AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032862


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032862.t1 MTR_5g039970 93.478 322 21 0 1 322 1 322 0.0 568
MS.gene032862.t1 MTR_4g080590 56.044 455 189 6 1 454 5 449 1.76e-158 456
MS.gene032862.t1 MTR_4g080787 51.606 467 204 8 3 456 6 463 1.38e-135 399
MS.gene032862.t1 MTR_4g130200 52.328 451 145 6 9 457 10 392 1.12e-134 393
MS.gene032862.t1 MTR_4g080773 50.855 468 211 7 3 457 6 467 3.71e-132 391
MS.gene032862.t1 MTR_4g080773 50.855 468 211 7 3 457 6 467 4.15e-132 390
MS.gene032862.t1 MTR_4g080590 54.645 366 156 4 1 366 5 360 6.49e-121 358
MS.gene032862.t1 MTR_3g048290 47.872 470 221 6 1 456 5 464 9.09e-119 356
MS.gene032862.t1 MTR_7g023310 48.498 466 216 10 1 456 5 456 5.19e-118 353
MS.gene032862.t1 MTR_5g039950 45.887 462 199 8 1 457 5 420 9.58e-112 336
MS.gene032862.t1 MTR_7g023330 42.208 462 193 9 2 457 3 396 3.77e-95 292
MS.gene032862.t1 MTR_7g039630 43.603 383 162 6 1 372 5 344 3.28e-86 268
MS.gene032862.t1 MTR_4g081030 38.496 452 205 8 9 457 7 388 8.45e-73 234
MS.gene032862.t1 MTR_2g094750 44.415 376 175 10 17 364 88 457 5.17e-72 235
MS.gene032862.t1 MTR_4g080807 41.783 359 171 4 90 447 1 322 7.64e-69 225
MS.gene032862.t1 MTR_4g032845 27.725 422 274 13 17 423 1 406 2.26e-26 111
MS.gene032862.t1 MTR_4g080813 70.769 65 19 0 1 65 1 65 2.91e-26 102
MS.gene032862.t1 MTR_5g005690 26.030 461 296 9 5 428 3 455 2.58e-25 108
MS.gene032862.t1 MTR_2g072730 27.660 423 272 17 18 423 15 420 4.04e-22 99.0
MS.gene032862.t1 MTR_2g072530 24.835 455 319 11 11 456 5 445 1.65e-20 94.0
MS.gene032862.t1 MTR_2g094450 38.298 188 89 6 195 376 31 197 8.35e-20 87.8
MS.gene032862.t1 MTR_2g072720 25.877 456 308 15 7 450 31 468 9.20e-20 92.0
MS.gene032862.t1 MTR_1g082260 36.806 144 88 2 82 222 32 175 1.11e-19 87.0
MS.gene032862.t1 MTR_1g115250 26.591 440 284 14 7 437 20 429 4.51e-19 89.7
MS.gene032862.t1 MTR_6g018660 27.949 390 229 12 1 363 1 365 1.81e-18 87.4
MS.gene032862.t1 MTR_2g082800 24.586 423 285 14 7 421 14 410 2.08e-18 87.4
MS.gene032862.t1 MTR_2g007450 23.570 437 245 14 19 425 16 393 3.00e-18 87.0
MS.gene032862.t1 MTR_5g080710 25.571 438 279 15 2 425 17 421 3.04e-18 87.4
MS.gene032862.t1 MTR_8g467800 26.526 475 288 21 10 456 11 452 5.82e-18 86.3
MS.gene032862.t1 MTR_8g062270 26.623 462 297 16 16 456 13 453 8.99e-18 85.9
MS.gene032862.t1 MTR_8g014260 25.676 444 297 12 18 447 15 439 9.97e-17 82.4
MS.gene032862.t1 MTR_8g445780 26.290 407 269 14 11 409 6 389 4.58e-16 80.1
MS.gene032862.t1 MTR_8g058965 26.256 438 274 16 15 425 9 424 5.51e-16 80.5
MS.gene032862.t1 MTR_3g023470 27.011 348 198 11 18 341 14 329 2.58e-15 77.8
MS.gene032862.t1 MTR_8g467800 26.685 356 219 13 10 346 11 343 3.87e-15 77.0
MS.gene032862.t1 MTR_4g098590 22.824 425 240 13 21 426 1 356 6.03e-15 76.6
MS.gene032862.t1 MTR_5g084070 25.472 424 276 13 10 425 4 395 7.17e-15 76.6
MS.gene032862.t1 MTR_3g448340 24.945 453 261 19 19 424 6 426 8.79e-15 76.6
MS.gene032862.t1 MTR_4g056020 24.832 447 281 17 16 436 6 423 1.05e-14 76.3
MS.gene032862.t1 MTR_8g062080 24.769 432 259 18 19 425 23 413 1.16e-14 76.3
MS.gene032862.t1 MTR_4g045900 23.673 490 295 16 19 444 26 500 1.83e-14 75.9
MS.gene032862.t1 MTR_3g036320 26.748 329 209 11 21 337 22 330 2.07e-14 74.7
MS.gene032862.t1 MTR_3g108560 28.796 191 121 3 14 202 15 192 2.59e-14 73.9
MS.gene032862.t1 MTR_2g007400 23.851 457 237 16 19 444 12 388 4.27e-14 74.3
MS.gene032862.t1 MTR_1g011410 26.667 390 218 14 2 366 287 633 4.60e-14 74.7
MS.gene032862.t1 MTR_1g011410 24.791 359 206 8 14 369 2 299 2.43e-11 66.2
MS.gene032862.t1 MTR_3g108560 28.796 191 121 3 14 202 15 192 4.68e-14 73.9
MS.gene032862.t1 MTR_3g036250 28.866 194 123 6 16 202 2 187 7.22e-14 73.2
MS.gene032862.t1 MTR_8g014160 32.000 200 117 8 18 202 40 235 9.62e-14 73.2
MS.gene032862.t1 MTR_7g056447 32.447 188 112 6 18 200 8 185 1.15e-13 71.6
MS.gene032862.t1 MTR_2g082850 25.348 359 238 15 18 362 21 363 2.38e-13 71.6
MS.gene032862.t1 MTR_0049s0110 24.641 418 264 14 19 424 8 386 2.43e-13 72.0
MS.gene032862.t1 MTR_4g056030 24.091 440 293 16 16 436 6 423 2.48e-13 72.0
MS.gene032862.t1 MTR_0049s0110 24.719 356 227 10 19 371 8 325 5.03e-13 70.5
MS.gene032862.t1 MTR_5g092960 23.729 472 323 16 1 449 1 458 5.49e-13 71.2
MS.gene032862.t1 MTR_7g084080 28.016 257 161 8 18 264 16 258 6.59e-13 69.7
MS.gene032862.t1 MTR_1g115245 26.154 260 164 10 10 258 17 259 9.78e-13 69.3
MS.gene032862.t1 MTR_4g050250 26.371 383 245 15 10 368 12 381 1.11e-12 70.1
MS.gene032862.t1 MTR_2g008320 23.765 425 244 15 19 432 52 407 1.31e-12 69.7
MS.gene032862.t1 MTR_1g038710 24.256 437 274 16 19 425 19 428 1.52e-12 69.7
MS.gene032862.t1 MTR_8g062310 24.178 426 258 17 15 425 21 396 1.61e-12 69.3
MS.gene032862.t1 MTR_3g108150 31.250 192 110 5 18 202 12 188 2.01e-12 68.9
MS.gene032862.t1 MTR_7g098570 30.180 222 119 9 1 206 2 203 2.11e-12 69.3
MS.gene032862.t1 MTR_3g023270 24.620 329 218 9 18 339 11 316 2.57e-12 68.6
