AlfalfaGEDB | MS.gene041326

M. sativa cultivar XinJiangDaYe / MS.gene041326

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF07723.16 PF08387.13

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041326.t1	RHN45482.1	84.1	408	51	2	35	442	41	434	1.10E-183	652.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041326.t1	Q8GW80	26.5	468	293	13	1	433	12	463	2.4e-27	124.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041326.t1	A0A396GWL0	84.1	408	51	2	35	442	41	434	7.7e-184	652.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene041326	MS.gene47775	PPI
MS.gene041326	MS.gene005794	PPI
MS.gene041326	MS.gene93027	PPI
MS.gene041326	MS.gene053311	PPI
MS.gene041326	MS.gene25299	PPI
MS.gene041326	MS.gene64984	PPI
MS.gene041326	MS.gene07658	PPI
MS.gene055880	MS.gene041326	PPI
MS.gene041326	MS.gene34215	PPI
MS.gene041326	MS.gene47782	PPI
MS.gene041326	MS.gene88183	PPI
MS.gene25410	MS.gene041326	PPI
MS.gene041326	MS.gene36807	PPI
MS.gene63113	MS.gene041326	PPI
MS.gene34707	MS.gene041326	PPI
MS.gene041326	MS.gene32300	PPI
MS.gene041326	MS.gene25448	PPI
MS.gene041326	MS.gene03748	PPI
MS.gene49017	MS.gene041326	PPI
MS.gene041326	MS.gene006736	PPI
MS.gene32587	MS.gene041326	PPI
MS.gene041326	MS.gene36810	PPI
MS.gene041326	MS.gene23706	PPI
MS.gene041326	MS.gene90825	PPI
MS.gene041326	MS.gene25344	PPI
MS.gene023817	MS.gene041326	PPI
MS.gene041326	MS.gene34739	PPI
MS.gene041326	MS.gene34801	PPI
MS.gene041326	MS.gene033899	PPI
MS.gene041326	MS.gene007876	PPI
MS.gene041326	MS.gene39752	PPI
MS.gene041326	MS.gene03755	PPI
MS.gene041326	MS.gene021295	PPI
MS.gene041326	MS.gene34737	PPI
MS.gene041326	MS.gene91886	PPI
MS.gene041326	MS.gene78164	PPI
MS.gene041326	MS.gene25347	PPI
MS.gene041326	MS.gene20330	PPI
MS.gene041326	MS.gene25412	PPI
MS.gene041326	MS.gene03757	PPI
MS.gene041326	MS.gene39754	PPI
MS.gene041326	MS.gene36065	PPI
MS.gene041326	MS.gene07678	PPI
MS.gene041326	MS.gene47772	PPI
MS.gene73831	MS.gene041326	PPI
MS.gene041326	MS.gene059408	PPI
MS.gene041326	MS.gene68082	PPI
MS.gene041326	MS.gene84247	PPI
MS.gene041326	MS.gene53646	PPI
MS.gene041326	MS.gene045452	PPI
MS.gene09364	MS.gene041326	PPI
MS.gene041326	MS.gene031570	PPI
MS.gene041326	MS.gene72958	PPI
MS.gene041326	MS.gene75904	PPI
MS.gene63213	MS.gene041326	PPI
MS.gene09360	MS.gene041326	PPI
MS.gene041326	MS.gene47777	PPI
MS.gene041326	MS.gene63094	PPI
MS.gene041326	MS.gene03760	PPI
MS.gene041326	MS.gene03756	PPI
MS.gene34824	MS.gene041326	PPI
MS.gene041326	MS.gene017193	PPI
MS.gene64993	MS.gene041326	PPI
MS.gene25411	MS.gene041326	PPI
MS.gene72959	MS.gene041326	PPI
MS.gene041326	MS.gene25386	PPI
MS.gene041326	MS.gene63221	PPI
MS.gene96120	MS.gene041326	PPI
MS.gene041326	MS.gene49015	PPI
MS.gene34731	MS.gene041326	PPI
MS.gene041326	MS.gene97346	PPI
MS.gene041326	MS.gene63257	PPI
MS.gene041326	MS.gene69407	PPI
MS.gene041326	MS.gene36942	PPI
MS.gene041326	MS.gene72955	PPI
MS.gene047137	MS.gene041326	PPI
MS.gene041326	MS.gene63111	PPI
MS.gene065516	MS.gene041326	PPI
MS.gene34704	MS.gene041326	PPI
MS.gene041326	MS.gene91885	PPI
MS.gene041326	MS.gene056133	PPI
MS.gene041326	MS.gene34804	PPI
MS.gene041326	MS.gene022920	PPI
MS.gene041326	MS.gene046838	PPI
MS.gene041326	MS.gene061767	PPI
MS.gene041326	MS.gene60523	PPI
MS.gene041326	MS.gene055877	PPI
MS.gene041326	MS.gene63222	PPI
MS.gene041326	MS.gene25352	PPI
MS.gene041326	MS.gene63260	PPI
MS.gene041326	MS.gene007794	PPI
MS.gene041326	MS.gene01653	PPI
MS.gene041326	MS.gene69561	PPI
MS.gene041326	MS.gene34733	PPI
MS.gene041326	MS.gene94458	PPI
MS.gene041326	MS.gene99983	PPI
MS.gene041326	MS.gene045448	PPI
MS.gene041326	MS.gene72960	PPI
MS.gene041326	MS.gene03758	PPI
MS.gene041326	MS.gene39744	PPI
MS.gene041326	MS.gene07674	PPI
MS.gene041326	MS.gene34825	PPI
MS.gene041326	MS.gene89957	PPI
MS.gene041326	MS.gene032853	PPI
MS.gene041326	MS.gene003456	PPI
MS.gene041326	MS.gene07666	PPI
MS.gene041326	MS.gene062537	PPI
MS.gene041326	MS.gene99980	PPI
MS.gene041326	MS.gene36943	PPI
MS.gene041326	MS.gene029093	PPI
MS.gene39745	MS.gene041326	PPI
MS.gene041326	MS.gene010865	PPI
MS.gene75902	MS.gene041326	PPI
MS.gene041326	MS.gene032379	PPI
MS.gene041326	MS.gene005799	PPI
MS.gene041326	MS.gene25298	PPI
MS.gene041326	MS.gene03759	PPI
MS.gene041326	MS.gene043122	PPI
MS.gene041326	MS.gene25353	PPI
MS.gene041326	MS.gene29863	PPI
MS.gene041326	MS.gene48654	PPI
MS.gene041326	MS.gene67920	PPI
MS.gene041326	MS.gene52136	PPI
MS.gene041326	MS.gene89956	PPI
MS.gene041326	MS.gene09996	PPI
MS.gene041326	MS.gene022915	PPI
MS.gene041326	MS.gene067702	PPI
MS.gene041326	MS.gene98324	PPI
MS.gene041326	MS.gene36066	PPI
MS.gene03750	MS.gene041326	PPI
MS.gene041326	MS.gene34740	PPI
MS.gene041326	MS.gene64989	PPI
MS.gene041326	MS.gene36763	PPI
MS.gene041326	MS.gene032861	PPI
MS.gene041326	MS.gene34735	PPI
MS.gene041326	MS.gene23226	PPI
MS.gene041326	MS.gene67919	PPI
MS.gene041326	MS.gene061286	PPI
MS.gene041326	MS.gene92095	PPI
MS.gene041326	MS.gene89955	PPI
MS.gene63210	MS.gene041326	PPI
MS.gene041326	MS.gene022905	PPI
MS.gene041326	MS.gene84248	PPI
MS.gene041326	MS.gene25415	PPI
MS.gene041326	MS.gene024262	PPI
MS.gene041326	MS.gene022912	PPI
MS.gene041326	MS.gene98001	PPI
MS.gene041326	MS.gene49018	PPI
MS.gene041326	MS.gene032862	PPI
MS.gene041326	MS.gene34703	PPI
