Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93058.t1 | XP_013446224.1 | 98.4 | 315 | 5 | 0 | 1 | 315 | 1 | 315 | 3.20E-182 | 647.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93058.t1 | Q0PGJ6 | 77.8 | 315 | 70 | 0 | 1 | 315 | 1 | 315 | 3.0e-149 | 529.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93058.t1 | I3SWZ2 | 98.4 | 315 | 5 | 0 | 1 | 315 | 1 | 315 | 2.3e-182 | 647.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049251 | MS.gene93058 | 0.811342 | 7.35E-51 | -1.69E-46 |
MS.gene049298 | MS.gene93058 | 0.808773 | 2.63E-50 | -1.69E-46 |
MS.gene050710 | MS.gene93058 | 0.805225 | 1.48E-49 | -1.69E-46 |
MS.gene050874 | MS.gene93058 | 0.829652 | 4.57E-55 | -1.69E-46 |
MS.gene050875 | MS.gene93058 | 0.867165 | 1.67E-65 | -1.69E-46 |
MS.gene051439 | MS.gene93058 | 0.812818 | 3.50E-51 | -1.69E-46 |
MS.gene051914 | MS.gene93058 | 0.86786 | 1.00E-65 | -1.69E-46 |
MS.gene052169 | MS.gene93058 | 0.815526 | 8.84E-52 | -1.69E-46 |
MS.gene052209 | MS.gene93058 | 0.81127 | 7.62E-51 | -1.69E-46 |
MS.gene052308 | MS.gene93058 | 0.826534 | 2.57E-54 | -1.69E-46 |
MS.gene053173 | MS.gene93058 | 0.832791 | 7.73E-56 | -1.69E-46 |
MS.gene054018 | MS.gene93058 | 0.816336 | 5.83E-52 | -1.69E-46 |
MS.gene054459 | MS.gene93058 | 0.804242 | 2.37E-49 | -1.69E-46 |
MS.gene054551 | MS.gene93058 | 0.837696 | 4.46E-57 | -1.69E-46 |
MS.gene054593 | MS.gene93058 | 0.840536 | 8.20E-58 | -1.69E-46 |
MS.gene054633 | MS.gene93058 | 0.837941 | 3.86E-57 | -1.69E-46 |
MS.gene054662 | MS.gene93058 | 0.881607 | 2.09E-70 | -1.69E-46 |
MS.gene054941 | MS.gene93058 | 0.818311 | 2.09E-52 | -1.69E-46 |
MS.gene055308 | MS.gene93058 | 0.817769 | 2.78E-52 | -1.69E-46 |
MS.gene055578 | MS.gene93058 | 0.801032 | 1.09E-48 | -1.69E-46 |
MS.gene056041 | MS.gene93058 | 0.806997 | 6.27E-50 | -1.69E-46 |
MS.gene056387 | MS.gene93058 | -0.823675 | 1.22E-53 | -1.69E-46 |
MS.gene05640 | MS.gene93058 | 0.850465 | 1.67E-60 | -1.69E-46 |
MS.gene056488 | MS.gene93058 | 0.807521 | 4.85E-50 | -1.69E-46 |
MS.gene056528 | MS.gene93058 | 0.802502 | 5.44E-49 | -1.69E-46 |
MS.gene05652 | MS.gene93058 | 0.859032 | 5.48E-63 | -1.69E-46 |
MS.gene05732 | MS.gene93058 | 0.829764 | 4.29E-55 | -1.69E-46 |
MS.gene057367 | MS.gene93058 | 0.861058 | 1.34E-63 | -1.69E-46 |
MS.gene057669 | MS.gene93058 | 0.83031 | 3.16E-55 | -1.69E-46 |
MS.gene057717 | MS.gene93058 | 0.802745 | 4.85E-49 | -1.69E-46 |
MS.gene058128 | MS.gene93058 | 0.825073 | 5.72E-54 | -1.69E-46 |
MS.gene058849 | MS.gene93058 | 0.800957 | 1.13E-48 | -1.69E-46 |
MS.gene058853 | MS.gene93058 | 0.818496 | 1.90E-52 | -1.69E-46 |
MS.gene05926 | MS.gene93058 | 0.842749 | 2.14E-58 | -1.69E-46 |
MS.gene059553 | MS.gene93058 | 0.80723 | 5.59E-50 | -1.69E-46 |
MS.gene059616 | MS.gene93058 | 0.822127 | 2.80E-53 | -1.69E-46 |
MS.gene060291 | MS.gene93058 | 0.818755 | 1.66E-52 | -1.69E-46 |
MS.gene06080 | MS.gene93058 | 0.811393 | 7.16E-51 | -1.69E-46 |
MS.gene06093 | MS.gene93058 | 0.853327 | 2.57E-61 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93058.t1 | MTR_8g070115 | 98.413 | 315 | 5 | 0 | 1 | 315 | 1 | 315 | 0.0 | 643 |
MS.gene93058.t1 | MTR_8g070095 | 82.866 | 321 | 47 | 3 | 1 | 315 | 1 | 319 | 0.0 | 550 |
MS.gene93058.t1 | MTR_4g021350 | 71.429 | 315 | 88 | 1 | 1 | 315 | 1 | 313 | 1.10e-163 | 458 |
MS.gene93058.t1 | MTR_4g021350 | 73.171 | 287 | 75 | 1 | 1 | 287 | 1 | 285 | 1.16e-148 | 419 |
MS.gene93058.t1 | MTR_4g021450 | 68.371 | 313 | 88 | 2 | 2 | 314 | 3 | 304 | 3.03e-148 | 419 |
MS.gene93058.t1 | MTR_4g021410 | 67.412 | 313 | 91 | 2 | 2 | 314 | 3 | 304 | 2.18e-145 | 411 |
MS.gene93058.t1 | MTR_7g063580 | 65.161 | 310 | 107 | 1 | 6 | 315 | 46 | 354 | 1.20e-140 | 401 |
MS.gene93058.t1 | MTR_4g021410 | 68.116 | 276 | 77 | 2 | 39 | 314 | 3 | 267 | 3.27e-127 | 364 |
MS.gene93058.t1 | MTR_4g021450 | 67.364 | 239 | 67 | 2 | 76 | 314 | 1 | 228 | 1.11e-104 | 305 |
MS.gene93058.t1 | MTR_4g021410 | 66.946 | 239 | 68 | 2 | 76 | 314 | 1 | 228 | 1.91e-103 | 302 |
MS.gene93058.t1 | MTR_4g072320 | 45.631 | 309 | 161 | 4 | 10 | 315 | 11 | 315 | 2.70e-90 | 272 |
MS.gene93058.t1 | MTR_4g021450 | 66.667 | 189 | 59 | 1 | 126 | 314 | 1 | 185 | 2.20e-89 | 265 |
