Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29873.t1 | XP_003599874.2 | 66.5 | 316 | 35 | 3 | 28 | 272 | 1 | 316 | 6.30E-101 | 377.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29873.t1 | Q9FJU2 | 28.8 | 191 | 111 | 6 | 52 | 229 | 4 | 182 | 9.8e-10 | 65.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29873.t1 | G7IXZ7 | 66.5 | 316 | 35 | 3 | 28 | 272 | 1 | 316 | 4.6e-101 | 377.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29873.t1 | MTR_3g048290 | 87.791 | 172 | 20 | 1 | 28 | 198 | 1 | 172 | 7.97e-102 | 307 |
| MS.gene29873.t1 | MTR_3g048290 | 77.632 | 76 | 15 | 1 | 199 | 272 | 241 | 316 | 1.54e-28 | 115 |
| MS.gene29873.t1 | MTR_4g080787 | 67.045 | 176 | 44 | 2 | 34 | 198 | 6 | 178 | 8.12e-68 | 220 |
| MS.gene29873.t1 | MTR_4g080787 | 54.321 | 81 | 34 | 1 | 199 | 279 | 247 | 324 | 2.29e-17 | 82.8 |
| MS.gene29873.t1 | MTR_4g080773 | 65.341 | 176 | 47 | 2 | 34 | 198 | 6 | 178 | 8.00e-66 | 215 |
| MS.gene29873.t1 | MTR_4g080773 | 46.667 | 105 | 53 | 1 | 175 | 279 | 226 | 327 | 3.12e-18 | 85.5 |
| MS.gene29873.t1 | MTR_4g080773 | 65.341 | 176 | 47 | 2 | 34 | 198 | 6 | 178 | 9.36e-66 | 215 |
| MS.gene29873.t1 | MTR_4g080773 | 46.667 | 105 | 53 | 1 | 175 | 279 | 226 | 327 | 2.91e-18 | 85.5 |
| MS.gene29873.t1 | MTR_4g080807 | 53.297 | 182 | 51 | 1 | 122 | 269 | 1 | 182 | 2.08e-50 | 172 |
| MS.gene29873.t1 | MTR_5g039950 | 37.374 | 297 | 123 | 4 | 28 | 279 | 1 | 279 | 4.30e-50 | 172 |
| MS.gene29873.t1 | MTR_5g039970 | 54.217 | 166 | 75 | 1 | 32 | 197 | 1 | 165 | 5.64e-46 | 159 |
| MS.gene29873.t1 | MTR_7g023330 | 39.231 | 260 | 143 | 3 | 33 | 279 | 3 | 260 | 8.25e-41 | 147 |
| MS.gene29873.t1 | MTR_4g130200 | 36.806 | 288 | 106 | 6 | 28 | 277 | 1 | 250 | 3.99e-39 | 142 |
| MS.gene29873.t1 | MTR_4g080590 | 44.706 | 170 | 89 | 1 | 28 | 197 | 1 | 165 | 1.94e-38 | 140 |
| MS.gene29873.t1 | MTR_4g080590 | 44.706 | 170 | 89 | 1 | 28 | 197 | 1 | 165 | 6.29e-38 | 140 |
| MS.gene29873.t1 | MTR_4g080813 | 63.529 | 85 | 30 | 1 | 32 | 115 | 1 | 85 | 5.43e-29 | 107 |
| MS.gene29873.t1 | MTR_7g039630 | 38.953 | 172 | 66 | 2 | 28 | 196 | 1 | 136 | 1.14e-27 | 110 |
| MS.gene29873.t1 | MTR_7g023310 | 40.230 | 174 | 96 | 3 | 28 | 198 | 1 | 169 | 2.27e-25 | 105 |
| MS.gene29873.t1 | MTR_4g081030 | 38.202 | 178 | 92 | 4 | 40 | 213 | 7 | 170 | 1.01e-21 | 95.1 |
| MS.gene29873.t1 | MTR_2g094750 | 39.572 | 187 | 90 | 6 | 48 | 215 | 88 | 270 | 2.33e-21 | 94.7 |
| MS.gene29873.t1 | MTR_2g082800 | 31.613 | 155 | 96 | 6 | 38 | 189 | 14 | 161 | 4.03e-13 | 70.1 |
| MS.gene29873.t1 | MTR_5g080710 | 34.337 | 166 | 101 | 4 | 33 | 198 | 17 | 174 | 9.60e-13 | 68.9 |
| MS.gene29873.t1 | MTR_3g023630 | 29.050 | 179 | 107 | 6 | 50 | 224 | 8 | 170 | 3.35e-11 | 63.9 |
| MS.gene29873.t1 | MTR_3g023270 | 29.448 | 163 | 96 | 3 | 41 | 198 | 3 | 151 | 3.85e-11 | 63.5 |
| MS.gene29873.t1 | MTR_4g103670 | 31.481 | 162 | 92 | 5 | 46 | 188 | 21 | 182 | 5.27e-11 | 63.5 |
| MS.gene29873.t1 | MTR_3g014590 | 46.552 | 58 | 31 | 0 | 40 | 97 | 1 | 58 | 5.97e-11 | 63.2 |
| MS.gene29873.t1 | MTR_5g005690 | 24.339 | 189 | 132 | 4 | 52 | 236 | 23 | 204 | 6.00e-11 | 63.5 |
| MS.gene29873.t1 | MTR_3g014550 | 46.552 | 58 | 31 | 0 | 40 | 97 | 1 | 58 | 6.50e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29873.t1 | AT3G58860 | 27.273 | 154 | 106 | 4 | 50 | 199 | 7 | 158 | 6.81e-12 | 66.6 |
| MS.gene29873.t1 | AT3G26922 | 29.825 | 171 | 106 | 5 | 50 | 215 | 14 | 175 | 2.80e-11 | 63.9 |
| MS.gene29873.t1 | AT3G26922 | 29.825 | 171 | 106 | 5 | 50 | 215 | 14 | 175 | 2.80e-11 | 63.9 |
| MS.gene29873.t1 | AT5G38396 | 30.137 | 146 | 96 | 4 | 50 | 191 | 2 | 145 | 7.23e-11 | 63.2 |
Find 74 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCACTTCTTTGCTAATA+TGG | 0.194272 | 3.3:-38481383 | None:intergenic |
| ACAGGGATAAATTCTATTAT+TGG | 0.228954 | 3.3:-38482029 | None:intergenic |
| ACTAGGGAGGTCAGGTTAAC+AGG | 0.276184 | 3.3:-38482047 | None:intergenic |
| TCATTAAATGAATTGCGTTT+AGG | 0.349692 | 3.3:+38481700 | MS.gene29873:CDS |