MS.gene045441	MS.gene041326	PPI
MS.gene041326	MS.gene94460	PPI
MS.gene041326	MS.gene045446	PPI
MS.gene041326	MS.gene09368	PPI
MS.gene041326	MS.gene041323	PPI
MS.gene041326	MS.gene39749	PPI
MS.gene041326	MS.gene062282	PPI
MS.gene006692	MS.gene041326	PPI
MS.gene041326	MS.gene062526	PPI
MS.gene041326	MS.gene64992	PPI
MS.gene041326	MS.gene060770	PPI
MS.gene041326	MS.gene043664	PPI
MS.gene041326	MS.gene30074	PPI
MS.gene041326	MS.gene072003	PPI
MS.gene041326	MS.gene30067	PPI
MS.gene041326	MS.gene63112	PPI
MS.gene36764	MS.gene041326	PPI
MS.gene041326	MS.gene26444	PPI
MS.gene041326	MS.gene63224	PPI
MS.gene041326	MS.gene031603	PPI
MS.gene010958	MS.gene041326	PPI
MS.gene041326	MS.gene53647	PPI
MS.gene041326	MS.gene34736	PPI
MS.gene065234	MS.gene041326	PPI
MS.gene041326	MS.gene51793	PPI
MS.gene041326	MS.gene25414	PPI
MS.gene79176	MS.gene041326	PPI
MS.gene47780	MS.gene041326	PPI
MS.gene041326	MS.gene47781	PPI
MS.gene34753	MS.gene041326	PPI
MS.gene041326	MS.gene054411	PPI
MS.gene041326	MS.gene031572	PPI
MS.gene041326	MS.gene01651	PPI
MS.gene041326	MS.gene050239	PPI
MS.gene041326	MS.gene73780	PPI
MS.gene041326	MS.gene043123	PPI
MS.gene041326	MS.gene72954	PPI
MS.gene041326	MS.gene34730	PPI
MS.gene041326	MS.gene066439	PPI
MS.gene041326	MS.gene99982	PPI
MS.gene041326	MS.gene25418	PPI
MS.gene041326	MS.gene005795	PPI
MS.gene041326	MS.gene032852	PPI
MS.gene041326	MS.gene072244	PPI
MS.gene041326	MS.gene032296	PPI
MS.gene041326	MS.gene033694	PPI
MS.gene041326	MS.gene032860	PPI
MS.gene041326	MS.gene045772	PPI
MS.gene041326	MS.gene061531	PPI
MS.gene041326	MS.gene065373	PPI
MS.gene041326	MS.gene045440	PPI
MS.gene041326	MS.gene89963	PPI
MS.gene022909	MS.gene041326	PPI
MS.gene041326	MS.gene27665	PPI
MS.gene041326	MS.gene031573	PPI
MS.gene041326	MS.gene63104	PPI
MS.gene072946	MS.gene041326	PPI
MS.gene041326	MS.gene006723	PPI
MS.gene041326	MS.gene54960	PPI
MS.gene36804	MS.gene041326	PPI
MS.gene041326	MS.gene49011	PPI
MS.gene041326	MS.gene028696	PPI
MS.gene041326	MS.gene25449	PPI
MS.gene041326	MS.gene25296	PPI
MS.gene041326	MS.gene050947	PPI
MS.gene041326	MS.gene62747	PPI
MS.gene03752	MS.gene041326	PPI
MS.gene041326	MS.gene25297	PPI
MS.gene041326	MS.gene25451	PPI
MS.gene041326	MS.gene72962	PPI
MS.gene041326	MS.gene07660	PPI
MS.gene041326	MS.gene09370	PPI
MS.gene041326	MS.gene03749	PPI
MS.gene78146	MS.gene041326	PPI
MS.gene041326	MS.gene67957	PPI
MS.gene041326	MS.gene006725	PPI
MS.gene041326	MS.gene94457	PPI
MS.gene041326	MS.gene95902	PPI
MS.gene041326	MS.gene049943	PPI
MS.gene041326	MS.gene069762	PPI
MS.gene49513	MS.gene041326	PPI
MS.gene69850	MS.gene041326	PPI
MS.gene041326	MS.gene073176	PPI
MS.gene041326	MS.gene72952	PPI
MS.gene041326	MS.gene045439	PPI
MS.gene041326	MS.gene51795	PPI
MS.gene041326	MS.gene63256	PPI
MS.gene041326	MS.gene98323	PPI
MS.gene041326	MS.gene72957	PPI
MS.gene041326	MS.gene050744	PPI
MS.gene041326	MS.gene032295	PPI
MS.gene041326	MS.gene34766	PPI
MS.gene041326	MS.gene055882	PPI
MS.gene041326	MS.gene07664	PPI
MS.gene041326	MS.gene89076	PPI
MS.gene041326	MS.gene23197	PPI
MS.gene041326	MS.gene074346	PPI
MS.gene041326	MS.gene060769	PPI
MS.gene041326	MS.gene29873	PPI
MS.gene63217	MS.gene041326	PPI
MS.gene041326	MS.gene064211	PPI
MS.gene041326	MS.gene059409	PPI
MS.gene041326	MS.gene007875	PPI
MS.gene041326	MS.gene39747	PPI
MS.gene96357	MS.gene041326	PPI
MS.gene26058	MS.gene041326	PPI
MS.gene041326	MS.gene022919	PPI
MS.gene68082	MS.gene041326	PPI
MS.gene041326	MS.gene72956	PPI
MS.gene041326	MS.gene09363	PPI
MS.gene041326	MS.gene03753	PPI
MS.gene041326	MS.gene003455	PPI
MS.gene041326	MS.gene61631	PPI
MS.gene041326	MS.gene63212	PPI
MS.gene041326	MS.gene47771	PPI
MS.gene86337	MS.gene041326	PPI
MS.gene041326	MS.gene043687	PPI
MS.gene041326	MS.gene053514	PPI
MS.gene041326	MS.gene72961	PPI
MS.gene041326	MS.gene072231	PPI
MS.gene041326	MS.gene39753	PPI
MS.gene63177	MS.gene041326	PPI
MS.gene041326	MS.gene002093	PPI
MS.gene041326	MS.gene010060	PPI
MS.gene041326	MS.gene002112	PPI
MS.gene041326	MS.gene047136	PPI
MS.gene041326	MS.gene040413	PPI
MS.gene041326	MS.gene09997	PPI
MS.gene041326	MS.gene47783	PPI
MS.gene041326	MS.gene047153	PPI
MS.gene041326	MS.gene75903	PPI
MS.gene041326	MS.gene63105	PPI
MS.gene041326	MS.gene006728	PPI
MS.gene041326	MS.gene91884	PPI
MS.gene041326	MS.gene49013	PPI
MS.gene041326	MS.gene36752	PPI
MS.gene39749	MS.gene041326	PPI
MS.gene043700	MS.gene041326	PPI
MS.gene21278	MS.gene041326	PPI
MS.gene041326	MS.gene022917	PPI
MS.gene041326	MS.gene72963	PPI
MS.gene041326	MS.gene36743	PPI
MS.gene041326	MS.gene63259	PPI
MS.gene041326	MS.gene98598	PPI
MS.gene041326	MS.gene072000	PPI
MS.gene041326	MS.gene60525	PPI
MS.gene25396	MS.gene041326	PPI
MS.gene041326	MS.gene60521	PPI
MS.gene041326	MS.gene002111	PPI
MS.gene30260	MS.gene041326	PPI
MS.gene041326	MS.gene81090	PPI
MS.gene041326	MS.gene07669	PPI
MS.gene041326	MS.gene89961	PPI
MS.gene041326	MS.gene20329	PPI
MS.gene041326	MS.gene033695	PPI
MS.gene041326	MS.gene045451	PPI
MS.gene041326	MS.gene63218	PPI
MS.gene09362	MS.gene041326	PPI
MS.gene041326	MS.gene91201	PPI
MS.gene041326	MS.gene005798	PPI
MS.gene041326	MS.gene053312	PPI
MS.gene041326	MS.gene34802	PPI
MS.gene041326	MS.gene006730	PPI
MS.gene041326	MS.gene056517	PPI
MS.gene041326	MS.gene033897	PPI
MS.gene041326	MS.gene25348	PPI
MS.gene041326	MS.gene041325	PPI