MS.gene93058.t1 | MTR_4g036845 | 42.633 | 319 | 172 | 5 | 2 | 315 | 3 | 315 | 7.75e-89 | 268 |
MS.gene93058.t1 | MTR_4g072350 | 43.711 | 318 | 172 | 4 | 3 | 314 | 4 | 320 | 6.90e-84 | 256 |
MS.gene93058.t1 | MTR_4g072360 | 43.408 | 311 | 169 | 5 | 10 | 314 | 11 | 320 | 2.15e-81 | 249 |
MS.gene93058.t1 | MTR_7g070500 | 44.586 | 314 | 167 | 5 | 4 | 314 | 11 | 320 | 2.98e-79 | 244 |
MS.gene93058.t1 | MTR_6g073110 | 39.482 | 309 | 180 | 4 | 10 | 312 | 11 | 318 | 5.74e-77 | 238 |
MS.gene93058.t1 | MTR_0374s0050 | 39.414 | 307 | 171 | 4 | 14 | 314 | 18 | 315 | 9.94e-76 | 235 |
MS.gene93058.t1 | MTR_7g070500 | 44.876 | 283 | 151 | 3 | 4 | 285 | 11 | 289 | 1.03e-71 | 224 |
MS.gene93058.t1 | MTR_3g083130 | 40.328 | 305 | 168 | 5 | 15 | 314 | 20 | 315 | 1.50e-70 | 221 |
MS.gene93058.t1 | MTR_5g097910 | 41.837 | 294 | 160 | 4 | 9 | 295 | 13 | 302 | 2.97e-64 | 205 |
MS.gene93058.t1 | MTR_5g097940 | 41.837 | 294 | 160 | 4 | 9 | 295 | 13 | 302 | 2.97e-64 | 205 |
MS.gene93058.t1 | MTR_5g097900 | 41.837 | 294 | 160 | 4 | 9 | 295 | 13 | 302 | 3.30e-64 | 205 |
MS.gene93058.t1 | MTR_4g072060 | 40.426 | 282 | 154 | 4 | 8 | 277 | 3 | 282 | 2.02e-63 | 203 |
MS.gene93058.t1 | MTR_6g072650 | 40.000 | 150 | 67 | 2 | 165 | 314 | 10 | 136 | 2.18e-31 | 115 |
MS.gene93058.t1 | MTR_6g072710 | 40.541 | 111 | 66 | 0 | 183 | 293 | 1 | 111 | 2.27e-24 | 95.9 |
MS.gene93058.t1 | MTR_4g021425 | 50.000 | 58 | 29 | 0 | 249 | 306 | 1 | 58 | 1.87e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93058.t1 | AT2G37770 | 77.778 | 315 | 70 | 0 | 1 | 315 | 1 | 315 | 0.0 | 524 |
MS.gene93058.t1 | AT2G37790 | 77.143 | 315 | 71 | 1 | 1 | 315 | 1 | 314 | 0.0 | 510 |
MS.gene93058.t1 | AT3G53880 | 71.429 | 315 | 90 | 0 | 1 | 315 | 1 | 315 | 2.55e-167 | 468 |
MS.gene93058.t1 | AT2G37760 | 66.667 | 315 | 101 | 1 | 1 | 315 | 1 | 311 | 4.13e-157 | 441 |
MS.gene93058.t1 | AT2G37760 | 66.667 | 315 | 101 | 1 | 1 | 315 | 1 | 311 | 4.13e-157 | 441 |
MS.gene93058.t1 | AT3G53880 | 71.528 | 288 | 82 | 0 | 1 | 288 | 1 | 288 | 7.34e-151 | 426 |
MS.gene93058.t1 | AT2G37760 | 67.698 | 291 | 90 | 1 | 1 | 291 | 1 | 287 | 6.57e-145 | 410 |
MS.gene93058.t1 | AT2G37760 | 67.698 | 291 | 90 | 1 | 1 | 291 | 1 | 287 | 6.57e-145 | 410 |
MS.gene93058.t1 | AT2G37760 | 68.166 | 289 | 88 | 1 | 1 | 289 | 1 | 285 | 1.46e-144 | 409 |
MS.gene93058.t1 | AT2G37760 | 66.923 | 260 | 86 | 0 | 56 | 315 | 6 | 265 | 8.18e-129 | 368 |
MS.gene93058.t1 | AT2G37760 | 66.923 | 260 | 86 | 0 | 56 | 315 | 6 | 265 | 8.18e-129 | 368 |
MS.gene93058.t1 | AT2G37770 | 75.229 | 218 | 53 | 1 | 1 | 217 | 1 | 218 | 3.13e-118 | 342 |
MS.gene93058.t1 | AT5G01670 | 46.129 | 310 | 160 | 5 | 8 | 314 | 16 | 321 | 9.49e-90 | 271 |
MS.gene93058.t1 | AT5G62420 | 45.016 | 311 | 164 | 4 | 10 | 315 | 8 | 316 | 2.06e-89 | 270 |
MS.gene93058.t1 | AT5G01670 | 42.433 | 337 | 160 | 6 | 8 | 314 | 16 | 348 | 9.13e-84 | 256 |
MS.gene93058.t1 | AT1G59960 | 40.909 | 308 | 172 | 7 | 16 | 315 | 21 | 326 | 9.18e-72 | 225 |
MS.gene93058.t1 | AT2G21250 | 41.135 | 282 | 152 | 4 | 8 | 277 | 3 | 282 | 2.46e-71 | 223 |
MS.gene93058.t1 | AT2G21260 | 38.411 | 302 | 171 | 5 | 8 | 296 | 3 | 302 | 1.84e-68 | 216 |
MS.gene93058.t1 | AT1G59950 | 42.532 | 308 | 167 | 7 | 16 | 315 | 15 | 320 | 4.13e-68 | 215 |
MS.gene93058.t1 | AT2G21250 | 41.981 | 212 | 112 | 2 | 8 | 210 | 3 | 212 | 3.95e-54 | 177 |
MS.gene93058.t1 | AT2G21260 | 34.934 | 229 | 134 | 5 | 81 | 296 | 8 | 234 | 9.39e-40 | 140 |
MS.gene93058.t1 | AT1G06690 | 26.032 | 315 | 164 | 15 | 15 | 277 | 57 | 354 | 1.18e-14 | 74.3 |
Find 96 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGTGAAACGCGAAGATTTA+TGG | 0.183771 | 8.2:+32696700 | MS.gene93058:CDS |
CCTTGCTTCATTTGTACTCT+TGG | 0.238563 | 8.2:-32698553 | None:intergenic |
TCATTTGTTCATGAAACTTA+TGG | 0.293075 | 8.2:+32699039 | MS.gene93058:CDS |
AAGTGGAATGCCATCCTTCC+TGG | 0.316899 | 8.2:+32698154 | MS.gene93058:CDS |
CTTTGAAGCCAGGTTGTTCC+AGG | 0.323565 | 8.2:-32698423 | None:intergenic |
ATTGATTGTGCTCAAGTCTA+TGG | 0.334419 | 8.2:+32696544 | MS.gene93058:CDS |
CCAGTTCTTAATATGATTGC+TGG | 0.336431 | 8.2:+32698462 | MS.gene93058:CDS |