| AATTGATGACACAACTTTCC+AGG | 0.350847 | 3.3:-38482804 | None:intergenic |
| TGCACATCGGTTGATGAGAT+TGG | 0.364438 | 3.3:-38481247 | None:intergenic |
| ACGTGAGCCGCTGATTCATC+AGG | 0.365466 | 3.3:+38483774 | MS.gene29873:CDS |
| GTTGATGCAATCATTGATCT+TGG | 0.395966 | 3.3:+38482068 | MS.gene29873:CDS |
| AGGTGTGGAAGGTATATTCT+AGG | 0.406066 | 3.3:+38483812 | MS.gene29873:CDS |
| GGCCAAGATATTGTGGTTTG+TGG | 0.422064 | 3.3:-38481618 | None:intergenic |
| TCACGTGGCATTCCTGCAGC+TGG | 0.431569 | 3.3:-38483757 | None:intergenic |
| GGTAGGCTGCTGTCAGCTGC+TGG | 0.435700 | 3.3:+38480624 | MS.gene29873:CDS |
| GATAAATTCTATTATTGGTA+TGG | 0.438106 | 3.3:-38482024 | None:intergenic |
| AATTGCCTCTTAGATCTAGT+TGG | 0.454657 | 3.3:+38481490 | MS.gene29873:CDS |
| ATACAGCTTCCAATTGGTTC+TGG | 0.462061 | 3.3:-38482780 | None:intergenic |
| AACCACAAACCACAATATCT+TGG | 0.462119 | 3.3:+38481616 | MS.gene29873:CDS |
| CCAGGCATACAGCTTCCAAT+TGG | 0.466181 | 3.3:-38482786 | None:intergenic |
| CCAATTGGAAGCTGTATGCC+TGG | 0.472342 | 3.3:+38482786 | MS.gene29873:CDS |
| CAATATCTTGGCCTTTCACT+AGG | 0.475278 | 3.3:+38481628 | MS.gene29873:CDS |
| TCAACAGCTGTTATCTGTGT+TGG | 0.479644 | 3.3:+38480603 | MS.gene29873:CDS |
| TATTCTAGGAGGGGTAAGAA+AGG | 0.481740 | 3.3:+38483826 | MS.gene29873:CDS |
| GTGTTCAATTGAGCTATTGA+AGG | 0.484023 | 3.3:+38482127 | MS.gene29873:CDS |
| ATTGAACACTGAGCAGCATA+TGG | 0.489422 | 3.3:-38482113 | None:intergenic |
| ATTGAGCTATTGAAGGGACT+TGG | 0.497912 | 3.3:+38482134 | MS.gene29873:CDS |
| GGATGATGTCCAGAACCAAT+TGG | 0.507624 | 3.3:+38482771 | MS.gene29873:CDS |
| TTGCATCAACTAGGGAGGTC+AGG | 0.512234 | 3.3:-38482055 | None:intergenic |
| TCTACTCATGTTGAAAGGCT+TGG | 0.512446 | 3.3:+38481529 | MS.gene29873:CDS |
| ATCAGCTGATGTGGAGAAGC+TGG | 0.513693 | 3.3:+38482750 | MS.gene29873:intron |
| TTGATGCAATCATTGATCTT+GGG | 0.514126 | 3.3:+38482069 | MS.gene29873:CDS |
| AAAATGAAAGGCAGATAAGT+AGG | 0.518650 | 3.3:-38481416 | None:intergenic |
| TGTCATCCACATTATGTCGT+TGG | 0.519049 | 3.3:-38481276 | None:intergenic |
| GACAGGACTCAGCCAGCTGC+AGG | 0.526053 | 3.3:+38483745 | MS.gene29873:intron |
| CTTCCATATTAGCAAAGAAG+TGG | 0.526172 | 3.3:+38481380 | MS.gene29873:CDS |
| CTGATTCATCAGGGGTCAAG+TGG | 0.535254 | 3.3:+38483784 | MS.gene29873:CDS |
| GGTCAAGTGGGTCCAAGGTG+TGG | 0.539777 | 3.3:+38483797 | MS.gene29873:CDS |
| GTCTTCCAACTAGATCTAAG+AGG | 0.539951 | 3.3:-38481495 | None:intergenic |
| TGAGCAGGTAGCACAGGTCA+TGG | 0.540814 | 3.3:+38481219 | MS.gene29873:intron |
| AGAATATACCTTCCACACCT+TGG | 0.545630 | 3.3:-38483809 | None:intergenic |
| TCAGGGGTCAAGTGGGTCCA+AGG | 0.554410 | 3.3:+38483792 | MS.gene29873:CDS |
| AGTGAAAGGCCAAGATATTG+TGG | 0.556725 | 3.3:-38481625 | None:intergenic |
| ATTCTAGGAGGGGTAAGAAA+GGG | 0.559363 | 3.3:+38483827 | MS.gene29873:CDS |
| ATCAATGATTGCATCAACTA+GGG | 0.559437 | 3.3:-38482063 | None:intergenic |
| CGTGAGCCGCTGATTCATCA+GGG | 0.560736 | 3.3:+38483775 | MS.gene29873:CDS |
| ACTACAAGTTTGAAAATGAA+AGG | 0.563867 | 3.3:-38481428 | None:intergenic |
| CAGCTGTTATCTGTGTTGGT+AGG | 0.566508 | 3.3:+38480607 | MS.gene29873:CDS |
| CATTTCGATCACCTAGTGAA+AGG | 0.566923 | 3.3:-38481639 | None:intergenic |
| CAGGTAGCACAGGTCATGGT+TGG | 0.567538 | 3.3:+38481223 | MS.gene29873:intron |
| ATACGAAGAAGAACGCCCTC+AGG | 0.568089 | 3.3:-38481322 | None:intergenic |
| GATCAATGATTGCATCAACT+AGG | 0.571932 | 3.3:-38482064 | None:intergenic |
| TGATGAATCAGCGGCTCACG+TGG | 0.571944 | 3.3:-38483772 | None:intergenic |
| ACTAACTTTGTCTGTATCAA+CGG | 0.575187 | 3.3:-38481572 | None:intergenic |
| CTAGGGAGGTCAGGTTAACA+GGG | 0.575242 | 3.3:-38482046 | None:intergenic |
| GAGACATTTATCAGCTGATG+TGG | 0.575517 | 3.3:+38482741 | MS.gene29873:intron |
| AAGTGGGTCCAAGGTGTGGA+AGG | 0.577712 | 3.3:+38483801 | MS.gene29873:CDS |
| GTGGAAGGTATATTCTAGGA+GGG | 0.577738 | 3.3:+38483816 | MS.gene29873:CDS |
| TAAGATCCAACGACATAATG+TGG | 0.578294 | 3.3:+38481270 | MS.gene29873:CDS |
