653 | 4.3:+29142974 | None:intergenic |
TGTCACCCACATTATGCCTT+TGG | 0.377548 | 4.3:+29142957 | None:intergenic |
TGTTGCGATTTCCACATTAA+GGG | 0.422533 | 4.3:-29142339 | MS.gene031603:CDS |
ACAATGGAGGTCAGGTTAAG+AGG | 0.430331 | 4.3:+29142191 | None:intergenic |
CTAGAGGTAGCACTCTCAAT+AGG | 0.433502 | 4.3:+29141968 | None:intergenic |
TACACAATGCCAACTCTTGT+AGG | 0.436890 | 4.3:+29142393 | None:intergenic |
CTCCATTGTTGTTGCATGTG+TGG | 0.461254 | 4.3:-29142177 | MS.gene031603:CDS |
AATTGCCTCTTTGATATTGT+GGG | 0.464505 | 4.3:-29142749 | MS.gene031603:CDS |
AAAGATCTTCAGCTTTCTCT+AGG | 0.469504 | 4.3:-29142611 | MS.gene031603:CDS |
GGAAACTCTTGAGGTATGTA+TGG | 0.483097 | 4.3:-29142042 | MS.gene031603:CDS |
GAATTGCCTCTTTGATATTG+TGG | 0.495488 | 4.3:-29142750 | MS.gene031603:CDS |
AGAAAGAATATAATGAAGAA+TGG | 0.504163 | 4.3:+29142904 | None:intergenic |
ACTAGCAATGTCTTCACACT+AGG | 0.511429 | 4.3:+29142476 | None:intergenic |
AATGCCAACTCTTGTAGGAC+AGG | 0.519062 | 4.3:+29142398 | None:intergenic |
ATATAATGAAGAATGGCATC+GGG | 0.519888 | 4.3:+29142911 | None:intergenic |
AACTGACTTCTCATTTGCAA+AGG | 0.521307 | 4.3:+29142442 | None:intergenic |
CAATGGAGGTCAGGTTAAGA+GGG | 0.521610 | 4.3:+29142192 | None:intergenic |
CTTGAAATCTGAGAAACTAT+GGG | 0.524464 | 4.3:+29142562 | None:intergenic |
AATATAATGAAGAATGGCAT+CGG | 0.525790 | 4.3:+29142910 | None:intergenic |
ATGCAACAACAATGGAGGTC+AGG | 0.531268 | 4.3:+29142183 | None:intergenic |
CGTGCAATTAAGTTATTGAG+TGG | 0.564973 | 4.3:-29142098 | MS.gene031603:CDS |
TAAGATCCAAAGGCATAATG+TGG | 0.572424 | 4.3:-29142963 | MS.gene031603:CDS |
CTAGGGAAACGAATACGACT+AGG | 0.579790 | 4.3:+29142494 | None:intergenic |
GTGCCCTGTCCTACAAGAGT+TGG | 0.580632 | 4.3:-29142402 | MS.gene031603:CDS |
CTTCTATATTATCATCAAAG+TGG | 0.581389 | 4.3:-29142853 | MS.gene031603:CDS |
CAAATCTCTCAAAATATCGA+AGG | 0.592683 | 4.3:-29142063 | MS.gene031603:CDS |
ATGAACTTCAAAATCAAAGA+CGG | 0.596207 | 4.3:+29142808 | None:intergenic |
ATCCACACATGCAACAACAA+TGG | 0.604459 | 4.3:+29142175 | None:intergenic |
CTAGCAATGTCTTCACACTA+GGG | 0.604984 | 4.3:+29142477 | None:intergenic |
AATGATCAAGACCCTTAATG+TGG | 0.609271 | 4.3:+29142328 | None:intergenic |
ATCGTCCCACAATATCAAAG+AGG | 0.616712 | 4.3:+29142744 | None:intergenic |
CATCAAAGTGGAGGTACCTG+TGG | 0.618068 | 4.3:-29142841 | MS.gene031603:CDS |
AATATCGAAGGAAACTCTTG+AGG | 0.622107 | 4.3:-29142051 | MS.gene031603:CDS |
CAGATGTGCATAAGATCCAA+AGG | 0.627449 | 4.3:-29142973 | MS.gene031603:CDS |
TGATAATATAGAAGTTCTAA+CGG | 0.635169 | 4.3:+29142862 | None:intergenic |
AGACGGATAATTGAGTCCAC+AGG | 0.649084 | 4.3:+29142825 | None:intergenic |
AGACTCTGCGTTAAAATACG+TGG | 0.651671 | 4.3:-29142695 | MS.gene031603:CDS |
AAGATCCAAAGGCATAATGT+GGG | 0.661125 | 4.3:-29142962 | MS.gene031603:CDS |
CACACATGCAACAACAATGG+AGG | 0.664413 | 4.3:+29142178 | None:intergenic |