CAGATCTGTTGAAGAACTTT+GGG | 0.345765 | 8.2:+32699068 | MS.gene93058:CDS |
GTTTAGGGATATTCACCTTT+GGG | 0.352925 | 8.2:+32698396 | MS.gene93058:intron |
TGAAACAAACCAGAGTTTAG+AGG | 0.353779 | 8.2:-32696727 | None:intergenic |
CTTGCTTCATTTGTACTCTT+GGG | 0.358576 | 8.2:-32698552 | None:intergenic |
TTCCATGTGCTGGCTAAGTT+AGG | 0.363519 | 8.2:-32698015 | None:intergenic |
TTCCATTGCCTTCCATGTGC+TGG | 0.365867 | 8.2:-32698025 | None:intergenic |
TCTTCGCTGGGGATTGCAAA+TGG | 0.374689 | 8.2:+32698515 | MS.gene93058:CDS |
AATGCTAGTGGTACATCTTC+TGG | 0.376017 | 8.2:-32697032 | None:intergenic |
TGCTCAGGTATCTCTTCGCT+GGG | 0.384369 | 8.2:+32698503 | MS.gene93058:CDS |
CTTCCGTCGGCTTAGGTACC+TGG | 0.387822 | 8.2:+32696345 | MS.gene93058:CDS |
TGTTTAGGGATATTCACCTT+TGG | 0.389463 | 8.2:+32698395 | MS.gene93058:intron |
AATTTCTCTTCCAAGAAGTT+GGG | 0.392264 | 8.2:+32698090 | MS.gene93058:CDS |
CTGCTCAGGTATCTCTTCGC+TGG | 0.394392 | 8.2:+32698502 | MS.gene93058:CDS |
ACAGATCTGTTGAAGAACTT+TGG | 0.394762 | 8.2:+32699067 | MS.gene93058:CDS |
CAATTTCTCTTCCAAGAAGT+TGG | 0.394997 | 8.2:+32698089 | MS.gene93058:CDS |
TACAGAGAGGTGGACACCTT+TGG | 0.404335 | 8.2:-32698208 | None:intergenic |
AATTTAGCAAACAAGTCTTC+AGG | 0.406773 | 8.2:-32698612 | None:intergenic |
TCAGGCAAGGCACGGGCTAT+AGG | 0.418687 | 8.2:+32698060 | MS.gene93058:CDS |
AATATGATTGCTGGGAAACT+AGG | 0.422619 | 8.2:+32698471 | MS.gene93058:CDS |
TAAGCCGACGGAAGGGATCT+TGG | 0.423343 | 8.2:-32696336 | None:intergenic |
AAGATCCCTTCCGTCGGCTT+AGG | 0.429377 | 8.2:+32696338 | MS.gene93058:CDS |
CCAGCAATCATATTAAGAAC+TGG | 0.429401 | 8.2:-32698462 | None:intergenic |
TATTCACCTTTGGGTTCCCC+TGG | 0.441850 | 8.2:+32698405 | MS.gene93058:CDS |
GGTACCTGGCAGTCCGATCC+TGG | 0.444341 | 8.2:+32696359 | MS.gene93058:CDS |
GATCCTTTCTTCATCGGAGC+AGG | 0.456423 | 8.2:-32697961 | None:intergenic |
AACCTTGATGGCGGCAGCGA+CGG | 0.457426 | 8.2:-32696396 | None:intergenic |
GATGAGGTGGTGAACCTTGA+TGG | 0.460646 | 8.2:-32696408 | None:intergenic |
CTTCGCTGGGGATTGCAAAT+GGG | 0.464158 | 8.2:+32698516 | MS.gene93058:CDS |
ACGGCTTGAGCGACGAGGCC+AGG | 0.466947 | 8.2:-32696377 | None:intergenic |
TGGGTTCCCCTGGAACAACC+TGG | 0.482642 | 8.2:+32698415 | MS.gene93058:CDS |
ATGCCATCCTTCCTGGAGGC+AGG | 0.488471 | 8.2:+32698161 | MS.gene93058:CDS |
GACGGAAGGGATCTTGGCTC+CGG | 0.493320 | 8.2:-32696330 | None:intergenic |
AGCCGTCGCTGCCGCCATCA+AGG | 0.501675 | 8.2:+32696394 | MS.gene93058:CDS |
ACGCAGCTTGTCCTGCCTCC+AGG | 0.505501 | 8.2:-32698172 | None:intergenic |
AATGACATCACTTTGAAGCC+AGG | 0.508613 | 8.2:-32698433 | None:intergenic |
GTTTCAGGCAAGATTACTCC+GGG | 0.509685 | 8.2:+32699011 | MS.gene93058:intron |
CAGCGAAGAGATACCTGAGC+AGG | 0.517340 | 8.2:-32698501 | None:intergenic |
TGGCCTGCTCCGATGAAGAA+AGG | 0.522104 | 8.2:+32697958 | MS.gene93058:CDS |
CCTACTGATCCTTTCTTCAT+CGG | 0.525903 | 8.2:-32697967 | None:intergenic |
CAGTTCTTAATATGATTGCT+GGG | 0.533432 | 8.2:+32698463 | MS.gene93058:CDS |
TGTCCTGCCTCCAGGAAGGA+TGG | 0.536506 | 8.2:-32698164 | None:intergenic |
TCCTCCTGCTGTCAATCAAG+TGG | 0.537498 | 8.2:+32698137 | MS.gene93058:CDS |
ATGGAAACACTCTATGACTC+AGG | 0.543898 | 8.2:+32698042 | MS.gene93058:CDS |
AGAAGATGTACCACTAGCAT+TGG | 0.544022 | 8.2:+32697034 | MS.gene93058:CDS |
ACTAGGCAAGACTCCTGCTC+AGG | 0.544102 | 8.2:+32698488 | MS.gene93058:CDS |
GAGGCCAGGATCGGACTGCC+AGG | 0.544147 | 8.2:-32696363 | None:intergenic |
CATTCCACTTGATTGACAGC+AGG | 0.544893 | 8.2:-32698141 | None:intergenic |
TGTTTCAGGCAAGATTACTC+CGG | 0.546358 | 8.2:+32699010 | MS.gene93058:intron |
ATTTCTCTTCCAAGAAGTTG+GGG | 0.553939 | 8.2:+32698091 | MS.gene93058:CDS |
TTGAAGAAATTGTTTAACGA+AGG | 0.558496 | 8.2:+32696675 | MS.gene93058:CDS |
TATGGATTACCTCTAAACTC+TGG | 0.558925 | 8.2:+32696718 | MS.gene93058:CDS |
TCTTCATCGGAGCAGGCCAG+TGG | 0.569231 | 8.2:-32697954 | None:intergenic |
CGTGATTTCTGTAATTCCAA+AGG | 0.569400 | 8.2:+32698192 | MS.gene93058:CDS |
GTTAAACAATTTCTTCAACA+TGG | 0.570607 | 8.2:-32696670 | None:intergenic |
ATGTACCACTAGCATTGGAC+AGG | 0.570702 | 8.2:+32697039 | MS.gene93058:CDS |
TTGAGCGACGAGGCCAGGAT+CGG | 0.573245 | 8.2:-32696372 | None:intergenic |
