AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94460


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94460.t1 MTR_5g039970 93.168 322 22 0 1 322 1 322 0.0 566
MS.gene94460.t1 MTR_4g080590 54.657 408 174 6 1 407 5 402 8.14e-132 395
MS.gene94460.t1 MTR_4g080590 54.372 366 157 4 1 366 5 360 3.37e-117 354
MS.gene94460.t1 MTR_4g080773 51.435 418 184 7 3 407 6 417 6.57e-113 348
MS.gene94460.t1 MTR_4g080773 51.435 418 184 7 3 407 6 417 9.98e-113 347
MS.gene94460.t1 MTR_4g080787 50.718 418 184 8 3 407 6 414 1.88e-111 344
MS.gene94460.t1 MTR_4g130200 50.000 422 140 7 9 428 10 362 1.94e-111 340
MS.gene94460.t1 MTR_7g023310 49.640 417 189 9 1 407 5 410 1.57e-102 319
MS.gene94460.t1 MTR_5g039950 46.359 412 170 8 1 407 5 370 4.83e-94 296
MS.gene94460.t1 MTR_3g048290 46.265 415 199 6 1 401 5 409 9.93e-94 297
MS.gene94460.t1 MTR_7g039630 43.603 383 162 6 1 372 5 344 5.14e-83 265
MS.gene94460.t1 MTR_7g023330 40.049 412 176 11 2 407 3 349 4.27e-70 233
MS.gene94460.t1 MTR_2g094750 44.149 376 176 10 17 364 88 457 4.63e-69 233
MS.gene94460.t1 MTR_4g081030 40.710 366 192 8 9 366 7 355 2.27e-61 209
MS.gene94460.t1 MTR_4g080807 40.125 319 153 4 90 407 1 282 1.31e-52 186
MS.gene94460.t1 MTR_4g080813 70.769 65 19 0 1 65 1 65 1.11e-25 101
MS.gene94460.t1 MTR_4g032845 27.696 408 264 13 17 409 1 392 7.58e-23 102
MS.gene94460.t1 MTR_5g005690 25.446 448 289 9 5 415 3 442 3.01e-21 97.8
MS.gene94460.t1 MTR_2g072730 27.861 402 258 16 18 403 15 400 8.02e-21 96.3
MS.gene94460.t1 MTR_1g082260 37.500 144 87 2 82 222 32 175 8.55e-20 87.8
MS.gene94460.t1 MTR_2g094450 37.234 188 91 6 195 376 31 197 5.94e-18 83.2
MS.gene94460.t1 MTR_2g072530 24.757 412 285 10 1 406 1 393 1.48e-17 86.3
MS.gene94460.t1 MTR_6g018660 28.804 368 206 12 1 339 1 341 1.60e-17 85.5
MS.gene94460.t1 MTR_2g072720 27.033 418 275 15 7 412 31 430 3.48e-17 85.1
MS.gene94460.t1 MTR_2g082800 25.127 394 261 14 7 392 14 381 8.55e-17 83.6
MS.gene94460.t1 MTR_8g467800 27.568 370 226 16 10 364 11 353 1.41e-16 83.2
MS.gene94460.t1 MTR_8g445780 26.485 404 266 14 11 406 6 386 3.50e-16 81.3
MS.gene94460.t1 MTR_8g062270 28.333 360 231 10 16 364 13 356 5.12e-16 81.3
MS.gene94460.t1 MTR_8g467800 27.329 322 196 12 10 316 11 309 4.86e-15 77.4
MS.gene94460.t1 MTR_5g080710 25.383 457 287 16 19 461 33 449 1.05e-14 77.4
MS.gene94460.t1 MTR_3g023470 27.011 348 198 11 18 341 14 329 1.60e-14 76.3
MS.gene94460.t1 MTR_3g108560 28.796 191 121 3 14 202 15 192 2.63e-14 74.7
MS.gene94460.t1 MTR_3g036320 27.052 329 208 11 21 337 22 330 3.37e-14 75.1
MS.gene94460.t1 MTR_2g007450 23.349 424 236 14 19 412 16 380 3.50e-14 75.5
MS.gene94460.t1 MTR_3g108560 28.796 191 121 3 14 202 15 192 4.92e-14 74.7
MS.gene94460.t1 MTR_8g058965 26.179 424 266 16 15 412 9 411 6.63e-14 74.7
MS.gene94460.t1 MTR_8g014160 32.500 200 116 8 18 202 40 235 1.42e-13 73.6
MS.gene94460.t1 MTR_2g082850 25.348 359 238 15 18 362 21 363 1.51e-13 73.2
MS.gene94460.t1 MTR_7g056447 31.720 186 116 5 18 200 8 185 1.68e-13 72.0
MS.gene94460.t1 MTR_3g036250 28.796 191 121 6 19 202 5 187 4.68e-13 71.6
MS.gene94460.t1 MTR_4g050250 26.110 383 246 15 10 368 12 381 1.15e-12 70.9
MS.gene94460.t1 MTR_4g056020 28.613 346 200 16 16 342 6 323 1.24e-12 70.9
MS.gene94460.t1 MTR_8g062080 24.821 419 249 18 19 412 23 400 1.26e-12 70.9
MS.gene94460.t1 MTR_1g011410 26.546 388 221 13 2 366 287 633 1.33e-12 71.2
MS.gene94460.t1 MTR_1g011410 28.372 215 127 4 14 227 2 190 2.27e-11 67.4
MS.gene94460.t1 MTR_7g098570 30.631 222 118 9 1 206 2 203 1.49e-12 70.9
MS.gene94460.t1 MTR_1g115245 26.357 258 162 10 10 256 17 257 1.58e-12 69.3
MS.gene94460.t1 MTR_3g105060 26.316 190 136 2 19 208 14 199 1.89e-12 69.7
MS.gene94460.t1 MTR_1g115250 25.245 408 267 13 7 406 20 397 2.04e-12 70.1
MS.gene94460.t1 MTR_7g084080 28.102 274 171 9 18 279 16 275 2.30e-12 68.6
MS.gene94460.t1 MTR_3g023270 24.620 329 218 9 18 339 11 316 2.62e-12 68.9
MS.gene94460.t1 MTR_3g108150 31.250 192 110 5 18 202 12 188 4.80e-12 68.6
MS.gene94460.t1 MTR_4g090940 26.590 346 204 12 18 341 158 475 5.33e-12 69.3
MS.gene94460.t1 MTR_7g098480 28.436 211 128 8 1 202 1 197 5.98e-12 68.9
MS.gene94460.t1 MTR_0492s0020 30.811 185 117 5 18 202 85 258 6.20e-12 68.6
MS.gene94460.t1 MTR_0543s0010 30.811 185 117 5 18 202 85 258 6.71e-12 68.6
MS.gene94460.t1 MTR_7g056433 32.124 193 122 5 16 204 9 196 7.24e-12 68.2
MS.gene94460.t1 MTR_4g045900 23.604 394 240 12 19 366 26 404 1.07e-11 68.2
MS.gene94460.t1 MTR_3g023630 27.358 212 147 4 19 227 8 215 1.39e-11 67.0
MS.gene94460.t1 MTR_5g021550 39.535 86 50 1 18 101 18 103 2.79e-11 62.8
MS.gene94460.t1 MTR_7g080440 24.490 343 198 11 10 325 6 314 3.31e-11 65.9
MS.gene94460.t1 MTR_0049s0110 24.438 356 228 10 19 371 8 325 3.63e-11 65.5
MS.gene94460.t1 MTR_3g019240 26.453 344 216 15 18 346 25 346 4.17e-11 65.9
MS.gene94460.t1 MTR_2g007400 24.079 407 212 11 19 399 12 347 5.57e-11 65.5
MS.gene94460.t1 MTR_3g023440 26.646 319 203 10 17 325 1 298 6.61e-11 65.1
MS.gene94460.t1 MTR_5g084070 25.000 472 303 15 10 471 4 434 7.15e-11 65.1
MS.gene94460.t1 MTR_4g050940 26.957 345 205 13 19 343 67 384 8.33e-11 65.5
MS.gene94460.t1 MTR_0049s0110 28.947 190 130 5 19 207 8 193 9.20e-11 63.5
MS.gene94460.t1 MTR_4g104300 27.500 240 154 7 14 243 108 337 9.28e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94460.t1 AT4G14096 31.165 369 212 14 13 364 2 345 5.78e-33 132
MS.gene94460.t1 AT4G14096 31.165 369 212 14 13 364 2 345 5.78e-33 132
MS.gene94460.t1 AT4G14103 30.933 375 212 14 13 364 2 352 1.96e-32 129
MS.gene94460.t1 AT4G14103 30.933 375 212 14 13 364 2 352 1.96e-32 129
MS.gene94460.t1 AT4G14103 30.585 376 212 15 13 364 2 352 7.36e-32 129
MS.gene94460.t1 AT3G59210 30.814 344 199 12 18 339 6 332 7.89e-29 120
MS.gene94460.t1 AT3G59210 30.814 344 199 12 18 339 6 332 7.89e-29 120
MS.gene94460.t1 AT3G59210 30.814 344 199 12 18 339 6 332 7.89e-29 120
MS.gene94460.t1 AT3G59210 30.814 344 199 12 18 339 6 332 7.89e-29 120
MS.gene94460.t1 AT3G59210 30.814 344 199 12 18 339 6 332 7.89e-29 120
MS.gene94460.t1 AT3G59200 28.191 376 219 13 19 364 7 361 1.40e-27 115
MS.gene94460.t1 AT3G59200 28.191 376 219 13 19 364 7 361 7.15e-26 112
MS.gene94460.t1 AT1G58310 27.845 413 240 15 13 385 2 396 8.51e-25 108
MS.gene94460.t1 AT3G59240 28.809 361 226 12 18 364 7 350 7.22e-24 106
MS.gene94460.t1 AT1G16930 25.648 386 254 13 19 392 15 379 3.46e-23 103
MS.gene94460.t1 AT1G16930 25.648 386 254 13 19 392 15 379 3.46e-23 103
MS.gene94460.t1 AT1G16930 25.648 386 254 13 19 392 15 379 3.46e-23 103
MS.gene94460.t1 AT3G59230 27.247 356 223 11 10 339 4 349 4.31e-23 103
MS.gene94460.t1 AT1G66290 26.735 389 259 12 15 396 25 394 4.50e-23 103
MS.gene94460.t1 AT4G22280 29.494 356 216 11 19 366 2 330 1.63e-22 99.8
MS.gene94460.t1 AT4G00320 29.143 350 209 13 19 342 13 349 1.96e-22 101
MS.gene94460.t1 AT3G59250 28.846 364 197 13 13 364 2 315 2.43e-22 100
MS.gene94460.t1 AT5G41840 26.110 383 242 13 14 364 9 382 2.78e-22 101
MS.gene94460.t1 AT3G59190 26.496 351 226 12 10 339 4 343 5.43e-22 99.0
MS.gene94460.t1 AT4G22280 29.494 356 216 11 19 366 2 330 7.69e-22 99.0
MS.gene94460.t1 AT3G26922 28.571 224 151 2 6 227 1 217 9.03e-22 97.1
MS.gene94460.t1 AT3G26922 28.571 224 151 2 6 227 1 217 9.03e-22 97.1
MS.gene94460.t1 AT3G59190 26.211 351 227 11 10 339 4 343 1.20e-21 99.4