MS.gene032862.t1 MTR_7g098480 28.436 211 128 8 1 202 1 197 2.63e-12 68.9
MS.gene032862.t1 MTR_3g105060 26.316 190 136 2 19 208 14 199 2.64e-12 68.6
MS.gene032862.t1 MTR_0049s0110 24.576 354 226 10 19 369 8 323 2.68e-12 68.2
MS.gene032862.t1 MTR_4g090940 25.656 343 211 11 18 341 158 475 3.93e-12 68.6
MS.gene032862.t1 MTR_3g023440 26.791 321 204 10 17 327 1 300 5.43e-12 67.8
MS.gene032862.t1 MTR_3g019240 26.453 344 216 15 18 346 25 346 5.47e-12 67.8
MS.gene032862.t1 MTR_7g056433 32.124 193 122 5 16 204 9 196 6.02e-12 67.4
MS.gene032862.t1 MTR_0492s0020 30.811 185 117 5 18 202 85 258 8.65e-12 67.4
MS.gene032862.t1 MTR_0543s0010 30.811 185 117 5 18 202 85 258 8.67e-12 67.4
MS.gene032862.t1 MTR_5g021550 39.535 86 50 1 18 101 18 103 1.42e-11 63.2
MS.gene032862.t1 MTR_3g023630 27.358 212 147 4 19 227 8 215 1.50e-11 66.2
MS.gene032862.t1 MTR_3g005980 25.000 328 201 8 10 315 8 312 3.35e-11 65.1
MS.gene032862.t1 MTR_7g080440 24.198 343 199 11 10 325 6 314 3.52e-11 65.1
MS.gene032862.t1 MTR_1g011400 26.047 430 252 17 19 424 7 394 4.69e-11 65.1
MS.gene032862.t1 MTR_4g050940 26.667 345 206 13 19 343 67 384 4.96e-11 65.1
MS.gene032862.t1 MTR_0049s0110 28.947 190 130 5 19 207 8 193 5.89e-11 63.5
MS.gene032862.t1 MTR_5g087940 25.706 354 205 13 13 345 20 336 7.75e-11 64.3
MS.gene032862.t1 MTR_4g051460 46.032 63 34 0 18 80 4 66 7.92e-11 58.2
MS.gene032862.t1 MTR_4g092320 46.032 63 34 0 18 80 4 66 7.92e-11 58.2
MS.gene032862.t1 MTR_4g050930 26.257 358 218 15 6 343 16 347 9.56e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032862.t1 AT4G14096 29.247 465 269 18 13 447 2 436 1.96e-35 137
MS.gene032862.t1 AT4G14096 29.247 465 269 18 13 447 2 436 1.96e-35 137
MS.gene032862.t1 AT4G14103 30.851 376 211 15 13 364 2 352 8.76e-35 134
MS.gene032862.t1 AT4G14103 30.851 376 211 15 13 364 2 352 8.76e-35 134
MS.gene032862.t1 AT4G14103 30.851 376 211 15 13 364 2 352 2.35e-34 134
MS.gene032862.t1 AT3G59210 28.125 480 278 18 18 455 6 460 4.71e-32 128
MS.gene032862.t1 AT3G59210 28.125 480 278 18 18 455 6 460 4.71e-32 128
MS.gene032862.t1 AT3G59210 28.125 480 278 18 18 455 6 460 4.71e-32 128
MS.gene032862.t1 AT3G59210 28.125 480 278 18 18 455 6 460 4.71e-32 128
MS.gene032862.t1 AT3G59210 28.125 480 278 18 18 455 6 460 4.71e-32 128
MS.gene032862.t1 AT3G59200 28.191 376 219 13 19 364 7 361 1.96e-29 118
MS.gene032862.t1 AT1G66290 26.859 417 278 13 15 424 25 421 3.30e-28 116
MS.gene032862.t1 AT3G59200 28.191 376 219 13 19 364 7 361 5.93e-28 116
MS.gene032862.t1 AT1G58310 28.087 413 239 15 13 385 2 396 1.23e-26 112
MS.gene032862.t1 AT1G78750 26.852 432 285 13 19 433 18 435 6.21e-26 110
MS.gene032862.t1 AT1G78750 26.852 432 285 13 19 433 18 435 6.21e-26 110
MS.gene032862.t1 AT3G59240 29.086 361 225 12 18 364 7 350 1.10e-25 110
MS.gene032862.t1 AT5G22730 27.103 428 267 13 18 422 27 432 1.51e-25 109
MS.gene032862.t1 AT5G22730 27.103 428 267 13 18 422 27 432 1.51e-25 109
MS.gene032862.t1 AT3G59230 25.155 485 309 16 10 455 4 473 2.90e-25 108
MS.gene032862.t1 AT1G13780 26.389 432 269 16 19 422 10 420 6.12e-25 107
MS.gene032862.t1 AT1G16930 25.229 436 278 16 19 427 15 429 6.33e-25 107
MS.gene032862.t1 AT1G16930 25.229 436 278 16 19 427 15 429 6.33e-25 107
MS.gene032862.t1 AT1G16930 25.229 436 278 16 19 427 15 429 6.33e-25 107
MS.gene032862.t1 AT3G59250 27.609 460 258 18 13 449 2 409 1.40e-24 105
MS.gene032862.t1 AT3G58880 27.586 464 295 16 17 455 1 448 3.29e-24 105
MS.gene032862.t1 AT1G69630 25.843 445 282 17 11 433 10 428 8.39e-24 103
MS.gene032862.t1 AT3G59190 26.330 376 244 12 10 364 4 367 1.48e-23 102
MS.gene032862.t1 AT1G66300 24.940 417 284 12 19 424 29 427 1.61e-23 103
MS.gene032862.t1 AT4G00320 25.956 497 295 18 18 455 12 494 1.69e-23 103
MS.gene032862.t1 AT5G27750 25.694 432 283 15 19 424 5 424 2.10e-23 102
MS.gene032862.t1 AT4G22280 29.494 356 216 11 19 366 2 330 2.26e-23 100
MS.gene032862.t1 AT3G58860 27.324 355 235 12 19 367 7 344 2.61e-23 102
MS.gene032862.t1 AT5G38590 27.027 444 271 12 19 450 2 404 4.53e-23 101
MS.gene032862.t1 AT3G59190 26.330 376 244 12 10 364 4 367 5.02e-23 102
MS.gene032862.t1 AT5G41840 25.849 383 243 13 14 364 9 382 6.92e-23 101
MS.gene032862.t1 AT5G22670 26.969 419 276 9 18 424 10 410 7.85e-23 100
MS.gene032862.t1 AT4G22280 29.494 356 216 11 19 366 2 330 8.23e-23 100
MS.gene032862.t1 AT5G53840 27.556 450 286 17 15 452 14 435 8.93e-23 100
MS.gene032862.t1 AT4G10400 26.770 452 262 16 19 449 2 405 1.14e-22 100
MS.gene032862.t1 AT4G10400 26.770 452 262 16 19 449 2 405 1.14e-22 100
MS.gene032862.t1 AT4G10400 26.770 452 262 16 19 449 2 405 1.14e-22 100
MS.gene032862.t1 AT3G26922 28.571 224 151 2 6 227 1 217 1.95e-22 97.8
MS.gene032862.t1 AT3G26922 28.571 224 151 2 6 227 1 217 1.95e-22 97.8
MS.gene032862.t1 AT2G29930 27.191 445 267 19 10 424 4 421 6.37e-22 98.6
MS.gene032862.t1 AT2G29930 27.191 445 267 19 10 424 4 421 6.37e-22 98.6