CAGGTACCTAAGCCGACGGA+AGG | 0.573373 | 8.2:-32696344 | None:intergenic |
TCTATGACTCAGGCAAGGCA+CGG | 0.574646 | 8.2:+32698052 | MS.gene93058:CDS |
TTTGTTCATGAAACTTATGG+TGG | 0.577376 | 8.2:+32699042 | MS.gene93058:CDS |
CTATGACTCAGGCAAGGCAC+GGG | 0.584856 | 8.2:+32698053 | MS.gene93058:CDS |
TAACTTAGCCAGCACATGGA+AGG | 0.589109 | 8.2:+32698017 | MS.gene93058:CDS |
ATAAGTTTCATGAACAAATG+AGG | 0.589589 | 8.2:-32699037 | None:intergenic |
TCCACTTGATTGACAGCAGG+AGG | 0.589599 | 8.2:-32698138 | None:intergenic |
TTTGAAGCCAGGTTGTTCCA+GGG | 0.593768 | 8.2:-32698422 | None:intergenic |
TTGAAGCCAGGTTGTTCCAG+GGG | 0.595459 | 8.2:-32698421 | None:intergenic |
CGATTCTTCAATCTCAACAC+CGG | 0.603511 | 8.2:+32696311 | MS.gene93058:CDS |
AGCTTGTCCTGCCTCCAGGA+AGG | 0.607904 | 8.2:-32698168 | None:intergenic |
CTTGAAAACTTACAGAGAGG+TGG | 0.612402 | 8.2:-32698218 | None:intergenic |
CCGATGAAGAAAGGATCAGT+AGG | 0.612768 | 8.2:+32697967 | MS.gene93058:CDS |
AGCCAGCACATGGAAGGCAA+TGG | 0.615743 | 8.2:+32698023 | MS.gene93058:CDS |
AGTCTATGGCAACGAGAAGG+AGG | 0.620984 | 8.2:+32696558 | MS.gene93058:CDS |
CAGCGACGGCTTGAGCGACG+AGG | 0.621876 | 8.2:-32696382 | None:intergenic |
CCAAGAGTACAAATGAAGCA+AGG | 0.630543 | 8.2:+32698553 | MS.gene93058:CDS |
TCAAGTCTATGGCAACGAGA+AGG | 0.639421 | 8.2:+32696555 | MS.gene93058:CDS |
AAAGTCCTGTCCAATGCTAG+TGG | 0.640693 | 8.2:-32697044 | None:intergenic |
CTGCCAGGTACCTAAGCCGA+CGG | 0.641497 | 8.2:-32696348 | None:intergenic |
GGAGCCAAGATCCCTTCCGT+CGG | 0.642083 | 8.2:+32696332 | MS.gene93058:CDS |
AACCTAACTTAGCCAGCACA+TGG | 0.643347 | 8.2:+32698013 | MS.gene93058:CDS |
CATGAACAAATGAGGCACCC+CGG | 0.643553 | 8.2:-32699029 | None:intergenic |
CTTGAGCACAATCAATGTGA+CGG | 0.651757 | 8.2:-32696537 | None:intergenic |
GTTGTTCCAGGGGAACCCAA+AGG | 0.652449 | 8.2:-32698411 | None:intergenic |
AGGTACCTAAGCCGACGGAA+GGG | 0.654265 | 8.2:-32696343 | None:intergenic |
AACACTCTATGACTCAGGCA+AGG | 0.656592 | 8.2:+32698047 | MS.gene93058:CDS |
TTTCTCTTCCAAGAAGTTGG+GGG | 0.662698 | 8.2:+32698092 | MS.gene93058:CDS |
TCTGTTGAAGAACTTTGGGA+TGG | 0.686727 | 8.2:+32699072 | MS.gene93058:CDS |
GCTCAGGTATCTCTTCGCTG+GGG | 0.724205 | 8.2:+32698504 | MS.gene93058:CDS |
TGGAATGCCATCCTTCCTGG+AGG | 0.726179 | 8.2:+32698157 | MS.gene93058:CDS |
GAGGTGGTGAACCTTGATGG+CGG | 0.754872 | 8.2:-32696405 | None:intergenic |
TTTCAGGCAAGATTACTCCG+GGG | 0.779869 | 8.2:+32699012 | MS.gene93058:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTAATTATTTAATAATGC+TGG | + | chr8.2:32696780-32696799 | MS.gene93058:intron | 10.0% |
!! | CTTCAAAAATATAATAATAA+TGG | - | chr8.2:32698342-32698361 | None:intergenic | 10.0% |
!!! | CATTATTATTATATTTTTGA+AGG | + | chr8.2:32698340-32698359 | MS.gene93058:intron | 10.0% |
!! | AAATTAATGATCAGATAATT+GGG | - | chr8.2:32697190-32697209 | None:intergenic | 15.0% |
!! | TAATTAAATTAGCTAAAACA+TGG | - | chr8.2:32696769-32696788 | None:intergenic | 15.0% |
!!! | AAAATTTTGATGTTTTTGAT+TGG | + | chr8.2:32698583-32698602 | MS.gene93058:CDS | 15.0% |
!!! | AAATTTTGATGTTTTTGATT+GGG | + | chr8.2:32698584-32698603 | MS.gene93058:CDS | 15.0% |
!!! | ATTTTCAATTTAAACTTTGA+AGG | - | chr8.2:32697213-32697232 | None:intergenic | 15.0% |
!!! | ATTTTCTCTAATTTAAAATG+TGG | + | chr8.2:32698363-32698382 | MS.gene93058:intron | 15.0% |
!!! | TTATTTCAAGTTTTAACAAA+CGG | - | chr8.2:32698318-32698337 | None:intergenic | 15.0% |
!!! | TTTCATGATATTTTTTTTAG+AGG | + | chr8.2:32698285-32698304 | MS.gene93058:intron | 15.0% |
!! | GAAATTAATGATCAGATAAT+TGG | - | chr8.2:32697191-32697210 | None:intergenic | 20.0% |
!!! | AATTTTGAATCTATTACCTA+AGG | + | chr8.2:32696970-32696989 | MS.gene93058:intron | 20.0% |
!!! | ATAAGAATAAGACTTGATTT+TGG | + | chr8.2:32698791-32698810 | MS.gene93058:intron | 20.0% |
!!! | ATTTTGAATCTATTACCTAA+GGG | + | chr8.2:32696971-32696990 | MS.gene93058:intron | 20.0% |
!!! | CAATCATTTTGATATATTAC+AGG | + | chr8.2:32696507-32696526 | MS.gene93058:intron | 20.0% |
!!! | TATAAGTGCTTTTAATTCTA+AGG | + | chr8.2:32697753-32697772 | MS.gene93058:intron | 20.0% |
! | ATAAGTTTCATGAACAAATG+AGG | - | chr8.2:32699040-32699059 | None:intergenic | 25.0% |