MS.gene041326	MS.gene031575	PPI
MS.gene041326	MS.gene54959	PPI
MS.gene041326	MS.gene047839	PPI
MS.gene041326	MS.gene43257	PPI
MS.gene041326	MS.gene006727	PPI
MS.gene041326	MS.gene34706	PPI
MS.gene041326	MS.gene060771	PPI
MS.gene96923	MS.gene041326	PPI
MS.gene041326	MS.gene66626	PPI
MS.gene041326	MS.gene09371	PPI
MS.gene041326	MS.gene21682	PPI
MS.gene041326	MS.gene053313	PPI
MS.gene041326	MS.gene07665	PPI
MS.gene055883	MS.gene041326	PPI
MS.gene072547	MS.gene041326	PPI
MS.gene041326	MS.gene63185	PPI
MS.gene041326	MS.gene95710	PPI
MS.gene041326	MS.gene25450	PPI
MS.gene041326	MS.gene34216	PPI
MS.gene041326	MS.gene63214	PPI
MS.gene041326	MS.gene07668	PPI
MS.gene041326	MS.gene29498	PPI
MS.gene041326	MS.gene22129	PPI
MS.gene041326	MS.gene09367	PPI
MS.gene041326	MS.gene045449	PPI
MS.gene041326	MS.gene055754	PPI
MS.gene34738	MS.gene041326	PPI
MS.gene041326	MS.gene63095	PPI
MS.gene041326	MS.gene046839	PPI
MS.gene041326	MS.gene010934	PPI
MS.gene041326	MS.gene022921	PPI
MS.gene041326	MS.gene50153	PPI
MS.gene041326	MS.gene64988	PPI
MS.gene041326	MS.gene30431	PPI
MS.gene041326	MS.gene07659	PPI
MS.gene041326	MS.gene49012	PPI
MS.gene041326	MS.gene038427	PPI
MS.gene041326	MS.gene63223	PPI
MS.gene041326	MS.gene071257	PPI
MS.gene041326	MS.gene035630	PPI
MS.gene041326	MS.gene013991	PPI
MS.gene041326	MS.gene36067	PPI
MS.gene041326	MS.gene031577	PPI
MS.gene041326	MS.gene36809	PPI
MS.gene041326	MS.gene045437	PPI
MS.gene041326	MS.gene069763	PPI
MS.gene041326	MS.gene48656	PPI
MS.gene041326	MS.gene07667	PPI
MS.gene022916	MS.gene041326	PPI
MS.gene041326	MS.gene09992	PPI
MS.gene041326	MS.gene97999	PPI
MS.gene32305	MS.gene041326	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041326.t1	MTR_5g039950	78.959	442	44	3	1	442	28	420	0.0	667
MS.gene041326.t1	MTR_7g039630	78.063	351	41	1	1	351	28	342	0.0	528
MS.gene041326.t1	MTR_4g080787	47.124	452	216	7	1	441	24	463	1.08e-122	366
MS.gene041326.t1	MTR_4g080773	46.275	443	218	6	1	432	24	457	1.62e-114	345
MS.gene041326.t1	MTR_4g080773	46.275	443	218	6	1	432	24	457	1.67e-114	345
MS.gene041326.t1	MTR_4g080590	47.500	440	212	7	1	439	28	449	5.93e-113	340
MS.gene041326.t1	MTR_3g048290	44.843	446	232	6	1	441	28	464	2.34e-110	334
MS.gene041326.t1	MTR_2g094750	50.538	372	156	9	1	349	95	461	4.30e-96	297
MS.gene041326.t1	MTR_4g130200	41.176	442	184	6	1	441	25	391	5.89e-94	289
MS.gene041326.t1	MTR_4g080590	49.138	348	161	6	1	347	28	360	1.63e-89	277
MS.gene041326.t1	MTR_7g023310	42.431	436	228	8	1	432	31	447	3.69e-89	278
MS.gene041326.t1	MTR_5g039970	49.175	303	141	5	1	298	24	318	4.78e-76	241
MS.gene041326.t1	MTR_7g023330	36.574	432	196	10	5	432	29	386	1.03e-68	224
MS.gene041326.t1	MTR_4g080807	38.482	369	184	7	68	436	1	326	1.39e-65	216
MS.gene041326.t1	MTR_4g081030	37.883	359	193	8	1	352	22	357	2.47e-52	181
MS.gene041326.t1	MTR_1g082260	47.273	165	86	1	40	203	11	175	1.36e-35	130
MS.gene041326.t1	MTR_2g094450	44.253	174	80	5	176	348	31	188	8.60e-33	123
MS.gene041326.t1	MTR_8g467800	28.571	462	271	18	1	437	25	452	2.32e-26	111
MS.gene041326.t1	MTR_5g005690	25.612	449	290	9	1	417	26	462	6.30e-22	98.6
MS.gene041326.t1	MTR_7g094030	24.944	449	278	15	1	422	33	449	1.78e-19	90.9
MS.gene041326.t1	MTR_5g084070	26.932	427	267	13	5	425	22	409	1.00e-18	88.6
MS.gene041326.t1	MTR_2g072530	24.279	416	277	13	5	407	22	412	1.91e-17	84.7
MS.gene041326.t1	MTR_2g072730	25.503	447	280	19	1	422	21	439	4.90e-17	83.6
MS.gene041326.t1	MTR_3g019240	29.338	317	185	13	1	303	31	322	5.81e-17	82.8
MS.gene041326.t1	MTR_5g092960	27.045	440	281	17	1	421	24	442	1.72e-16	81.6
MS.gene041326.t1	MTR_8g062270	28.074	431	250	19	5	406	25	424	1.01e-15	79.3
MS.gene041326.t1	MTR_2g083840	26.339	448	275	19	1	426	26	440	2.31e-15	78.2
MS.gene041326.t1	MTR_5g080710	24.155	414	283	10	1	410	38	424	3.64e-15	77.8
MS.gene041326.t1	MTR_1g038710	26.157	432	265	16	1	406	24	427	4.55e-15	77.4
MS.gene041326.t1	MTR_4g045900	24.468	470	271	20	1	406	31	480	5.28e-15	77.4
MS.gene041326.t1	MTR_4g080813	53.226	62	28	1	1	61	24	85	8.57e-15	70.5
MS.gene041326.t1	MTR_0049s0110	22.803	421	263	13	1	406	13	386	1.35e-14	75.9
MS.gene041326.t1	MTR_1g090883	28.889	360	216	14	1	347	24	356	3.92e-14	73.9
MS.gene041326.t1	MTR_8g467800	29.180	305	187	13	1	296	25	309	4.06e-14	73.6
MS.gene041326.t1	MTR_0049s0110	23.932	351	220	10	1	347	13	320	6.67e-14	72.8
MS.gene041326.t1	MTR_0049s0110	23.932	351	220	10	1	347	13	320	7.08e-14	72.8
MS.gene041326.t1	MTR_8g468840	25.113	442	286	17	1	422	19	435	1.22e-13	72.8
MS.gene041326.t1	MTR_1g115250	25.604	414	269	15	1	409	37	416	1.77e-13	72.4
MS.gene041326.t1	MTR_3g448340	25.057	439	275	18	1	407	11	427	2.71e-13	72.0
MS.gene041326.t1	MTR_4g050930	26.582	316	197	11	1	305	34	325	4.38e-13	70.9
MS.gene041326.t1	MTR_2g082850	28.375	363	214	12	1	343	27	363	5.94e-13	70.5
MS.gene041326.t1	MTR_4g050930	26.582	316	197	11	1	305	34	325	6.48e-13	70.9
MS.gene041326.t1	MTR_8g445780	26.961	408	239	17	1	388	18	386	8.33e-13	70.1
MS.gene041326.t1	MTR_3g023270	27.147	361	210	14	1	344	17	341	8.54e-13	69.7
MS.gene041326.t1	MTR_5g092960	26.891	357	234	13	1	345	24	365	1.12e-12	69.7
MS.gene041326.t1	MTR_4g056030	26.362	459	265	18	3	431	17	432	1.41e-12	69.7
MS.gene041326.t1	MTR_3g099900	27.381	336	198	10	3	321	25	331	1.61e-12	69.3
MS.gene041326.t1	MTR_4g092430	25.074	339	205	12	1	319	48	357	4.35e-12	68.2