MS.gene032862.t1 AT3G58960 25.979 485 292 20 19 456 2 466 1.03e-21 97.8
MS.gene032862.t1 AT5G41830 27.882 373 229 14 18 364 12 370 2.53e-21 97.1
MS.gene032862.t1 AT3G59160 26.316 494 278 20 10 456 5 459 3.96e-21 95.9
MS.gene032862.t1 AT4G13965 28.774 212 138 4 19 227 10 211 5.82e-21 95.1
MS.gene032862.t1 AT5G25860 25.778 450 284 17 18 444 11 433 9.03e-21 94.7
MS.gene032862.t1 AT2G42730 25.658 456 288 17 16 442 2 435 2.13e-20 94.0
MS.gene032862.t1 AT3G58980 25.951 447 282 16 19 437 2 427 2.46e-20 94.4
MS.gene032862.t1 AT1G78840 27.660 423 267 15 18 424 4 403 3.63e-20 92.8
MS.gene032862.t1 AT1G78840 27.660 423 267 15 18 424 4 403 3.63e-20 92.8
MS.gene032862.t1 AT1G51370 25.416 421 274 15 14 424 14 404 3.95e-20 92.8
MS.gene032862.t1 AT5G27750 25.199 377 248 12 19 372 5 370 4.63e-20 92.0
MS.gene032862.t1 AT3G52680 24.301 465 299 13 1 447 1 430 4.98e-20 92.8
MS.gene032862.t1 AT2G04230 26.124 467 263 18 18 448 12 432 5.46e-20 92.4
MS.gene032862.t1 AT3G59170 28.680 394 221 14 18 364 6 386 7.12e-20 92.4
MS.gene032862.t1 AT5G22660 27.451 459 293 16 18 457 12 449 8.66e-20 92.0
MS.gene032862.t1 AT3G03030 26.196 439 286 17 19 428 2 431 1.14e-19 91.7
MS.gene032862.t1 AT3G58920 27.062 388 233 14 19 373 2 372 1.38e-19 91.7
MS.gene032862.t1 AT3G50710 26.174 447 285 14 19 450 2 418 1.56e-19 90.9
MS.gene032862.t1 AT4G27050 27.807 374 222 17 19 366 4 355 2.51e-19 90.5
MS.gene032862.t1 AT4G27050 27.807 374 222 17 19 366 4 355 2.51e-19 90.5
MS.gene032862.t1 AT4G27050 27.807 374 222 17 19 366 4 355 2.51e-19 90.5
MS.gene032862.t1 AT4G27050 27.807 374 222 17 19 366 4 355 2.51e-19 90.5
MS.gene032862.t1 AT4G27050 27.807 374 222 17 19 366 4 355 2.51e-19 90.5
MS.gene032862.t1 AT1G56610 27.882 373 236 10 21 375 12 369 2.81e-19 90.5
MS.gene032862.t1 AT1G78730 24.048 420 252 15 19 424 22 388 3.00e-19 90.1
MS.gene032862.t1 AT4G09920 27.532 316 193 9 19 325 2 290 4.41e-19 87.8
MS.gene032862.t1 AT4G09920 27.532 316 193 9 19 325 2 290 4.41e-19 87.8
MS.gene032862.t1 AT4G09920 27.532 316 193 9 19 325 2 290 4.41e-19 87.8
MS.gene032862.t1 AT1G56610 27.882 373 236 10 21 375 75 432 4.42e-19 90.1
MS.gene032862.t1 AT5G44490 24.714 437 284 14 18 432 16 429 7.58e-19 89.4
MS.gene032862.t1 AT5G44490 24.714 437 284 14 18 432 16 429 1.10e-18 89.0
MS.gene032862.t1 AT4G00315 30.973 226 138 7 19 233 2 220 1.10e-18 88.6
MS.gene032862.t1 AT5G56440 26.340 429 260 18 19 424 2 397 1.23e-18 88.2
MS.gene032862.t1 AT2G26030 24.648 426 281 17 19 422 4 411 1.46e-18 88.2
MS.gene032862.t1 AT4G00160 24.569 464 286 17 18 456 15 439 1.52e-18 88.2
MS.gene032862.t1 AT4G09920 29.482 251 156 6 19 260 2 240 1.78e-18 86.7
MS.gene032862.t1 AT4G09920 29.482 251 156 6 19 260 2 240 1.78e-18 86.7
MS.gene032862.t1 AT2G26030 24.883 426 275 17 19 422 4 406 2.03e-18 87.8
MS.gene032862.t1 AT2G26030 24.883 426 275 17 19 422 4 406 2.03e-18 87.8
MS.gene032862.t1 AT1G66310 25.416 421 279 14 16 424 16 413 2.08e-18 87.8
MS.gene032862.t1 AT1G55030 29.167 216 139 3 15 227 5 209 3.92e-18 86.7
MS.gene032862.t1 AT1G55030 29.167 216 139 3 15 227 15 219 4.01e-18 86.7
MS.gene032862.t1 AT3G62440 26.304 460 285 17 19 442 2 443 4.29e-18 87.0
MS.gene032862.t1 AT3G59180 25.935 401 230 16 105 455 62 445 4.57e-18 87.0
MS.gene032862.t1 AT5G22610 25.472 424 260 17 17 422 16 401 7.91e-18 86.3
MS.gene032862.t1 AT5G18780 25.420 417 285 11 15 422 7 406 1.13e-17 85.5
MS.gene032862.t1 AT5G18780 25.420 417 285 11 15 422 7 406 1.13e-17 85.5
MS.gene032862.t1 AT3G03030 27.726 321 215 11 19 327 2 317 1.21e-17 84.3
MS.gene032862.t1 AT3G58900 26.304 441 279 16 19 428 2 427 1.21e-17 85.5
MS.gene032862.t1 AT1G78760 25.059 427 270 17 18 424 15 411 1.26e-17 85.5
MS.gene032862.t1 AT5G56810 31.034 232 127 8 11 226 5 219 1.31e-17 84.0
MS.gene032862.t1 AT3G58930 25.658 456 273 19 19 428 2 437 1.38e-17 85.5
MS.gene032862.t1 AT3G58930 25.658 456 273 19 19 428 2 437 1.38e-17 85.5
MS.gene032862.t1 AT3G58930 25.658 456 273 19 19 428 2 437 1.38e-17 85.5
MS.gene032862.t1 AT5G38590 28.136 295 186 6 19 310 2 273 1.43e-17 83.2
MS.gene032862.t1 AT2G29910 25.439 342 215 11 18 339 4 325 1.63e-17 84.0
MS.gene032862.t1 AT2G29910 25.439 342 215 11 18 339 4 325 1.63e-17 84.0
MS.gene032862.t1 AT1G55660 28.512 242 157 7 14 246 48 282 2.17e-17 84.0
MS.gene032862.t1 AT2G29910 25.575 348 210 12 18 337 4 330 2.42e-17 83.6
MS.gene032862.t1 AT2G29910 25.575 348 210 12 18 337 4 330 2.42e-17 83.6
MS.gene032862.t1 AT2G29910 25.575 348 210 12 18 337 4 330 2.42e-17 83.6
MS.gene032862.t1 AT2G29910 25.575 348 210 12 18 337 4 330 2.42e-17 83.6
MS.gene032862.t1 AT5G22730 26.287 369 228 12 18 364 27 373 3.30e-17 83.6
MS.gene032862.t1 AT1G55660 28.512 242 157 7 14 246 48 282 4.14e-17 84.0
MS.gene032862.t1 AT3G49150 26.367 311 206 10 18 316 15 314 4.17e-17 84.0
MS.gene032862.t1 AT2G29910 25.575 348 210 12 18 337 28 354 4.18e-17 83.2
MS.gene032862.t1 AT5G22700 25.708 424 287 11 10 421 34 441 4.57e-17 84.0