| TGTTCAATTGAGCTATTGAA+GGG | 0.579270 | 3.3:+38482128 | MS.gene29873:CDS |
| AGGAGGGGTAAGAAAGGGAA+TGG | 0.580961 | 3.3:+38483832 | MS.gene29873:CDS |
| CAAAGAAGTGGAAACACTTG+TGG | 0.593332 | 3.3:+38481392 | MS.gene29873:CDS |
| ACAAATCTACTCATGTTGAA+AGG | 0.598111 | 3.3:+38481524 | MS.gene29873:CDS |
| AGGGGTAAGAAAGGGAATGG+TGG | 0.603192 | 3.3:+38483835 | MS.gene29873:CDS |
| GCAATCATTGATCTTGGGTG+CGG | 0.612056 | 3.3:+38482074 | MS.gene29873:CDS |
| GCAGCATATGGTTCATCATG+TGG | 0.629448 | 3.3:-38482101 | None:intergenic |
| TCGAAAGCAGCGAAACTATG+TGG | 0.637922 | 3.3:-38481676 | None:intergenic |
| TGTGGAAGGTATATTCTAGG+AGG | 0.646814 | 3.3:+38483815 | MS.gene29873:CDS |
| TGATTCATCAGGGGTCAAGT+GGG | 0.650760 | 3.3:+38483785 | MS.gene29873:CDS |
| ATGATTAGTGACTTACCTGA+GGG | 0.657684 | 3.3:+38481307 | MS.gene29873:CDS |
| TGGAAGGTATATTCTAGGAG+GGG | 0.662743 | 3.3:+38483817 | MS.gene29873:CDS |
| TCGTTGGATCTTATGCACAT+CGG | 0.665599 | 3.3:-38481260 | None:intergenic |
| TATGATTAGTGACTTACCTG+AGG | 0.681528 | 3.3:+38481306 | MS.gene29873:CDS |
| AATGATTGCATCAACTAGGG+AGG | 0.681703 | 3.3:-38482060 | None:intergenic |
| CTTGACCCCTGATGAATCAG+CGG | 0.688235 | 3.3:-38483781 | None:intergenic |
| TTCACTCTACACATTCCTAG+TGG | 0.705572 | 3.3:+38481730 | MS.gene29873:CDS |
| GTGAGCCGCTGATTCATCAG+GGG | 0.711840 | 3.3:+38483776 | MS.gene29873:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAATGTAAACTAATA+AGG | - | chr3.3:38481180-38481199 | None:intergenic | 10.0% |
| !! | AAGTAAAAATATTACTGAAA+AGG | - | chr3.3:38483692-38483711 | None:intergenic | 15.0% |
| !! | TTTGATTGTGTTAAAATATT+TGG | + | chr3.3:38483498-38483517 | MS.gene29873:intron | 15.0% |
| !!! | ACTGAATCAATTTATTTTAT+TGG | + | chr3.3:38483002-38483021 | MS.gene29873:intron | 15.0% |
| !!! | TTAATTTAATATTTTTGAGC+AGG | + | chr3.3:38481204-38481223 | MS.gene29873:intron | 15.0% |
| !!! | TTATGCTTTTTAAATTTTCA+TGG | + | chr3.3:38482687-38482706 | MS.gene29873:intron | 15.0% |
| !! | AGTTACAAGTAAAAAAAGAA+GGG | - | chr3.3:38481157-38481176 | None:intergenic | 20.0% |
| !! | GATAAATTCTATTATTGGTA+TGG | - | chr3.3:38482027-38482046 | None:intergenic | 20.0% |
| !!! | GGAAAACAATGATATTATTT+TGG | + | chr3.3:38482558-38482577 | MS.gene29873:intron | 20.0% |
| !!! | TAAATTGATTCAGTTAACAA+TGG | - | chr3.3:38482996-38483015 | None:intergenic | 20.0% |
| !!! | TATATAATTTTGCATTTGAC+AGG | + | chr3.3:38483728-38483747 | MS.gene29873:intron | 20.0% |
| ! | AAAAGAATCTTGAATTCAGT+AGG | + | chr3.3:38483069-38483088 | MS.gene29873:intron | 25.0% |
| ! | AAATTGTAAAATGTAGGAAG+AGG | - | chr3.3:38482386-38482405 | None:intergenic | 25.0% |
| ! | AAGCAATAAAGAATGAAGAA+AGG | - | chr3.3:38482850-38482869 | None:intergenic | 25.0% |
| ! | ACAGGGATAAATTCTATTAT+TGG | - | chr3.3:38482032-38482051 | None:intergenic | 25.0% |
| ! | ACTACAAGTTTGAAAATGAA+AGG | - | chr3.3:38481431-38481450 | None:intergenic | 25.0% |
| ! | ATTGTAAGATCTTCCAATTT+AGG | - | chr3.3:38482482-38482501 | None:intergenic | 25.0% |
| ! | GAGTTACAAGTAAAAAAAGA+AGG | - | chr3.3:38481158-38481177 | None:intergenic | 25.0% |
| ! | TAACATGGTCTAAAAATGTT+GGG | - | chr3.3:38483168-38483187 | None:intergenic | 25.0% |
| ! | TAACTAATAACTTGATGTGA+AGG | + | chr3.3:38483430-38483449 | MS.gene29873:intron | 25.0% |
| ! | TATGGTAAAAAGACTAGTAA+TGG | - | chr3.3:38482340-38482359 | None:intergenic | 25.0% |
| ! | TCATTAAATGAATTGCGTTT+AGG | + | chr3.3:38481700-38481719 | MS.gene29873:CDS | 25.0% |
| ! | TGATTGACTGAATTATAGAA+TGG | + | chr3.3:38483224-38483243 | MS.gene29873:intron | 25.0% |
| ! | TGCAGTTCAAAAAAAATACT+TGG | + | chr3.3:38480983-38481002 | MS.gene29873:intron | 25.0% |
| ! | TGTGTCAAATTGTAAAATGT+AGG | - | chr3.3:38482392-38482411 | None:intergenic | 25.0% |
| ! | TTAACATGGTCTAAAAATGT+TGG | - | chr3.3:38483169-38483188 | None:intergenic | 25.0% |
| ! | TTCATATGATCTCAAAAACA+TGG | - | chr3.3:38483575-38483594 | None:intergenic | 25.0% |
| ! | TTGTTTAGTGATTCTTGATT+AGG | + | chr3.3:38482590-38482609 | MS.gene29873:intron | 25.0% |