! | ATTGAGAAACTCTAATTTGA+AGG | - | chr8.2:32697564-32697583 | None:intergenic | 25.0% |
! | CTTATTTATAGCTGATAACA+TGG | - | chr8.2:32698776-32698795 | None:intergenic | 25.0% |
! | GTTAAACAATTTCTTCAACA+TGG | - | chr8.2:32696673-32696692 | None:intergenic | 25.0% |
! | TCATTTGTTCATGAAACTTA+TGG | + | chr8.2:32699039-32699058 | MS.gene93058:CDS | 25.0% |
! | TTCATAACTAAAAGACTACA+TGG | - | chr8.2:32697272-32697291 | None:intergenic | 25.0% |
! | TTGAAGAAATTGTTTAACGA+AGG | + | chr8.2:32696675-32696694 | MS.gene93058:CDS | 25.0% |
! | TTTCATCTGATTGCAAAATT+TGG | + | chr8.2:32697870-32697889 | MS.gene93058:intron | 25.0% |
! | TTTGACAGTATGAATCTATA+AGG | + | chr8.2:32698928-32698947 | MS.gene93058:intron | 25.0% |
!! | ATGTGGTACTTTTAATGTTT+AGG | + | chr8.2:32698380-32698399 | MS.gene93058:intron | 25.0% |
!! | TATTTTCCCTCTAATGTTTT+GGG | + | chr8.2:32698850-32698869 | MS.gene93058:intron | 25.0% |
!! | TGTGGTACTTTTAATGTTTA+GGG | + | chr8.2:32698381-32698400 | MS.gene93058:intron | 25.0% |
!!! | TAAATTTTCTGAGATTCAAC+AGG | + | chr8.2:32698629-32698648 | MS.gene93058:CDS | 25.0% |
!!! | TTTGGGTTAGCAATATTAAT+TGG | - | chr8.2:32698828-32698847 | None:intergenic | 25.0% |
!!! | TTTTTTTCTGCACATTACAT+TGG | + | chr8.2:32698258-32698277 | MS.gene93058:intron | 25.0% |
AACTAAAAGACTACATGGAA+AGG | - | chr8.2:32697267-32697286 | None:intergenic | 30.0% | |
AATTTAGCAAACAAGTCTTC+AGG | - | chr8.2:32698615-32698634 | None:intergenic | 30.0% | |
AATTTCTCTTCCAAGAAGTT+GGG | + | chr8.2:32698090-32698109 | MS.gene93058:CDS | 30.0% | |
ACCTAATTTCTCCATCTATA+TGG | + | chr8.2:32697586-32697605 | MS.gene93058:intron | 30.0% | |
ACTGTCAAAAAACTAGTAAC+AGG | - | chr8.2:32698917-32698936 | None:intergenic | 30.0% | |
AGGAAAAATCATGTTGTACA+CGG | + | chr8.2:32697335-32697354 | MS.gene93058:intron | 30.0% | |
ATGTGACACTTAATATGAGA+CGG | - | chr8.2:32697465-32697484 | None:intergenic | 30.0% | |
ATTAGAGGGAAAATAGGTTT+GGG | - | chr8.2:32698845-32698864 | None:intergenic | 30.0% | |
CAAAACATTAGAGGGAAAAT+AGG | - | chr8.2:32698851-32698870 | None:intergenic | 30.0% | |
CAGTTCTTAATATGATTGCT+GGG | + | chr8.2:32698463-32698482 | MS.gene93058:CDS | 30.0% | |
CCTAATTTCTCCATCTATAT+GGG | + | chr8.2:32697587-32697606 | MS.gene93058:intron | 30.0% | |
TAAATCTTACATGCATCAGA+AGG | - | chr8.2:32697850-32697869 | None:intergenic | 30.0% | |
TCATTCTTTCTGTTGTAGAT+TGG | + | chr8.2:32696645-32696664 | MS.gene93058:intron | 30.0% | |
TTGTCAAATGCATGATTGTT+TGG | + | chr8.2:32697375-32697394 | MS.gene93058:intron | 30.0% | |
TTTAATAATGCTGGTAGAAG+AGG | + | chr8.2:32696789-32696808 | MS.gene93058:intron | 30.0% | |
TTTATAGCTGATAACATGGA+AGG | - | chr8.2:32698772-32698791 | None:intergenic | 30.0% | |
TTTGTTCATGAAACTTATGG+TGG | + | chr8.2:32699042-32699061 | MS.gene93058:CDS | 30.0% | |
! | AAACGACATTTAAGATGAGA+TGG | + | chr8.2:32697688-32697707 | MS.gene93058:intron | 30.0% |
! | ACTTTTCTTACATAGCAACA+TGG | + | chr8.2:32697431-32697450 | MS.gene93058:intron | 30.0% |
! | ATTTTCCCTCTAATGTTTTG+GGG | + | chr8.2:32698851-32698870 | MS.gene93058:intron | 30.0% |
! | CTATTTTCCCTCTAATGTTT+TGG | + | chr8.2:32698849-32698868 | MS.gene93058:intron | 30.0% |
!! | CATTTTGATATATTACAGGC+TGG | + | chr8.2:32696511-32696530 | MS.gene93058:intron | 30.0% |
!! | CTTTTAGTTATGAAATTGCG+AGG | + | chr8.2:32697278-32697297 | MS.gene93058:intron | 30.0% |
!!! | CACTGCATTTTTTTTACTGT+AGG | + | chr8.2:32697315-32697334 | MS.gene93058:intron | 30.0% |
AAAACTGGACAATGTTTCCA+TGG | - | chr8.2:32698973-32698992 | None:intergenic | 35.0% | |
AAAAGCCACTGTCATAAAAC+TGG | - | chr8.2:32698988-32699007 | None:intergenic | 35.0% | |
AATATGATTGCTGGGAAACT+AGG | + | chr8.2:32698471-32698490 | MS.gene93058:CDS | 35.0% | |
ACAGATCTGTTGAAGAACTT+TGG | + | chr8.2:32699067-32699086 | MS.gene93058:CDS | 35.0% | |
AGACTTGAAAACTTACAGAG+AGG | - | chr8.2:32698224-32698243 | None:intergenic | 35.0% | |
ATTGATTGTGCTCAAGTCTA+TGG | + | chr8.2:32696544-32696563 | MS.gene93058:CDS | 35.0% | |
ATTTCTCTTCCAAGAAGTTG+GGG | + | chr8.2:32698091-32698110 | MS.gene93058:CDS | 35.0% | |
CAATTTCTCTTCCAAGAAGT+TGG | + | chr8.2:32698089-32698108 | MS.gene93058:CDS | 35.0% | |