MS.gene032862.t1 AT4G13985 24.545 440 275 16 15 424 15 427 4.88e-17 83.6
MS.gene032862.t1 AT5G56410 28.311 219 142 3 26 229 10 228 5.13e-17 84.0
MS.gene032862.t1 AT5G56810 31.034 232 127 8 11 226 5 219 5.18e-17 83.6
MS.gene032862.t1 AT3G49020 25.108 462 280 19 9 447 12 430 5.25e-17 83.6
MS.gene032862.t1 AT5G44950 25.814 430 269 16 18 424 3 405 6.37e-17 83.2
MS.gene032862.t1 AT3G44060 25.000 356 233 12 24 367 4 337 6.83e-17 82.8
MS.gene032862.t1 AT3G52680 28.926 242 155 5 1 234 1 233 7.76e-17 82.4
MS.gene032862.t1 AT3G60040 27.378 347 202 14 18 337 12 335 7.97e-17 83.6
MS.gene032862.t1 AT1G51370 25.515 388 250 14 14 392 14 371 8.38e-17 82.8
MS.gene032862.t1 AT3G60040 27.378 347 202 14 18 337 231 554 9.98e-17 83.2
MS.gene032862.t1 AT5G22610 24.661 442 271 17 17 422 16 431 1.07e-16 82.8
MS.gene032862.t1 AT3G60040 27.378 347 202 14 18 337 232 555 1.19e-16 83.2
MS.gene032862.t1 AT3G60040 27.378 347 202 14 18 337 229 552 1.20e-16 83.2
MS.gene032862.t1 AT3G28410 26.005 373 232 16 7 368 18 357 1.31e-16 82.4
MS.gene032862.t1 AT4G15060 28.000 225 152 5 13 231 18 238 1.36e-16 82.0
MS.gene032862.t1 AT3G60040 27.378 347 202 14 18 337 231 554 1.44e-16 83.2
MS.gene032862.t1 AT3G03040 25.745 369 236 14 19 364 2 355 1.54e-16 82.0
MS.gene032862.t1 AT3G44810 29.851 268 166 9 24 279 12 269 1.59e-16 82.0
MS.gene032862.t1 AT1G13780 25.378 331 208 11 19 325 10 325 1.69e-16 80.9
MS.gene032862.t1 AT1G66320 23.168 423 291 14 15 424 25 426 2.00e-16 81.6
MS.gene032862.t1 AT3G49040 29.956 227 132 9 18 232 16 227 2.07e-16 80.1
MS.gene032862.t1 AT5G22700 25.714 420 284 11 14 421 1 404 3.88e-16 80.9
MS.gene032862.t1 AT5G22700 25.714 420 284 11 14 421 1 404 3.88e-16 80.9
MS.gene032862.t1 AT5G22700 25.714 420 284 11 14 421 1 404 3.88e-16 80.9
MS.gene032862.t1 AT5G22700 25.714 420 284 11 14 421 1 404 3.88e-16 80.9
MS.gene032862.t1 AT5G22720 24.829 439 266 18 18 422 22 430 4.06e-16 80.9
MS.gene032862.t1 AT1G51370 25.788 349 227 12 18 364 18 336 5.29e-16 79.7
MS.gene032862.t1 AT5G41630 25.000 352 233 10 13 339 6 351 5.80e-16 80.5
MS.gene032862.t1 AT1G06630 26.503 366 227 15 18 366 11 351 1.04e-15 79.0
MS.gene032862.t1 AT1G06630 26.503 366 227 15 18 366 11 351 1.04e-15 79.0
MS.gene032862.t1 AT3G59150 25.624 441 281 15 19 425 13 440 1.40e-15 79.3
MS.gene032862.t1 AT3G58930 25.169 445 255 18 19 428 2 403 1.41e-15 79.0
MS.gene032862.t1 AT3G58930 25.169 445 255 18 19 428 2 403 1.41e-15 79.0
MS.gene032862.t1 AT2G26860 24.221 417 267 13 19 416 2 388 1.42e-15 79.0
MS.gene032862.t1 AT2G26860 24.221 417 267 13 19 416 2 388 1.42e-15 79.0
MS.gene032862.t1 AT1G06630 26.575 365 226 15 19 366 21 360 1.51e-15 79.0
MS.gene032862.t1 AT1G06630 26.575 365 226 15 19 366 12 351 1.71e-15 78.6
MS.gene032862.t1 AT1G06630 26.575 365 226 15 19 366 12 351 1.71e-15 78.6
MS.gene032862.t1 AT1G06630 26.575 365 226 15 19 366 12 351 1.71e-15 78.6
MS.gene032862.t1 AT1G06630 26.575 365 226 15 19 366 12 351 1.71e-15 78.6
MS.gene032862.t1 AT3G58900 28.125 320 213 11 19 328 2 314 2.29e-15 77.4
MS.gene032862.t1 AT1G06630 26.575 365 226 15 19 366 12 351 2.88e-15 78.2
MS.gene032862.t1 AT3G26930 28.767 219 144 2 18 236 20 226 3.13e-15 78.2
MS.gene032862.t1 AT3G59000 26.932 453 276 23 19 435 2 435 4.15e-15 77.8
MS.gene032862.t1 AT3G49030 25.111 450 283 18 18 450 20 432 5.39e-15 77.4
MS.gene032862.t1 AT3G49030 28.169 213 144 4 18 227 20 226 5.41e-15 77.0
MS.gene032862.t1 AT3G58900 27.900 319 213 11 19 327 2 313 5.62e-15 76.3
MS.gene032862.t1 AT3G58900 27.900 319 213 11 19 327 2 313 5.62e-15 76.3
MS.gene032862.t1 AT4G26340 25.598 418 257 13 19 419 2 382 6.60e-15 77.0
MS.gene032862.t1 AT3G42770 24.648 426 284 17 24 437 4 404 8.70e-15 77.0
MS.gene032862.t1 AT5G35926 28.800 250 136 9 141 357 51 291 9.85e-15 76.3
MS.gene032862.t1 AT4G15060 27.234 235 158 6 19 246 172 400 1.03e-14 76.6
MS.gene032862.t1 AT5G38396 23.977 342 227 11 19 339 2 331 1.10e-14 76.3
MS.gene032862.t1 AT1G21990 24.416 385 224 15 18 366 8 361 1.17e-14 76.3
MS.gene032862.t1 AT5G18770 23.294 425 285 13 18 422 23 426 1.68e-14 75.9
MS.gene032862.t1 AT5G44980 24.835 455 292 20 18 449 3 430 2.93e-14 75.1
MS.gene032862.t1 AT5G44980 24.835 455 292 20 18 449 3 430 2.93e-14 75.1
MS.gene032862.t1 AT3G51530 24.330 448 283 20 18 447 29 438 3.87e-14 74.7
MS.gene032862.t1 AT1G56610 27.465 284 184 6 107 375 54 330 4.05e-14 74.3
MS.gene032862.t1 AT3G26922 25.128 195 137 2 35 227 1 188 5.59e-14 72.4
MS.gene032862.t1 AT3G26922 25.128 195 137 2 35 227 1 188 5.59e-14 72.4
MS.gene032862.t1 AT5G18780 25.000 360 247 9 9 362 1 343 6.27e-14 73.6
MS.gene032862.t1 AT5G18780 25.000 360 247 9 9 362 1 343 6.27e-14 73.6
MS.gene032862.t1 AT5G35926 27.572 243 147 7 141 364 51 283 6.40e-14 73.9
MS.gene032862.t1 AT5G56820 23.077 416 268 13 19 424 15 388 7.45e-14 73.6
MS.gene032862.t1 AT2G42720 26.075 372 220 14 19 364 2 344 7.67e-14 73.6
MS.gene032862.t1 AT4G10420 25.753 299 174 8 140 424 27 291 8.00e-14 72.8