| !! | AAAGTTGTGTCATCAATTTT+TGG | + | chr3.3:38482809-38482828 | MS.gene29873:CDS | 25.0% |
| !! | ACTGAATTCAAGATTCTTTT+TGG | - | chr3.3:38483069-38483088 | None:intergenic | 25.0% |
| !! | CTGAATTCAAGATTCTTTTT+GGG | - | chr3.3:38483068-38483087 | None:intergenic | 25.0% |
| !! | GGAATTGGATAATTGTTATT+AGG | + | chr3.3:38481863-38481882 | MS.gene29873:intron | 25.0% |
| !! | TGAATTCAAGATTCTTTTTG+GGG | - | chr3.3:38483067-38483086 | None:intergenic | 25.0% |
| !!! | CTAGTCTTTTTACCATATAT+TGG | + | chr3.3:38482343-38482362 | MS.gene29873:intron | 25.0% |
| !!! | TACTTTGAATTTTCTGAAAC+TGG | + | chr3.3:38483103-38483122 | MS.gene29873:intron | 25.0% |
| !!! | TCATGTATACGGAATTTTTT+GGG | + | chr3.3:38480857-38480876 | MS.gene29873:intron | 25.0% |
| !!! | TTTGTCTGTTTTTCTTTGTA+TGG | + | chr3.3:38482868-38482887 | MS.gene29873:intron | 25.0% |
| AAAAAAAATACTTGGCGCAA+TGG | + | chr3.3:38480991-38481010 | MS.gene29873:intron | 30.0% | |
| AAAATGAAAGGCAGATAAGT+AGG | - | chr3.3:38481419-38481438 | None:intergenic | 30.0% | |
| AACATGGCATAATATAGACT+TGG | - | chr3.3:38483559-38483578 | None:intergenic | 30.0% | |
| AATGTCTTCAATTCAAGCTA+GGG | - | chr3.3:38481765-38481784 | None:intergenic | 30.0% | |
| ACAAAGGTGACATATATATG+CGG | - | chr3.3:38480901-38480920 | None:intergenic | 30.0% | |
| ACAAATCTACTCATGTTGAA+AGG | + | chr3.3:38481524-38481543 | MS.gene29873:CDS | 30.0% | |
| ACTAACTTTGTCTGTATCAA+CGG | - | chr3.3:38481575-38481594 | None:intergenic | 30.0% | |
| ACTACACATAAGAAAACTGA+TGG | - | chr3.3:38481937-38481956 | None:intergenic | 30.0% | |
| ATCAATGATTGCATCAACTA+GGG | - | chr3.3:38482066-38482085 | None:intergenic | 30.0% | |
| CAAAAAATTCCGTATACATG+AGG | - | chr3.3:38480858-38480877 | None:intergenic | 30.0% | |
| CATCATCTTGTGTAAAAAGT+AGG | + | chr3.3:38481063-38481082 | MS.gene29873:intron | 30.0% | |
| CATTCCATAATATAGAAGTG+TGG | + | chr3.3:38482913-38482932 | MS.gene29873:intron | 30.0% | |
| CTTGTGTAAAAAGTAGGATA+AGG | + | chr3.3:38481069-38481088 | MS.gene29873:intron | 30.0% | |
| GAATTATAGAATGGTAGGTT+AGG | + | chr3.3:38483233-38483252 | MS.gene29873:intron | 30.0% | |
| GCATTCAATCATACTTAACA+TGG | - | chr3.3:38483183-38483202 | None:intergenic | 30.0% | |
| TACGTGTTTCGTATAATTGT+TGG | + | chr3.3:38482274-38482293 | MS.gene29873:intron | 30.0% | |
| TCAACCACACTTCTATATTA+TGG | - | chr3.3:38482920-38482939 | None:intergenic | 30.0% | |
| TCAGTCAATCACATACATTT+AGG | - | chr3.3:38483215-38483234 | None:intergenic | 30.0% | |
| TGACTGAATTATAGAATGGT+AGG | + | chr3.3:38483228-38483247 | MS.gene29873:intron | 30.0% | |
| TGATTAGGTACTTAACTACT+TGG | + | chr3.3:38482605-38482624 | MS.gene29873:intron | 30.0% | |
| TGTTCAATTGAGCTATTGAA+GGG | + | chr3.3:38482128-38482147 | MS.gene29873:CDS | 30.0% | |
| TTGATGCAATCATTGATCTT+GGG | + | chr3.3:38482069-38482088 | MS.gene29873:CDS | 30.0% | |
| TTTCCACTTCTTTGCTAATA+TGG | - | chr3.3:38481386-38481405 | None:intergenic | 30.0% | |
| ! | TCATTGTTTTCCTTGAAACA+TGG | - | chr3.3:38482550-38482569 | None:intergenic | 30.0% |
| !!! | CTCATGTATACGGAATTTTT+TGG | + | chr3.3:38480856-38480875 | MS.gene29873:intron | 30.0% |
| !!! | GACTACAATGACTAGTTTTA+TGG | + | chr3.3:38482964-38482983 | MS.gene29873:intron | 30.0% |
| !!! | TTGCCTTGTTTTTCTGATTT+TGG | - | chr3.3:38481471-38481490 | None:intergenic | 30.0% |
| !!! | TTTTAGGTTCCTCATGTATA+CGG | + | chr3.3:38480846-38480865 | MS.gene29873:intron | 30.0% |
| !!! | TTTTTTGGGTAATCCTTTTG+TGG | + | chr3.3:38480871-38480890 | MS.gene29873:intron | 30.0% |
| AACCACAAACCACAATATCT+TGG | + | chr3.3:38481616-38481635 | MS.gene29873:CDS | 35.0% | |
| AATGTAAAACATACCACTCC+GGG | - | chr3.3:38482506-38482525 | None:intergenic | 35.0% | |
| AATTCCAACTCTTGTAAGAC+AGG | - | chr3.3:38481849-38481868 | None:intergenic | 35.0% | |
| AATTGCCTCTTAGATCTAGT+TGG | + | chr3.3:38481490-38481509 | MS.gene29873:CDS | 35.0% | |
| AATTTAGTGTGAAGTCTTGG+CGG | + | chr3.3:38480724-38480743 | MS.gene29873:intron | 35.0% | |