MS.gene94460.t1 AT5G22730 26.794 418 259 14 18 411 27 421 2.10e-21 98.2
MS.gene94460.t1 AT5G22730 26.794 418 259 14 18 411 27 421 2.10e-21 98.2
MS.gene94460.t1 AT3G58860 28.135 327 213 11 19 339 7 317 2.19e-21 98.2
MS.gene94460.t1 AT4G13965 29.245 212 137 4 19 227 10 211 3.62e-21 97.1
MS.gene94460.t1 AT3G58880 30.149 335 208 12 17 337 1 323 7.45e-21 96.3
MS.gene94460.t1 AT1G78750 26.972 393 259 13 19 396 18 397 8.79e-21 96.3
MS.gene94460.t1 AT1G78750 26.972 393 259 13 19 396 18 397 8.79e-21 96.3
MS.gene94460.t1 AT3G59160 28.954 373 210 15 10 339 5 365 2.80e-20 94.7
MS.gene94460.t1 AT5G41830 27.920 351 214 12 18 342 12 349 2.92e-20 95.1
MS.gene94460.t1 AT1G13780 25.679 405 253 15 19 396 10 393 4.85e-20 94.0
MS.gene94460.t1 AT5G38590 27.340 406 247 11 19 412 2 371 1.82e-19 91.7
MS.gene94460.t1 AT2G04230 31.982 222 131 5 18 228 12 224 2.03e-19 92.0
MS.gene94460.t1 AT1G66300 24.242 363 249 10 19 371 29 375 2.34e-19 91.7
MS.gene94460.t1 AT4G09920 27.619 315 194 8 19 325 2 290 3.20e-19 89.0
MS.gene94460.t1 AT4G09920 27.619 315 194 8 19 325 2 290 3.20e-19 89.0
MS.gene94460.t1 AT4G09920 27.619 315 194 8 19 325 2 290 3.20e-19 89.0
MS.gene94460.t1 AT1G69630 25.849 383 236 16 11 371 10 366 4.14e-19 90.9
MS.gene94460.t1 AT3G59170 28.463 397 218 16 18 364 6 386 4.42e-19 91.3
MS.gene94460.t1 AT1G56610 28.533 375 231 11 21 375 12 369 9.16e-19 90.1
MS.gene94460.t1 AT4G10400 26.161 409 243 14 19 412 2 366 1.26e-18 89.0
MS.gene94460.t1 AT4G10400 26.161 409 243 14 19 412 2 366 1.26e-18 89.0
MS.gene94460.t1 AT4G10400 26.161 409 243 14 19 412 2 366 1.26e-18 89.0
MS.gene94460.t1 AT5G27750 25.562 356 229 12 19 347 5 351 1.61e-18 88.2
MS.gene94460.t1 AT5G25860 26.110 383 242 15 18 377 11 375 1.68e-18 89.0
MS.gene94460.t1 AT3G50710 28.169 355 219 10 19 366 2 327 1.71e-18 89.0
MS.gene94460.t1 AT1G56610 28.533 375 231 11 21 375 75 432 2.05e-18 89.4
MS.gene94460.t1 AT4G00315 30.973 226 138 7 19 233 2 220 2.28e-18 88.6
MS.gene94460.t1 AT1G55030 29.167 216 139 3 15 227 5 209 2.49e-18 88.2
MS.gene94460.t1 AT1G55030 29.167 216 139 3 15 227 15 219 2.66e-18 88.2
MS.gene94460.t1 AT5G27750 25.562 356 229 12 19 347 5 351 3.59e-18 88.2
MS.gene94460.t1 AT4G09920 28.013 307 180 8 19 313 2 279 4.40e-18 86.3
MS.gene94460.t1 AT4G09920 28.013 307 180 8 19 313 2 279 4.40e-18 86.3
MS.gene94460.t1 AT4G27050 27.540 374 223 17 19 366 4 355 4.69e-18 87.8
MS.gene94460.t1 AT4G27050 27.540 374 223 17 19 366 4 355 4.69e-18 87.8
MS.gene94460.t1 AT4G27050 27.540 374 223 17 19 366 4 355 4.69e-18 87.8
MS.gene94460.t1 AT4G27050 27.540 374 223 17 19 366 4 355 4.69e-18 87.8
MS.gene94460.t1 AT4G27050 27.540 374 223 17 19 366 4 355 4.69e-18 87.8
MS.gene94460.t1 AT3G58920 26.804 388 234 14 19 373 2 372 4.82e-18 87.8
MS.gene94460.t1 AT1G78730 25.275 364 220 13 19 369 22 346 7.72e-18 86.7
MS.gene94460.t1 AT5G56810 31.034 232 127 8 11 226 5 219 1.09e-17 84.7
MS.gene94460.t1 AT5G53840 27.295 403 260 13 15 409 14 391 1.39e-17 86.3
MS.gene94460.t1 AT2G42730 26.347 334 222 10 16 335 2 325 1.43e-17 86.3
MS.gene94460.t1 AT3G03030 26.630 368 239 14 19 364 2 360 1.82e-17 86.3
MS.gene94460.t1 AT3G58960 27.248 367 231 14 19 366 2 351 2.39e-17 85.9
MS.gene94460.t1 AT5G38590 28.136 295 186 6 19 310 2 273 2.57e-17 83.2
MS.gene94460.t1 AT1G55660 28.512 242 157 7 14 246 48 282 2.60e-17 84.7
MS.gene94460.t1 AT2G29910 25.513 341 214 11 19 339 5 325 2.76e-17 84.0
MS.gene94460.t1 AT2G29910 25.513 341 214 11 19 339 5 325 2.76e-17 84.0
MS.gene94460.t1 AT3G58980 25.829 422 264 16 19 412 2 402 3.25e-17 85.9
MS.gene94460.t1 AT2G29910 25.575 348 210 12 18 337 4 330 3.43e-17 84.0
MS.gene94460.t1 AT2G29910 25.575 348 210 12 18 337 4 330 3.43e-17 84.0
MS.gene94460.t1 AT2G29910 25.575 348 210 12 18 337 4 330 3.43e-17 84.0
MS.gene94460.t1 AT2G29910 25.575 348 210 12 18 337 4 330 3.43e-17 84.0
MS.gene94460.t1 AT5G56810 31.034 232 127 8 11 226 5 219 4.21e-17 84.7
MS.gene94460.t1 AT1G55660 28.512 242 157 7 14 246 48 282 6.81e-17 84.3
MS.gene94460.t1 AT2G29910 25.648 347 209 12 19 337 29 354 7.59e-17 83.2
MS.gene94460.t1 AT3G49150 26.367 311 206 10 18 316 15 314 8.22e-17 84.0
MS.gene94460.t1 AT5G56410 28.311 219 142 3 26 229 10 228 8.65e-17 84.3
MS.gene94460.t1 AT3G03030 27.414 321 216 11 19 327 2 317 9.81e-17 82.4
MS.gene94460.t1 AT3G60040 27.378 347 202 14 18 337 12 335 1.09e-16 84.3
MS.gene94460.t1 AT1G51370 25.515 388 242 14 18 392 18 371 1.17e-16 83.2
MS.gene94460.t1 AT3G52680 29.046 241 156 5 1 234 1 233 1.28e-16 82.4
MS.gene94460.t1 AT3G60040 27.378 347 202 14 18 337 231 554 1.41e-16 84.3
MS.gene94460.t1 AT3G60040 27.378 347 202 14 18 337 232 555 1.44e-16 84.3
MS.gene94460.t1 AT1G51370 25.515 388 242 14 18 392 18 371 1.46e-16 83.2
MS.gene94460.t1 AT4G15060 27.984 243 160 7 13 246 18 254 1.81e-16 82.8
MS.gene94460.t1 AT3G60040 27.378 347 202 14 18 337 229 552 1.85e-16 83.6
MS.gene94460.t1 AT3G60040 27.378 347 202 14 18 337 231 554 1.99e-16 83.6
MS.gene94460.t1 AT3G28410 26.273 373 231 16 7 368 18 357 2.17e-16 82.8
MS.gene94460.t1 AT3G52680 29.046 241 156 5 1 234 1 233 2.20e-16 82.8
MS.gene94460.t1 AT5G22670 26.154 390 259 8 18 396 10 381 2.27e-16 82.4
MS.gene94460.t1 AT3G62440 27.851 377 225 15 19 366 2 360 2.53e-16 82.4
MS.gene94460.t1 AT3G59180 29.391 279 161 11 105 364 62 323 2.99e-16 82.4
MS.gene94460.t1 AT3G58930 26.836 354 213 16 19 339 2 342 3.36e-16 82.0
MS.gene94460.t1 AT3G58930 26.836 354 213 16 19 339 2 342 3.36e-16 82.0
MS.gene94460.t1 AT3G58930 26.836 354 213 16 19 339 2 342 3.36e-16 82.0
MS.gene94460.t1 AT3G49040 29.956 227 132 9 18 232 16 227 3.38e-16 80.5
MS.gene94460.t1 AT5G22730 26.216 370 227 13 18 364 27 373 3.39e-16 81.6
MS.gene94460.t1 AT1G78840 28.743 334 207 13 18 341 4 316 3.59e-16 81.6
MS.gene94460.t1 AT1G78840 28.743 334 207 13 18 341 4 316 3.59e-16 81.6
MS.gene94460.t1 AT4G00160 28.571 217 148 4 18 231 15 227 5.06e-16 81.6
MS.gene94460.t1 AT1G13780 25.076 331 209 11 19 325 10 325 5.68e-16 80.1
MS.gene94460.t1 AT5G22700 25.758 396 263 10 10 392 34 411 6.73e-16 81.3
MS.gene94460.t1 AT1G51370 25.496 353 223 12 18 364 18 336 6.94e-16 80.1
MS.gene94460.t1 AT5G22660 27.481 393 252 11 18 396 12 385 7.25e-16 80.9
MS.gene94460.t1 AT5G41630 24.716 352 234 9 13 339 6 351 9.61e-16 80.5
MS.gene94460.t1 AT3G44810 29.851 268 166 9 24 279 12 269 1.05e-15 80.5
MS.gene94460.t1 AT3G44060 24.845 322 217 10 24 337 4 308 1.25e-15 80.1
MS.gene94460.t1 AT3G03040 26.126 333 218 12 19 333 2 324 1.40e-15 80.1
MS.gene94460.t1 AT3G26930 28.767 219 144 2 18 236 20 226 2.78e-15 79.3
MS.gene94460.t1 AT1G06630 26.471 374 232 16 10 366 4 351 3.09e-15 78.2
MS.gene94460.t1 AT1G06630 26.471 374 232 16 10 366 4 351 3.09e-15 78.2
MS.gene94460.t1 AT1G66310 25.479 365 238 13 16 368 16 358 3.40e-15 79.0
MS.gene94460.t1 AT3G49030 28.169 213 144 4 18 227 20 226 4.47e-15 78.2
MS.gene94460.t1 AT3G49020 31.169 231 139 8 9 232 12 229 4.54e-15 78.6
MS.gene94460.t1 AT5G22700 26.098 387 255 10 19 392 6 374 4.73e-15 78.2
MS.gene94460.t1 AT5G22700 26.098 387 255 10 19 392 6 374 4.73e-15 78.2
MS.gene94460.t1 AT5G22700 26.098 387 255 10 19 392 6 374 4.73e-15 78.2
MS.gene94460.t1 AT5G22700 26.098 387 255 10 19 392 6 374 4.73e-15 78.2
MS.gene94460.t1 AT3G58900 28.125 320 213 11 19 328 2 314 5.25e-15 77.0
MS.gene94460.t1 AT3G49030 28.169 213 144 4 18 227 20 226 5.42e-15 78.2