MS.gene041326.t1	MTR_1g038760	25.824	364	225	12	1	350	20	352	5.81e-12	67.4
MS.gene041326.t1	MTR_3g108560	24.074	432	214	17	1	412	25	362	6.72e-12	67.4
MS.gene041326.t1	MTR_6g088700	26.149	348	220	13	1	334	19	343	9.16e-12	67.0
MS.gene041326.t1	MTR_0049s0110	26.977	215	137	8	1	210	13	212	1.33e-11	65.5
MS.gene041326.t1	MTR_4g092430	24.458	323	196	11	1	304	48	341	2.09e-11	66.2
MS.gene041326.t1	MTR_8g058965	23.457	486	279	17	1	442	18	454	3.85e-11	65.1
MS.gene041326.t1	MTR_2g072720	24.717	441	290	17	1	422	44	461	5.29e-11	64.7
MS.gene041326.t1	MTR_2g102420	43.056	72	40	1	278	349	18	88	7.59e-11	58.9
MS.gene041326.t1	MTR_3g019200	27.273	308	197	9	1	300	13	301	7.81e-11	63.9
MS.gene041326.t1	MTR_5g073420	28.191	188	122	5	1	183	16	195	9.27e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041326.t1	AT3G59210	27.176	471	286	16	1	433	12	463	1.50e-31	126
MS.gene041326.t1	AT3G59210	27.176	471	286	16	1	433	12	463	1.50e-31	126
MS.gene041326.t1	AT3G59210	27.176	471	286	16	1	433	12	463	1.50e-31	126
MS.gene041326.t1	AT3G59210	27.176	471	286	16	1	433	12	463	1.50e-31	126
MS.gene041326.t1	AT3G59210	27.176	471	286	16	1	433	12	463	1.50e-31	126
MS.gene041326.t1	AT4G14096	28.947	456	268	18	1	432	13	436	1.40e-26	112
MS.gene041326.t1	AT4G14096	28.947	456	268	18	1	432	13	436	1.40e-26	112
MS.gene041326.t1	AT3G58860	26.777	422	268	14	1	406	12	408	5.17e-25	107
MS.gene041326.t1	AT5G22660	25.416	421	275	13	1	406	18	414	8.77e-25	106
MS.gene041326.t1	AT4G22280	29.227	414	250	14	3	410	10	386	9.08e-25	106
MS.gene041326.t1	AT3G59230	27.158	475	274	20	1	432	17	462	2.27e-24	105
MS.gene041326.t1	AT1G51370	26.730	419	258	16	1	407	24	405	1.01e-23	103
MS.gene041326.t1	AT1G16930	27.041	392	240	16	1	376	20	381	1.57e-23	102
MS.gene041326.t1	AT1G16930	27.041	392	240	16	1	376	20	381	1.57e-23	102
MS.gene041326.t1	AT1G16930	27.041	392	240	16	1	376	20	381	1.57e-23	102
MS.gene041326.t1	AT3G58900	27.500	440	262	16	1	406	7	423	1.33e-22	100
MS.gene041326.t1	AT5G53840	28.058	417	272	12	1	414	23	414	1.45e-22	100
MS.gene041326.t1	AT3G58880	28.474	439	252	15	1	406	8	417	1.63e-22	100
MS.gene041326.t1	AT4G14103	28.297	364	218	14	1	345	13	352	2.39e-22	98.6
MS.gene041326.t1	AT4G14103	28.297	364	218	14	1	345	13	352	2.39e-22	98.6
MS.gene041326.t1	AT4G22280	31.054	351	206	13	3	347	10	330	3.37e-22	97.4
MS.gene041326.t1	AT4G13985	27.232	448	281	15	1	429	24	445	3.44e-22	99.0
MS.gene041326.t1	AT5G44950	23.543	429	277	16	1	408	9	407	3.74e-22	98.6
MS.gene041326.t1	AT4G14103	28.297	364	218	14	1	345	13	352	4.55e-22	98.6
MS.gene041326.t1	AT3G59200	27.660	376	215	14	1	345	12	361	4.79e-22	97.4
MS.gene041326.t1	AT1G51370	27.711	415	248	16	1	400	24	401	5.39e-22	97.8
MS.gene041326.t1	AT3G59200	26.395	466	269	17	1	422	12	447	8.27e-22	98.2
MS.gene041326.t1	AT3G58960	28.188	447	255	19	5	406	11	436	2.45e-21	96.7
MS.gene041326.t1	AT5G56420	28.691	359	203	14	1	347	11	328	3.63e-21	95.5
MS.gene041326.t1	AT5G56420	28.691	359	203	14	1	347	11	328	3.63e-21	95.5
MS.gene041326.t1	AT5G56420	28.691	359	203	14	1	347	11	328	3.63e-21	95.5
MS.gene041326.t1	AT5G22730	24.235	425	276	13	1	404	33	432	5.27e-21	95.5
MS.gene041326.t1	AT5G22730	24.235	425	276	13	1	404	33	432	5.27e-21	95.5
MS.gene041326.t1	AT5G53635	25.694	432	272	15	1	411	5	408	6.62e-21	94.7
MS.gene041326.t1	AT5G22720	25.587	426	272	15	1	404	28	430	6.77e-21	95.1
MS.gene041326.t1	AT1G58310	27.676	383	218	14	1	345	13	374	1.40e-20	94.4
MS.gene041326.t1	AT3G59170	25.945	397	220	17	1	345	12	386	1.47e-20	94.4
MS.gene041326.t1	AT5G44980	24.292	424	280	14	1	409	9	406	2.30e-20	93.2
MS.gene041326.t1	AT5G44980	24.292	424	280	14	1	409	9	406	2.30e-20	93.2
MS.gene041326.t1	AT1G66300	22.803	421	283	11	1	406	34	427	2.51e-20	93.6
MS.gene041326.t1	AT2G26030	25.124	402	250	14	1	380	9	381	2.77e-20	93.2
MS.gene041326.t1	AT2G26030	25.124	402	250	14	1	380	9	381	2.77e-20	93.2
MS.gene041326.t1	AT4G27050	24.545	440	274	16	1	407	9	423	3.25e-20	93.2
MS.gene041326.t1	AT4G27050	24.545	440	274	16	1	407	9	423	3.25e-20	93.2
MS.gene041326.t1	AT4G27050	24.545	440	274	16	1	407	9	423	3.25e-20	93.2
MS.gene041326.t1	AT4G27050	24.545	440	274	16	1	407	9	423	3.25e-20	93.2
MS.gene041326.t1	AT4G27050	24.545	440	274	16	1	407	9	423	3.25e-20	93.2
MS.gene041326.t1	AT3G59160	25.773	388	229	14	1	345	18	389	3.55e-20	93.2
MS.gene041326.t1	AT2G42730	25.173	433	273	13	1	406	10	418	4.90e-20	92.4
MS.gene041326.t1	AT5G25860	25.745	470	281	20	1	441	17	447	5.86e-20	92.4
MS.gene041326.t1	AT3G58900	29.412	323	198	12	1	308	7	314	8.04e-20	90.1
MS.gene041326.t1	AT2G26030	25.183	409	246	15	1	380	9	386	8.66e-20	91.7
MS.gene041326.t1	AT5G22670	26.107	429	266	16	1	409	16	413	1.02e-19	91.7
MS.gene041326.t1	AT2G29930	26.147	436	263	17	1	407	17	422	1.36e-19	91.3
MS.gene041326.t1	AT2G29930	26.147	436	263	17	1	407	17	422	1.36e-19	91.3
MS.gene041326.t1	AT5G22700	24.594	431	290	13	1	419	11	418	1.75e-19	90.9
MS.gene041326.t1	AT5G22700	24.594	431	290	13	1	419	11	418	1.75e-19	90.9
MS.gene041326.t1	AT5G22700	24.594	431	290	13	1	419	11	418	1.75e-19	90.9
MS.gene041326.t1	AT5G22700	24.594	431	290	13	1	419	11	418	1.75e-19	90.9
MS.gene041326.t1	AT3G58900	28.221	326	194	12	1	301	7	317	2.45e-19	89.0
MS.gene041326.t1	AT3G58900	28.221	326	194	12	1	301	7	317	2.45e-19	89.0
MS.gene041326.t1	AT1G80470	25.575	391	248	15	1	378	20	380	2.54e-19	90.5