| AGAATCTTGAATTCAGTAGG+CGG | + | chr3.3:38483072-38483091 | MS.gene29873:intron | 35.0% | |
| AGCAATTTAGTGTGAAGTCT+TGG | + | chr3.3:38480721-38480740 | MS.gene29873:intron | 35.0% | |
| ATGATTAGTGACTTACCTGA+GGG | + | chr3.3:38481307-38481326 | MS.gene29873:CDS | 35.0% | |
| ATTCCAACTCTTGTAAGACA+GGG | - | chr3.3:38481848-38481867 | None:intergenic | 35.0% | |
| ATTTGACACATCTCTATGTG+TGG | + | chr3.3:38482402-38482421 | MS.gene29873:intron | 35.0% | |
| CAATGTCTTCAATTCAAGCT+AGG | - | chr3.3:38481766-38481785 | None:intergenic | 35.0% | |
| CCTCCAAAATCAGAAAAACA+AGG | + | chr3.3:38481465-38481484 | MS.gene29873:CDS | 35.0% | |
| CTAGCTTGAATTGAAGACAT+TGG | + | chr3.3:38481764-38481783 | MS.gene29873:intron | 35.0% | |
| CTTCCATATTAGCAAAGAAG+TGG | + | chr3.3:38481380-38481399 | MS.gene29873:CDS | 35.0% | |
| CTTGAAACATGGCAAATACA+AGG | - | chr3.3:38482539-38482558 | None:intergenic | 35.0% | |
| CTTGTATTTGCCATGTTTCA+AGG | + | chr3.3:38482537-38482556 | MS.gene29873:intron | 35.0% | |
| GAACAATACACCAAAATGGT+GGG | + | chr3.3:38481096-38481115 | MS.gene29873:intron | 35.0% | |
| GAACGTTAGTGCATTTGTAA+TGG | + | chr3.3:38482439-38482458 | MS.gene29873:intron | 35.0% | |
| GAATGTAAAACATACCACTC+CGG | - | chr3.3:38482507-38482526 | None:intergenic | 35.0% | |
| GATCAATGATTGCATCAACT+AGG | - | chr3.3:38482067-38482086 | None:intergenic | 35.0% | |
| GATGGTCAATTTCCTTAATG+TGG | - | chr3.3:38481919-38481938 | None:intergenic | 35.0% | |
| GTGTCTCAATTTCCACATTA+AGG | + | chr3.3:38481904-38481923 | MS.gene29873:intron | 35.0% | |
| GTGTTCAATTGAGCTATTGA+AGG | + | chr3.3:38482127-38482146 | MS.gene29873:CDS | 35.0% | |
| GTTGATGCAATCATTGATCT+TGG | + | chr3.3:38482068-38482087 | MS.gene29873:CDS | 35.0% | |
| TAAGACACACAAGAAACCAA+GGG | - | chr3.3:38480940-38480959 | None:intergenic | 35.0% | |
| TAAGATCCAACGACATAATG+TGG | + | chr3.3:38481270-38481289 | MS.gene29873:CDS | 35.0% | |
| TATGATTAGTGACTTACCTG+AGG | + | chr3.3:38481306-38481325 | MS.gene29873:CDS | 35.0% | |
| TCACAAATCATGTCAAGCTT+TGG | - | chr3.3:38483044-38483063 | None:intergenic | 35.0% | |
| TCATATTCCACACAGAAACT+GGG | - | chr3.3:38483395-38483414 | None:intergenic | 35.0% | |
| TCTTCGAAAGACTCCTAAAT+TGG | + | chr3.3:38482466-38482485 | MS.gene29873:intron | 35.0% | |
| TGAAAGAGGAGTGATTACAA+AGG | - | chr3.3:38480917-38480936 | None:intergenic | 35.0% | |
| TGGAAATTGAGACACTAATC+TGG | - | chr3.3:38481899-38481918 | None:intergenic | 35.0% | |
| TGTAAAATGTAGGAAGAGGA+AGG | - | chr3.3:38482382-38482401 | None:intergenic | 35.0% | |
| TGTCTTACAAGAGTTGGAAT+TGG | + | chr3.3:38481848-38481867 | MS.gene29873:intron | 35.0% | |
| TTCAACAGTATGCTTAAGCA+TGG | + | chr3.3:38483306-38483325 | MS.gene29873:intron | 35.0% | |
| TTGCGAACAATACACCAAAA+TGG | + | chr3.3:38481092-38481111 | MS.gene29873:intron | 35.0% | |
| TTGGAAGATCTTACAATTCC+CGG | + | chr3.3:38482485-38482504 | MS.gene29873:intron | 35.0% | |
| ! | AATTGATGACACAACTTTCC+AGG | - | chr3.3:38482807-38482826 | None:intergenic | 35.0% |
| ! | ACTAGTCATTGTAGTCTTAC+TGG | - | chr3.3:38482960-38482979 | None:intergenic | 35.0% |
| ! | AGAGAAGATTTGAAACAGCA+CGG | - | chr3.3:38482660-38482679 | None:intergenic | 35.0% |
| ! | GATGCAGAGTATCCAATATA+TGG | - | chr3.3:38482358-38482377 | None:intergenic | 35.0% |
| ! | GTTTTCGGTTGGATTGTTTA+GGG | + | chr3.3:38480814-38480833 | MS.gene29873:intron | 35.0% |
| ! | TAATGGAGAGGAAGCTTTTA+GGG | + | chr3.3:38483283-38483302 | MS.gene29873:intron | 35.0% |
| ! | TTCTTGCAGCATCTTTTGTA+GGG | - | chr3.3:38481360-38481379 | None:intergenic | 35.0% |
| !! | ATAATGGAGAGGAAGCTTTT+AGG | + | chr3.3:38483282-38483301 | MS.gene29873:intron | 35.0% |
| !!! | CCTTGTTTTTCTGATTTTGG+AGG | - | chr3.3:38481468-38481487 | None:intergenic | 35.0% |
| !!! | CTGGTTTTTTTGGGCTTTTT+TGG | + | chr3.3:38480777-38480796 | MS.gene29873:intron | 35.0% |
| !!! | GCTGCTATTCTGGTTTTTTT+GGG | + | chr3.3:38480768-38480787 | MS.gene29873:intron | 35.0% |
| !!! | TGCTGCTATTCTGGTTTTTT+TGG | + | chr3.3:38480767-38480786 | MS.gene29873:intron | 35.0% |