MS.gene94460.t1 AT1G06630 26.471 374 232 16 10 366 13 360 5.62e-15 77.8
MS.gene94460.t1 AT1G06630 26.471 374 232 16 10 366 4 351 5.87e-15 77.8
MS.gene94460.t1 AT1G06630 26.471 374 232 16 10 366 4 351 5.87e-15 77.8
MS.gene94460.t1 AT1G06630 26.471 374 232 16 10 366 4 351 5.87e-15 77.8
MS.gene94460.t1 AT1G06630 26.471 374 232 16 10 366 4 351 5.87e-15 77.8
MS.gene94460.t1 AT3G58900 28.107 338 219 12 19 339 2 332 5.93e-15 78.2
MS.gene94460.t1 AT2G26860 27.477 222 142 5 19 230 2 214 6.56e-15 77.8
MS.gene94460.t1 AT2G26860 27.477 222 142 5 19 230 2 214 6.56e-15 77.8
MS.gene94460.t1 AT5G56440 28.571 266 177 10 19 280 2 258 7.44e-15 77.8
MS.gene94460.t1 AT3G58900 27.900 319 213 11 19 327 2 313 9.77e-15 76.3
MS.gene94460.t1 AT3G58900 27.900 319 213 11 19 327 2 313 9.77e-15 76.3
MS.gene94460.t1 AT5G38396 24.269 342 226 11 19 339 2 331 1.24e-14 77.0
MS.gene94460.t1 AT1G06630 26.575 365 226 15 19 366 12 351 1.43e-14 77.0
MS.gene94460.t1 AT5G22610 25.495 404 246 16 17 403 16 381 1.75e-14 76.6
MS.gene94460.t1 AT5G44490 28.700 223 140 5 18 231 16 228 1.81e-14 76.6
MS.gene94460.t1 AT4G15060 27.234 235 158 6 19 246 172 400 1.81e-14 77.0
MS.gene94460.t1 AT5G44490 28.251 223 141 5 18 231 16 228 1.82e-14 76.6
MS.gene94460.t1 AT2G26030 24.702 336 220 13 19 337 4 323 2.65e-14 75.9
MS.gene94460.t1 AT2G26030 24.702 336 220 13 19 337 4 323 2.65e-14 75.9
MS.gene94460.t1 AT3G58930 26.239 343 195 15 19 339 2 308 2.67e-14 76.3
MS.gene94460.t1 AT3G58930 26.239 343 195 15 19 339 2 308 2.67e-14 76.3
MS.gene94460.t1 AT2G26030 24.702 336 220 13 19 337 4 323 3.60e-14 75.5
MS.gene94460.t1 AT1G66320 23.592 373 248 14 15 371 25 376 6.78e-14 74.7
MS.gene94460.t1 AT5G22610 24.879 414 266 15 17 403 16 411 1.13e-13 74.3
MS.gene94460.t1 AT3G59150 26.649 379 246 13 19 378 13 378 1.25e-13 73.9
MS.gene94460.t1 AT1G56610 28.322 286 179 7 107 375 54 330 1.40e-13 73.6
MS.gene94460.t1 AT3G26922 25.128 195 137 2 35 227 1 188 1.68e-13 71.6
MS.gene94460.t1 AT3G26922 25.128 195 137 2 35 227 1 188 1.68e-13 71.6
MS.gene94460.t1 AT5G53635 27.650 217 139 5 20 229 1 206 1.86e-13 73.2
MS.gene94460.t1 AT4G13985 24.713 348 219 12 15 339 15 342 2.46e-13 73.2
MS.gene94460.t1 AT1G78760 25.126 398 249 16 18 396 15 382 2.64e-13 72.8
MS.gene94460.t1 AT5G18780 25.128 390 267 10 15 396 7 379 3.54e-13 72.4
MS.gene94460.t1 AT5G18780 25.128 390 267 10 15 396 7 379 3.54e-13 72.4
MS.gene94460.t1 AT5G44960 25.185 405 237 19 19 403 5 363 3.85e-13 72.4
MS.gene94460.t1 AT1G06630 27.338 278 168 12 18 279 11 270 4.19e-13 70.9
MS.gene94460.t1 AT5G18770 24.157 356 253 9 18 367 23 367 5.02e-13 71.6
MS.gene94460.t1 AT1G21990 24.156 385 225 15 18 366 8 361 6.56e-13 71.6
MS.gene94460.t1 AT1G32375 27.230 213 146 4 19 227 2 209 7.91e-13 71.2
MS.gene94460.t1 AT1G32375 27.230 213 146 4 19 227 2 209 7.91e-13 71.2
MS.gene94460.t1 AT5G18780 25.490 306 211 6 15 316 7 299 8.04e-13 70.9
MS.gene94460.t1 AT5G18780 25.490 306 211 6 15 316 7 299 8.04e-13 70.9
MS.gene94460.t1 AT3G59000 27.874 348 208 18 19 339 2 333 9.00e-13 71.6
MS.gene94460.t1 AT2G42720 25.948 343 208 12 19 339 2 320 1.00e-12 71.2
MS.gene94460.t1 AT4G26340 29.545 220 138 5 19 231 2 211 1.40e-12 70.5
MS.gene94460.t1 AT3G42770 26.059 307 200 12 24 318 4 295 1.46e-12 70.9
MS.gene94460.t1 AT5G18770 24.157 356 253 9 18 367 23 367 1.58e-12 70.5
MS.gene94460.t1 AT5G22720 25.061 411 249 17 18 399 22 402 1.76e-12 70.5
MS.gene94460.t1 AT5G02930 24.478 335 191 16 13 322 24 321 2.42e-12 70.1
MS.gene94460.t1 AT1G48400 30.035 283 172 15 18 286 9 279 2.49e-12 70.1
MS.gene94460.t1 AT1G52650 25.664 339 219 12 19 339 2 325 2.64e-12 69.7
MS.gene94460.t1 AT5G22700 25.632 277 193 4 10 282 34 301 2.81e-12 69.7
MS.gene94460.t1 AT1G48400 26.722 363 210 17 18 339 9 356 3.07e-12 69.7
MS.gene94460.t1 AT2G29930 27.907 258 146 11 122 368 1 229 3.30e-12 68.6
MS.gene94460.t1 AT5G53640 28.042 189 123 4 18 204 21 198 4.21e-12 66.6
MS.gene94460.t1 AT5G22660 27.796 313 198 8 18 317 12 309 4.44e-12 68.2
MS.gene94460.t1 AT5G56690 23.485 396 246 11 21 392 4 366 4.83e-12 68.6
MS.gene94460.t1 AT1G64540 27.011 348 195 16 18 337 4 320 4.97e-12 68.9
MS.gene94460.t1 AT1G64540 27.011 348 195 16 18 337 4 320 4.97e-12 68.9
MS.gene94460.t1 AT5G62970 24.331 411 249 15 26 401 10 393 6.53e-12 68.6
MS.gene94460.t1 AT5G56820 22.772 404 260 13 19 412 15 376 6.79e-12 68.6
MS.gene94460.t1 AT3G51530 27.895 190 126 5 18 206 29 208 7.40e-12 68.6
MS.gene94460.t1 AT5G38390 21.408 341 225 9 19 339 2 319 1.23e-11 67.8
MS.gene94460.t1 AT1G05080 28.571 217 147 4 12 226 7 217 1.30e-11 67.8
MS.gene94460.t1 AT3G58940 26.488 336 202 14 19 337 2 309 1.47e-11 67.8
MS.gene94460.t1 AT3G58940 26.488 336 202 14 19 337 2 309 1.47e-11 67.8
MS.gene94460.t1 AT4G10420 25.887 282 171 8 140 412 27 279 1.64e-11 66.2
MS.gene94460.t1 AT5G15620 26.997 363 227 13 19 366 2 341 1.92e-11 67.0
MS.gene94460.t1 AT5G38570 26.119 402 217 17 19 412 2 331 2.42e-11 66.2
MS.gene94460.t1 AT4G26350 26.178 191 131 4 19 206 2 185 4.19e-11 65.9
MS.gene94460.t1 AT5G60610 29.474 190 118 5 19 204 2 179 4.48e-11 65.5
MS.gene94460.t1 AT5G60610 29.474 190 118 5 19 204 2 179 4.48e-11 65.5
MS.gene94460.t1 AT5G56420 26.636 214 145 6 18 227 5 210 5.83e-11 65.5
MS.gene94460.t1 AT5G56420 26.636 214 145 6 18 227 5 210 5.83e-11 65.5
MS.gene94460.t1 AT5G56420 26.636 214 145 6 18 227 5 210 5.83e-11 65.5
MS.gene94460.t1 AT5G03100 24.923 325 211 13 15 333 5 302 6.60e-11 64.3
MS.gene94460.t1 AT5G03100 24.923 325 211 13 15 333 5 302 6.60e-11 64.3
MS.gene94460.t1 AT5G44980 24.331 411 269 17 18 412 3 387 8.82e-11 65.1
MS.gene94460.t1 AT5G44980 24.331 411 269 17 18 412 3 387 8.82e-11 65.1

Find 121 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGGTGTTCCTGTGTTTA+TGG 0.159690 5.1:+30161603 MS.gene94460:CDS
ATTGATCTACTTTACATTAA+AGG 0.169289 5.1:+30162375 MS.gene94460:CDS
ACATTAAAGGTGGAAATTTA+AGG 0.172495 5.1:+30162388 MS.gene94460:CDS
AATAAGTTGTGTTTAGAATT+TGG 0.196720 5.1:+30158960 MS.gene94460:CDS
TGACTTTGTATAAATTTATT+TGG 0.196914 5.1:+30159111 MS.gene94460:CDS
TTTCCACTTTGTAGCTAATA+TGG 0.218479 5.1:-30158640 None:intergenic
GGAGGAGGATGTTTGGGTTT+GGG 0.229054 5.1:+30160884 MS.gene94460:CDS
TTCCTGTGTTTATGGGTAGA+TGG 0.246394 5.1:+30161611 MS.gene94460:CDS
CTTTGGAGCTTATGTAAATT+TGG 0.253017 5.1:-30158516 None:intergenic
TTTCCACAAGACTCCTATTC+TGG 0.264425 5.1:+30159716 MS.gene94460:CDS
AACTTTACAGCTTCGATATC+AGG 0.268121 5.1:-30159955 None:intergenic
CCTAGCAAATGTACGGTTTA+GGG 0.289425 5.1:-30158898 None:intergenic
TTGGGATGCTGAGAAATTAT+TGG 0.306887 5.1:-30158931 None:intergenic
AGCTAATTCTTTGTTATCTT+CGG 0.308106 5.1:+30158842 MS.gene94460:CDS
TATACAAAGTCAACTCTTGT+AGG 0.311346 5.1:-30159100 None:intergenic
CGGAGGAGGATGTTTGGGTT+TGG 0.313049 5.1:+30160883 MS.gene94460:CDS
GGATGGGCCGCGTAGCTTAA+AGG 0.316915 5.1:-30159263 None:intergenic
AGATATAAAGTCTTCAAGTT+AGG 0.324587 5.1:-30159017 None:intergenic
CAAAAGACAATATGGCAGTT+AGG 0.329617 5.1:+30161118 MS.gene94460:CDS
AACACAACTTATTCAATGAT+TGG 0.333763 5.1:-30158950 None:intergenic
CAATTGAATCCTTACTTTCC+CGG 0.348379 5.1:-30162356 None:intergenic
AACAGAATCCACACTTCATT+TGG 0.356956 5.1:+30162189 MS.gene94460:CDS
TATCGCCTATATCATGTCTT+TGG 0.358479 5.1:-30158533 None:intergenic
TATGCAAAGTAGATTCCTTC+TGG 0.358841 5.1:-30162284 None:intergenic
ATATATGTGAAGACTCTTAC+CGG 0.358890 5.1:+30162337 MS.gene94460:CDS