MS.gene041326.t1	AT3G03030	24.943	441	276	15	1	406	7	427	2.54e-19	90.5
MS.gene041326.t1	AT5G22700	24.594	431	290	13	1	419	48	455	2.59e-19	90.5
MS.gene041326.t1	AT3G26922	29.545	264	161	7	1	258	19	263	6.10e-19	87.4
MS.gene041326.t1	AT3G26922	29.545	264	161	7	1	258	19	263	6.10e-19	87.4
MS.gene041326.t1	AT5G38396	24.888	446	273	15	1	410	7	426	6.17e-19	89.4
MS.gene041326.t1	AT1G66290	24.819	415	278	11	1	407	34	422	7.77e-19	89.0
MS.gene041326.t1	AT1G78750	24.176	455	295	15	1	434	23	448	1.01e-18	88.6
MS.gene041326.t1	AT1G78750	24.176	455	295	15	1	434	23	448	1.01e-18	88.6
MS.gene041326.t1	AT3G50710	24.944	449	286	12	1	435	7	418	3.29e-18	87.0
MS.gene041326.t1	AT1G06630	25.877	456	249	15	1	437	17	402	3.83e-18	87.0
MS.gene041326.t1	AT5G22660	25.081	307	203	7	1	296	18	308	4.28e-18	85.1
MS.gene041326.t1	AT3G59190	25.956	366	235	12	1	345	17	367	7.92e-18	85.5
MS.gene041326.t1	AT1G51370	26.912	353	218	13	1	349	24	340	1.07e-17	84.3
MS.gene041326.t1	AT1G06630	27.322	366	216	13	1	347	17	351	1.12e-17	84.7
MS.gene041326.t1	AT1G06630	27.322	366	216	13	1	347	17	351	1.12e-17	84.7
MS.gene041326.t1	AT1G06630	27.322	366	216	13	1	347	26	360	1.25e-17	85.1
MS.gene041326.t1	AT5G27750	21.978	455	319	11	1	430	10	453	1.26e-17	85.1
MS.gene041326.t1	AT3G59240	23.937	447	288	16	1	417	13	437	1.38e-17	85.5
MS.gene041326.t1	AT1G78760	23.333	420	279	14	1	406	21	411	1.52e-17	85.1
MS.gene041326.t1	AT1G06630	27.322	366	216	13	1	347	17	351	1.70e-17	84.3
MS.gene041326.t1	AT1G06630	27.322	366	216	13	1	347	17	351	1.70e-17	84.3
MS.gene041326.t1	AT1G06630	27.322	366	216	13	1	347	17	351	1.70e-17	84.3
MS.gene041326.t1	AT1G06630	27.322	366	216	13	1	347	17	351	1.70e-17	84.3
MS.gene041326.t1	AT3G59190	25.956	366	235	12	1	345	17	367	1.72e-17	85.1
MS.gene041326.t1	AT3G59000	27.376	442	261	17	1	406	7	424	1.88e-17	85.1
MS.gene041326.t1	AT1G32375	23.430	414	281	11	1	407	7	391	2.31e-17	84.3
MS.gene041326.t1	AT1G32375	23.430	414	281	11	1	407	7	391	2.31e-17	84.3
MS.gene041326.t1	AT4G00160	25.885	452	291	15	1	441	21	439	2.40e-17	84.3
MS.gene041326.t1	AT1G78730	22.449	441	260	14	1	422	27	404	3.18e-17	84.0
MS.gene041326.t1	AT1G69630	24.766	428	269	15	1	406	23	419	4.26e-17	83.6
MS.gene041326.t1	AT4G13965	29.310	232	148	3	1	232	15	230	4.74e-17	83.2
MS.gene041326.t1	AT1G78840	25.829	422	272	16	1	408	11	405	5.54e-17	83.2
MS.gene041326.t1	AT1G78840	25.829	422	272	16	1	408	11	405	5.54e-17	83.2
MS.gene041326.t1	AT1G55030	25.882	425	263	14	1	414	24	407	2.04e-16	81.3
MS.gene041326.t1	AT5G41840	26.542	373	237	15	1	345	19	382	2.27e-16	81.6
MS.gene041326.t1	AT4G13960	25.858	437	265	17	1	406	7	415	2.98e-16	81.3
MS.gene041326.t1	AT4G13960	25.858	437	265	17	1	406	7	415	2.98e-16	81.3
MS.gene041326.t1	AT1G55030	25.882	425	263	14	1	414	14	397	3.06e-16	80.9
MS.gene041326.t1	AT4G00320	26.243	362	241	12	1	345	18	370	3.40e-16	81.3
MS.gene041326.t1	AT3G52680	25.682	440	287	11	1	432	26	433	3.43e-16	80.9
MS.gene041326.t1	AT3G03040	23.982	442	274	14	1	406	7	422	3.57e-16	80.9
MS.gene041326.t1	AT3G26922	28.854	253	155	7	12	258	1	234	3.81e-16	79.0
MS.gene041326.t1	AT3G26922	28.854	253	155	7	12	258	1	234	3.81e-16	79.0
MS.gene041326.t1	AT3G28410	24.729	461	281	18	1	435	33	453	3.85e-16	80.9
MS.gene041326.t1	AT5G38590	25.333	450	267	16	1	432	7	405	4.28e-16	80.5
MS.gene041326.t1	AT5G56390	25.495	404	258	11	14	406	21	392	5.00e-16	80.1
MS.gene041326.t1	AT1G66310	25.701	428	262	16	1	408	24	415	7.31e-16	79.7
MS.gene041326.t1	AT1G60400	24.545	330	211	10	1	317	19	323	8.22e-16	79.3
MS.gene041326.t1	AT3G59180	29.412	187	112	4	169	345	147	323	8.96e-16	79.7
MS.gene041326.t1	AT2G26860	25.592	422	268	12	1	407	7	397	1.16e-15	79.0
MS.gene041326.t1	AT2G26860	25.592	422	268	12	1	407	7	397	1.16e-15	79.0
MS.gene041326.t1	AT2G42720	26.697	442	252	18	1	406	7	412	1.18e-15	79.3
MS.gene041326.t1	AT3G03030	26.646	319	202	10	1	296	7	316	1.61e-15	77.8
MS.gene041326.t1	AT1G66320	22.717	427	282	12	1	410	35	430	1.76e-15	78.6
MS.gene041326.t1	AT3G59250	24.664	446	266	19	1	427	12	406	1.77e-15	78.6
MS.gene041326.t1	AT1G52650	22.899	476	290	16	1	429	7	452	2.48e-15	78.2
MS.gene041326.t1	AT5G38390	25.114	438	262	21	1	406	7	410	3.13e-15	77.8
MS.gene041326.t1	AT3G44810	25.522	431	287	17	1	415	12	424	3.20e-15	77.8
MS.gene041326.t1	AT3G52680	30.268	261	165	6	1	259	26	271	3.25e-15	77.4
MS.gene041326.t1	AT4G09920	29.741	232	148	7	1	230	7	225	4.23e-15	75.9
MS.gene041326.t1	AT4G09920	29.741	232	148	7	1	230	7	225	4.23e-15	75.9
MS.gene041326.t1	AT4G09920	29.741	232	148	7	1	230	7	225	4.23e-15	75.9
MS.gene041326.t1	AT5G18770	25.843	356	229	10	1	343	29	362	5.38e-15	76.6
MS.gene041326.t1	AT3G58930	23.318	446	283	16	1	406	7	433	5.46e-15	77.4
MS.gene041326.t1	AT3G58930	23.318	446	283	16	1	406	7	433	5.46e-15	77.4
MS.gene041326.t1	AT3G58930	23.318	446	283	16	1	406	7	433	5.46e-15	77.4
MS.gene041326.t1	AT4G10400	28.137	263	178	6	1	259	7	262	5.57e-15	77.0
MS.gene041326.t1	AT4G10400	28.137	263	178	6	1	259	7	262	5.57e-15	77.0
MS.gene041326.t1	AT4G10400	28.137	263	178	6	1	259	7	262	5.57e-15	77.0
MS.gene041326.t1	AT4G09920	29.741	232	148	7	1	230	7	225	6.87e-15	75.9
MS.gene041326.t1	AT4G09920	29.741	232	148	7	1	230	7	225	6.87e-15	75.9
MS.gene041326.t1	AT5G41830	24.880	418	267	14	1	382	18	424	7.22e-15	77.0
MS.gene041326.t1	AT2G04230	24.601	439	296	13	1	429	18	431	9.87e-15	76.3
MS.gene041326.t1	AT5G18770	25.843	356	229	10	1	343	29	362	1.08e-14	76.3