| AACATGGCAAATACAAGGAC+TGG | - | chr3.3:38482534-38482553 | None:intergenic | 40.0% | |
| AATGATTGCATCAACTAGGG+AGG | - | chr3.3:38482063-38482082 | None:intergenic | 40.0% | |
| AGAATATACCTTCCACACCT+TGG | - | chr3.3:38483812-38483831 | None:intergenic | 40.0% | |
| AGTGAAAGGCCAAGATATTG+TGG | - | chr3.3:38481628-38481647 | None:intergenic | 40.0% | |
| AGTGTGAAGTACGGACATAA+TGG | + | chr3.3:38483266-38483285 | MS.gene29873:intron | 40.0% | |
| AGTGTTCCAACACTAAGCAT+TGG | - | chr3.3:38483338-38483357 | None:intergenic | 40.0% | |
| ATTGAACACTGAGCAGCATA+TGG | - | chr3.3:38482116-38482135 | None:intergenic | 40.0% | |
| ATTGAGCTATTGAAGGGACT+TGG | + | chr3.3:38482134-38482153 | MS.gene29873:CDS | 40.0% | |
| CAAAGAAGTGGAAACACTTG+TGG | + | chr3.3:38481392-38481411 | MS.gene29873:CDS | 40.0% | |
| CACTAAATTGCTCACCCAAA+AGG | - | chr3.3:38480713-38480732 | None:intergenic | 40.0% | |
| CAGAATAGCAGCAGAACAAA+GGG | - | chr3.3:38480760-38480779 | None:intergenic | 40.0% | |
| CATTTCGATCACCTAGTGAA+AGG | - | chr3.3:38481642-38481661 | None:intergenic | 40.0% | |
| CGAACAATACACCAAAATGG+TGG | + | chr3.3:38481095-38481114 | MS.gene29873:intron | 40.0% | |
| CTAGGGAAACAAATACCACT+AGG | - | chr3.3:38481748-38481767 | None:intergenic | 40.0% | |
| CTCATATTCCACACAGAAAC+TGG | - | chr3.3:38483396-38483415 | None:intergenic | 40.0% | |
| CTTTAGGCTAGTGTGAAGTA+CGG | + | chr3.3:38483257-38483276 | MS.gene29873:intron | 40.0% | |
| GAATGGTAGGTTAGGTCTTT+AGG | + | chr3.3:38483241-38483260 | MS.gene29873:intron | 40.0% | |
| GAGACATTTATCAGCTGATG+TGG | + | chr3.3:38482741-38482760 | MS.gene29873:intron | 40.0% | |
| GTAAGACACACAAGAAACCA+AGG | - | chr3.3:38480941-38480960 | None:intergenic | 40.0% | |
| GTCTTCCAACTAGATCTAAG+AGG | - | chr3.3:38481498-38481517 | None:intergenic | 40.0% | |
| TATATGCGGAACACCACAAA+AGG | - | chr3.3:38480887-38480906 | None:intergenic | 40.0% | |
| TCAACAGCTGTTATCTGTGT+TGG | + | chr3.3:38480603-38480622 | MS.gene29873:CDS | 40.0% | |
| TCGTTGGATCTTATGCACAT+CGG | - | chr3.3:38481263-38481282 | None:intergenic | 40.0% | |
| TCTACTCATGTTGAAAGGCT+TGG | + | chr3.3:38481529-38481548 | MS.gene29873:CDS | 40.0% | |
| TGTCATCCACATTATGTCGT+TGG | - | chr3.3:38481279-38481298 | None:intergenic | 40.0% | |
| TTCACTCTACACATTCCTAG+TGG | + | chr3.3:38481730-38481749 | MS.gene29873:CDS | 40.0% | |
| ! | AGGTGTGGAAGGTATATTCT+AGG | + | chr3.3:38483812-38483831 | MS.gene29873:CDS | 40.0% |
| ! | AGGTTTTCTATCGGCCTTTT+GGG | + | chr3.3:38480696-38480715 | MS.gene29873:intron | 40.0% |
| ! | ATACAGCTTCCAATTGGTTC+TGG | - | chr3.3:38482783-38482802 | None:intergenic | 40.0% |
| ! | ATTCTAGGAGGGGTAAGAAA+GGG | + | chr3.3:38483827-38483846 | MS.gene29873:CDS | 40.0% |
| ! | CAATATCTTGGCCTTTCACT+AGG | + | chr3.3:38481628-38481647 | MS.gene29873:CDS | 40.0% |
| ! | GGTAATGCAAGTTGAACTAG+AGG | + | chr3.3:38483451-38483470 | MS.gene29873:intron | 40.0% |
| ! | GGTTTTCGGTTGGATTGTTT+AGG | + | chr3.3:38480813-38480832 | MS.gene29873:intron | 40.0% |
| ! | GTGGAAGGTATATTCTAGGA+GGG | + | chr3.3:38483816-38483835 | MS.gene29873:CDS | 40.0% |
| ! | GTTCTTGCAGCATCTTTTGT+AGG | - | chr3.3:38481361-38481380 | None:intergenic | 40.0% |
| ! | TATTCTAGGAGGGGTAAGAA+AGG | + | chr3.3:38483826-38483845 | MS.gene29873:CDS | 40.0% |
| ! | TGGAAGGTATATTCTAGGAG+GGG | + | chr3.3:38483817-38483836 | MS.gene29873:CDS | 40.0% |
| ! | TGTGGAAGGTATATTCTAGG+AGG | + | chr3.3:38483815-38483834 | MS.gene29873:CDS | 40.0% |
| !! | TATTTTTGAGCAGGTAGCAC+AGG | + | chr3.3:38481213-38481232 | MS.gene29873:intron | 40.0% |
| !!! | TCTGTTTTTGCTGGTTTAGC+AGG | + | chr3.3:38480664-38480683 | MS.gene29873:intron | 40.0% |
| !!! | TTTAGGGACGGTTGGTTTTT+AGG | + | chr3.3:38480830-38480849 | MS.gene29873:intron | 40.0% |
| AATCACTCCTCTTTCACCCT+TGG | + | chr3.3:38480921-38480940 | MS.gene29873:intron | 45.0% | |
| AGATCTTACAATTCCCGGAG+TGG | + | chr3.3:38482490-38482509 | MS.gene29873:intron | 45.0% | |