TTCGGTGTTCCTGTGTTTAT+GGG 0.358992 5.1:+30161604 MS.gene94460:CDS
TTGATGCATGTATTGATCTT+AGG 0.359425 5.1:+30159324 MS.gene94460:CDS
ACCTAGCAAATGTACGGTTT+AGG 0.364496 5.1:-30158899 None:intergenic
ATCAATACATGCATCAACTA+TGG 0.366463 5.1:-30159318 None:intergenic
ATCCACGGAGGAGGATGTTT+GGG 0.366593 5.1:+30160878 MS.gene94460:CDS
TGTCTTGTCAAAAGACAATA+TGG 0.379961 5.1:+30161110 MS.gene94460:CDS
GAAGGAATCTACTTTGCATA+TGG 0.380936 5.1:+30162287 MS.gene94460:CDS
GGTTAGCAGAGGCCTAGTTT+TGG 0.392140 5.1:+30161645 MS.gene94460:CDS
TATCCACGGAGGAGGATGTT+TGG 0.393178 5.1:+30160877 MS.gene94460:CDS
AATATTTACAGCAAAGCAAT+TGG 0.393605 5.1:+30162132 MS.gene94460:CDS
AAGACATGATATAGGCGATA+TGG 0.399660 5.1:+30158536 MS.gene94460:CDS
ATTGAGCTATTGAGTCGATT+AGG 0.403004 5.1:+30159392 MS.gene94460:CDS
TGTTCTGGCTTTGATACATC+CGG 0.413809 5.1:-30158711 None:intergenic
ACACAACTTATTCAATGATT+GGG 0.417424 5.1:-30158949 None:intergenic
TTAGGGAAAATTTAAGATCA+AGG 0.420913 5.1:-30158881 None:intergenic
GTTCTTACAGTATCTTTAGT+AGG 0.426451 5.1:-30158615 None:intergenic
TGGGATGCTGAGAAATTATT+GGG 0.429808 5.1:-30158930 None:intergenic
ACGCATCTTGATGTGCCCTT+GGG 0.430661 5.1:+30159657 MS.gene94460:CDS
GACGCATCTTGATGTGCCCT+TGG 0.432063 5.1:+30159656 MS.gene94460:CDS
ATTTATGTCAAAACTTTGAC+AGG 0.432536 5.1:+30162238 MS.gene94460:CDS
GGGCATCAAATTCATTTCCT+TGG 0.437785 5.1:+30159878 MS.gene94460:CDS
GTTTGGGGTCCAGATGTGTT+TGG 0.450120 5.1:+30160900 MS.gene94460:CDS
TCCTGTGTTTATGGGTAGAT+GGG 0.450424 5.1:+30161612 MS.gene94460:CDS
AAAAGACAATATGGCAGTTA+GGG 0.451970 5.1:+30161119 MS.gene94460:CDS
GTTAGGGTTGTTATCCTAGT+GGG 0.452443 5.1:+30161135 MS.gene94460:CDS
TCACTGCAAGTTTGCAGCAA+TGG 0.453355 5.1:+30161218 MS.gene94460:CDS
GATATAAAGTCTTCAAGTTA+GGG 0.457943 5.1:-30159016 None:intergenic
ATGTGAAGAACTTCCAGAAT+AGG 0.460468 5.1:-30159729 None:intergenic
AATATCAAATGATACTCTTC+AGG 0.464997 5.1:+30159433 MS.gene94460:CDS
TGTATTGATCTTAGGTGTTA+CGG 0.466447 5.1:+30159332 MS.gene94460:CDS
CTTATTCTTGGATGAAGGAT+GGG 0.472897 5.1:+30159858 MS.gene94460:CDS
GAGGAGGATGTTTGGGTTTG+GGG 0.475553 5.1:+30160885 MS.gene94460:CDS
AAGCTCCAAAGACATGATAT+AGG 0.476550 5.1:+30158528 MS.gene94460:CDS
CAAACACTACCAAACACATC+TGG 0.478546 5.1:-30160909 None:intergenic
TCTTATTCTTGGATGAAGGA+TGG 0.482853 5.1:+30159857 MS.gene94460:CDS
GGATGTATCAAAGCCAGAAC+AGG 0.485361 5.1:+30158713 MS.gene94460:CDS
GGAAAATTGCCTCATAGATC+AGG 0.490060 5.1:+30158740 MS.gene94460:CDS
GGAAGTTCTTCACATTTCTA+CGG 0.491507 5.1:+30159737 MS.gene94460:CDS
AGACTCTTACCGGGAAAGTA+AGG 0.494418 5.1:+30162347 MS.gene94460:CDS
AAAGTCAACTCTTGTAGGAC+AGG 0.497729 5.1:-30159095 None:intergenic
CTGCGAATACGCAAATCACT+TGG 0.509908 5.1:-30159206 None:intergenic
CTTCACATTCAACCAAAACT+AGG 0.512222 5.1:-30161657 None:intergenic
CATTTGGTGCTTCAATTGAG+AGG 0.522844 5.1:+30162205 MS.gene94460:CDS
AATGCCTGCTAATACTTCAC+TGG 0.524472 5.1:-30159694 None:intergenic
ATGTTGCAATTTCCACACTA+AGG 0.526054 5.1:+30159153 MS.gene94460:CDS
ATCAAAATGATTTAAGTCGA+TGG 0.528780 5.1:-30159183 None:intergenic
CCCTAAACCGTACATTTGCT+AGG 0.535231 5.1:+30158898 MS.gene94460:CDS
TTAGGGAAACGTATACCATC+AGG 0.543658 5.1:-30158999 None:intergenic
TAGGGTTGTTATCCTAGTGG+GGG 0.544497 5.1:+30161137 MS.gene94460:CDS
GAATGCAAAGTCTTTCTACA+TGG 0.546122 5.1:-30158788 None:intergenic
GATCTACTTTACATTAAAGG+TGG 0.548742 5.1:+30162378 MS.gene94460:CDS
ATATGAAGAAGAACAGCCTC+GGG 0.552463 5.1:-30158579 None:intergenic
CCCACCAGTGAAGTATTAGC+AGG 0.559620 5.1:+30159690 MS.gene94460:CDS
CTTCCATATTAGCTACAAAG+TGG 0.559991 5.1:+30158637 MS.gene94460:CDS
GCCTGCTAATACTTCACTGG+TGG 0.560009 5.1:-30159691 None:intergenic
CTTCCAGAATAGGAGTCTTG+TGG 0.561403 5.1:-30159719 None:intergenic
CCTGCTAATACTTCACTGGT+GGG 0.561622 5.1:-30159690 None:intergenic
GTAGTGTTTGTCCACAGAGG+AGG 0.564019 5.1:+30160922 MS.gene94460:CDS
AATATGAAGAAGAACAGCCT+CGG 0.566198 5.1:-30158580 None:intergenic
GGAGAACGGTCGCATGCTTG+CGG 0.567681 5.1:+30162153 MS.gene94460:CDS
TGTGCATTTATCCACGGAGG+AGG 0.570238 5.1:+30160869 MS.gene94460:CDS
CATGCATCAACTATGGAGGA+AGG 0.573653 5.1:-30159311 None:intergenic
GTTTGTCCACCTGATCTATG+AGG 0.579288 5.1:-30158749 None:intergenic
CTACAAAGTGGAAATACTTG+TGG 0.581650 5.1:+30158649 MS.gene94460:CDS
ACACAAACCTAGCAAATGTA+CGG 0.585691 5.1:-30158905 None:intergenic
TTAGGGTTGTTATCCTAGTG+GGG 0.588973 5.1:+30161136 MS.gene94460:CDS
CGCATCTTGATGTGCCCTTG+GGG 0.589045 5.1:+30159658 MS.gene94460:CDS
AGTTAGGGTTGTTATCCTAG+TGG 0.592043 5.1:+30161134 MS.gene94460:CDS
TTGGTGCTTCAATTGAGAGG+TGG 0.594883 5.1:+30162208 MS.gene94460:CDS
AGGGTTGTTATCCTAGTGGG+GGG 0.595188 5.1:+30161138 MS.gene94460:CDS
TTCACTCTATATATACCTGA+TGG 0.598388 5.1:+30158984 MS.gene94460:CDS
ATCAAAGCCAGAACAGGAGT+CGG 0.606211 5.1:+30158719 MS.gene94460:CDS
TTGAAGCACCAAATGAAGTG+TGG 0.610544 5.1:-30162197 None:intergenic
ACAGCAAAGCAATTGGAGAA+CGG 0.611612 5.1:+30162139 MS.gene94460:CDS
ATGCATCAACTATGGAGGAA+GGG 0.624340 5.1:-30159310 None:intergenic
TATATGTGAAGACTCTTACC+GGG 0.624460 5.1:+30162338 MS.gene94460:CDS
GCAGGCTGTGCATTTATCCA+CGG 0.626871 5.1:+30160863 MS.gene94460:intron
CCTGTGTTTATGGGTAGATG+GGG 0.632298 5.1:+30161613 MS.gene94460:CDS
AAATTGCCTCATAGATCAGG+TGG 0.634665 5.1:+30158743 MS.gene94460:CDS
AGAAACTTGAAAATCAAAGA+CGG 0.640999 5.1:-30158682 None:intergenic
AGATGCGTCAAATTGAAGAA+CGG 0.641774 5.1:-30159642 None:intergenic
TTGGTAGTGTTTGTCCACAG+AGG 0.642079 5.1:+30160919 MS.gene94460:CDS
AACCCAAACATCCTCCTCCG+TGG 0.645948 5.1:-30160880 None:intergenic
AAGTCAACTCTTGTAGGACA+GGG 0.647735 5.1:-30159094 None:intergenic
AATACATGCATCAACTATGG+AGG 0.651047 5.1:-30159315 None:intergenic
TACTCATTACAATATCCAGA+AGG 0.653852 5.1:+30162269 MS.gene94460:CDS
GATGGTCAACTTCCTTAGTG+TGG 0.654929 5.1:-30159165 None:intergenic
AGAGAAGATGTGAAACACCA+AGG 0.658962 5.1:-30159895 None:intergenic
AAAATGAGAAGTCAGCTCAA+CGG 0.661026 5.1:+30159057 MS.gene94460:CDS
CCCCATCTACCCATAAACAC+AGG 0.661781 5.1:-30161613 None:intergenic
TGCGTCAAATTGAAGAACGG+AGG 0.663918 5.1:-30159639 None:intergenic
CTATGGAGGAAGGGTTAACG+AGG 0.681904 5.1:-30159301 None:intergenic
CACCCGAACAACCTCCTCTG+TGG 0.682420 5.1:-30160933 None:intergenic
TATGATTAGTGAATTACCCG+AGG 0.699428 5.1:+30158563 MS.gene94460:CDS
CTGCTAATACTTCACTGGTG+GGG 0.701325 5.1:-30159689 None:intergenic
GGCTGTGCATTTATCCACGG+AGG 0.702616 5.1:+30160866 MS.gene94460:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCACAAAAATAAATAAATAA+AGG - chr5.1:30160132-30160151 None:intergenic 10.0%
!! GGAATTATTATAAAAAGATT+TGG + chr5.1:30160026-30160045 MS.gene94460:intron 15.0%
!! TGACTTTGTATAAATTTATT+TGG + chr5.1:30159111-30159130 MS.gene94460:CDS 15.0%
!!! TTTATTTATTTTTGTGAGAA+TGG + chr5.1:30160135-30160154 MS.gene94460:intron 15.0%
!! AATACATAAAGAATATGCAA+TGG - chr5.1:30159549-30159568 None:intergenic 20.0%
!! ATTGATCTACTTTACATTAA+AGG + chr5.1:30162375-30162394 MS.gene94460:CDS 20.0%
!!! AATAAGTTGTGTTTAGAATT+TGG + chr5.1:30158960-30158979 MS.gene94460:CDS 20.0%
!!! CTTTTTCGTTTATCATTTAT+TGG + chr5.1:30160959-30160978 MS.gene94460:intron 20.0%
!!! GACAAATTTTATAATTGGAT+GGG - chr5.1:30159282-30159301 None:intergenic 20.0%
!!! GACTTATTTTCTATTAGATT+AGG + chr5.1:30161406-30161425 MS.gene94460:intron 20.0%
!!! TATTTTCTATTAGATTAGGA+AGG + chr5.1:30161410-30161429 MS.gene94460:intron 20.0%
!!! TTTTCTTAATGAAATCAGTT+TGG + chr5.1:30160989-30161008 MS.gene94460:intron 20.0%