MS.gene032862.t1 AT2G29930 26.364 330 187 14 122 424 1 301 8.35e-14 72.8
MS.gene032862.t1 AT5G38570 26.355 406 219 17 19 416 2 335 8.74e-14 73.2
MS.gene032862.t1 AT1G32375 23.389 419 278 14 19 424 2 390 9.26e-14 73.2
MS.gene032862.t1 AT1G32375 23.389 419 278 14 19 424 2 390 9.26e-14 73.2
MS.gene032862.t1 AT5G15620 26.185 443 274 18 19 439 2 413 1.09e-13 73.2
MS.gene032862.t1 AT5G53635 27.650 217 139 5 20 229 1 206 1.40e-13 72.8
MS.gene032862.t1 AT1G06630 27.338 278 168 12 18 279 11 270 2.04e-13 71.2
MS.gene032862.t1 AT1G52650 24.887 442 277 19 19 428 2 420 2.12e-13 72.4
MS.gene032862.t1 AT5G02930 24.776 335 190 16 13 322 24 321 2.24e-13 72.4
MS.gene032862.t1 AT5G18770 23.810 357 253 10 18 367 23 367 2.66e-13 71.6
MS.gene032862.t1 AT4G26350 23.434 431 276 15 19 428 2 399 3.71e-13 71.6
MS.gene032862.t1 AT3G58940 25.393 445 271 19 19 435 2 413 6.86e-13 71.2
MS.gene032862.t1 AT3G58940 25.393 445 271 19 19 435 2 413 6.86e-13 71.2
MS.gene032862.t1 AT5G62970 24.265 408 253 14 26 401 10 393 1.29e-12 70.1
MS.gene032862.t1 AT1G48400 30.035 283 172 15 18 286 9 279 1.35e-12 70.1
MS.gene032862.t1 AT5G22700 23.445 418 263 9 10 421 34 400 1.71e-12 69.3
MS.gene032862.t1 AT1G48400 30.035 283 172 15 18 286 9 279 1.73e-12 69.7
MS.gene032862.t1 AT5G53640 28.042 189 123 4 18 204 21 198 2.45e-12 66.6
MS.gene032862.t1 AT5G38390 21.573 445 282 15 19 428 2 414 2.85e-12 68.9
MS.gene032862.t1 AT4G13960 23.799 437 287 15 19 428 2 419 3.05e-12 68.9
MS.gene032862.t1 AT4G13960 23.799 437 287 15 19 428 2 419 3.05e-12 68.9
MS.gene032862.t1 AT1G64540 27.273 352 189 16 18 337 4 320 3.18e-12 68.6
MS.gene032862.t1 AT1G64540 27.273 352 189 16 18 337 4 320 3.18e-12 68.6
MS.gene032862.t1 AT5G56690 22.611 429 274 12 21 424 4 399 3.19e-12 68.6
MS.gene032862.t1 AT5G60610 24.413 426 261 16 19 424 2 386 3.63e-12 68.2
MS.gene032862.t1 AT5G60610 24.413 426 261 16 19 424 2 386 3.63e-12 68.2
MS.gene032862.t1 AT1G05080 26.165 279 195 6 12 287 7 277 4.28e-12 68.2
MS.gene032862.t1 AT5G22660 27.796 313 198 8 18 317 12 309 5.72e-12 67.0
MS.gene032862.t1 AT1G16940 23.239 426 254 16 19 424 11 383 6.12e-12 67.8
MS.gene032862.t1 AT3G54160 27.476 313 191 14 74 368 38 332 1.14e-11 67.0
MS.gene032862.t1 AT5G54820 23.714 447 273 20 18 421 6 427 2.17e-11 66.2
MS.gene032862.t1 AT5G56800 24.286 280 184 8 168 440 74 332 5.65e-11 64.3
MS.gene032862.t1 AT5G56420 26.636 214 145 6 18 227 5 210 8.36e-11 64.3
MS.gene032862.t1 AT5G56420 26.636 214 145 6 18 227 5 210 8.36e-11 64.3
MS.gene032862.t1 AT5G56420 26.636 214 145 6 18 227 5 210 8.36e-11 64.3
MS.gene032862.t1 AT3G59000 24.645 211 127 6 19 200 2 209 9.59e-11 63.5
MS.gene032862.t1 AT5G03100 24.615 325 212 13 15 333 5 302 9.72e-11 63.2
MS.gene032862.t1 AT5G03100 24.615 325 212 13 15 333 5 302 9.72e-11 63.2

Find 83 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGAAAATGCCACAGTCTT+AGG 0.187503 5.4:+29724183 MS.gene032862:CDS
AATAAGTTGTGTTTAGAATT+TGG 0.196720 5.4:+29723161 MS.gene032862:CDS
TGACTTTGTATAAATTTATT+TGG 0.196914 5.4:+29723312 MS.gene032862:CDS
TTTCCACTTTGTAGCTAATA+TGG 0.218479 5.4:-29722841 None:intergenic
CTTTGGAGCTTATGTAAATT+TGG 0.253017 5.4:-29722717 None:intergenic
AACTTTACAGCTTCGATATC+AGG 0.268121 5.4:-29724156 None:intergenic
GGAATTATTATCAAAAGATT+TGG 0.275138 5.4:+29724227 MS.gene032862:CDS
CCTAGCAAATGTACGGTTTA+GGG 0.289425 5.4:-29723099 None:intergenic
TTGGGATGCTGAGAAATTAT+TGG 0.306887 5.4:-29723132 None:intergenic
AGCTAATTCTTTGTTATCTT+CGG 0.308106 5.4:+29723043 MS.gene032862:CDS
TATACAAAGTCAACTCTTGT+AGG 0.311346 5.4:-29723301 None:intergenic
AGATATAAAGTCTTCAAGTT+AGG 0.324587 5.4:-29723218 None:intergenic
AACACAACTTATTCAATGAT+TGG 0.333763 5.4:-29723151 None:intergenic
TTTCCACAAGACTCCTAATC+TGG 0.345074 5.4:+29723917 MS.gene032862:CDS
GTTCTTACAGTATCTTTAGT+AGG 0.349888 5.4:-29722816 None:intergenic
TATCGCCTATATCATGTCTT+TGG 0.358479 5.4:-29722734 None:intergenic
TTGATGCATGTATTGATCTT+AGG 0.359425 5.4:+29723525 MS.gene032862:CDS
ACCTAGCAAATGTACGGTTT+AGG 0.364496 5.4:-29723100 None:intergenic
ATCAATACATGCATCAACTA+TGG 0.366463 5.4:-29723519 None:intergenic
TAGAAAATGCCACAGTCTTA+GGG 0.390278 5.4:+29724184 MS.gene032862:CDS
AAGACATGATATAGGCGATA+TGG 0.399660 5.4:+29722737 MS.gene032862:CDS
TGTTCTGGCTTTGATACATC+CGG 0.413809 5.4:-29722912 None:intergenic
GGCGATGTGTCATTAAGTTT+CGG 0.417209 5.4:+29724295 MS.gene032862:CDS
ACACAACTTATTCAATGATT+GGG 0.417424 5.4:-29723150 None:intergenic
TTAGGGAAAATTTAAGATCA+AGG 0.420913 5.4:-29723082 None:intergenic
TGGAGAAGCTTGCTGATGTC+AGG 0.423605 5.4:+29724247 MS.gene032862:CDS
TGGGATGCTGAGAAATTATT+GGG 0.429808 5.4:-29723131 None:intergenic
ACGCATCTTGATGTGCCCTT+GGG 0.430661 5.4:+29723858 MS.gene032862:CDS
GACGCATCTTGATGTGCCCT+TGG 0.432063 5.4:+29723857 MS.gene032862:CDS
GGGCATCAAATTCATTTCCT+TGG 0.437785 5.4:+29724079 MS.gene032862:CDS
ATTGAGCTACTGAGTCGATT+AGG 0.446269 5.4:+29723593 MS.gene032862:CDS
ATGTGAAGAACTTCCAGATT+AGG 0.448255 5.4:-29723930 None:intergenic