| AGCGGAGATCTCATTTGCAA+AGG | - | chr3.3:38481805-38481824 | None:intergenic | 45.0% | |
| AGTATGCTTAAGCATGGCTC+CGG | + | chr3.3:38483312-38483331 | MS.gene29873:intron | 45.0% | |
| CAAGAAACCAAGGGTGAAAG+AGG | - | chr3.3:38480931-38480950 | None:intergenic | 45.0% | |
| CCAGAATAGCAGCAGAACAA+AGG | - | chr3.3:38480761-38480780 | None:intergenic | 45.0% | |
| CCCAGAGAAAAGTTGTTGAG+CGG | - | chr3.3:38481823-38481842 | None:intergenic | 45.0% | |
| CCTTTGTTCTGCTGCTATTC+TGG | + | chr3.3:38480758-38480777 | MS.gene29873:intron | 45.0% | |
| GCAATCATTGATCTTGGGTG+CGG | + | chr3.3:38482074-38482093 | MS.gene29873:CDS | 45.0% | |
| GCAGCATATGGTTCATCATG+TGG | - | chr3.3:38482104-38482123 | None:intergenic | 45.0% | |
| GGATGATGTCCAGAACCAAT+TGG | + | chr3.3:38482771-38482790 | MS.gene29873:CDS | 45.0% | |
| GGCCAAGATATTGTGGTTTG+TGG | - | chr3.3:38481621-38481640 | None:intergenic | 45.0% | |
| GTTGTTGTCACGTGACTGAA+AGG | + | chr3.3:38481018-38481037 | MS.gene29873:intron | 45.0% | |
| TCCAACCGAAAACCAAGTTC+CGG | - | chr3.3:38480807-38480826 | None:intergenic | 45.0% | |
| TCGAAAGCAGCGAAACTATG+TGG | - | chr3.3:38481679-38481698 | None:intergenic | 45.0% | |
| TCGGTTGGATTGTTTAGGGA+CGG | + | chr3.3:38480818-38480837 | MS.gene29873:intron | 45.0% | |
| TGATTCATCAGGGGTCAAGT+GGG | + | chr3.3:38483785-38483804 | MS.gene29873:CDS | 45.0% | |
| TTGGATTGTTTAGGGACGGT+TGG | + | chr3.3:38480822-38480841 | MS.gene29873:intron | 45.0% | |
| TTGTGTGTCTTACACAAGCG+AGG | + | chr3.3:38480948-38480967 | MS.gene29873:intron | 45.0% | |
| ! | CAGCTGTTATCTGTGTTGGT+AGG | + | chr3.3:38480607-38480626 | MS.gene29873:CDS | 45.0% |
| ! | CAGGTTTTCTATCGGCCTTT+TGG | + | chr3.3:38480695-38480714 | MS.gene29873:intron | 45.0% |
| ! | CCGCTCAACAACTTTTCTCT+GGG | + | chr3.3:38481820-38481839 | MS.gene29873:intron | 45.0% |
| ! | GAAGTACGGACATAATGGAG+AGG | + | chr3.3:38483271-38483290 | MS.gene29873:intron | 45.0% |
| ! | TCCGCTCAACAACTTTTCTC+TGG | + | chr3.3:38481819-38481838 | MS.gene29873:intron | 45.0% |
| ! | TGTGGTGGCAGGTTTTCTAT+CGG | + | chr3.3:38480687-38480706 | MS.gene29873:intron | 45.0% |
| !! | TGCACATCGGTTGATGAGAT+TGG | - | chr3.3:38481250-38481269 | None:intergenic | 45.0% |
| !! | TTCCAACACTAAGCATTGGC+CGG | - | chr3.3:38483334-38483353 | None:intergenic | 45.0% |
| !!! | TTTGGGCTTTTTTGGTGCTC+CGG | + | chr3.3:38480785-38480804 | MS.gene29873:intron | 45.0% |
| !!! | TTTTGCTGGTTTAGCAGGTG+TGG | + | chr3.3:38480669-38480688 | MS.gene29873:intron | 45.0% |
| !!! | TTTTTTGGTGCTCCGGAACT+TGG | + | chr3.3:38480792-38480811 | MS.gene29873:intron | 45.0% |
| AATGCACCAAAGCAGGTCTG+GGG | - | chr3.3:38481128-38481147 | None:intergenic | 50.0% | |
| ACTAGGGAGGTCAGGTTAAC+AGG | - | chr3.3:38482050-38482069 | None:intergenic | 50.0% | |
| AGGAGGGGTAAGAAAGGGAA+TGG | + | chr3.3:38483832-38483851 | MS.gene29873:CDS | 50.0% | |
| AGGGGTAAGAAAGGGAATGG+TGG | + | chr3.3:38483835-38483854 | MS.gene29873:CDS | 50.0% | |
| ATACGAAGAAGAACGCCCTC+AGG | - | chr3.3:38481325-38481344 | None:intergenic | 50.0% | |
| ATCAGCTGATGTGGAGAAGC+TGG | + | chr3.3:38482750-38482769 | MS.gene29873:intron | 50.0% | |
| CAATGCACCAAAGCAGGTCT+GGG | - | chr3.3:38481129-38481148 | None:intergenic | 50.0% | |
| CCAATTGGAAGCTGTATGCC+TGG | + | chr3.3:38482786-38482805 | MS.gene29873:CDS | 50.0% | |
| CCAGGCATACAGCTTCCAAT+TGG | - | chr3.3:38482789-38482808 | None:intergenic | 50.0% | |
| CTAGGGAGGTCAGGTTAACA+GGG | - | chr3.3:38482049-38482068 | None:intergenic | 50.0% | |
| CTGATTCATCAGGGGTCAAG+TGG | + | chr3.3:38483784-38483803 | MS.gene29873:CDS | 50.0% | |
| CTTGACCCCTGATGAATCAG+CGG | - | chr3.3:38483784-38483803 | None:intergenic | 50.0% | |
| GTGCCCTGTCTTACAAGAGT+TGG | + | chr3.3:38481842-38481861 | MS.gene29873:intron | 50.0% | |
| TTGCATCAACTAGGGAGGTC+AGG | - | chr3.3:38482058-38482077 | None:intergenic | 50.0% | |
| ! | CAGACCTGCTTTGGTGCATT+GGG | + | chr3.3:38481128-38481147 | MS.gene29873:intron | 50.0% |
| !! | GTGCTCCGGAACTTGGTTTT+CGG | + | chr3.3:38480799-38480818 | MS.gene29873:intron | 50.0% |