!!! TTTTTATTGATTCTTGTGTA+GGG + chr5.1:30159829-30159848 MS.gene94460:intron 20.0%
!!! TTTTTTATTGATTCTTGTGT+AGG + chr5.1:30159828-30159847 MS.gene94460:intron 20.0%
! AAAGTGAAAGTTCTATAAAC+TGG - chr5.1:30160241-30160260 None:intergenic 25.0%
! AACACAACTTATTCAATGAT+TGG - chr5.1:30158953-30158972 None:intergenic 25.0%
! AACGTCATTATATGATAGAA+AGG - chr5.1:30161750-30161769 None:intergenic 25.0%
! AATATCAAATGATACTCTTC+AGG + chr5.1:30159433-30159452 MS.gene94460:CDS 25.0%
! AATATTTACAGCAAAGCAAT+TGG + chr5.1:30162132-30162151 MS.gene94460:CDS 25.0%
! AATTTATTGACAATGTTGCT+TGG + chr5.1:30159508-30159527 MS.gene94460:intron 25.0%
! ACACAACTTATTCAATGATT+GGG - chr5.1:30158952-30158971 None:intergenic 25.0%
! ACATTAAAGGTGGAAATTTA+AGG + chr5.1:30162388-30162407 MS.gene94460:CDS 25.0%
! AGAAACTTGAAAATCAAAGA+CGG - chr5.1:30158685-30158704 None:intergenic 25.0%
! ATAAATTTGAATTCCCAAGT+TGG + chr5.1:30160408-30160427 MS.gene94460:intron 25.0%
! ATCAAAATGATTTAAGTCGA+TGG - chr5.1:30159186-30159205 None:intergenic 25.0%
! ATTTAACCACAATCTAAGTT+TGG - chr5.1:30160187-30160206 None:intergenic 25.0%
! ATTTATGTCAAAACTTTGAC+AGG + chr5.1:30162238-30162257 MS.gene94460:CDS 25.0%
! CGAATATGATATAATTGCTA+TGG + chr5.1:30161804-30161823 MS.gene94460:intron 25.0%
! CTGATTTCATTAAGAAAAAC+CGG - chr5.1:30160987-30161006 None:intergenic 25.0%
! GAAACATTGTCTAATTATAG+CGG + chr5.1:30161850-30161869 MS.gene94460:intron 25.0%
! TTTCTATCATATAATGACGT+TGG + chr5.1:30161749-30161768 MS.gene94460:intron 25.0%
!! AAAAAAACTGCAACTTTTGA+GGG - chr5.1:30161069-30161088 None:intergenic 25.0%
!! AAGAAATCAAAGTCTTTTCT+TGG + chr5.1:30161451-30161470 MS.gene94460:intron 25.0%
!! ACGAGGACAAATTTTATAAT+TGG - chr5.1:30159287-30159306 None:intergenic 25.0%
!! AGAATTTTTGCAAAAAGCTT+TGG + chr5.1:30161988-30162007 MS.gene94460:intron 25.0%
!! AGATATAAAGTCTTCAAGTT+AGG - chr5.1:30159020-30159039 None:intergenic 25.0%
!! AGCTAATTCTTTGTTATCTT+CGG + chr5.1:30158842-30158861 MS.gene94460:CDS 25.0%
!! ATTTATTGACAATGTTGCTT+GGG + chr5.1:30159509-30159528 MS.gene94460:intron 25.0%
!! GATATAAAGTCTTCAAGTTA+GGG - chr5.1:30159019-30159038 None:intergenic 25.0%
!! GGACAAATTTTATAATTGGA+TGG - chr5.1:30159283-30159302 None:intergenic 25.0%
!! TGTTCTATTTCAGATTTTCT+TGG + chr5.1:30159925-30159944 MS.gene94460:CDS 25.0%
!! TTAGGGAAAATTTAAGATCA+AGG - chr5.1:30158884-30158903 None:intergenic 25.0%
!! TTTTTCTTATTCTTGGATGA+AGG + chr5.1:30159853-30159872 MS.gene94460:CDS 25.0%
!!! AGTATTTTGCTGTTGATTTT+GGG - chr5.1:30159360-30159379 None:intergenic 25.0%
!!! TAGTATTTTGCTGTTGATTT+TGG - chr5.1:30159361-30159380 None:intergenic 25.0%
!!! TTATATTGTTGATTCTAGTG+AGG - chr5.1:30160392-30160411 None:intergenic 25.0%
!!! TTTTCAAGTTTCTTGTAATC+CGG + chr5.1:30158692-30158711 MS.gene94460:CDS 25.0%
AAAAGACAATATGGCAGTTA+GGG + chr5.1:30161119-30161138 MS.gene94460:CDS 30.0%
AAAGTTCTATAAACTGGCAT+TGG - chr5.1:30160235-30160254 None:intergenic 30.0%
AACCAAAACACTTTCCTTAA+CGG - chr5.1:30161342-30161361 None:intergenic 30.0%
AACTGTTGAACAATCAATCT+AGG - chr5.1:30160366-30160385 None:intergenic 30.0%
AGAGATTCTGTAGAGAAATA+CGG + chr5.1:30160524-30160543 MS.gene94460:intron 30.0%
ATATATGTGAAGACTCTTAC+CGG + chr5.1:30162337-30162356 MS.gene94460:CDS 30.0%
ATCAATACATGCATCAACTA+TGG - chr5.1:30159321-30159340 None:intergenic 30.0%
CATACTAAATAACGTACAAC+AGG - chr5.1:30161831-30161850 None:intergenic 30.0%
CATAGTTAAGACACTAGTAA+GGG - chr5.1:30159596-30159615 None:intergenic 30.0%
GATCTACTTTACATTAAAGG+TGG + chr5.1:30162378-30162397 MS.gene94460:CDS 30.0%
GTACAAAAAGCTGATATTGA+TGG + chr5.1:30158813-30158832 MS.gene94460:CDS 30.0%
GTTCTTACAGTATCTTTAGT+AGG - chr5.1:30158618-30158637 None:intergenic 30.0%
TACTCATTACAATATCCAGA+AGG + chr5.1:30162269-30162288 MS.gene94460:CDS 30.0%
TAGAACTTTCACTTTGTGAA+CGG + chr5.1:30160246-30160265 MS.gene94460:intron 30.0%
TATACAAAGTCAACTCTTGT+AGG - chr5.1:30159103-30159122 None:intergenic 30.0%
TCAAAGTGGACAGAAAAATT+TGG - chr5.1:30161291-30161310 None:intergenic 30.0%
TGTCTTGTCAAAAGACAATA+TGG + chr5.1:30161110-30161129 MS.gene94460:CDS 30.0%
TTCACTCTATATATACCTGA+TGG + chr5.1:30158984-30159003 MS.gene94460:CDS 30.0%
TTTCCACTTTGTAGCTAATA+TGG - chr5.1:30158643-30158662 None:intergenic 30.0%
! ATTGACTATGCAGTTTTTGT+GGG + chr5.1:30161165-30161184 MS.gene94460:CDS 30.0%
! CAAAAAAACTGCAACTTTTG+AGG - chr5.1:30161070-30161089 None:intergenic 30.0%
! GTAGGGATTTTTCTTATTCT+TGG + chr5.1:30159846-30159865 MS.gene94460:intron 30.0%
! TCTTATAATTGCCTCCTTTT+CGG + chr5.1:30161498-30161517 MS.gene94460:intron 30.0%
! TGTATTGATCTTAGGTGTTA+CGG + chr5.1:30159332-30159351 MS.gene94460:CDS 30.0%
! TTGATGCATGTATTGATCTT+AGG + chr5.1:30159324-30159343 MS.gene94460:CDS 30.0%
!! CTTTGGAGCTTATGTAAATT+TGG - chr5.1:30158519-30158538 None:intergenic 30.0%
!!! CAAAAGTTGCAGTTTTTTTG+TGG + chr5.1:30161070-30161089 MS.gene94460:CDS 30.0%
!!! GGAAAGTGTTTTGGTTAATT+TGG + chr5.1:30161346-30161365 MS.gene94460:intron 30.0%
!!! GTATTTTGCTGTTGATTTTG+GGG - chr5.1:30159359-30159378 None:intergenic 30.0%
!!! GTGATCTGTTTCTAACATTT+TGG + chr5.1:30162075-30162094 MS.gene94460:intron 30.0%
AAAATGAGAAGTCAGCTCAA+CGG + chr5.1:30159057-30159076 MS.gene94460:CDS 35.0%
AACAGAATCCACACTTCATT+TGG + chr5.1:30162189-30162208 MS.gene94460:CDS 35.0%
AACTTTACAGCTTCGATATC+AGG - chr5.1:30159958-30159977 None:intergenic 35.0%
AAGACATGATATAGGCGATA+TGG + chr5.1:30158536-30158555 MS.gene94460:CDS 35.0%
AAGATATTCCACGATAGCTA+AGG - chr5.1:30161928-30161947 None:intergenic 35.0%
AAGCTCCAAAGACATGATAT+AGG + chr5.1:30158528-30158547 MS.gene94460:CDS 35.0%
AAGTGGACAGAAAAATTTGG+TGG - chr5.1:30161288-30161307 None:intergenic 35.0%
AATACATGCATCAACTATGG+AGG - chr5.1:30159318-30159337 None:intergenic 35.0%
AATATGAAGAAGAACAGCCT+CGG - chr5.1:30158583-30158602 None:intergenic 35.0%
AATTGCAACATTTATGCCAG+GGG + chr5.1:30160073-30160092 MS.gene94460:intron 35.0%
ACACAAACCTAGCAAATGTA+CGG - chr5.1:30158908-30158927 None:intergenic 35.0%
AGATGCGTCAAATTGAAGAA+CGG - chr5.1:30159645-30159664 None:intergenic 35.0%
ATATCATATTCGACAGCAGT+CGG - chr5.1:30161796-30161815 None:intergenic 35.0%
ATGCAATGGTATGGTCAATT+TGG + chr5.1:30161370-30161389 MS.gene94460:intron 35.0%
ATGTGAAGAACTTCCAGAAT+AGG - chr5.1:30159732-30159751 None:intergenic 35.0%
ATGTTGCAATTTCCACACTA+AGG + chr5.1:30159153-30159172 MS.gene94460:CDS 35.0%
ATTCTCATGTGTTTCGTACT+TGG + chr5.1:30161021-30161040 MS.gene94460:intron 35.0%
ATTGAGCTATTGAGTCGATT+AGG + chr5.1:30159392-30159411 MS.gene94460:CDS 35.0%
CAAAAGACAATATGGCAGTT+AGG + chr5.1:30161118-30161137 MS.gene94460:CDS 35.0%
CAATTGAATCCTTACTTTCC+CGG - chr5.1:30162359-30162378 None:intergenic 35.0%
CAATTGCAACATTTATGCCA+GGG + chr5.1:30160072-30160091 MS.gene94460:intron 35.0%
CACAAAATTGTTGCCAACTT+GGG - chr5.1:30160424-30160443 None:intergenic 35.0%
CTACAAAGTGGAAATACTTG+TGG + chr5.1:30158649-30158668 MS.gene94460:CDS 35.0%
CTTATTCTTGGATGAAGGAT+GGG + chr5.1:30159858-30159877 MS.gene94460:CDS 35.0%
CTTCACATTCAACCAAAACT+AGG - chr5.1:30161660-30161679 None:intergenic 35.0%
CTTCCATATTAGCTACAAAG+TGG + chr5.1:30158637-30158656 MS.gene94460:CDS 35.0%
GAAGGAATCTACTTTGCATA+TGG + chr5.1:30162287-30162306 MS.gene94460:CDS 35.0%
GAATGCAAAGTCTTTCTACA+TGG - chr5.1:30158791-30158810 None:intergenic 35.0%
GAGATTCTGTAGAGAAATAC+GGG + chr5.1:30160525-30160544 MS.gene94460:intron 35.0%