GATATAAAGTCTTCAAGTTA+GGG 0.457943 5.4:-29723217 None:intergenic
AATATCAAATGATACTCTTC+AGG 0.464997 5.4:+29723634 MS.gene032862:CDS
TGTATTGATCTTAGGTGTTA+CGG 0.466447 5.4:+29723533 MS.gene032862:CDS
CTTATTCTTGGATGAAGGAT+GGG 0.472897 5.4:+29724059 MS.gene032862:CDS
AAGCTCCAAAGACATGATAT+AGG 0.476550 5.4:+29722729 MS.gene032862:CDS
GGAAAATTGCCTCATAGATC+AGG 0.481725 5.4:+29722941 MS.gene032862:CDS
TCTTATTCTTGGATGAAGGA+TGG 0.482853 5.4:+29724058 MS.gene032862:CDS
GGATGTATCAAAGCCAGAAC+AGG 0.485361 5.4:+29722914 MS.gene032862:CDS
TCAATTGCAACATTTATGCC+AGG 0.493294 5.4:+29724272 MS.gene032862:CDS
TTCTTACAGTATCTTTAGTA+GGG 0.494479 5.4:-29722815 None:intergenic
AAAGTCAACTCTTGTAGGAC+AGG 0.497729 5.4:-29723296 None:intergenic
CTGCGAATACGCAAATCACT+TGG 0.509908 5.4:-29723407 None:intergenic
GGAGATCAACATATTCTGTT+CGG 0.513569 5.4:+29724206 MS.gene032862:CDS
GGAAGTTCTTCACATTTCTA+CGG 0.521140 5.4:+29723938 MS.gene032862:CDS
AATGCCTGCTAATACTTCAC+TGG 0.524472 5.4:-29723895 None:intergenic
ATGTTGCAATTTCCACACTA+AGG 0.526054 5.4:+29723354 MS.gene032862:CDS
TTAGGGAAACGCATACCATC+AGG 0.528503 5.4:-29723200 None:intergenic
ATCAAAATGATTTAAGTCGA+TGG 0.528780 5.4:-29723384 None:intergenic
CCCTAAACCGTACATTTGCT+AGG 0.535231 5.4:+29723099 MS.gene032862:CDS
CTTCCAGATTAGGAGTCTTG+TGG 0.537229 5.4:-29723920 None:intergenic
CATGCATCAACTATGGAGGT+AGG 0.542206 5.4:-29723512 None:intergenic
GAATGCAAAGTCTTTCTACA+TGG 0.546122 5.4:-29722989 None:intergenic
ACTTAATGACACATCGCCCC+TGG 0.549850 5.4:-29724290 None:intergenic
ATATGAAGAAGAACAGCCTC+GGG 0.552463 5.4:-29722780 None:intergenic
CCCACCAGTGAAGTATTAGC+AGG 0.559620 5.4:+29723891 MS.gene032862:CDS
CTTCCATATTAGCTACAAAG+TGG 0.559991 5.4:+29722838 MS.gene032862:CDS
GCCTGCTAATACTTCACTGG+TGG 0.560009 5.4:-29723892 None:intergenic
CCTGCTAATACTTCACTGGT+GGG 0.561622 5.4:-29723891 None:intergenic
AATATGAAGAAGAACAGCCT+CGG 0.566198 5.4:-29722781 None:intergenic
CAATTGCAACATTTATGCCA+GGG 0.572664 5.4:+29724273 MS.gene032862:CDS
GTTTGTCTACCTGATCTATG+AGG 0.580776 5.4:-29722950 None:intergenic
CTACAAAGTGGAAATACTTG+TGG 0.581650 5.4:+29722850 MS.gene032862:CDS
ATGCATCAACTATGGAGGTA+GGG 0.584062 5.4:-29723511 None:intergenic
ACACAAACCTAGCAAATGTA+CGG 0.585691 5.4:-29723106 None:intergenic
CGCATCTTGATGTGCCCTTG+GGG 0.589045 5.4:+29723859 MS.gene032862:CDS
TTCACTCTATATATACCTGA+TGG 0.598388 5.4:+29723185 MS.gene032862:CDS
ATCAAAGCCAGAACAGGAGT+CGG 0.606211 5.4:+29722920 MS.gene032862:CDS
GTTGATCTCCCCTAAGACTG+TGG 0.625886 5.4:-29724193 None:intergenic
AATTGCAACATTTATGCCAG+GGG 0.632799 5.4:+29724274 MS.gene032862:CDS
AGAAACTTGAAAATCAAAGA+CGG 0.640999 5.4:-29722883 None:intergenic
AGATGCGTCAAATTGAAGAA+CGG 0.641774 5.4:-29723843 None:intergenic
AAGTCAACTCTTGTAGGACA+GGG 0.647735 5.4:-29723295 None:intergenic
GATGGTCAACTTCCTTAGTG+TGG 0.654929 5.4:-29723366 None:intergenic
AATACATGCATCAACTATGG+AGG 0.659926 5.4:-29723516 None:intergenic
AAAATGAGAAGTCAGCTCAA+CGG 0.661026 5.4:+29723258 MS.gene032862:CDS
TGCGTCAAATTGAAGAACGG+AGG 0.663918 5.4:-29723840 None:intergenic
CTATGGAGGTAGGGTTAACG+AGG 0.666420 5.4:-29723502 None:intergenic
AGAGAAGACGTGAAACACCA+AGG 0.690184 5.4:-29724096 None:intergenic
AGAAAATGCCACAGTCTTAG+GGG 0.697274 5.4:+29724185 MS.gene032862:CDS
TATGATTAGTGAATTACCCG+AGG 0.699428 5.4:+29722764 MS.gene032862:CDS
CTGCTAATACTTCACTGGTG+GGG 0.701325 5.4:-29723890 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGACTTTGTATAAATTTATT+TGG + chr5.4:29723312-29723331 MS.gene032862:CDS 15.0%
!! AATACATAAAGAATATGCAA+TGG - chr5.4:29723750-29723769 None:intergenic 20.0%
!! GGAATTATTATCAAAAGATT+TGG + chr5.4:29724227-29724246 MS.gene032862:CDS 20.0%
!!! AATAAGTTGTGTTTAGAATT+TGG + chr5.4:29723161-29723180 MS.gene032862:CDS 20.0%
!!! GACAAATTTTATAATTGGAT+GGG - chr5.4:29723483-29723502 None:intergenic 20.0%
! AACACAACTTATTCAATGAT+TGG - chr5.4:29723154-29723173 None:intergenic 25.0%
! AATATCAAATGATACTCTTC+AGG + chr5.4:29723634-29723653 MS.gene032862:CDS 25.0%
! AATTTATTGACAATGTTGCT+TGG + chr5.4:29723709-29723728 MS.gene032862:intron 25.0%
! ACACAACTTATTCAATGATT+GGG - chr5.4:29723153-29723172 None:intergenic 25.0%
! AGAAACTTGAAAATCAAAGA+CGG - chr5.4:29722886-29722905 None:intergenic 25.0%
! ATCAAAATGATTTAAGTCGA+TGG - chr5.4:29723387-29723406 None:intergenic 25.0%
! TTCTTACAGTATCTTTAGTA+GGG - chr5.4:29722818-29722837 None:intergenic 25.0%
!! ACGAGGACAAATTTTATAAT+TGG - chr5.4:29723488-29723507 None:intergenic 25.0%
!! AGATATAAAGTCTTCAAGTT+AGG - chr5.4:29723221-29723240 None:intergenic 25.0%
!! AGCTAATTCTTTGTTATCTT+CGG + chr5.4:29723043-29723062 MS.gene032862:CDS 25.0%
!! ATTTATTGACAATGTTGCTT+GGG + chr5.4:29723710-29723729 MS.gene032862:intron 25.0%
!! GATATAAAGTCTTCAAGTTA+GGG - chr5.4:29723220-29723239 None:intergenic 25.0%
!! GGACAAATTTTATAATTGGA+TGG - chr5.4:29723484-29723503 None:intergenic 25.0%
!! TGTTCTATTTCAGATTTTCT+TGG + chr5.4:29724126-29724145 MS.gene032862:CDS 25.0%