MS.gene041326.t1	AT3G58920	24.229	454	274	14	1	407	7	437	1.23e-14	76.3
MS.gene041326.t1	AT3G44060	23.529	425	288	14	1	414	4	402	1.76e-14	75.5
MS.gene041326.t1	AT4G00315	29.630	216	145	3	1	214	7	217	1.86e-14	75.5
MS.gene041326.t1	AT3G26922	27.481	262	144	5	1	258	19	238	1.86e-14	73.9
MS.gene041326.t1	AT3G58940	23.077	429	274	17	1	406	7	402	2.09e-14	75.9
MS.gene041326.t1	AT3G58940	23.077	429	274	17	1	406	7	402	2.09e-14	75.9
MS.gene041326.t1	AT5G02700	24.711	433	259	16	1	410	32	420	2.95e-14	75.1
MS.gene041326.t1	AT1G55660	30.380	237	146	7	1	232	58	280	3.20e-14	74.3
MS.gene041326.t1	AT1G13780	23.542	463	295	18	1	430	15	451	3.97e-14	74.7
MS.gene041326.t1	AT5G38590	30.374	214	130	4	1	209	7	206	6.40e-14	72.4
MS.gene041326.t1	AT1G55660	30.380	237	146	7	1	232	58	280	6.80e-14	73.9
MS.gene041326.t1	AT5G56820	24.204	314	199	10	1	306	20	302	9.65e-14	73.2
MS.gene041326.t1	AT3G62440	24.554	448	267	19	1	406	7	425	1.14e-13	73.2
MS.gene041326.t1	AT5G35995	26.281	449	257	19	1	407	10	426	1.75e-13	72.4
MS.gene041326.t1	AT5G35995	26.281	449	257	19	1	407	10	426	1.75e-13	72.4
MS.gene041326.t1	AT3G42770	25.995	427	273	15	1	414	4	400	2.21e-13	72.4
MS.gene041326.t1	AT5G60610	25.298	419	263	12	1	407	7	387	2.37e-13	71.6
MS.gene041326.t1	AT5G60610	25.298	419	263	12	1	407	7	387	2.37e-13	71.6
MS.gene041326.t1	AT1G48400	22.294	462	284	16	1	407	15	456	2.92e-13	72.0
MS.gene041326.t1	AT5G38570	26.196	397	196	15	1	383	7	320	3.68e-13	71.2
MS.gene041326.t1	AT5G15620	24.885	434	280	17	1	414	7	414	4.80e-13	71.2
MS.gene041326.t1	AT5G44980	24.918	305	195	10	1	290	9	294	5.24e-13	70.1
MS.gene041326.t1	AT5G44980	24.918	305	195	10	1	290	9	294	5.24e-13	70.1
MS.gene041326.t1	AT5G56440	25.641	429	258	18	1	406	7	397	1.10e-12	70.1
MS.gene041326.t1	AT5G56810	28.870	239	146	9	1	232	20	241	1.12e-12	68.9
MS.gene041326.t1	AT5G56410	26.250	400	236	15	3	374	10	378	1.35e-12	70.1
MS.gene041326.t1	AT3G49020	24.675	462	261	16	1	431	27	432	1.77e-12	69.3
MS.gene041326.t1	AT5G18780	23.451	452	287	16	1	431	16	429	2.30e-12	68.9
MS.gene041326.t1	AT5G18780	23.451	452	287	16	1	431	16	429	2.30e-12	68.9
MS.gene041326.t1	AT5G56810	28.870	239	146	9	1	232	20	241	3.46e-12	68.6
MS.gene041326.t1	AT5G22700	22.588	425	265	11	1	419	48	414	5.01e-12	67.8
MS.gene041326.t1	AT5G56800	25.000	256	168	7	151	402	76	311	9.07e-12	66.6
MS.gene041326.t1	AT3G49040	27.673	318	185	13	3	308	24	308	1.03e-11	66.2
MS.gene041326.t1	AT5G02910	26.411	443	270	17	1	419	16	426	1.05e-11	67.0
MS.gene041326.t1	AT5G22730	23.450	371	238	13	1	350	33	378	1.24e-11	66.6
MS.gene041326.t1	AT5G27750	21.131	336	238	8	1	317	10	337	1.49e-11	66.2
MS.gene041326.t1	AT5G44960	21.140	421	268	17	1	404	10	383	1.96e-11	65.9
MS.gene041326.t1	AT1G60410	24.289	387	259	14	1	378	15	376	1.96e-11	65.9
MS.gene041326.t1	AT5G22610	25.000	408	254	18	1	380	23	406	2.60e-11	65.9
MS.gene041326.t1	AT1G06630	25.879	313	184	12	1	294	17	300	2.80e-11	64.7
MS.gene041326.t1	AT5G02910	26.557	305	196	9	1	302	16	295	2.85e-11	65.1
MS.gene041326.t1	AT4G26350	23.543	429	258	14	2	403	8	393	2.93e-11	65.5
MS.gene041326.t1	AT5G02910	26.557	305	196	9	1	302	16	295	3.18e-11	65.1
MS.gene041326.t1	AT5G02930	28.283	198	119	8	1	194	33	211	3.75e-11	65.5
MS.gene041326.t1	AT3G49030	24.161	447	287	17	1	435	26	432	5.17e-11	64.7
MS.gene041326.t1	AT1G21990	24.222	450	259	18	2	406	15	427	5.95e-11	64.7
MS.gene041326.t1	AT3G60040	25.000	460	259	18	1	422	18	429	8.24e-11	64.7
MS.gene041326.t1	AT3G60040	25.000	460	259	18	1	422	237	648	8.92e-11	64.7
MS.gene041326.t1	AT3G60040	25.000	460	259	18	1	422	235	646	9.14e-11	64.3

Find 52 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATAACTCGTTCGGGGTTTA+TGG	0.105473	5.2:+29879517	MS.gene041326:CDS
ATATCAAGAACTTCCAATTT+AGG	0.237488	5.2:-29879581	None:intergenic
GAGCTATTGAGTGCACTTAA+AGG	0.248375	5.2:+29879236	MS.gene041326:CDS
ACAAATCCAATCACATAAAA+AGG	0.251110	5.2:+29878613	MS.gene041326:CDS
TCTACACAAGACTCCTAAAT+TGG	0.263368	5.2:+29879568	MS.gene041326:CDS
TGATCTTGTATAAATGTATT+TGG	0.263853	5.2:+29878955	MS.gene041326:CDS
ATCAGATAGTTTGGAGGAAT+TGG	0.277385	5.2:+29879897	MS.gene041326:CDS
TCACTCTAGCTCTTCTTGTT+TGG	0.289191	5.2:+29879031	MS.gene041326:CDS
TCCATTGTTGATGCAAATAT+TGG	0.301151	5.2:+29879161	MS.gene041326:CDS
CTACCAAAAGACTCATCATT+TGG	0.337795	5.2:-29879825	None:intergenic
TGAAGTTCTAACCGCCTCTT+TGG	0.344605	5.2:-29878451	None:intergenic
CAAGTTAAGGACAAAATATT+CGG	0.346198	5.2:-29879095	None:intergenic
CATCTTTACATAACTCGTTC+GGG	0.346943	5.2:+29879509	MS.gene041326:CDS
GTACGATATTGTTCGCTTTG+TGG	0.366149	5.2:-29879200	None:intergenic
GGTAGAAAAGACTACAATCT+TGG	0.366681	5.2:+29879843	MS.gene041326:CDS
AGTCCAAATGATGAGTCTTT+TGG	0.384646	5.2:+29879822	MS.gene041326:CDS
CTATTGAAAGCTCCACATTA+AGG	0.395425	5.2:+29878997	MS.gene041326:CDS
ACATCTTTACATAACTCGTT+CGG	0.401772	5.2:+29879508	MS.gene041326:CDS
CGGAGTGCTGTTGCAAGTTA+AGG	0.402064	5.2:-29879108	None:intergenic
TCGAGATTTGATTCGTAAAG+AGG	0.417953	5.2:-29878540	None:intergenic
TTCCATCACGAACAAACAAA+AGG	0.435263	5.2:-29878830	None:intergenic
GGAAGTTCTTGATATTCCTA+TGG	0.455577	5.2:+29879589	MS.gene041326:CDS
ATATAATGAAGAATGACATC+AGG	0.497527	5.2:-29878411	None:intergenic
AGATAGTTTGGAGGAATTGG+AGG	0.501649	5.2:+29879900	MS.gene041326:CDS
GGGAAAGCTGATAAACAGTT+GGG	0.511215	5.2:-29878774	None:intergenic