CAGATCTGTTGAAGAACTTT+GGG | + | chr8.2:32699068-32699087 | MS.gene93058:CDS | 35.0% | |
CATCTGATTGCAAAATTTGG+TGG | + | chr8.2:32697873-32697892 | MS.gene93058:intron | 35.0% | |
CATTAGAGGGAAAATAGGTT+TGG | - | chr8.2:32698846-32698865 | None:intergenic | 35.0% | |
CCAGCAATCATATTAAGAAC+TGG | - | chr8.2:32698465-32698484 | None:intergenic | 35.0% | |
CCAGTTCTTAATATGATTGC+TGG | + | chr8.2:32698462-32698481 | MS.gene93058:CDS | 35.0% | |
CCCATATAGATGGAGAAATT+AGG | - | chr8.2:32697590-32697609 | None:intergenic | 35.0% | |
CGTGATTTCTGTAATTCCAA+AGG | + | chr8.2:32698192-32698211 | MS.gene93058:CDS | 35.0% | |
CTTAAAACCAGAAAGACCAA+GGG | - | chr8.2:32698673-32698692 | None:intergenic | 35.0% | |
CTTGCTTCATTTGTACTCTT+GGG | - | chr8.2:32698555-32698574 | None:intergenic | 35.0% | |
GAAGTTCTTCTTTACTTCCA+TGG | + | chr8.2:32698953-32698972 | MS.gene93058:intron | 35.0% | |
GTTTAGGGATATTCACCTTT+GGG | + | chr8.2:32698396-32698415 | MS.gene93058:intron | 35.0% | |
TACATGGAAAGGATGTTTCT+TGG | - | chr8.2:32697256-32697275 | None:intergenic | 35.0% | |
TAGTGAAACGCGAAGATTTA+TGG | + | chr8.2:32696700-32696719 | MS.gene93058:CDS | 35.0% | |
TCAACAGGTAAAATGCTTGA+TGG | + | chr8.2:32698644-32698663 | MS.gene93058:intron | 35.0% | |
TCTTAAAACCAGAAAGACCA+AGG | - | chr8.2:32698674-32698693 | None:intergenic | 35.0% | |
TGAAACAAACCAGAGTTTAG+AGG | - | chr8.2:32696730-32696749 | None:intergenic | 35.0% | |
TGACATAATTCCACTTGTGT+CGG | - | chr8.2:32696874-32696893 | None:intergenic | 35.0% | |
TGTGACACTTAATATGAGAC+GGG | - | chr8.2:32697464-32697483 | None:intergenic | 35.0% | |
TGTTTAGGGATATTCACCTT+TGG | + | chr8.2:32698395-32698414 | MS.gene93058:intron | 35.0% | |
! | ACAGTGGCTTTTATTGTTTC+AGG | + | chr8.2:32698996-32699015 | MS.gene93058:intron | 35.0% |
! | CACTAAAGTACCCATATAGA+TGG | - | chr8.2:32697600-32697619 | None:intergenic | 35.0% |
! | GACATTTAAGATGAGATGGA+GGG | + | chr8.2:32697692-32697711 | MS.gene93058:intron | 35.0% |
! | TATGGATTACCTCTAAACTC+TGG | + | chr8.2:32696718-32696737 | MS.gene93058:CDS | 35.0% |
! | TTTAAGATGATGTGCACTTC+AGG | + | chr8.2:32696994-32697013 | MS.gene93058:intron | 35.0% |
!! | ATTGTCCAGTTTTATGACAG+TGG | + | chr8.2:32698980-32698999 | MS.gene93058:intron | 35.0% |
AAATCATGTTGTACACGGCT+TGG | + | chr8.2:32697340-32697359 | MS.gene93058:intron | 40.0% | |
AATGCTAGTGGTACATCTTC+TGG | - | chr8.2:32697035-32697054 | None:intergenic | 40.0% | |
AGAAGATGTACCACTAGCAT+TGG | + | chr8.2:32697034-32697053 | MS.gene93058:CDS | 40.0% | |
ATGAATCAGAGACACAGACA+AGG | - | chr8.2:32696950-32696969 | None:intergenic | 40.0% | |
ATGGAAACACTCTATGACTC+AGG | + | chr8.2:32698042-32698061 | MS.gene93058:CDS | 40.0% | |
CACTACACACATTCAATCAG+AGG | - | chr8.2:32696844-32696863 | None:intergenic | 40.0% | |
CCTACTGATCCTTTCTTCAT+CGG | - | chr8.2:32697970-32697989 | None:intergenic | 40.0% | |
CCTTGCTTCATTTGTACTCT+TGG | - | chr8.2:32698556-32698575 | None:intergenic | 40.0% | |
CGATTCTTCAATCTCAACAC+CGG | + | chr8.2:32696311-32696330 | MS.gene93058:CDS | 40.0% | |
CTTGAAAACTTACAGAGAGG+TGG | - | chr8.2:32698221-32698240 | None:intergenic | 40.0% | |
CTTGAGCACAATCAATGTGA+CGG | - | chr8.2:32696540-32696559 | None:intergenic | 40.0% | |
GCACATCATCTTAAACCCTT+AGG | - | chr8.2:32696989-32697008 | None:intergenic | 40.0% | |
TCCATCCCCAAAACATTAGA+GGG | - | chr8.2:32698859-32698878 | None:intergenic | 40.0% | |
TGTGCATGTGTAAATCGATG+AGG | - | chr8.2:32696427-32696446 | None:intergenic | 40.0% | |
TGTTTCAGGCAAGATTACTC+CGG | + | chr8.2:32699010-32699029 | MS.gene93058:intron | 40.0% | |
TTATAGTCGTCAAGTCTGCA+AGG | - | chr8.2:32697738-32697757 | None:intergenic | 40.0% | |
TTTCTCTTCCAAGAAGTTGG+GGG | + | chr8.2:32698092-32698111 | MS.gene93058:CDS | 40.0% | |
! | AAATGCTTGATGGTTTCCCT+TGG | + | chr8.2:32698654-32698673 | MS.gene93058:intron | 40.0% |
! | CCAAGAGTACAAATGAAGCA+AGG | + | chr8.2:32698553-32698572 | MS.gene93058:CDS | 40.0% |
! | CGACATTTAAGATGAGATGG+AGG | + | chr8.2:32697691-32697710 | MS.gene93058:intron | 40.0% |
! | TCTGTTGAAGAACTTTGGGA+TGG | + | chr8.2:32699072-32699091 | MS.gene93058:CDS | 40.0% |