!! TTAGGGAAAATTTAAGATCA+AGG - chr5.4:29723085-29723104 None:intergenic 25.0%
!! TTTTTCTTATTCTTGGATGA+AGG + chr5.4:29724054-29724073 MS.gene032862:CDS 25.0%
!!! AGTATTTTGCTGTTGATTTT+GGG - chr5.4:29723561-29723580 None:intergenic 25.0%
!!! TAGTATTTTGCTGTTGATTT+TGG - chr5.4:29723562-29723581 None:intergenic 25.0%
!!! TGTTTATTGATTCTTGTGTA+GGG + chr5.4:29724030-29724049 MS.gene032862:intron 25.0%
!!! TTGTTTATTGATTCTTGTGT+AGG + chr5.4:29724029-29724048 MS.gene032862:intron 25.0%
!!! TTTTCAAGTTTCTTGTAATC+CGG + chr5.4:29722893-29722912 MS.gene032862:CDS 25.0%
ATCAATACATGCATCAACTA+TGG - chr5.4:29723522-29723541 None:intergenic 30.0%
CATAGTTAAGACACTAGTAA+GGG - chr5.4:29723797-29723816 None:intergenic 30.0%
GTACAAAAAGCTGATATTGA+TGG + chr5.4:29723014-29723033 MS.gene032862:CDS 30.0%
GTTCTTACAGTATCTTTAGT+AGG - chr5.4:29722819-29722838 None:intergenic 30.0%
TATACAAAGTCAACTCTTGT+AGG - chr5.4:29723304-29723323 None:intergenic 30.0%
TTCACTCTATATATACCTGA+TGG + chr5.4:29723185-29723204 MS.gene032862:CDS 30.0%
TTTCCACTTTGTAGCTAATA+TGG - chr5.4:29722844-29722863 None:intergenic 30.0%
! GTAGGGATTTTTCTTATTCT+TGG + chr5.4:29724047-29724066 MS.gene032862:intron 30.0%
! TCTTTTATCTTTAAGCTACG+CGG + chr5.4:29723457-29723476 MS.gene032862:CDS 30.0%
! TGTATTGATCTTAGGTGTTA+CGG + chr5.4:29723533-29723552 MS.gene032862:CDS 30.0%
! TTGATGCATGTATTGATCTT+AGG + chr5.4:29723525-29723544 MS.gene032862:CDS 30.0%
!! CTTTGGAGCTTATGTAAATT+TGG - chr5.4:29722720-29722739 None:intergenic 30.0%
!!! GTATTTTGCTGTTGATTTTG+GGG - chr5.4:29723560-29723579 None:intergenic 30.0%
AAAATGAGAAGTCAGCTCAA+CGG + chr5.4:29723258-29723277 MS.gene032862:CDS 35.0%
AACTTTACAGCTTCGATATC+AGG - chr5.4:29724159-29724178 None:intergenic 35.0%
AAGACATGATATAGGCGATA+TGG + chr5.4:29722737-29722756 MS.gene032862:CDS 35.0%
AAGCTCCAAAGACATGATAT+AGG + chr5.4:29722729-29722748 MS.gene032862:CDS 35.0%
AATACATGCATCAACTATGG+AGG - chr5.4:29723519-29723538 None:intergenic 35.0%
AATATGAAGAAGAACAGCCT+CGG - chr5.4:29722784-29722803 None:intergenic 35.0%
AATTGCAACATTTATGCCAG+GGG + chr5.4:29724274-29724293 MS.gene032862:CDS 35.0%
ACACAAACCTAGCAAATGTA+CGG - chr5.4:29723109-29723128 None:intergenic 35.0%
AGATGCGTCAAATTGAAGAA+CGG - chr5.4:29723846-29723865 None:intergenic 35.0%
ATGTGAAGAACTTCCAGATT+AGG - chr5.4:29723933-29723952 None:intergenic 35.0%
ATGTTGCAATTTCCACACTA+AGG + chr5.4:29723354-29723373 MS.gene032862:CDS 35.0%
CAATTGCAACATTTATGCCA+GGG + chr5.4:29724273-29724292 MS.gene032862:CDS 35.0%
CTACAAAGTGGAAATACTTG+TGG + chr5.4:29722850-29722869 MS.gene032862:CDS 35.0%
CTTATTCTTGGATGAAGGAT+GGG + chr5.4:29724059-29724078 MS.gene032862:CDS 35.0%
CTTCCATATTAGCTACAAAG+TGG + chr5.4:29722838-29722857 MS.gene032862:CDS 35.0%
GAATGCAAAGTCTTTCTACA+TGG - chr5.4:29722992-29723011 None:intergenic 35.0%
GCATAGTTAAGACACTAGTA+AGG - chr5.4:29723798-29723817 None:intergenic 35.0%
GGAAGTTCTTCACATTTCTA+CGG + chr5.4:29723938-29723957 MS.gene032862:CDS 35.0%
GGAGATCAACATATTCTGTT+CGG + chr5.4:29724206-29724225 MS.gene032862:CDS 35.0%
TAGAAAATGCCACAGTCTTA+GGG + chr5.4:29724184-29724203 MS.gene032862:CDS 35.0%
TATCGCCTATATCATGTCTT+TGG - chr5.4:29722737-29722756 None:intergenic 35.0%
TATGATTAGTGAATTACCCG+AGG + chr5.4:29722764-29722783 MS.gene032862:CDS 35.0%
TCAATTGCAACATTTATGCC+AGG + chr5.4:29724272-29724291 MS.gene032862:CDS 35.0%
TCTTATTCTTGGATGAAGGA+TGG + chr5.4:29724058-29724077 MS.gene032862:CDS 35.0%
TGGGATGCTGAGAAATTATT+GGG - chr5.4:29723134-29723153 None:intergenic 35.0%
TTACTATTAGCCGTGAAACA+TGG - chr5.4:29723989-29724008 None:intergenic 35.0%
TTAGAAAATGCCACAGTCTT+AGG + chr5.4:29724183-29724202 MS.gene032862:CDS 35.0%
TTGGGATGCTGAGAAATTAT+TGG - chr5.4:29723135-29723154 None:intergenic 35.0%
AAAGTCAACTCTTGTAGGAC+AGG - chr5.4:29723299-29723318 None:intergenic 40.0%
AAGTCAACTCTTGTAGGACA+GGG - chr5.4:29723298-29723317 None:intergenic 40.0%
AATGCCTGCTAATACTTCAC+TGG - chr5.4:29723898-29723917 None:intergenic 40.0%
ACCTAGCAAATGTACGGTTT+AGG - chr5.4:29723103-29723122 None:intergenic 40.0%
AGAAAATGCCACAGTCTTAG+GGG + chr5.4:29724185-29724204 MS.gene032862:CDS 40.0%
ATATGAAGAAGAACAGCCTC+GGG - chr5.4:29722783-29722802 None:intergenic 40.0%
ATGCATCAACTATGGAGGTA+GGG - chr5.4:29723514-29723533 None:intergenic 40.0%
ATTGAGCTACTGAGTCGATT+AGG + chr5.4:29723593-29723612 MS.gene032862:CDS 40.0%
CCTAGCAAATGTACGGTTTA+GGG - chr5.4:29723102-29723121 None:intergenic 40.0%
GCTTCTTCAACCATGTTTCA+CGG + chr5.4:29723976-29723995 MS.gene032862:intron 40.0%
GGAAAATTGCCTCATAGATC+AGG + chr5.4:29722941-29722960 MS.gene032862:CDS 40.0%
GGGCATCAAATTCATTTCCT+TGG + chr5.4:29724079-29724098 MS.gene032862:CDS 40.0%
GTTTGTCTACCTGATCTATG+AGG - chr5.4:29722953-29722972 None:intergenic 40.0%
TTTCCACAAGACTCCTAATC+TGG + chr5.4:29723917-29723936 MS.gene032862:CDS 40.0%
! GGCGATGTGTCATTAAGTTT+CGG + chr5.4:29724295-29724314 MS.gene032862:CDS 40.0%
!! AGCTGACTTCTCATTTTCGA+AGG - chr5.4:29723255-29723274 None:intergenic 40.0%