GCATAGTTAAGACACTAGTA+AGG - chr5.1:30159597-30159616 None:intergenic 35.0%
GGAAGTTCTTCACATTTCTA+CGG + chr5.1:30159737-30159756 MS.gene94460:CDS 35.0%
GGAGATCAACATATTCTGTT+CGG + chr5.1:30160005-30160024 MS.gene94460:intron 35.0%
TAATGACGTTGGACATGTAT+TGG + chr5.1:30161760-30161779 MS.gene94460:intron 35.0%
TAATTTGGCATGCAATGGTA+TGG + chr5.1:30161361-30161380 MS.gene94460:intron 35.0%
TAGAAAATGCCACAGTCTTA+GGG + chr5.1:30159983-30160002 MS.gene94460:intron 35.0%
TATATGTGAAGACTCTTACC+GGG + chr5.1:30162338-30162357 MS.gene94460:CDS 35.0%
TATCGCCTATATCATGTCTT+TGG - chr5.1:30158536-30158555 None:intergenic 35.0%
TATGATTAGTGAATTACCCG+AGG + chr5.1:30158563-30158582 MS.gene94460:CDS 35.0%
TATGCAAAGTAGATTCCTTC+TGG - chr5.1:30162287-30162306 None:intergenic 35.0%
TCAATTGCAACATTTATGCC+AGG + chr5.1:30160071-30160090 MS.gene94460:intron 35.0%
TCACAAAATTGTTGCCAACT+TGG - chr5.1:30160425-30160444 None:intergenic 35.0%
TCTATTTCGGAGCAAAAGAA+GGG + chr5.1:30160726-30160745 MS.gene94460:intron 35.0%
TCTTATTCTTGGATGAAGGA+TGG + chr5.1:30159857-30159876 MS.gene94460:CDS 35.0%
TGGGATGCTGAGAAATTATT+GGG - chr5.1:30158933-30158952 None:intergenic 35.0%
TTACTATTAGCCGTGAAACA+TGG - chr5.1:30159788-30159807 None:intergenic 35.0%
TTAGAAAATGCCACAGTCTT+AGG + chr5.1:30159982-30160001 MS.gene94460:intron 35.0%
TTCTATTTCGGAGCAAAAGA+AGG + chr5.1:30160725-30160744 MS.gene94460:intron 35.0%
TTGGGATGCTGAGAAATTAT+TGG - chr5.1:30158934-30158953 None:intergenic 35.0%
! AAAGTCTTTTCTTGGAGATG+GGG + chr5.1:30161459-30161478 MS.gene94460:intron 35.0%
! AGATTTTGTAGAGTGGAATC+TGG + chr5.1:30160552-30160571 MS.gene94460:intron 35.0%
! ATGGAGAATGAGAATTTTGC+AGG + chr5.1:30160824-30160843 MS.gene94460:intron 35.0%
! ATTTTGTAGAGTGGAATCTG+GGG + chr5.1:30160554-30160573 MS.gene94460:intron 35.0%
! CAAAGTCTTTTCTTGGAGAT+GGG + chr5.1:30161458-30161477 MS.gene94460:intron 35.0%
! GATTGACTATGCAGTTTTTG+TGG + chr5.1:30161164-30161183 MS.gene94460:CDS 35.0%
! GATTTTGTAGAGTGGAATCT+GGG + chr5.1:30160553-30160572 MS.gene94460:intron 35.0%
! GTTTCGTACTTGGTAGTATT+TGG + chr5.1:30161031-30161050 MS.gene94460:intron 35.0%
! TCAAAGTCTTTTCTTGGAGA+TGG + chr5.1:30161457-30161476 MS.gene94460:intron 35.0%
! TCAATTTGGAACGCAAGAAA+TGG + chr5.1:30161384-30161403 MS.gene94460:intron 35.0%
! TCTTTTACCTTTAAGCTACG+CGG + chr5.1:30159256-30159275 MS.gene94460:CDS 35.0%
! TTAGTGTGTTTCAGTGGTTT+TGG + chr5.1:30161247-30161266 MS.gene94460:intron 35.0%
! TTGACTATGCAGTTTTTGTG+GGG + chr5.1:30161166-30161185 MS.gene94460:CDS 35.0%
! TTGGTTAATTTGGCATGCAA+TGG + chr5.1:30161356-30161375 MS.gene94460:intron 35.0%
! TTTGGTTTAGTGTGTTTCAG+TGG + chr5.1:30161241-30161260 MS.gene94460:intron 35.0%
!! ACTATTGTTTCTGCAATCAG+CGG + chr5.1:30161895-30161914 MS.gene94460:intron 35.0%
!! CGTTTATCATTTATTGGCTC+CGG + chr5.1:30160965-30160984 MS.gene94460:intron 35.0%
!! TACTTTGCATATGGTTTTGC+AGG + chr5.1:30162296-30162315 MS.gene94460:CDS 35.0%
!! TCACCGGTTGTTTTCTATTT+CGG + chr5.1:30160713-30160732 MS.gene94460:intron 35.0%
!! TGAATGTGAAGGTTTTGTGT+TGG + chr5.1:30161669-30161688 MS.gene94460:intron 35.0%
!!! ATTTTGGTTAGATGTGTGGA+CGG + chr5.1:30160665-30160684 MS.gene94460:intron 35.0%
!!! CTAGATTTTGGTTAGATGTG+TGG + chr5.1:30160661-30160680 MS.gene94460:intron 35.0%
!!! CTAGTTTTGGTTGAATGTGA+AGG + chr5.1:30161658-30161677 MS.gene94460:CDS 35.0%
!!! GCACTGGTTTTACTAGATTT+TGG + chr5.1:30160649-30160668 MS.gene94460:intron 35.0%
!!! TCAGTTGTTCTTGCGTTTTT+TGG + chr5.1:30161580-30161599 MS.gene94460:CDS 35.0%
AAAGTCAACTCTTGTAGGAC+AGG - chr5.1:30159098-30159117 None:intergenic 40.0%
AAATTGCCTCATAGATCAGG+TGG + chr5.1:30158743-30158762 MS.gene94460:CDS 40.0%
AAGTCAACTCTTGTAGGACA+GGG - chr5.1:30159097-30159116 None:intergenic 40.0%
AATCACTCCAAGCACTTACA+AGG - chr5.1:30161537-30161556 None:intergenic 40.0%
AATGCCTGCTAATACTTCAC+TGG - chr5.1:30159697-30159716 None:intergenic 40.0%
ACAGCAAAGCAATTGGAGAA+CGG + chr5.1:30162139-30162158 MS.gene94460:CDS 40.0%
ACCTAGCAAATGTACGGTTT+AGG - chr5.1:30158902-30158921 None:intergenic 40.0%
AGAAAATGCCACAGTCTTAG+GGG + chr5.1:30159984-30160003 MS.gene94460:intron 40.0%
AGAGAAGATGTGAAACACCA+AGG - chr5.1:30159898-30159917 None:intergenic 40.0%
AGTTAGGGTTGTTATCCTAG+TGG + chr5.1:30161134-30161153 MS.gene94460:CDS 40.0%
ATATGAAGAAGAACAGCCTC+GGG - chr5.1:30158582-30158601 None:intergenic 40.0%
ATGCATCAACTATGGAGGAA+GGG - chr5.1:30159313-30159332 None:intergenic 40.0%
CAAACACTACCAAACACATC+TGG - chr5.1:30160912-30160931 None:intergenic 40.0%
CATCGAATTCAGAACAAGCT+GGG - chr5.1:30162015-30162034 None:intergenic 40.0%
CCTAGCAAATGTACGGTTTA+GGG - chr5.1:30158901-30158920 None:intergenic 40.0%
GCATCACCAAACTTAGATTG+TGG + chr5.1:30160178-30160197 MS.gene94460:intron 40.0%
GCTCCGAAATAGAAAACAAC+CGG - chr5.1:30160719-30160738 None:intergenic 40.0%
GCTTCTTCTACCATGTTTCA+CGG + chr5.1:30159775-30159794 MS.gene94460:intron 40.0%
GGAAAATTGCCTCATAGATC+AGG + chr5.1:30158740-30158759 MS.gene94460:CDS 40.0%
GGGCATCAAATTCATTTCCT+TGG + chr5.1:30159878-30159897 MS.gene94460:CDS 40.0%
GTAAGTGCTTGGAGTGATTT+GGG + chr5.1:30161538-30161557 MS.gene94460:intron 40.0%
GTTAGGGTTGTTATCCTAGT+GGG + chr5.1:30161135-30161154 MS.gene94460:CDS 40.0%
TAAGTGCTTGGAGTGATTTG+GGG + chr5.1:30161539-30161558 MS.gene94460:intron 40.0%
TATTGGAGGGGTAGATATGA+TGG + chr5.1:30160619-30160638 MS.gene94460:intron 40.0%
TCAAGTGTTAAGTCAGCTAG+AGG + chr5.1:30160479-30160498 MS.gene94460:intron 40.0%
TCAGACACGTTCAGAAATGT+CGG + chr5.1:30161701-30161720 MS.gene94460:intron 40.0%
TCCACTTTGAATGTTCGAGT+GGG + chr5.1:30161301-30161320 MS.gene94460:intron 40.0%
TCCTGTGTTTATGGGTAGAT+GGG + chr5.1:30161612-30161631 MS.gene94460:CDS 40.0%
TGTAAGTGCTTGGAGTGATT+TGG + chr5.1:30161537-30161556 MS.gene94460:intron 40.0%
TTAGATTAGGAAGGATCCCT+TGG + chr5.1:30161419-30161438 MS.gene94460:intron 40.0%
TTAGGGAAACGTATACCATC+AGG - chr5.1:30159002-30159021 None:intergenic 40.0%
TTAGGGTTGTTATCCTAGTG+GGG + chr5.1:30161136-30161155 MS.gene94460:CDS 40.0%
TTCCTGTGTTTATGGGTAGA+TGG + chr5.1:30161611-30161630 MS.gene94460:CDS 40.0%
TTCTGTATTGTTCTTCGTGC+TGG + chr5.1:30160588-30160607 MS.gene94460:intron 40.0%
TTTCCACAAGACTCCTATTC+TGG + chr5.1:30159716-30159735 MS.gene94460:CDS 40.0%
! ATAATTGCCTCCTTTTCGGA+TGG + chr5.1:30161502-30161521 MS.gene94460:intron 40.0%
! GGCGATGTGTCATTAAGTTT+CGG + chr5.1:30160094-30160113 MS.gene94460:intron 40.0%
! GGGAAAGAGATTTTGTAGAG+TGG + chr5.1:30160545-30160564 MS.gene94460:intron 40.0%
! TTGAAGCACCAAATGAAGTG+TGG - chr5.1:30162200-30162219 None:intergenic 40.0%
!! AGCTGACTTCTCATTTTCGA+AGG - chr5.1:30159054-30159073 None:intergenic 40.0%
!! CATTTGGTGCTTCAATTGAG+AGG + chr5.1:30162205-30162224 MS.gene94460:CDS 40.0%
!! GGTCTTATTGTCTTTACTGC+AGG + chr5.1:30160845-30160864 MS.gene94460:intron 40.0%
!! GTTGATAACCTTAGCTATCG+TGG + chr5.1:30161917-30161936 MS.gene94460:intron 40.0%
!! TAAGTCAGCTAGAGGCATTA+GGG + chr5.1:30160487-30160506 MS.gene94460:intron 40.0%
!! TGTTCTGGCTTTGATACATC+CGG - chr5.1:30158714-30158733 None:intergenic 40.0%
!! TTAAGTCAGCTAGAGGCATT+AGG + chr5.1:30160486-30160505 MS.gene94460:intron 40.0%
!! TTCGGTGTTCCTGTGTTTAT+GGG + chr5.1:30161604-30161623 MS.gene94460:CDS 40.0%
!! TTTTGGTTAGATGTGTGGAC+GGG + chr5.1:30160666-30160685 MS.gene94460:intron 40.0%
!!! AGCCGTTAAGGAAAGTGTTT+TGG + chr5.1:30161337-30161356 MS.gene94460:intron 40.0%