CTATATTATCATCAAAGTGG+AGG | 0.668393 | 4.3:-29142850 | MS.gene031603:CDS |
TTGAAATCTGAGAAACTATG+GGG | 0.690741 | 4.3:+29142563 | None:intergenic |
ATGCCAACTCTTGTAGGACA+GGG | 0.696929 | 4.3:+29142399 | None:intergenic |
TAATTGCACGATGAGCAGCA+CGG | 0.762315 | 4.3:+29142111 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAAGAATATAATGAAGAA+TGG | + | chr4.3:29142065-29142084 | None:intergenic | 20.0% |
!!! | TGATAATATAGAAGTTCTAA+CGG | + | chr4.3:29142107-29142126 | None:intergenic | 20.0% |
! | AATATAATGAAGAATGGCAT+CGG | + | chr4.3:29142059-29142078 | None:intergenic | 25.0% |
! | AGAGGGATAAATTCTATTAT+TGG | + | chr4.3:29142760-29142779 | None:intergenic | 25.0% |
! | ATGAACTTCAAAATCAAAGA+CGG | + | chr4.3:29142161-29142180 | None:intergenic | 25.0% |
! | CTTCTATATTATCATCAAAG+TGG | - | chr4.3:29142113-29142132 | MS.gene031603:CDS | 25.0% |
!!! | CTGTCATTTTAAGAACATAA+AGG | - | chr4.3:29142597-29142616 | MS.gene031603:CDS | 25.0% |
!!! | CTTTGATTTTGAAGTTCATA+AGG | - | chr4.3:29142162-29142181 | MS.gene031603:CDS | 25.0% |
AATTGCCTCTTTGATATTGT+GGG | - | chr4.3:29142217-29142236 | MS.gene031603:CDS | 30.0% | |
ACTTGAAATCTGAGAAACTA+TGG | + | chr4.3:29142408-29142427 | None:intergenic | 30.0% | |
ATATAATGAAGAATGGCATC+GGG | + | chr4.3:29142058-29142077 | None:intergenic | 30.0% | |
CAAATCTCTCAAAATATCGA+AGG | - | chr4.3:29142903-29142922 | MS.gene031603:CDS | 30.0% | |
CTATATTATCATCAAAGTGG+AGG | - | chr4.3:29142116-29142135 | MS.gene031603:CDS | 30.0% | |
CTTGAAATCTGAGAAACTAT+GGG | + | chr4.3:29142407-29142426 | None:intergenic | 30.0% | |
TTGAAATCTGAGAAACTATG+GGG | + | chr4.3:29142406-29142425 | None:intergenic | 30.0% | |
! | TTTTCTTTCCAATATCGTCA+AGG | - | chr4.3:29142969-29142988 | MS.gene031603:CDS | 30.0% |
AAAGATCTTCAGCTTTCTCT+AGG | - | chr4.3:29142355-29142374 | MS.gene031603:CDS | 35.0% | |
AATATCGAAGGAAACTCTTG+AGG | - | chr4.3:29142915-29142934 | MS.gene031603:CDS | 35.0% | |
AATGATCAAGACCCTTAATG+TGG | + | chr4.3:29142641-29142660 | None:intergenic | 35.0% | |
ATGTTGCGATTTCCACATTA+AGG | - | chr4.3:29142626-29142645 | MS.gene031603:CDS | 35.0% | |
CGTGCAATTAAGTTATTGAG+TGG | - | chr4.3:29142868-29142887 | MS.gene031603:CDS | 35.0% | |
GAATTGCCTCTTTGATATTG+TGG | - | chr4.3:29142216-29142235 | MS.gene031603:CDS | 35.0% | |
TGTTGCGATTTCCACATTAA+GGG | - | chr4.3:29142627-29142646 | MS.gene031603:CDS | 35.0% | |
TTAGCAGCAGAAGCTATTAT+AGG | + | chr4.3:29142325-29142344 | None:intergenic | 35.0% | |
! | AACTGACTTCTCATTTGCAA+AGG | + | chr4.3:29142527-29142546 | None:intergenic | 35.0% |
! | AAGATCCAAAGGCATAATGT+GGG | - | chr4.3:29142004-29142023 | MS.gene031603:CDS | 35.0% |
! | TAAGATCCAAAGGCATAATG+TGG | - | chr4.3:29142003-29142022 | MS.gene031603:CDS | 35.0% |
ACTAGCAATGTCTTCACACT+AGG | + | chr4.3:29142493-29142512 | None:intergenic | 40.0% | |