AAGATCATCTCTTCTAGCAT+AGG	0.512852	5.2:-29878939	None:intergenic
CGAATCAAATCTCGAAAATG+AGG	0.513263	5.2:+29878548	MS.gene041326:CDS
ACAAGAAGAGCTAGAGTGAA+TGG	0.517753	5.2:-29879027	None:intergenic
AGATCATCTCTTCTAGCATA+GGG	0.523414	5.2:-29878938	None:intergenic
AGGGAAAGCTGATAAACAGT+TGG	0.523457	5.2:-29878775	None:intergenic
TTTGATTCGTAAAGAGGATG+AGG	0.525108	5.2:-29878534	None:intergenic
GTCTTTCCACAAGATCTAAG+AGG	0.527819	5.2:-29878584	None:intergenic
TAACTGCCTCTTAGATCTTG+TGG	0.535929	5.2:+29878578	MS.gene041326:CDS
ACCAATATTTGCATCAACAA+TGG	0.542438	5.2:-29879162	None:intergenic
TCCATCACGAACAAACAAAA+GGG	0.546120	5.2:-29878829	None:intergenic
TCCGACACTAAAATTTGTCC+TGG	0.554660	5.2:+29879127	MS.gene041326:CDS
GTCCACAAGTATCTCCACTT+TGG	0.557673	5.2:-29878483	None:intergenic
TTCTTTACTCTCAACCAAAG+AGG	0.562637	5.2:+29878437	MS.gene041326:CDS
TTTGCATCAACAATGGAGAT+CGG	0.564211	5.2:-29879155	None:intergenic
CAATTGCAATCTTTAAGTCA+CGG	0.565804	5.2:+29879943	MS.gene041326:CDS
CTTCAATATTATCACCAAAG+TGG	0.569294	5.2:+29878469	MS.gene041326:CDS
TGTAAAGATGTGTCAAGTTG+TGG	0.569486	5.2:-29879496	None:intergenic
AAAACAACTTATTCAATGAA+GGG	0.574245	5.2:-29878794	None:intergenic
TGTGTCAAGTTGTGGAACAA+AGG	0.579386	5.2:-29879488	None:intergenic
TCAAGTTGTGGAACAAAGGA+AGG	0.583398	5.2:-29879484	None:intergenic
AGAAAAGACTACAATCTTGG+AGG	0.595886	5.2:+29879846	MS.gene041326:CDS
CACCAAAGTGGAGATACTTG+TGG	0.617822	5.2:+29878481	MS.gene041326:CDS
CAATGGAGATCGGATTAACC+AGG	0.626296	5.2:-29879145	None:intergenic
ATCTTTACATAACTCGTTCG+GGG	0.632593	5.2:+29879510	MS.gene041326:CDS
AGAGAAGATTTGAAACAACA+AGG	0.637655	5.2:-29879757	None:intergenic
TTTACTCTCAACCAAAGAGG+CGG	0.653818	5.2:+29878440	MS.gene041326:CDS
AATGGTCAATGTCCTTAATG+TGG	0.668442	5.2:-29879009	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTGTTTATTATTTCTTATTT+AGG	+	chr5.2:29879687-29879706	MS.gene041326:intron	10.0%
!!	AAAAACAACTTATTCAATGA+AGG	-	chr5.2:29878798-29878817	None:intergenic	20.0%
!!	AAAACAACTTATTCAATGAA+GGG	-	chr5.2:29878797-29878816	None:intergenic	20.0%
!!	TGATCTTGTATAAATGTATT+TGG	+	chr5.2:29878955-29878974	MS.gene041326:CDS	20.0%
!!!	AATAAGTTGTTTTTACAACT+TGG	+	chr5.2:29878804-29878823	MS.gene041326:CDS	20.0%
!!!	ATAAGTTGTTTTTACAACTT+GGG	+	chr5.2:29878805-29878824	MS.gene041326:CDS	20.0%
!	ACAAATCCAATCACATAAAA+AGG	+	chr5.2:29878613-29878632	MS.gene041326:CDS	25.0%
!	ATATAATGAAGAATGACATC+AGG	-	chr5.2:29878414-29878433	None:intergenic	25.0%
!	ATATCAAGAACTTCCAATTT+AGG	-	chr5.2:29879584-29879603	None:intergenic	25.0%
!	CAAGATATAAGATATACCAT+AGG	-	chr5.2:29879608-29879627	None:intergenic	25.0%
!	CAAGTTAAGGACAAAATATT+CGG	-	chr5.2:29879098-29879117	None:intergenic	25.0%
!	GTATATCTTATATCTTGACT+TGG	+	chr5.2:29879611-29879630	MS.gene041326:intron	25.0%
!	TATCACACAATAATCGATAT+TGG	+	chr5.2:29879412-29879431	MS.gene041326:intron	25.0%
!!	ATTTTTATCAGATAGTTTGG+AGG	+	chr5.2:29879891-29879910	MS.gene041326:CDS	25.0%
!!	CTTAGCATTTCTGATTTTAA+TGG	+	chr5.2:29879787-29879806	MS.gene041326:CDS	25.0%
!!	TATAACAAGTGATACTTTTC+AGG	+	chr5.2:29879274-29879293	MS.gene041326:CDS	25.0%
!!	TTAGGTATTTTGCTTACATT+TGG	+	chr5.2:29879705-29879724	MS.gene041326:intron	25.0%
	ACATCTTTACATAACTCGTT+CGG	+	chr5.2:29879508-29879527	MS.gene041326:CDS	30.0%
	ACCAATATTTGCATCAACAA+TGG	-	chr5.2:29879165-29879184	None:intergenic	30.0%
	ATCTGATAAAAATCCCGAAA+AGG	-	chr5.2:29879884-29879903	None:intergenic	30.0%
	CAATTGCAATCTTTAAGTCA+CGG	+	chr5.2:29879943-29879962	MS.gene041326:CDS	30.0%
	CTAAATGCAACAATGTCAAT+AGG	-	chr5.2:29879356-29879375	None:intergenic	30.0%
	CTTCAATATTATCACCAAAG+TGG	+	chr5.2:29878469-29878488	MS.gene041326:CDS	30.0%
	TCCATTGTTGATGCAAATAT+TGG	+	chr5.2:29879161-29879180	MS.gene041326:CDS	30.0%
!	AGAGAAGATTTGAAACAACA+AGG	-	chr5.2:29879760-29879779	None:intergenic	30.0%
!	GAAATGAAGATATCCTTTTC+GGG	+	chr5.2:29879868-29879887	MS.gene041326:CDS	30.0%
!	GGAAATGAAGATATCCTTTT+CGG	+	chr5.2:29879867-29879886	MS.gene041326:CDS	30.0%
!	GGGATTTTTATCAGATAGTT+TGG	+	chr5.2:29879888-29879907	MS.gene041326:CDS	30.0%
	AAGATCATCTCTTCTAGCAT+AGG	-	chr5.2:29878942-29878961	None:intergenic	35.0%
	AATGGTCAATGTCCTTAATG+TGG	-	chr5.2:29879012-29879031	None:intergenic	35.0%
	AGAAAAGACTACAATCTTGG+AGG	+	chr5.2:29879846-29879865	MS.gene041326:CDS	35.0%
	AGATCATCTCTTCTAGCATA+GGG	-	chr5.2:29878941-29878960	None:intergenic	35.0%
	ATCAGATAGTTTGGAGGAAT+TGG	+	chr5.2:29879897-29879916	MS.gene041326:CDS	35.0%
	ATCTTTACATAACTCGTTCG+GGG	+	chr5.2:29879510-29879529	MS.gene041326:CDS	35.0%
	CATCTTTACATAACTCGTTC+GGG	+	chr5.2:29879509-29879528	MS.gene041326:CDS	35.0%
	CGAATCAAATCTCGAAAATG+AGG	+	chr5.2:29878548-29878567	MS.gene041326:CDS	35.0%
	CTACCAAAAGACTCATCATT+TGG	-	chr5.2:29879828-29879847	None:intergenic	35.0%
	CTATTGAAAGCTCCACATTA+AGG	+	chr5.2:29878997-29879016	MS.gene041326:CDS	35.0%
	GGAAGTTCTTGATATTCCTA+TGG	+	chr5.2:29879589-29879608	MS.gene041326:CDS	35.0%
	GGTAGAAAAGACTACAATCT+TGG	+	chr5.2:29879843-29879862	MS.gene041326:CDS	35.0%
	TCCATCACGAACAAACAAAA+GGG	-	chr5.2:29878832-29878851	None:intergenic	35.0%
	TCTACACAAGACTCCTAAAT+TGG	+	chr5.2:29879568-29879587	MS.gene041326:CDS	35.0%
	TTCCATCACGAACAAACAAA+AGG	-	chr5.2:29878833-29878852	None:intergenic	35.0%
	TTCTTTACTCTCAACCAAAG+AGG	+	chr5.2:29878437-29878456	MS.gene041326:CDS	35.0%
	TTTGCATCAACAATGGAGAT+CGG	-	chr5.2:29879158-29879177	None:intergenic	35.0%