!!! GTTCTTGCGTTTTTTGGCTT+CGG + chr5.1:30161586-30161605 MS.gene94460:CDS 40.0%
!!! TCAGTGGTTTTGGTTGTTTC+TGG + chr5.1:30161257-30161276 MS.gene94460:intron 40.0%
ACCCACTCGAACATTCAAAG+TGG - chr5.1:30161305-30161324 None:intergenic 45.0%
AGACTCTTACCGGGAAAGTA+AGG + chr5.1:30162347-30162366 MS.gene94460:CDS 45.0%
AGGCATTAGGGGAGAAATAC+AGG + chr5.1:30160499-30160518 MS.gene94460:intron 45.0%
AGGGGTAGATATGATGGCAA+GGG + chr5.1:30160625-30160644 MS.gene94460:intron 45.0%
ATCAAAGCCAGAACAGGAGT+CGG + chr5.1:30158719-30158738 MS.gene94460:CDS 45.0%
ATTTCTTTCGCCACCTCCAA+GGG - chr5.1:30161438-30161457 None:intergenic 45.0%
CATGCATCAACTATGGAGGA+AGG - chr5.1:30159314-30159333 None:intergenic 45.0%
CCATCGAATTCAGAACAAGC+TGG - chr5.1:30162016-30162035 None:intergenic 45.0%
CCCTAAACCGTACATTTGCT+AGG + chr5.1:30158898-30158917 MS.gene94460:CDS 45.0%
CCTGCTAATACTTCACTGGT+GGG - chr5.1:30159693-30159712 None:intergenic 45.0%
CCTGTGTTTATGGGTAGATG+GGG + chr5.1:30161613-30161632 MS.gene94460:CDS 45.0%
CGGTGAAAACTCTCGCTTAA+CGG - chr5.1:30160699-30160718 None:intergenic 45.0%
CTGCGAATACGCAAATCACT+TGG - chr5.1:30159209-30159228 None:intergenic 45.0%
CTGCTAATACTTCACTGGTG+GGG - chr5.1:30159692-30159711 None:intergenic 45.0%
CTGGTGGAAAGATATTGGAG+GGG + chr5.1:30160607-30160626 MS.gene94460:intron 45.0%
CTTCCAGAATAGGAGTCTTG+TGG - chr5.1:30159722-30159741 None:intergenic 45.0%
GAATGAGGAAAGGTGAGGTT+TGG + chr5.1:30160766-30160785 MS.gene94460:intron 45.0%
GATGGTCAACTTCCTTAGTG+TGG - chr5.1:30159168-30159187 None:intergenic 45.0%
GCAAGTTTGCAGCAATGGTT+TGG + chr5.1:30161223-30161242 MS.gene94460:intron 45.0%
GCTGGTGGAAAGATATTGGA+GGG + chr5.1:30160606-30160625 MS.gene94460:intron 45.0%
GGATGTATCAAAGCCAGAAC+AGG + chr5.1:30158713-30158732 MS.gene94460:CDS 45.0%
GTCCACTTTGAATGTTCGAG+TGG + chr5.1:30161300-30161319 MS.gene94460:intron 45.0%
GTGGGGTAAAAATACCCCAA+GGG - chr5.1:30159675-30159694 None:intergenic 45.0%
GTTTGTCCACCTGATCTATG+AGG - chr5.1:30158752-30158771 None:intergenic 45.0%
TAGGGTTGTTATCCTAGTGG+GGG + chr5.1:30161137-30161156 MS.gene94460:CDS 45.0%
TCACTGCAAGTTTGCAGCAA+TGG + chr5.1:30161218-30161237 MS.gene94460:CDS 45.0%
TGCGTCAAATTGAAGAACGG+AGG - chr5.1:30159642-30159661 None:intergenic 45.0%
TGCTGGTGGAAAGATATTGG+AGG + chr5.1:30160605-30160624 MS.gene94460:intron 45.0%
TGTATTGTTCTTCGTGCTGG+TGG + chr5.1:30160591-30160610 MS.gene94460:intron 45.0%
TTCGGAGCAAAAGAAGGGTA+CGG + chr5.1:30160731-30160750 MS.gene94460:intron 45.0%
TTGGGATCCTTGTAAGTGCT+TGG + chr5.1:30161527-30161546 MS.gene94460:intron 45.0%
! AAGTGCTTGGAGTGATTTGG+GGG + chr5.1:30161540-30161559 MS.gene94460:intron 45.0%
! CAATTTTCCGACTCCTGTTC+TGG - chr5.1:30158729-30158748 None:intergenic 45.0%
! CCAGCTTGTTCTGAATTCGA+TGG + chr5.1:30162013-30162032 MS.gene94460:intron 45.0%
! CGTTAAGCGAGAGTTTTCAC+CGG + chr5.1:30160697-30160716 MS.gene94460:intron 45.0%
! CTATGCAGTTTTTGTGGGGA+AGG + chr5.1:30161170-30161189 MS.gene94460:CDS 45.0%
! TCGTGCTGGTGGAAAGATAT+TGG + chr5.1:30160602-30160621 MS.gene94460:intron 45.0%
! TTGGTGCTTCAATTGAGAGG+TGG + chr5.1:30162208-30162227 MS.gene94460:CDS 45.0%
!! AAGTCAGCTAGAGGCATTAG+GGG + chr5.1:30160488-30160507 MS.gene94460:intron 45.0%
!! CATATGGTTTTGCAGGTTCG+TGG + chr5.1:30162303-30162322 MS.gene94460:CDS 45.0%
!! CTTCGGTGTTCCTGTGTTTA+TGG + chr5.1:30161603-30161622 MS.gene94460:CDS 45.0%
!! TTGGTAGTGTTTGTCCACAG+AGG + chr5.1:30160919-30160938 MS.gene94460:CDS 45.0%
!!! GGAGTCTTTTTGGTTAGCAG+AGG + chr5.1:30161634-30161653 MS.gene94460:CDS 45.0%
ACGCATCTTGATGTGCCCTT+GGG + chr5.1:30159657-30159676 MS.gene94460:CDS 50.0%
ACTTAATGACACATCGCCCC+TGG - chr5.1:30160092-30160111 None:intergenic 50.0%
AGCGAGGTGAGAATGAGGAA+AGG + chr5.1:30160756-30160775 MS.gene94460:intron 50.0%
AGGGTTGTTATCCTAGTGGG+GGG + chr5.1:30161138-30161157 MS.gene94460:CDS 50.0%
ATCCACGGAGGAGGATGTTT+GGG + chr5.1:30160878-30160897 MS.gene94460:CDS 50.0%
CCCCATCTACCCATAAACAC+AGG - chr5.1:30161616-30161635 None:intergenic 50.0%
CTATGGAGGAAGGGTTAACG+AGG - chr5.1:30159304-30159323 None:intergenic 50.0%
CTGCGTGATGTAAGCCGTTA+AGG + chr5.1:30161325-30161344 MS.gene94460:intron 50.0%
GAGGGGTAGATATGATGGCA+AGG + chr5.1:30160624-30160643 MS.gene94460:intron 50.0%
GATCCCAACACCATCCGAAA+AGG - chr5.1:30161515-30161534 None:intergenic 50.0%
GATTAGGAAGGATCCCTTGG+AGG + chr5.1:30161422-30161441 MS.gene94460:intron 50.0%
GATTTCTTTCGCCACCTCCA+AGG - chr5.1:30161439-30161458 None:intergenic 50.0%
GCAGGCTGTGCATTTATCCA+CGG + chr5.1:30160863-30160882 MS.gene94460:intron 50.0%
GCCTGCTAATACTTCACTGG+TGG - chr5.1:30159694-30159713 None:intergenic 50.0%
GGCATAGGAGGTTGTTCGAA+TGG + chr5.1:30160805-30160824 MS.gene94460:intron 50.0%
GGTGAGAATGAGGAAAGGTG+AGG + chr5.1:30160761-30160780 MS.gene94460:intron 50.0%
GGTGGGGTAAAAATACCCCA+AGG - chr5.1:30159676-30159695 None:intergenic 50.0%
GTAGTGTTTGTCCACAGAGG+AGG + chr5.1:30160922-30160941 MS.gene94460:CDS 50.0%
GTTGATCTCCCCTAAGACTG+TGG - chr5.1:30159995-30160014 None:intergenic 50.0%
TATCCACGGAGGAGGATGTT+TGG + chr5.1:30160877-30160896 MS.gene94460:CDS 50.0%
TCTTGGAGATGGGGATTGAG+CGG + chr5.1:30161468-30161487 MS.gene94460:intron 50.0%
TGAGGAAAGGTGAGGTTTGG+AGG + chr5.1:30160769-30160788 MS.gene94460:intron 50.0%
TGTCCACAGAGGAGGTTGTT+CGG + chr5.1:30160930-30160949 MS.gene94460:intron 50.0%
TGTGCATTTATCCACGGAGG+AGG + chr5.1:30160869-30160888 MS.gene94460:CDS 50.0%
TTTGGAGGTGGTCGTTCACT+TGG + chr5.1:30160784-30160803 MS.gene94460:intron 50.0%
! ATATGATGGCAAGGGAGCAC+TGG + chr5.1:30160633-30160652 MS.gene94460:intron 50.0%
! CAGCTCAACGGCTTTTGTCT+GGG + chr5.1:30159069-30159088 MS.gene94460:CDS 50.0%
! CCCACCAGTGAAGTATTAGC+AGG + chr5.1:30159690-30159709 MS.gene94460:CDS 50.0%
! CCTCCTTTTCGGATGGTGTT+GGG + chr5.1:30161509-30161528 MS.gene94460:intron 50.0%
! GAGGAGGATGTTTGGGTTTG+GGG + chr5.1:30160885-30160904 MS.gene94460:CDS 50.0%
! GGAGGAGGATGTTTGGGTTT+GGG + chr5.1:30160884-30160903 MS.gene94460:CDS 50.0%
! GGGTAGATGGGGAGTCTTTT+TGG + chr5.1:30161624-30161643 MS.gene94460:CDS 50.0%
! GGTTAGCAGAGGCCTAGTTT+TGG + chr5.1:30161645-30161664 MS.gene94460:CDS 50.0%
! GTTAGATGTGTGGACGGGTT+TGG + chr5.1:30160671-30160690 MS.gene94460:intron 50.0%
! GTTTGGGGTCCAGATGTGTT+TGG + chr5.1:30160900-30160919 MS.gene94460:CDS 50.0%
! TCAGCTCAACGGCTTTTGTC+TGG + chr5.1:30159068-30159087 MS.gene94460:CDS 50.0%
! TGCAGTTTTTGTGGGGAAGG+TGG + chr5.1:30161173-30161192 MS.gene94460:CDS 50.0%
!! ATGGTTTTGCAGGTTCGTGG+TGG + chr5.1:30162306-30162325 MS.gene94460:CDS 50.0%
!! TGGAGAAGCTTGCTGATGTC+AGG + chr5.1:30160046-30160065 MS.gene94460:intron 50.0%
AACCCAAACATCCTCCTCCG+TGG - chr5.1:30160883-30160902 None:intergenic 55.0%
AGTCAATCGAACCCCCCACT+AGG - chr5.1:30161152-30161171 None:intergenic 55.0%
CCCAACACCATCCGAAAAGG+AGG - chr5.1:30161512-30161531 None:intergenic 55.0%
CGCATCTTGATGTGCCCTTG+GGG + chr5.1:30159658-30159677 MS.gene94460:CDS 55.0%
CTTGGAGATGGGGATTGAGC+GGG + chr5.1:30161469-30161488 MS.gene94460:intron 55.0%
GACGCATCTTGATGTGCCCT+TGG + chr5.1:30159656-30159675 MS.gene94460:CDS 55.0%
GGAAAGGTGAGGTTTGGAGG+TGG + chr5.1:30160772-30160791 MS.gene94460:intron 55.0%
GGCTGTGCATTTATCCACGG+AGG + chr5.1:30160866-30160885 MS.gene94460:intron 55.0%
GGTCGTTCACTTGGCATAGG+AGG + chr5.1:30160793-30160812 MS.gene94460:intron 55.0%