AGACTCTGCGTTAAAATACG+TGG | - | chr4.3:29142271-29142290 | MS.gene031603:CDS | 40.0% | |
ATCCACACATGCAACAACAA+TGG | + | chr4.3:29142794-29142813 | None:intergenic | 40.0% | |
ATCGTCCCACAATATCAAAG+AGG | + | chr4.3:29142225-29142244 | None:intergenic | 40.0% | |
CAGATGTGCATAAGATCCAA+AGG | - | chr4.3:29141993-29142012 | MS.gene031603:CDS | 40.0% | |
CTAGCAATGTCTTCACACTA+GGG | + | chr4.3:29142492-29142511 | None:intergenic | 40.0% | |
CTTTGGATCTTATGCACATC+TGG | + | chr4.3:29141995-29142014 | None:intergenic | 40.0% | |
GGAAACTCTTGAGGTATGTA+TGG | - | chr4.3:29142924-29142943 | MS.gene031603:CDS | 40.0% | |
GGCATTATCCTTGACGATAT+TGG | + | chr4.3:29142980-29142999 | None:intergenic | 40.0% | |
TACACAATGCCAACTCTTGT+AGG | + | chr4.3:29142576-29142595 | None:intergenic | 40.0% | |
! | CAGTTCAACGTCTTTTCTCT+GGG | - | chr4.3:29142542-29142561 | MS.gene031603:CDS | 40.0% |
! | TCAGTTCAACGTCTTTTCTC+TGG | - | chr4.3:29142541-29142560 | MS.gene031603:CDS | 40.0% |
!! | TGGATTGCTTTTGCAGCTTA+AGG | + | chr4.3:29142740-29142759 | None:intergenic | 40.0% |
!!! | TCGCTGACTTCTGATCTTTT+TGG | + | chr4.3:29142198-29142217 | None:intergenic | 40.0% |
AATGCCAACTCTTGTAGGAC+AGG | + | chr4.3:29142571-29142590 | None:intergenic | 45.0% | |
ACAATGGAGGTCAGGTTAAG+AGG | + | chr4.3:29142778-29142797 | None:intergenic | 45.0% | |
AGACGGATAATTGAGTCCAC+AGG | + | chr4.3:29142144-29142163 | None:intergenic | 45.0% | |
ATGCAACAACAATGGAGGTC+AGG | + | chr4.3:29142786-29142805 | None:intergenic | 45.0% | |
ATGCCAACTCTTGTAGGACA+GGG | + | chr4.3:29142570-29142589 | None:intergenic | 45.0% | |
CAATGGAGGTCAGGTTAAGA+GGG | + | chr4.3:29142777-29142796 | None:intergenic | 45.0% | |
CACACATGCAACAACAATGG+AGG | + | chr4.3:29142791-29142810 | None:intergenic | 45.0% | |
CTAGGGAAACGAATACGACT+AGG | + | chr4.3:29142475-29142494 | None:intergenic | 45.0% | |
TAATTGCACGATGAGCAGCA+CGG | + | chr4.3:29142858-29142877 | None:intergenic | 45.0% | |
TGTCACCCACATTATGCCTT+TGG | + | chr4.3:29142012-29142031 | None:intergenic | 45.0% | |
! | AGAAGTTCTAACGGCGTCTT+TGG | + | chr4.3:29142098-29142117 | None:intergenic | 45.0% |
! | CTCCATTGTTGTTGCATGTG+TGG | - | chr4.3:29142789-29142808 | MS.gene031603:CDS | 45.0% |
!! | CATCAAAGTGGAGGTACCTG+TGG | - | chr4.3:29142125-29142144 | MS.gene031603:CDS | 50.0% |
GTGCCCTGTCCTACAAGAGT+TGG | - | chr4.3:29142564-29142583 | MS.gene031603:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 29141983 | 29143005 | 29141983 | ID=MS.gene031603 |
chr4.3 | mRNA | 29141983 | 29143005 | 29141983 | ID=MS.gene031603.t1;Parent=MS.gene031603 |
chr4.3 | exon | 29141983 | 29143005 | 29141983 | ID=MS.gene031603.t1.exon1;Parent=MS.gene031603.t1 |
chr4.3 | CDS | 29141983 | 29143005 | 29141983 | ID=cds.MS.gene031603.t1;Parent=MS.gene031603.t1 |
Gene Sequence |
Protein sequence |