! | TTCTTCTTTTGCAGATCCAC+TGG | + | chr8.2:32697938-32697957 | MS.gene93058:intron | 40.0% |
!! | AATGACATCACTTTGAAGCC+AGG | - | chr8.2:32698436-32698455 | None:intergenic | 40.0% |
AAAGTCCTGTCCAATGCTAG+TGG | - | chr8.2:32697047-32697066 | None:intergenic | 45.0% | |
AACACTCTATGACTCAGGCA+AGG | + | chr8.2:32698047-32698066 | MS.gene93058:CDS | 45.0% | |
AACCTAACTTAGCCAGCACA+TGG | + | chr8.2:32698013-32698032 | MS.gene93058:CDS | 45.0% | |
CAGCATATGCTGCATTGCTT+GGG | + | chr8.2:32697793-32697812 | MS.gene93058:intron | 45.0% | |
CATTCCACTTGATTGACAGC+AGG | - | chr8.2:32698144-32698163 | None:intergenic | 45.0% | |
CCGATGAAGAAAGGATCAGT+AGG | + | chr8.2:32697967-32697986 | MS.gene93058:CDS | 45.0% | |
CTCCATCCCCAAAACATTAG+AGG | - | chr8.2:32698860-32698879 | None:intergenic | 45.0% | |
GCATGTGTAAATCGATGAGG+TGG | - | chr8.2:32696424-32696443 | None:intergenic | 45.0% | |
GTTTCAGGCAAGATTACTCC+GGG | + | chr8.2:32699011-32699030 | MS.gene93058:intron | 45.0% | |
TAACTTAGCCAGCACATGGA+AGG | + | chr8.2:32698017-32698036 | MS.gene93058:CDS | 45.0% | |
TCAAGTCTATGGCAACGAGA+AGG | + | chr8.2:32696555-32696574 | MS.gene93058:CDS | 45.0% | |
TTTCAGGCAAGATTACTCCG+GGG | + | chr8.2:32699012-32699031 | MS.gene93058:intron | 45.0% | |
! | ATGGTTTCCCTTGGTCTTTC+TGG | + | chr8.2:32698663-32698682 | MS.gene93058:intron | 45.0% |
! | ATGTACCACTAGCATTGGAC+AGG | + | chr8.2:32697039-32697058 | MS.gene93058:CDS | 45.0% |
! | TTTGAAGCCAGGTTGTTCCA+GGG | - | chr8.2:32698425-32698444 | None:intergenic | 45.0% |
!! | GTGTCAGTGTTTGTTGTGTC+CGG | + | chr8.2:32696921-32696940 | MS.gene93058:intron | 45.0% |
!! | TTCCATGTGCTGGCTAAGTT+AGG | - | chr8.2:32698018-32698037 | None:intergenic | 45.0% |
!!! | ATGTTTTGGGGATGGAGAGT+TGG | + | chr8.2:32698863-32698882 | MS.gene93058:intron | 45.0% |
!!! | TCCCTCTAATGTTTTGGGGA+TGG | + | chr8.2:32698855-32698874 | MS.gene93058:intron | 45.0% |
!!! | TCATTTTTTAAAATTATTAT+TGG | + | chr8.2:32696891-32696910 | MS.gene93058:intron | 5.0% |
AAGTGGAATGCCATCCTTCC+TGG | + | chr8.2:32698154-32698173 | MS.gene93058:CDS | 50.0% | |
AGAGACACAGACAAGGACAC+CGG | - | chr8.2:32696943-32696962 | None:intergenic | 50.0% | |
AGTCTATGGCAACGAGAAGG+AGG | + | chr8.2:32696558-32696577 | MS.gene93058:CDS | 50.0% | |
CCAAGCAATGCAGCATATGC+TGG | - | chr8.2:32697795-32697814 | None:intergenic | 50.0% | |
CCAGCATATGCTGCATTGCT+TGG | + | chr8.2:32697792-32697811 | MS.gene93058:intron | 50.0% | |
CTTCGCTGGGGATTGCAAAT+GGG | + | chr8.2:32698516-32698535 | MS.gene93058:CDS | 50.0% | |
GAGCAAATCCCCCAACTTCT+TGG | - | chr8.2:32698103-32698122 | None:intergenic | 50.0% | |
GATCCTTTCTTCATCGGAGC+AGG | - | chr8.2:32697964-32697983 | None:intergenic | 50.0% | |
GATGAGGTGGTGAACCTTGA+TGG | - | chr8.2:32696411-32696430 | None:intergenic | 50.0% | |
GTGTCTAACACCGACACAAG+TGG | + | chr8.2:32696861-32696880 | MS.gene93058:intron | 50.0% | |
TACAGAGAGGTGGACACCTT+TGG | - | chr8.2:32698211-32698230 | None:intergenic | 50.0% | |
TCCACTTGATTGACAGCAGG+AGG | - | chr8.2:32698141-32698160 | None:intergenic | 50.0% | |
TCCTCCTGCTGTCAATCAAG+TGG | + | chr8.2:32698137-32698156 | MS.gene93058:CDS | 50.0% | |
TCTATGACTCAGGCAAGGCA+CGG | + | chr8.2:32698052-32698071 | MS.gene93058:CDS | 50.0% | |
TCTTCGCTGGGGATTGCAAA+TGG | + | chr8.2:32698515-32698534 | MS.gene93058:CDS | 50.0% | |
TGCTCAGGTATCTCTTCGCT+GGG | + | chr8.2:32698503-32698522 | MS.gene93058:CDS | 50.0% | |
TTCCATTGCCTTCCATGTGC+TGG | - | chr8.2:32698028-32698047 | None:intergenic | 50.0% | |
TTGAAGCCAGGTTGTTCCAG+GGG | - | chr8.2:32698424-32698443 | None:intergenic | 50.0% | |
! | CATGAACAAATGAGGCACCC+CGG | - | chr8.2:32699032-32699051 | None:intergenic | 50.0% |
! | TATTCACCTTTGGGTTCCCC+TGG | + | chr8.2:32698405-32698424 | MS.gene93058:CDS | 50.0% |
!! | CTTTGAAGCCAGGTTGTTCC+AGG | - | chr8.2:32698426-32698445 | None:intergenic | 50.0% |
ACTAGGCAAGACTCCTGCTC+AGG | + | chr8.2:32698488-32698507 | MS.gene93058:CDS | 55.0% | |
AGCCAGCACATGGAAGGCAA+TGG | + | chr8.2:32698023-32698042 | MS.gene93058:CDS | 55.0% | |
AGGTACCTAAGCCGACGGAA+GGG | - | chr8.2:32696346-32696365 | None:intergenic | 55.0% | |
CAGCGAAGAGATACCTGAGC+AGG | - | chr8.2:32698504-32698523 | None:intergenic | 55.0% | |