GGTGGTCGTTCACTTGGCAT+AGG + chr5.1:30160790-30160809 MS.gene94460:intron 55.0%
GTAGAGTGGAATCTGGGGAG+AGG + chr5.1:30160559-30160578 MS.gene94460:intron 55.0%
GTCCACAGAGGAGGTTGTTC+GGG + chr5.1:30160931-30160950 MS.gene94460:intron 55.0%
TAGGAAGGATCCCTTGGAGG+TGG + chr5.1:30161425-30161444 MS.gene94460:intron 55.0%
! AAAGAAGGGTACGGTGAGCG+AGG + chr5.1:30160740-30160759 MS.gene94460:intron 55.0%
! CGGAGGAGGATGTTTGGGTT+TGG + chr5.1:30160883-30160902 MS.gene94460:CDS 55.0%
! CTTGGAGTGATTTGGGGGTG+GGG + chr5.1:30161545-30161564 MS.gene94460:intron 55.0%
! GCCTCCTTTTCGGATGGTGT+TGG + chr5.1:30161508-30161527 MS.gene94460:intron 55.0%
! GCTTGGAGTGATTTGGGGGT+GGG + chr5.1:30161544-30161563 MS.gene94460:intron 55.0%
! TGCTTGGAGTGATTTGGGGG+TGG + chr5.1:30161543-30161562 MS.gene94460:intron 55.0%
! TTGGAGTGATTTGGGGGTGG+GGG + chr5.1:30161546-30161565 MS.gene94460:intron 55.0%
CACAGAGGAGGTTGTTCGGG+TGG + chr5.1:30160934-30160953 MS.gene94460:intron 60.0%
CACCCGAACAACCTCCTCTG+TGG - chr5.1:30160936-30160955 None:intergenic 60.0%
CGGTGAGCGAGGTGAGAATG+AGG + chr5.1:30160751-30160770 MS.gene94460:intron 60.0%
GGAGAACGGTCGCATGCTTG+CGG + chr5.1:30162153-30162172 MS.gene94460:CDS 60.0%
GGATGGGCCGCGTAGCTTAA+AGG - chr5.1:30159266-30159285 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 30158507 30162425 30158507 ID=MS.gene94460
chr5.1 mRNA 30158507 30162425 30158507 ID=MS.gene94460.t1;Parent=MS.gene94460
chr5.1 exon 30158507 30159454 30158507 ID=MS.gene94460.t1.exon1;Parent=MS.gene94460.t1
chr5.1 CDS 30158507 30159454 30158507 ID=cds.MS.gene94460.t1;Parent=MS.gene94460.t1
chr5.1 exon 30159603 30159758 30159603 ID=MS.gene94460.t1.exon2;Parent=MS.gene94460.t1
chr5.1 CDS 30159603 30159758 30159603 ID=cds.MS.gene94460.t1;Parent=MS.gene94460.t1
chr5.1 exon 30159850 30159969 30159850 ID=MS.gene94460.t1.exon3;Parent=MS.gene94460.t1
chr5.1 CDS 30159850 30159969 30159850 ID=cds.MS.gene94460.t1;Parent=MS.gene94460.t1
chr5.1 exon 30160867 30160943 30160867 ID=MS.gene94460.t1.exon4;Parent=MS.gene94460.t1
chr5.1 CDS 30160867 30160943 30160867 ID=cds.MS.gene94460.t1;Parent=MS.gene94460.t1
chr5.1 exon 30161047 30161239 30161047 ID=MS.gene94460.t1.exon5;Parent=MS.gene94460.t1
chr5.1 CDS 30161047 30161239 30161047 ID=cds.MS.gene94460.t1;Parent=MS.gene94460.t1
chr5.1 exon 30161574 30161679 30161574 ID=MS.gene94460.t1.exon6;Parent=MS.gene94460.t1
chr5.1 CDS 30161574 30161679 30161574 ID=cds.MS.gene94460.t1;Parent=MS.gene94460.t1
chr5.1 exon 30162115 30162425 30162115 ID=MS.gene94460.t1.exon7;Parent=MS.gene94460.t1
chr5.1 CDS 30162115 30162425 30162115 ID=cds.MS.gene94460.t1;Parent=MS.gene94460.t1
Gene Sequence

>MS.gene94460

ATGTCATCACCAAATTTACATAAGCTCCAAAGACATGATATAGGCGATATGGAAGATATGATTAGTGAATTACCCGAGGCTGTTCTTCTTCATATTCTTTCTTTACTTCCTACTAAAGATACTGTAAGAACTTCCATATTAGCTACAAAGTGGAAATACTTGTGGACACACTTATCCGTCTTTGATTTTCAAGTTTCTTGTAATCCGGATGTATCAAAGCCAGAACAGGAGTCGGAAAATTGCCTCATAGATCAGGTGGACAAACTACTTCACACATCTGACCATGTAGAAAGACTTTGCATTCAAGTACAAAAAGCTGATATTGATGGAGAAAAAGCTAATTCTTTGTTATCTTCGGCATTGATGCACAAACTCCTTGATCTTAAATTTTCCCTAAACCGTACATTTGCTAGGTTTGTGTTACCCAATAATTTCTCAGCATCCCAATCATTGAATAAGTTGTGTTTAGAATTTGGTTTCACTCTATATATACCTGATGGTATACGTTTCCCTAACTTGAAGACTTTATATCTTTCACATCTTTCCTTCGAAAATGAGAAGTCAGCTCAACGGCTTTTGTCTGGGTGCCCTGTCCTACAAGAGTTGACTTTGTATAAATTTATTTGGTTGAACATAGAACAGATCAATGTTGCAATTTCCACACTAAGGAAGTTGACCATCGACTTAAATCATTTTGATCCAAGTGATTTGCGTATTCGCAGTTTTACAATCAAATTTGATGTTGCGAATCTTTTACCTTTAAGCTACGCGGCCCATCCAATTATAAAATTTGTCCTCGTTAACCCTTCCTCCATAGTTGATGCATGTATTGATCTTAGGTGTTACGGTCCCCAAAATCAACAGCAAAATACTACGCAATTTGCAATTGAGCTATTGAGTCGATTAGGTAGTGTCAAATCTCTCACAATATCAAATGATACTCTTCAGGTATGTTTTACTGCTCACTTATGATCTTCATTTTTCTAAATGTTGTATAAGATAATTTATTGACAATGTTGCTTGGGTTATGTGCTTGTTTCCATTGCATATTCTTTATGTATTACAATGATGTATCTGTTTTTGTTTCCCTTACTAGTGTCTTAACTATGCAAAAGACACTCTTCATCTTTTGCCTCCGTTCTTCAATTTGACGCATCTTGATGTGCCCTTGGGGTATTTTTACCCCACCAGTGAAGTATTAGCAGGCATTTTCCACAAGACTCCTATTCTGGAAGTTCTTCACATTTCTACGGTACATCACGTATCTTGCTTCTTCTACCATGTTTCACGGCTAATAGTAAAATTATTTCTGTTCATTGACTTTTTTATTGATTCTTGTGTAGGGATTTTTCTTATTCTTGGATGAAGGATGGGCATCAAATTCATTTCCTTGGTGTTTCACATCTTCTCTCAAAGAATGTTCTATTTCAGATTTTCTTGGAATTGAACCTGATATCGAAGCTGTAAAGTTTTTGTTAGAAAATGCCACAGTCTTAGGGGAGATCAACATATTCTGTTCGGAATTATTATAAAAAGATTTGGAGAAGCTTGCTGATGTCAGGAATCAATTGCAACATTTATGCCAGGGGCGATGTGTCATTAAGTTTCGGTAAATCTTCTTTCCTTTATTTATTTATTTTTGTGAGAATGGATTGAATTTCTCATCTAACTGCATCACCAAACTTAGATTGTGGTTAAATGAAATAACTTCAACTAGTCAGACTACCAATGCCAGTTTATAGAACTTTCACTTTGTGAACGGAATGAGTATATATCATTTGAAATACACATAACAGCAGATAACGTTCTGTAGAGTTAAAATCTTCTAATGATTTACGAAGTTGTAAGAATTATCACCTAGATTGATTGTTCAACAGTTAAGCCTCACTAGAATCAACAATATAAATTTGAATTCCCAAGTTGGCAACAATTTTGTGAAATGTTAAGAAAAAAAACATGTCATTTCTAACGCTCAAGTGTTAAGTCAGCTAGAGGCATTAGGGGAGAAATACAGGAAAGAGATTCTGTAGAGAAATACGGGAAAGAGATTTTGTAGAGTGGAATCTGGGGAGAGGAAGCTTTTCTGTATTGTTCTTCGTGCTGGTGGAAAGATATTGGAGGGGTAGATATGATGGCAAGGGAGCACTGGTTTTACTAGATTTTGGTTAGATGTGTGGACGGGTTTGGTTCCGTTAAGCGAGAGTTTTCACCGGTTGTTTTCTATTTCGGAGCAAAAGAAGGGTACGGTGAGCGAGGTGAGAATGAGGAAAGGTGAGGTTTGGAGGTGGTCGTTCACTTGGCATAGGAGGTTGTTCGAATGGAGAATGAGAATTTTGCAGGTCTTATTGTCTTTACTGCAGGCTGTGCATTTATCCACGGAGGAGGATGTTTGGGTTTGGGGTCCAGATGTGTTTGGTAGTGTTTGTCCACAGAGGAGGTTGTTCGGGTGGCTCTTTTTCGTTTATCATTTATTGGCTCCGGTTTTTCTTAATGAAATCAGTTTGGACACTTCTGATTCTCATGTGTTTCGTACTTGGTAGTATTTGGAATTCTGCTGCACCCTCAAAAGTTGCAGTTTTTTTGTGGAAATTACTGCACAATCGTGTCTTGTCAAAAGACAATATGGCAGTTAGGGTTGTTATCCTAGTGGGGGGTTCGATTGACTATGCAGTTTTTGTGGGGAAGGTGGAAACATCAGTGCTTCTGTTTCTTCACTGCAAGTTTGCAGCAATGGTTTGGTTTAGTGTGTTTCAGTGGTTTTGGTTGTTTCTGGTGTTGCCACCAAATTTTTCTGTCCACTTTGAATGTTCGAGTGGGTCTGCGTGATGTAAGCCGTTAAGGAAAGTGTTTTGGTTAATTTGGCATGCAATGGTATGGTCAATTTGGAACGCAAGAAATGGACTTATTTTCTATTAGATTAGGAAGGATCCCTTGGAGGTGGCGAAAGAAATCAAAGTCTTTTCTTGGAGATGGGGATTGAGCGGGAAGAAATCTTATAATTGCCTCCTTTTCGGATGGTGTTGGGATCCTTGTAAGTGCTTGGAGTGATTTGGGGGTGGGGGTGTAGAAGCTATCAGTTGTTCTTGCGTTTTTTGGCTTCGGTGTTCCTGTGTTTATGGGTAGATGGGGAGTCTTTTTGGTTAGCAGAGGCCTAGTTTTGGTTGAATGTGAAGGTTTTGTGTTGGTGTCAGATATCAGACACGTTCAGAAATGTCGGTACTATAGATATCATAATTGATGCCTTTCTATCATATAATGACGTTGGACATGTATTGGTTGTCAAATACCGACTGCTGTCGAATATGATATAATTGCTATGGTCCTGTTGTACGTTATTTAGTATGAAACATTGTCTAATTATAGCGGTTATTATAGTGCTGCTGAATAAACTATTGTTTCTGCAATCAGCGGTTGATAACCTTAGCTATCGTGGAATATCTTCTGATATAATCTGTCAATTGATCAATTTAATCTCATGAGTAGAATTTTTGCAAAAAGCTTTGGTCCCAGCTTGTTCTGAATTCGATGGACTATTGTTTGTGATTTAATTAGTGTTGTCTTGATGTGTGTGATCTGTTTCTAACATTTTGGTGTTTCAATGTAATCAGATGAAGATCTTTGTGAAAATATTTACAGCAAAGCAATTGGAGAACGGTCGCATGCTTGCGGATTACAACATTCAAACAGAATCCACACTTCATTTGGTGCTTCAATTGAGAGGTGGAATGAAAATTTATGTCAAAACTTTGACAGGAAAGATTATACTCATTACAATATCCAGAAGGAATCTACTTTGCATATGGTTTTGCAGGTTCGTGGTGGTAATGAAAATATATGTGAAGACTCTTACCGGGAAAGTAAGGATTCAATTGATCTACTTTACATTAAAGGTGGAAATTTAAGGATTGAATTGATGTAA

Protein sequence

>MS.gene94460.t1

MSSPNLHKLQRHDIGDMEDMISELPEAVLLHILSLLPTKDTVRTSILATKWKYLWTHLSVFDFQVSCNPDVSKPEQESENCLIDQVDKLLHTSDHVERLCIQVQKADIDGEKANSLLSSALMHKLLDLKFSLNRTFARFVLPNNFSASQSLNKLCLEFGFTLYIPDGIRFPNLKTLYLSHLSFENEKSAQRLLSGCPVLQELTLYKFIWLNIEQINVAISTLRKLTIDLNHFDPSDLRIRSFTIKFDVANLLPLSYAAHPIIKFVLVNPSSIVDACIDLRCYGPQNQQQNTTQFAIELLSRLGSVKSLTISNDTLQCLNYAKDTLHLLPPFFNLTHLDVPLGYFYPTSEVLAGIFHKTPILEVLHISTGFFLFLDEGWASNSFPWCFTSSLKECSISDFLGIEPDIEAAVHLSTEEDVWVWGPDVFGSVCPQRSIWNSAAPSKVAVFLWKLLHNRVLSKDNMAVRVVILVGGSIDYAVFVGKVETSVLLFLHCKFAAMKLSVVLAFFGFGVPVFMGRWGVFLVSRGLVLVECEDEDLCENIYSKAIGERSHACGLQHSNRIHTSFGASIERWNENLCQNFDRKDYTHYNIQKESTLHMVLQVRGGNENICEDSYRESKDSIDLLYIKGGNLRIELM