| !! | TCCGGAACTTGGTTTTCGGT+TGG | + | chr3.3:38480803-38480822 | MS.gene29873:intron | 50.0% |
| !!! | CAGCTGCTGGTTTTGTGGTT+CGG | + | chr3.3:38480637-38480656 | MS.gene29873:CDS | 50.0% |
| !!! | TGCTGGTTTTGTGGTTCGGA+CGG | + | chr3.3:38480641-38480660 | MS.gene29873:CDS | 50.0% |
| !!! | TTCGGACGGTCTGTTTTTGC+TGG | + | chr3.3:38480655-38480674 | MS.gene29873:intron | 50.0% |
| AAGTGGGTCCAAGGTGTGGA+AGG | + | chr3.3:38483801-38483820 | MS.gene29873:CDS | 55.0% | |
| ACCAAAGCAGGTCTGGGGAA+GGG | - | chr3.3:38481123-38481142 | None:intergenic | 55.0% | |
| CAGGTAGCACAGGTCATGGT+TGG | + | chr3.3:38481223-38481242 | MS.gene29873:intron | 55.0% | |
| CCAATGCACCAAAGCAGGTC+TGG | - | chr3.3:38481130-38481149 | None:intergenic | 55.0% | |
| CTCCGGCCAATGCTTAGTGT+TGG | + | chr3.3:38483329-38483348 | MS.gene29873:intron | 55.0% | |
| TGAGCAGGTAGCACAGGTCA+TGG | + | chr3.3:38481219-38481238 | MS.gene29873:intron | 55.0% | |
| TGATGAATCAGCGGCTCACG+TGG | - | chr3.3:38483775-38483794 | None:intergenic | 55.0% | |
| ! | CCAGACCTGCTTTGGTGCAT+TGG | + | chr3.3:38481127-38481146 | MS.gene29873:intron | 55.0% |
| !! | ACGTGAGCCGCTGATTCATC+AGG | + | chr3.3:38483774-38483793 | MS.gene29873:CDS | 55.0% |
| !! | CGTGAGCCGCTGATTCATCA+GGG | + | chr3.3:38483775-38483794 | MS.gene29873:CDS | 55.0% |
| !! | GTGAGCCGCTGATTCATCAG+GGG | + | chr3.3:38483776-38483795 | MS.gene29873:CDS | 55.0% |
| !! | TGCTGGTTTAGCAGGTGTGG+TGG | + | chr3.3:38480672-38480691 | MS.gene29873:intron | 55.0% |
| !!! | GCTGTCAGCTGCTGGTTTTG+TGG | + | chr3.3:38480632-38480651 | MS.gene29873:CDS | 55.0% |
| ACCCTTCCCCAGACCTGCTT+TGG | + | chr3.3:38481119-38481138 | MS.gene29873:intron | 60.0% | |
| CACCAAAGCAGGTCTGGGGA+AGG | - | chr3.3:38481124-38481143 | None:intergenic | 60.0% | |
| CGTGCGTCCCAGTTTCTGTG+TGG | + | chr3.3:38483385-38483404 | MS.gene29873:intron | 60.0% | |
| GCAGCCCAATGCACCAAAGC+AGG | - | chr3.3:38481135-38481154 | None:intergenic | 60.0% | |
| GGTCAAGTGGGTCCAAGGTG+TGG | + | chr3.3:38483797-38483816 | MS.gene29873:CDS | 60.0% | |
| GGTTTAGCAGGTGTGGTGGC+AGG | + | chr3.3:38480676-38480695 | MS.gene29873:intron | 60.0% | |
| TCACGTGGCATTCCTGCAGC+TGG | - | chr3.3:38483760-38483779 | None:intergenic | 60.0% | |
| TCAGGGGTCAAGTGGGTCCA+AGG | + | chr3.3:38483792-38483811 | MS.gene29873:CDS | 60.0% | |
| ! | GGGGAAGGGTCCCACCATTT+TGG | - | chr3.3:38481109-38481128 | None:intergenic | 60.0% |
| GACAGGACTCAGCCAGCTGC+AGG | + | chr3.3:38483745-38483764 | MS.gene29873:intron | 65.0% | |
| GGTAGGCTGCTGTCAGCTGC+TGG | + | chr3.3:38480624-38480643 | MS.gene29873:CDS | 65.0% | |
| TCTAGCGTGCGAGCGCATGG+TGG | - | chr3.3:38483141-38483160 | None:intergenic | 65.0% | |
| TGCTCTAGCGTGCGAGCGCA+TGG | - | chr3.3:38483144-38483163 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 38480594 | 38483861 | 38480594 | ID=MS.gene29873 |
| chr3.3 | mRNA | 38480594 | 38483861 | 38480594 | ID=MS.gene29873.t1;Parent=MS.gene29873 |
| chr3.3 | exon | 38480594 | 38480662 | 38480594 | ID=MS.gene29873.t1.exon1;Parent=MS.gene29873.t1 |
| chr3.3 | CDS | 38480594 | 38480662 | 38480594 | ID=cds.MS.gene29873.t1;Parent=MS.gene29873.t1 |
| chr3.3 | exon | 38481226 | 38481751 | 38481226 | ID=MS.gene29873.t1.exon2;Parent=MS.gene29873.t1 |
| chr3.3 | CDS | 38481226 | 38481751 | 38481226 | ID=cds.MS.gene29873.t1;Parent=MS.gene29873.t1 |
| chr3.3 | exon | 38481961 | 38482155 | 38481961 | ID=MS.gene29873.t1.exon3;Parent=MS.gene29873.t1 |
| chr3.3 | CDS | 38481961 | 38482155 | 38481961 | ID=cds.MS.gene29873.t1;Parent=MS.gene29873.t1 |
| chr3.3 | exon | 38482755 | 38482830 | 38482755 | ID=MS.gene29873.t1.exon4;Parent=MS.gene29873.t1 |
| chr3.3 | CDS | 38482755 | 38482830 | 38482755 | ID=cds.MS.gene29873.t1;Parent=MS.gene29873.t1 |
| chr3.3 | exon | 38483750 | 38483861 | 38483750 | ID=MS.gene29873.t1.exon5;Parent=MS.gene29873.t1 |
| chr3.3 | CDS | 38483750 | 38483861 | 38483750 | ID=cds.MS.gene29873.t1;Parent=MS.gene29873.t1 |
| Gene Sequence |
| Protein sequence |