!! TGTTCTGGCTTTGATACATC+CGG - chr5.4:29722915-29722934 None:intergenic 40.0%
AGAGAAGACGTGAAACACCA+AGG - chr5.4:29724099-29724118 None:intergenic 45.0%
ATCAAAGCCAGAACAGGAGT+CGG + chr5.4:29722920-29722939 MS.gene032862:CDS 45.0%
CATGCATCAACTATGGAGGT+AGG - chr5.4:29723515-29723534 None:intergenic 45.0%
CCCTAAACCGTACATTTGCT+AGG + chr5.4:29723099-29723118 MS.gene032862:CDS 45.0%
CCTGCTAATACTTCACTGGT+GGG - chr5.4:29723894-29723913 None:intergenic 45.0%
CTGCGAATACGCAAATCACT+TGG - chr5.4:29723410-29723429 None:intergenic 45.0%
CTGCTAATACTTCACTGGTG+GGG - chr5.4:29723893-29723912 None:intergenic 45.0%
CTTCCAGATTAGGAGTCTTG+TGG - chr5.4:29723923-29723942 None:intergenic 45.0%
GATGGTCAACTTCCTTAGTG+TGG - chr5.4:29723369-29723388 None:intergenic 45.0%
GGATGTATCAAAGCCAGAAC+AGG + chr5.4:29722914-29722933 MS.gene032862:CDS 45.0%
GTGGGGTAAAAATACCCCAA+GGG - chr5.4:29723876-29723895 None:intergenic 45.0%
TGCGTCAAATTGAAGAACGG+AGG - chr5.4:29723843-29723862 None:intergenic 45.0%
TTAGGGAAACGCATACCATC+AGG - chr5.4:29723203-29723222 None:intergenic 45.0%
! CAATTTTCCGACTCCTGTTC+TGG - chr5.4:29722930-29722949 None:intergenic 45.0%
ACGCATCTTGATGTGCCCTT+GGG + chr5.4:29723858-29723877 MS.gene032862:CDS 50.0%
ACTTAATGACACATCGCCCC+TGG - chr5.4:29724293-29724312 None:intergenic 50.0%
CTATGGAGGTAGGGTTAACG+AGG - chr5.4:29723505-29723524 None:intergenic 50.0%
GCCTGCTAATACTTCACTGG+TGG - chr5.4:29723895-29723914 None:intergenic 50.0%
GGTGGGGTAAAAATACCCCA+AGG - chr5.4:29723877-29723896 None:intergenic 50.0%
GTTGATCTCCCCTAAGACTG+TGG - chr5.4:29724196-29724215 None:intergenic 50.0%
! CAGCTCAACGGCTTTTGTCT+GGG + chr5.4:29723270-29723289 MS.gene032862:CDS 50.0%
! CCCACCAGTGAAGTATTAGC+AGG + chr5.4:29723891-29723910 MS.gene032862:CDS 50.0%
! TCAGCTCAACGGCTTTTGTC+TGG + chr5.4:29723269-29723288 MS.gene032862:CDS 50.0%
!! TGGAGAAGCTTGCTGATGTC+AGG + chr5.4:29724247-29724266 MS.gene032862:CDS 50.0%
CGCATCTTGATGTGCCCTTG+GGG + chr5.4:29723859-29723878 MS.gene032862:CDS 55.0%
GACGCATCTTGATGTGCCCT+TGG + chr5.4:29723857-29723876 MS.gene032862:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 29722708 29724320 29722708 ID=MS.gene032862
chr5.4 mRNA 29722708 29724320 29722708 ID=MS.gene032862.t1;Parent=MS.gene032862
chr5.4 exon 29722708 29723655 29722708 ID=MS.gene032862.t1.exon1;Parent=MS.gene032862.t1
chr5.4 CDS 29722708 29723655 29722708 ID=cds.MS.gene032862.t1;Parent=MS.gene032862.t1
chr5.4 exon 29723804 29723959 29723804 ID=MS.gene032862.t1.exon2;Parent=MS.gene032862.t1
chr5.4 CDS 29723804 29723959 29723804 ID=cds.MS.gene032862.t1;Parent=MS.gene032862.t1
chr5.4 exon 29724051 29724320 29724051 ID=MS.gene032862.t1.exon3;Parent=MS.gene032862.t1
chr5.4 CDS 29724051 29724320 29724051 ID=cds.MS.gene032862.t1;Parent=MS.gene032862.t1
Gene Sequence

>MS.gene032862

ATGTCATCACCAAATTTACATAAGCTCCAAAGACATGATATAGGCGATATGGAAGATATGATTAGTGAATTACCCGAGGCTGTTCTTCTTCATATTCTTTCTTTACTCCCTACTAAAGATACTGTAAGAACTTCCATATTAGCTACAAAGTGGAAATACTTGTGGACACACTTATCCGTCTTTGATTTTCAAGTTTCTTGTAATCCGGATGTATCAAAGCCAGAACAGGAGTCGGAAAATTGCCTCATAGATCAGGTAGACAAACTACTTCACACATCTGACCATGTAGAAAGACTTTGCATTCAAGTACAAAAAGCTGATATTGATGGAGAAAAAGCTAATTCTTTGTTATCTTCGGCATTGATGCACAAACTCCTTGATCTTAAATTTTCCCTAAACCGTACATTTGCTAGGTTTGTGTTACCCAATAATTTCTCAGCATCCCAATCATTGAATAAGTTGTGTTTAGAATTTGGTTTCACTCTATATATACCTGATGGTATGCGTTTCCCTAACTTGAAGACTTTATATCTTTCACATCTTTCCTTCGAAAATGAGAAGTCAGCTCAACGGCTTTTGTCTGGGTGCCCTGTCCTACAAGAGTTGACTTTGTATAAATTTATTTGGTTGAACATAGAACAGATCAATGTTGCAATTTCCACACTAAGGAAGTTGACCATCGACTTAAATCATTTTGATCCAAGTGATTTGCGTATTCGCAGTTTTACAATCAAATTTGATGTTGCGAATCTTTTATCTTTAAGCTACGCGGCCCATCCAATTATAAAATTTGTCCTCGTTAACCCTACCTCCATAGTTGATGCATGTATTGATCTTAGGTGTTACGGTCCCCAAAATCAACAGCAAAATACTACGCAATTTGCAATTGAGCTACTGAGTCGATTAGGTAGTGTCAAATCTCTCACAATATCAAATGATACTCTTCAGGTATGTTTTACTGCTCACTTATGATCTTCATTTTTCTAAATGTTGTATAAGATAATTTATTGACAATGTTGCTTGGGTTATGTGCTTGTTTCCATTGCATATTCTTTATGTATTACAATGATGTATCTGTTTTTGTTTCCCTTACTAGTGTCTTAACTATGCAAAAGACACTCTTCATCTTTTGCCTCCGTTCTTCAATTTGACGCATCTTGATGTGCCCTTGGGGTATTTTTACCCCACCAGTGAAGTATTAGCAGGCATTTTCCACAAGACTCCTAATCTGGAAGTTCTTCACATTTCTACGGTACATCACGTATCTTGCTTCTTCAACCATGTTTCACGGCTAATAGTAAAATTATTTCTGTTCATTGACTTGTTTATTGATTCTTGTGTAGGGATTTTTCTTATTCTTGGATGAAGGATGGGCATCAAATTCATTTCCTTGGTGTTTCACGTCTTCTCTCAAAGAATGTTCTATTTCAGATTTTCTTGGAATTGAACCTGATATCGAAGCTGTAAAGTTTTTGTTAGAAAATGCCACAGTCTTAGGGGAGATCAACATATTCTGTTCGGAATTATTATCAAAAGATTTGGAGAAGCTTGCTGATGTCAGGAATCAATTGCAACATTTATGCCAGGGGCGATGTGTCATTAAGTTTCGGTAA

Protein sequence

>MS.gene032862.t1

MSSPNLHKLQRHDIGDMEDMISELPEAVLLHILSLLPTKDTVRTSILATKWKYLWTHLSVFDFQVSCNPDVSKPEQESENCLIDQVDKLLHTSDHVERLCIQVQKADIDGEKANSLLSSALMHKLLDLKFSLNRTFARFVLPNNFSASQSLNKLCLEFGFTLYIPDGMRFPNLKTLYLSHLSFENEKSAQRLLSGCPVLQELTLYKFIWLNIEQINVAISTLRKLTIDLNHFDPSDLRIRSFTIKFDVANLLSLSYAAHPIIKFVLVNPTSIVDACIDLRCYGPQNQQQNTTQFAIELLSRLGSVKSLTISNDTLQCLNYAKDTLHLLPPFFNLTHLDVPLGYFYPTSEVLAGIFHKTPNLEVLHISTGFFLFLDEGWASNSFPWCFTSSLKECSISDFLGIEPDIEAVKFLLENATVLGEINIFCSELLSKDLEKLADVRNQLQHLCQGRCVIKFR