CTATGACTCAGGCAAGGCAC+GGG | + | chr8.2:32698053-32698072 | MS.gene93058:CDS | 55.0% | |
CTGCTCAGGTATCTCTTCGC+TGG | + | chr8.2:32698502-32698521 | MS.gene93058:CDS | 55.0% | |
GAGGTGGTGAACCTTGATGG+CGG | - | chr8.2:32696408-32696427 | None:intergenic | 55.0% | |
GCTCAGGTATCTCTTCGCTG+GGG | + | chr8.2:32698504-32698523 | MS.gene93058:CDS | 55.0% | |
GTTGTTCCAGGGGAACCCAA+AGG | - | chr8.2:32698414-32698433 | None:intergenic | 55.0% | |
TAAGCCGACGGAAGGGATCT+TGG | - | chr8.2:32696339-32696358 | None:intergenic | 55.0% | |
TGGAATGCCATCCTTCCTGG+AGG | + | chr8.2:32698157-32698176 | MS.gene93058:CDS | 55.0% | |
TGGCCTGCTCCGATGAAGAA+AGG | + | chr8.2:32697958-32697977 | MS.gene93058:CDS | 55.0% | |
! | GAAGTTGGGGGATTTGCTCG+AGG | + | chr8.2:32698104-32698123 | MS.gene93058:CDS | 55.0% |
!! | AAGATCCCTTCCGTCGGCTT+AGG | + | chr8.2:32696338-32696357 | MS.gene93058:CDS | 55.0% |
AGCTTGTCCTGCCTCCAGGA+AGG | - | chr8.2:32698171-32698190 | None:intergenic | 60.0% | |
ATGCCATCCTTCCTGGAGGC+AGG | + | chr8.2:32698161-32698180 | MS.gene93058:CDS | 60.0% | |
CAGGTACCTAAGCCGACGGA+AGG | - | chr8.2:32696347-32696366 | None:intergenic | 60.0% | |
CTGCCAGGTACCTAAGCCGA+CGG | - | chr8.2:32696351-32696370 | None:intergenic | 60.0% | |
GACGGAAGGGATCTTGGCTC+CGG | - | chr8.2:32696333-32696352 | None:intergenic | 60.0% | |
GGAGCCAAGATCCCTTCCGT+CGG | + | chr8.2:32696332-32696351 | MS.gene93058:CDS | 60.0% | |
TCTTCATCGGAGCAGGCCAG+TGG | - | chr8.2:32697957-32697976 | None:intergenic | 60.0% | |
TGGGTTCCCCTGGAACAACC+TGG | + | chr8.2:32698415-32698434 | MS.gene93058:CDS | 60.0% | |
TGTCCTGCCTCCAGGAAGGA+TGG | - | chr8.2:32698167-32698186 | None:intergenic | 60.0% | |
TTGAGCGACGAGGCCAGGAT+CGG | - | chr8.2:32696375-32696394 | None:intergenic | 60.0% | |
! | TCAGGCAAGGCACGGGCTAT+AGG | + | chr8.2:32698060-32698079 | MS.gene93058:CDS | 60.0% |
!! | AACCTTGATGGCGGCAGCGA+CGG | - | chr8.2:32696399-32696418 | None:intergenic | 60.0% |
!! | CTTCCGTCGGCTTAGGTACC+TGG | + | chr8.2:32696345-32696364 | MS.gene93058:CDS | 60.0% |
ACGCAGCTTGTCCTGCCTCC+AGG | - | chr8.2:32698175-32698194 | None:intergenic | 65.0% | |
GGTACCTGGCAGTCCGATCC+TGG | + | chr8.2:32696359-32696378 | MS.gene93058:CDS | 65.0% | |
ACGGCTTGAGCGACGAGGCC+AGG | - | chr8.2:32696380-32696399 | None:intergenic | 70.0% | |
AGCCGTCGCTGCCGCCATCA+AGG | + | chr8.2:32696394-32696413 | MS.gene93058:CDS | 70.0% | |
CAGCGACGGCTTGAGCGACG+AGG | - | chr8.2:32696385-32696404 | None:intergenic | 70.0% | |
GAGGCCAGGATCGGACTGCC+AGG | - | chr8.2:32696366-32696385 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 32696296 | 32699104 | 32696296 | ID=MS.gene93058 |
chr8.2 | mRNA | 32696296 | 32699104 | 32696296 | ID=MS.gene93058.t1;Parent=MS.gene93058 |
chr8.2 | exon | 32696296 | 32696415 | 32696296 | ID=MS.gene93058.t1.exon1;Parent=MS.gene93058.t1 |
chr8.2 | CDS | 32696296 | 32696415 | 32696296 | ID=cds.MS.gene93058.t1;Parent=MS.gene93058.t1 |
chr8.2 | exon | 32696529 | 32696579 | 32696529 | ID=MS.gene93058.t1.exon2;Parent=MS.gene93058.t1 |
chr8.2 | CDS | 32696529 | 32696579 | 32696529 | ID=cds.MS.gene93058.t1;Parent=MS.gene93058.t1 |
chr8.2 | exon | 32696663 | 32696739 | 32696663 | ID=MS.gene93058.t1.exon3;Parent=MS.gene93058.t1 |
chr8.2 | CDS | 32696663 | 32696739 | 32696663 | ID=cds.MS.gene93058.t1;Parent=MS.gene93058.t1 |
chr8.2 | exon | 32697016 | 32697103 | 32697016 | ID=MS.gene93058.t1.exon4;Parent=MS.gene93058.t1 |
chr8.2 | CDS | 32697016 | 32697103 | 32697016 | ID=cds.MS.gene93058.t1;Parent=MS.gene93058.t1 |
chr8.2 | exon | 32697952 | 32698227 | 32697952 | ID=MS.gene93058.t1.exon5;Parent=MS.gene93058.t1 |
chr8.2 | CDS | 32697952 | 32698227 | 32697952 | ID=cds.MS.gene93058.t1;Parent=MS.gene93058.t1 |
chr8.2 | exon | 32698402 | 32698650 | 32698402 | ID=MS.gene93058.t1.exon6;Parent=MS.gene93058.t1 |
chr8.2 | CDS | 32698402 | 32698650 | 32698402 | ID=cds.MS.gene93058.t1;Parent=MS.gene93058.t1 |
chr8.2 | exon | 32699018 | 32699104 | 32699018 | ID=MS.gene93058.t1.exon7;Parent=MS.gene93058.t1 |
chr8.2 | CDS | 32699018 | 32699104 | 32699018 | ID=cds.MS.gene93058.t1;Parent=MS.gene93058.t1 |
Gene Sequence |
Protein sequence |