!	AGTCCAAATGATGAGTCTTT+TGG	+	chr5.2:29879822-29879841	MS.gene041326:CDS	35.0%
!	GCAAAGCCTTTTTATGTGAT+TGG	-	chr5.2:29878622-29878641	None:intergenic	35.0%
!	GGTATTTTGCTTACATTTGG+AGG	+	chr5.2:29879708-29879727	MS.gene041326:intron	35.0%
!	TCGAGATTTGATTCGTAAAG+AGG	-	chr5.2:29878543-29878562	None:intergenic	35.0%
!	TGTAAAGATGTGTCAAGTTG+TGG	-	chr5.2:29879499-29879518	None:intergenic	35.0%
!	TTTGATTCGTAAAGAGGATG+AGG	-	chr5.2:29878537-29878556	None:intergenic	35.0%
!!	ACCAGGACAAATTTTAGTGT+CGG	-	chr5.2:29879131-29879150	None:intergenic	35.0%
!!	CCACTAGAGTCTTTACTTTT+CGG	+	chr5.2:29879445-29879464	MS.gene041326:intron	35.0%
	ACAAGAAGAGCTAGAGTGAA+TGG	-	chr5.2:29879030-29879049	None:intergenic	40.0%
	AGATAGTTTGGAGGAATTGG+AGG	+	chr5.2:29879900-29879919	MS.gene041326:CDS	40.0%
	AGGGAAAGCTGATAAACAGT+TGG	-	chr5.2:29878778-29878797	None:intergenic	40.0%
	CCGAAAAGTAAAGACTCTAG+TGG	-	chr5.2:29879448-29879467	None:intergenic	40.0%
	GAGCTATTGAGTGCACTTAA+AGG	+	chr5.2:29879236-29879255	MS.gene041326:CDS	40.0%
	GGGAAAGCTGATAAACAGTT+GGG	-	chr5.2:29878777-29878796	None:intergenic	40.0%
	GTACGATATTGTTCGCTTTG+TGG	-	chr5.2:29879203-29879222	None:intergenic	40.0%
	GTCTTTCCACAAGATCTAAG+AGG	-	chr5.2:29878587-29878606	None:intergenic	40.0%
	TAACTGCCTCTTAGATCTTG+TGG	+	chr5.2:29878578-29878597	MS.gene041326:CDS	40.0%
	TCCGACACTAAAATTTGTCC+TGG	+	chr5.2:29879127-29879146	MS.gene041326:CDS	40.0%
	TTTACTCTCAACCAAAGAGG+CGG	+	chr5.2:29878440-29878459	MS.gene041326:CDS	40.0%
!	CAGTGCAACAACTTTTCTCT+GGG	+	chr5.2:29878913-29878932	MS.gene041326:CDS	40.0%
!	TCAAGTTGTGGAACAAAGGA+AGG	-	chr5.2:29879487-29879506	None:intergenic	40.0%
!	TCAGTGCAACAACTTTTCTC+TGG	+	chr5.2:29878912-29878931	MS.gene041326:CDS	40.0%
!	TGTGTCAAGTTGTGGAACAA+AGG	-	chr5.2:29879491-29879510	None:intergenic	40.0%
!!	CTAGAGTCTTTACTTTTCGG+CGG	+	chr5.2:29879448-29879467	MS.gene041326:intron	40.0%
!!	TCACTCTAGCTCTTCTTGTT+TGG	+	chr5.2:29879031-29879050	MS.gene041326:CDS	40.0%
!!	TCCCTTTTGTTTGTTCGTGA+TGG	+	chr5.2:29878828-29878847	MS.gene041326:CDS	40.0%
	CAATGGAGATCGGATTAACC+AGG	-	chr5.2:29879148-29879167	None:intergenic	45.0%
	CACCAAAGTGGAGATACTTG+TGG	+	chr5.2:29878481-29878500	MS.gene041326:CDS	45.0%
	CATAACTCGTTCGGGGTTTA+TGG	+	chr5.2:29879517-29879536	MS.gene041326:CDS	45.0%
	GTCCACAAGTATCTCCACTT+TGG	-	chr5.2:29878486-29878505	None:intergenic	45.0%
!	TGAAGTTCTAACCGCCTCTT+TGG	-	chr5.2:29878454-29878473	None:intergenic	45.0%
!!	CGGAGTGCTGTTGCAAGTTA+AGG	-	chr5.2:29879111-29879130	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.2	gene	29878408	29879990	29878408	ID=MS.gene041326
chr5.2	mRNA	29878408	29879990	29878408	ID=MS.gene041326.t1;Parent=MS.gene041326
chr5.2	exon	29878408	29879295	29878408	ID=MS.gene041326.t1.exon1;Parent=MS.gene041326.t1
chr5.2	CDS	29878408	29879295	29878408	ID=cds.MS.gene041326.t1;Parent=MS.gene041326.t1
chr5.2	exon	29879452	29879610	29879452	ID=MS.gene041326.t1.exon2;Parent=MS.gene041326.t1
chr5.2	CDS	29879452	29879610	29879452	ID=cds.MS.gene041326.t1;Parent=MS.gene041326.t1
chr5.2	exon	29879709	29879990	29879709	ID=MS.gene041326.t1.exon3;Parent=MS.gene041326.t1
chr5.2	CDS	29879709	29879990	29879709	ID=cds.MS.gene041326.t1;Parent=MS.gene041326.t1

Gene Sequence

>MS.gene041326

ATGCCTGATGTCATTCTTCATTATATTCTTTCTTTACTCTCAACCAAAGAGGCGGTTAGAACTTCAATATTATCACCAAAGTGGAGATACTTGTGGACTCAATTATCTGTCTTTGAATTTAAAATTCCTCATCCTCTTTACGAATCAAATCTCGAAAATGAGGACTCAGCTAACTGCCTCTTAGATCTTGTGGAAAGACTACTACACAAATCCAATCACATAAAAAGGCTTTGCATTGAAATACTTAAAATCACTGTTGATGCTAACAAATTTACTTCTTTAGTATCTTCTGCAGCGAAGCACAATGTGCATGATCTTCAACTTTCAATAGATGATAAAAAATATCTAGATACGATATTTGTGTTACCCAACTGTTTATCAGCTTTCCCTTCATTGAATAAGTTGTTTTTACAACTTGGGTCCCTTTTGTTTGTTCGTGATGGAATTTGTTTCTCTAATCTGAAGACGTTAAATCTTTCAGATGTTAGATTTGTATATGAGAAGTCAGTGCAACAACTTTTCTCTGGGTGCCCTATGCTAGAAGAGATGATCTTGTATAAATGTATTTGGCAGTACATAAATGAGATCACTATTGAAAGCTCCACATTAAGGACATTGACCATTCACTCTAGCTCTTCTTGTTTGGATTATGATGATTATGACTCTTTTACAATTAAGATTAATGCTCCGAATATTTTGTCCTTAACTTGCAACAGCACTCCGACACTAAAATTTGTCCTGGTTAATCCGATCTCCATTGTTGATGCAAATATTGGTCTTGAGTTTGACGTTCCACAAAGCGAACAATATCGTACTGAGTGTGTATTTGAGCTATTGAGTGCACTTAAAGGTGTCAAGTCTCTCACTATAACAAGTGATACTTTTCAGGTATGTTTGTTAGTTTTCTCGTCATTTTCATTTTCTTTAGTGTATTTAGAAGTGATGCCTATTGACATTGTTGCATTTAGTTTTTTGTTTTTTTAATCATTGTTTATTTCTCTGTGTATCACACAATAATCGATATTGGTTTGCTTACTCCACTAGAGTCTTTACTTTTCGGCGGATACTCTTCATCTCCTTCCTTTGTTCCACAACTTGACACATCTTTACATAACTCGTTCGGGGTTTATGGATTTCACTCTTGAAGTACTATTTGACATTCTACACAAGACTCCTAAATTGGAAGTTCTTGATATTCCTATGGTATATCTTATATCTTGACTTGGATGCTATCATTTGTCAATTGTCGTGTTTGTGTGATGTTATTTTTGTCGCTGATTTGTTTATTATTTCTTATTTAGGTATTTTGCTTACATTTGGAGGATGAAGAAGTGACAATAAACTTAGTGCCTTGTTGTTTCAAATCTTCTCTCAAATTTCTTAGCATTTCTGATTTTAATGGATACAAATATGAAGTCCAAATGATGAGTCTTTTGGTAGAAAAGACTACAATCTTGGAGGAAATGAAGATATCCTTTTCGGGATTTTTATCAGATAGTTTGGAGGAATTGGAGGAAAAGACTGCTGTCAAGAATCAATTGCAATCTTTAAGTCACGGAAAATTTGCTATTAAGTTTAAGTAA

Protein sequence

>MS.gene041326.t1

MPDVILHYILSLLSTKEAVRTSILSPKWRYLWTQLSVFEFKIPHPLYESNLENEDSANCLLDLVERLLHKSNHIKRLCIEILKITVDANKFTSLVSSAAKHNVHDLQLSIDDKKYLDTIFVLPNCLSAFPSLNKLFLQLGSLLFVRDGICFSNLKTLNLSDVRFVYEKSVQQLFSGCPMLEEMILYKCIWQYINEITIESSTLRTLTIHSSSSCLDYDDYDSFTIKINAPNILSLTCNSTPTLKFVLVNPISIVDANIGLEFDVPQSEQYRTECVFELLSALKGVKSLTITSDTFQSLYFSADTLHLLPLFHNLTHLYITRSGFMDFTLEVLFDILHKTPKLEVLDIPMVFCLHLEDEEVTINLVPCCFKSSLKFLSISDFNGYKYEVQMMSLLVEKTTILEEMKISFSGFLSDSLEELEEKTAVKNQLQSLSHGKFAIKFK